Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06213.t1 | XP_024635253.1 | 94.4 | 890 | 40 | 2 | 1 | 881 | 1 | 889 | 0.00E+00 | 1763.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06213.t1 | Q9M9E8 | 59.2 | 877 | 304 | 12 | 11 | 871 | 6 | 844 | 0.0e+00 | 1083.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06213.t1 | G7J3X8 | 95.2 | 881 | 32 | 2 | 1 | 872 | 1 | 880 | 0.0e+00 | 1761.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene06213.t1 | TR | Jumonji |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06213.t1 | MTR_3g099370 | 95.233 | 881 | 32 | 2 | 1 | 872 | 1 | 880 | 0.0 | 1701 |
| MS.gene06213.t1 | MTR_7g106990 | 38.904 | 365 | 210 | 8 | 11 | 372 | 87 | 441 | 1.11e-75 | 254 |
| MS.gene06213.t1 | MTR_3g077420 | 22.333 | 300 | 162 | 11 | 136 | 379 | 16 | 300 | 8.00e-11 | 64.7 |
| MS.gene06213.t1 | MTR_3g077420 | 22.333 | 300 | 162 | 11 | 136 | 379 | 16 | 300 | 9.29e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06213.t1 | AT1G78280 | 59.179 | 877 | 304 | 12 | 11 | 871 | 6 | 844 | 0.0 | 1047 |
| MS.gene06213.t1 | AT5G06550 | 37.875 | 367 | 215 | 8 | 12 | 376 | 73 | 428 | 8.12e-75 | 254 |
| MS.gene06213.t1 | AT5G63080 | 25.623 | 281 | 167 | 9 | 133 | 379 | 7 | 279 | 7.55e-19 | 90.9 |
Find 205 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTTCTTTGTTAAGATTC+TGG | 0.145954 | 3.3:-81751616 | None:intergenic |
| GCATGGAATACTCTTCTTTC+TGG | 0.157901 | 3.3:+81747594 | MS.gene06213:CDS |
| TGATTTCAGTGATCTTTCTA+TGG | 0.200906 | 3.3:+81752395 | MS.gene06213:CDS |
| GTCTACATCTTTCAGAGTTT+TGG | 0.213866 | 3.3:-81749345 | None:intergenic |
| GGACTGGAAGCATCGCTTTA+TGG | 0.213881 | 3.3:+81750849 | MS.gene06213:CDS |
| CATCCAGAAGCTATAATTTA+TGG | 0.214640 | 3.3:+81749399 | MS.gene06213:CDS |
| GATATAAATGAATTATTTAA+AGG | 0.220719 | 3.3:-81751498 | None:intergenic |
| CGAATTTGTATGTTTGGATA+TGG | 0.225637 | 3.3:+81749181 | MS.gene06213:CDS |
| CTCTTCTTTCTGGCCGTAAA+AGG | 0.234128 | 3.3:+81747604 | MS.gene06213:CDS |
| TCCTATAGGTGGCTTATAAT+TGG | 0.239011 | 3.3:+81747522 | MS.gene06213:CDS |
| CACCCTCAGGTCATGCTAAA+TGG | 0.250190 | 3.3:+81747091 | MS.gene06213:intron |
| CATATTAGATCTCTCATATC+TGG | 0.253644 | 3.3:-81749566 | None:intergenic |
| ACGTGGATGGTTTCCCGTTT+GGG | 0.269531 | 3.3:+81751131 | MS.gene06213:CDS |
| TTGGATACACACTGACATTA+TGG | 0.277456 | 3.3:+81752239 | MS.gene06213:CDS |
| AACATACTTGGCCTCCTTCC+TGG | 0.278108 | 3.3:+81751437 | MS.gene06213:CDS |
| TAACTTCGAATTTGTATGTT+TGG | 0.284606 | 3.3:+81749175 | MS.gene06213:CDS |
| TTGTTTGAGTATAGGAATAC+TGG | 0.294582 | 3.3:+81751169 | MS.gene06213:CDS |
| TCAATCAGTTTGCTAGGAAT+TGG | 0.295536 | 3.3:-81752029 | None:intergenic |
| TTTCCATAAATTATAGCTTC+TGG | 0.297974 | 3.3:-81749402 | None:intergenic |
| CTCGCGTCGCTTGCGTTAGC+AGG | 0.300344 | 3.3:+81745321 | MS.gene06213:CDS |
| CAGATATGAGAGATCTAATA+TGG | 0.307979 | 3.3:+81749567 | MS.gene06213:CDS |
| TGGTTTCCCGTTTGGGGTAT+GGG | 0.311759 | 3.3:+81751138 | MS.gene06213:CDS |
| GACATAATCCTTGAACTTCA+TGG | 0.326012 | 3.3:-81747221 | None:intergenic |
| CATCGCTTAATTATCAAATA+TGG | 0.329184 | 3.3:-81751241 | None:intergenic |
| ATGGTTTCCCGTTTGGGGTA+TGG | 0.336226 | 3.3:+81751137 | MS.gene06213:CDS |
| AACGTGGATGGTTTCCCGTT+TGG | 0.339996 | 3.3:+81751130 | MS.gene06213:CDS |
| CATCCATAGTGGTTCTTCAT+TGG | 0.346934 | 3.3:-81745954 | None:intergenic |
| TGGCACTCTTTGTACTTCTC+TGG | 0.357779 | 3.3:-81746157 | None:intergenic |
| ATCCCAACTTAAATTGGTAT+AGG | 0.361855 | 3.3:-81751053 | None:intergenic |
| GAGAATGGTTGTCCAAGCTT+TGG | 0.365534 | 3.3:+81749534 | MS.gene06213:CDS |
| GATCAGCTGTTACAAAACTA+TGG | 0.367650 | 3.3:+81747154 | MS.gene06213:CDS |
| GAAAGGCTTCCTGTTGGTTC+GGG | 0.369837 | 3.3:+81749777 | MS.gene06213:CDS |
| TTTCGTCGAAAATATATAAT+GGG | 0.370958 | 3.3:-81747273 | None:intergenic |
| CGAAAGGCTTCCTGTTGGTT+CGG | 0.372369 | 3.3:+81749776 | MS.gene06213:CDS |
| CATGGCCTGCCAGGCAGAAA+TGG | 0.378327 | 3.3:+81747125 | MS.gene06213:CDS |
| AATGTAAAGGCTGCTGTCTA+TGG | 0.380107 | 3.3:-81746177 | None:intergenic |
| ATCAAACAATGCAGCAGAAT+GGG | 0.387429 | 3.3:+81751584 | MS.gene06213:CDS |
| TAGCCGGTAACTCAAGTATA+TGG | 0.392078 | 3.3:+81751218 | MS.gene06213:CDS |
| TGGCCATATACTTGAGTTAC+CGG | 0.392860 | 3.3:-81751221 | None:intergenic |
| ATACCCGTCTTTATTAGAAA+TGG | 0.393170 | 3.3:+81752471 | MS.gene06213:CDS |
| TGGATGACTCTATGCCTAAA+AGG | 0.397240 | 3.3:+81745971 | MS.gene06213:CDS |
| CCTCCTGGAAAAGTGCCTTT+AGG | 0.405897 | 3.3:+81748794 | MS.gene06213:CDS |
| TGCCTAAAAGGAGGAGCATC+TGG | 0.408109 | 3.3:+81745983 | MS.gene06213:CDS |
| GGGCAACAGCATTGGTCAAC+GGG | 0.409974 | 3.3:+81749505 | MS.gene06213:CDS |
| GGTAGTTGTGTACATTCAAT+TGG | 0.411189 | 3.3:-81749059 | None:intergenic |
| ACATACTTGGCCTCCTTCCT+GGG | 0.411835 | 3.3:+81751438 | MS.gene06213:CDS |
| GTATAGGAATACTGGGATTC+CGG | 0.412569 | 3.3:+81751177 | MS.gene06213:CDS |
| GTTGTCCATTTCTGCCTGGC+AGG | 0.425101 | 3.3:-81747130 | None:intergenic |
| GAAACATATTCCTAGTGTTA+TGG | 0.425446 | 3.3:+81751000 | MS.gene06213:CDS |
| CAGGCATTCTAACCACTTGC+CGG | 0.427854 | 3.3:-81749709 | None:intergenic |
| ATATTGAACGTGAATTAAAC+TGG | 0.429371 | 3.3:+81751523 | MS.gene06213:CDS |
| AATCCTATACCAATTTAAGT+TGG | 0.431151 | 3.3:+81751050 | MS.gene06213:CDS |
| TGGCGAATACATGGCCTGCC+AGG | 0.433299 | 3.3:+81747116 | MS.gene06213:CDS |
| GATTTCAGTGATCTTTCTAT+GGG | 0.433748 | 3.3:+81752396 | MS.gene06213:CDS |
| ACGTGCCCCTAGCTTATTGA+AGG | 0.437387 | 3.3:+81747434 | MS.gene06213:CDS |
| GCAAGCAATTGTTTGAGTAT+AGG | 0.439732 | 3.3:+81751161 | MS.gene06213:CDS |
| ATCCTATACCAATTTAAGTT+GGG | 0.441548 | 3.3:+81751051 | MS.gene06213:CDS |
| ATCAGTTGTCCATTTCTGCC+TGG | 0.443048 | 3.3:-81747134 | None:intergenic |
| GAAGCATCGCTTTATGGTTT+AGG | 0.443732 | 3.3:+81750855 | MS.gene06213:CDS |
| CACAGAGATCTGGTGCCTCT+TGG | 0.445712 | 3.3:+81747547 | MS.gene06213:CDS |
| AAAGATCTCCATGAAGTTCA+AGG | 0.447205 | 3.3:+81747213 | MS.gene06213:CDS |
| TGCTTGCCCCATACCCCAAA+CGG | 0.447802 | 3.3:-81751145 | None:intergenic |
| GCACCTGGTTATCGTCATAA+AGG | 0.453039 | 3.3:+81749203 | MS.gene06213:CDS |
| TTCTTCAATACAAAGGCTCT+TGG | 0.456556 | 3.3:+81746008 | MS.gene06213:CDS |
| TATCCAATGAAGAACCACTA+TGG | 0.457458 | 3.3:+81745951 | MS.gene06213:CDS |
| CTGAAATCAAGGAGGTAACT+AGG | 0.465174 | 3.3:-81752381 | None:intergenic |
| GCACTTCTAAACCCTGCTCT+TGG | 0.465947 | 3.3:+81752220 | MS.gene06213:CDS |
| TTCCATGCACTTGTAAGAGC+TGG | 0.466147 | 3.3:-81747579 | None:intergenic |
| TTCCTAGTGTTATGGCCAGT+GGG | 0.468965 | 3.3:+81751008 | MS.gene06213:CDS |
| TAGAAAGATCACTGAAATCA+AGG | 0.469489 | 3.3:-81752392 | None:intergenic |
| GTCAGTGTGTATCCAAGAGC+AGG | 0.469541 | 3.3:-81752232 | None:intergenic |
| AAGTATACCACTTGGTCAAA+CGG | 0.469956 | 3.3:-81751653 | None:intergenic |
| CAGATAAACGACCATCCTAT+AGG | 0.470762 | 3.3:+81747508 | MS.gene06213:CDS |
| CCTTTCGTCATCTGTGGGAG+GGG | 0.475975 | 3.3:-81749760 | None:intergenic |
| TTGAAGCCAACTCCCCTCTC+AGG | 0.479773 | 3.3:+81750978 | MS.gene06213:CDS |
| TCCAATTATAAGCCACCTAT+AGG | 0.486415 | 3.3:-81747523 | None:intergenic |
| TCTAGAACCTGCAGTGATGA+TGG | 0.488244 | 3.3:-81748866 | None:intergenic |
| ATAATTGGACCACAGAGATC+TGG | 0.489173 | 3.3:+81747537 | MS.gene06213:CDS |
| GCCTTTCGTCATCTGTGGGA+GGG | 0.490405 | 3.3:-81749761 | None:intergenic |
| TTATTAGAAATGGCTTACAT+TGG | 0.495955 | 3.3:+81752481 | MS.gene06213:CDS |
| GAATTATTTAAAGGTGGATG+TGG | 0.496530 | 3.3:-81751489 | None:intergenic |
| AATCAAACAATGCAGCAGAA+TGG | 0.499094 | 3.3:+81751583 | MS.gene06213:CDS |
| CAATTTATGTTCCGAGTGGA+TGG | 0.499365 | 3.3:+81749090 | MS.gene06213:CDS |
| GGTTTCCCGTTTGGGGTATG+GGG | 0.499368 | 3.3:+81751139 | MS.gene06213:CDS |
| ACATGCACCGTCACACCTAA+AGG | 0.501322 | 3.3:-81748809 | None:intergenic |
| AGGTGGGCATTATATCCTCC+TGG | 0.509762 | 3.3:+81748779 | MS.gene06213:intron |
| GCTTGCCCCATACCCCAAAC+GGG | 0.510621 | 3.3:-81751144 | None:intergenic |
| ATGTTTCCTGAGAGGGGAGT+TGG | 0.512138 | 3.3:-81750984 | None:intergenic |
| TGGAGCTCGGGCAACAGCAT+TGG | 0.513686 | 3.3:+81749497 | MS.gene06213:CDS |
| TATACCAATTTAAGTTGGGA+TGG | 0.514509 | 3.3:+81751055 | MS.gene06213:CDS |
| TAAATGGACTGGCGAATACA+TGG | 0.516680 | 3.3:+81747107 | MS.gene06213:CDS |
| ATTGAGCAGAGGATTTCATC+GGG | 0.517061 | 3.3:-81745269 | None:intergenic |
| AATTTAAGTTGGGATGGAAA+AGG | 0.517463 | 3.3:+81751061 | MS.gene06213:CDS |
| CAGTAATCCTTCAATAAGCT+AGG | 0.518812 | 3.3:-81747441 | None:intergenic |
| AATTGAGCAGAGGATTTCAT+CGG | 0.521661 | 3.3:-81745270 | None:intergenic |
| AATAAATGACATCTCAATGA+AGG | 0.522634 | 3.3:+81746416 | MS.gene06213:CDS |
| CAAGTATGACATGAAGAAAC+CGG | 0.525208 | 3.3:+81746449 | MS.gene06213:CDS |
| TAAGTTACTCTGATTTGTCA+AGG | 0.527231 | 3.3:+81749309 | MS.gene06213:CDS |
| TTGATAATTAAGCGATGTGA+GGG | 0.528989 | 3.3:+81751247 | MS.gene06213:CDS |
| TAGGAATATGTTTCCTGAGA+GGG | 0.530545 | 3.3:-81750991 | None:intergenic |
| TAAGCCATTTCTAATAAAGA+CGG | 0.532008 | 3.3:-81752475 | None:intergenic |
| CGGGCAACAGCATTGGTCAA+CGG | 0.534919 | 3.3:+81749504 | MS.gene06213:CDS |
| AGGCATAGAGTCATCCATAG+TGG | 0.536115 | 3.3:-81745965 | None:intergenic |
| ATAAATGAATTATTTAAAGG+TGG | 0.536575 | 3.3:-81751495 | None:intergenic |
| TATGGATGATAATATTTACA+TGG | 0.536763 | 3.3:+81752257 | MS.gene06213:CDS |
| ATTGCTCTTCAAAATGACAC+TGG | 0.537117 | 3.3:-81751089 | None:intergenic |
| AGTAATCCTTCAATAAGCTA+GGG | 0.541163 | 3.3:-81747440 | None:intergenic |
| TGTTTGAGTATAGGAATACT+GGG | 0.542687 | 3.3:+81751170 | MS.gene06213:CDS |
| CAAGGATTATGTCTCATACA+TGG | 0.543266 | 3.3:+81747231 | MS.gene06213:CDS |
| GCATGCATTGCACTAAATGC+CGG | 0.547137 | 3.3:+81749690 | MS.gene06213:CDS |
| TAAGCTGCTAAATATAAATG+AGG | 0.548356 | 3.3:+81752085 | MS.gene06213:CDS |
| GGAACATAAATTGTCTCTCC+AGG | 0.550858 | 3.3:-81749080 | None:intergenic |
| AGGAAGCCTTTCGTCATCTG+TGG | 0.551264 | 3.3:-81749766 | None:intergenic |
| AAACTAACTGATCCGTCCGC+CGG | 0.551543 | 3.3:-81751196 | None:intergenic |
| GATCGCAGAATAGACGCTCT+TGG | 0.552054 | 3.3:+81745230 | MS.gene06213:CDS |
| ATCCAGCTCTTACAAGTGCA+TGG | 0.557351 | 3.3:+81747577 | MS.gene06213:CDS |
| ACCACGTTGGAGTGAAATCC+TGG | 0.558962 | 3.3:+81752355 | MS.gene06213:CDS |
| GACGGATCAGTTAGTTTAGC+CGG | 0.560179 | 3.3:+81751202 | MS.gene06213:CDS |
| GTGGGAAGATACAACATACT+TGG | 0.560604 | 3.3:+81751425 | MS.gene06213:CDS |
| GCGACGCGAGCAGCATCTTG+AGG | 0.560780 | 3.3:-81745308 | None:intergenic |
| GGATTGCTACCCGAACCAAC+AGG | 0.563415 | 3.3:-81749786 | None:intergenic |
| GAGGTAGAGCAAATCGATGA+TGG | 0.564450 | 3.3:-81752282 | None:intergenic |
| TTGCATTTAAAATTTCTCAA+AGG | 0.564534 | 3.3:+81747182 | MS.gene06213:CDS |
| CGTGGATGGTTTCCCGTTTG+GGG | 0.564553 | 3.3:+81751132 | MS.gene06213:CDS |
| TTGTTACCATCAAAATGTAA+AGG | 0.567945 | 3.3:-81746190 | None:intergenic |
| AGAAGCTATAATTTATGGAA+AGG | 0.568532 | 3.3:+81749404 | MS.gene06213:CDS |
| TGAGACTCCATCATCACTGC+AGG | 0.568853 | 3.3:+81748859 | MS.gene06213:CDS |
| CATAAAGGAGTCTGCCGTGT+GGG | 0.569358 | 3.3:+81749218 | MS.gene06213:CDS |
| CCAGAATCTTAACAAAGAAG+AGG | 0.570253 | 3.3:+81751616 | MS.gene06213:CDS |
| AGCCTTTCGTCATCTGTGGG+AGG | 0.570411 | 3.3:-81749762 | None:intergenic |
| ACCCCACTGGCCATAACACT+AGG | 0.575861 | 3.3:-81751010 | None:intergenic |
| TCAGGTCATGCTAAATGGAC+TGG | 0.577021 | 3.3:+81747096 | MS.gene06213:intron |
| AGCATCTTCTGTATTCCCAC+TGG | 0.577196 | 3.3:-81752304 | None:intergenic |
| AGCTATAATTTATGGAAAGG+TGG | 0.579530 | 3.3:+81749407 | MS.gene06213:CDS |
| ATTCCTAGTGTTATGGCCAG+TGG | 0.580711 | 3.3:+81751007 | MS.gene06213:CDS |
| TCTCAAGCCGTTTGACCAAG+TGG | 0.584548 | 3.3:+81751646 | MS.gene06213:CDS |
| CTTTCGTCATCTGTGGGAGG+GGG | 0.587951 | 3.3:-81749759 | None:intergenic |
| TCCTAGTGTTATGGCCAGTG+GGG | 0.588471 | 3.3:+81751009 | MS.gene06213:CDS |
| AATACTGGGATTCCGGCGGA+CGG | 0.589838 | 3.3:+81751184 | MS.gene06213:CDS |
| AAGCCATTTCTAATAAAGAC+GGG | 0.590411 | 3.3:-81752474 | None:intergenic |
| GTCAACGGGAACTAAGAGAA+TGG | 0.591171 | 3.3:+81749519 | MS.gene06213:CDS |
| AGCAGCTTAGATAAATCAGA+TGG | 0.592390 | 3.3:-81752071 | None:intergenic |
| TTTGATAATTAAGCGATGTG+AGG | 0.594501 | 3.3:+81751246 | MS.gene06213:CDS |
| TCGATTTGCTCTACCTCCAG+TGG | 0.595230 | 3.3:+81752288 | MS.gene06213:CDS |
| TTAAACTGGTCTGAGGTGAA+TGG | 0.595295 | 3.3:+81751537 | MS.gene06213:CDS |
| ACAGAGAAATGCAACGTGGA+TGG | 0.595885 | 3.3:+81751118 | MS.gene06213:CDS |
| ATCTTCTGTATTCCCACTGG+AGG | 0.600340 | 3.3:-81752301 | None:intergenic |
| TATGAGAGATCTAATATGGA+AGG | 0.601472 | 3.3:+81749571 | MS.gene06213:CDS |
| TGACTTCAGAATTTCTCAAG+TGG | 0.604991 | 3.3:+81752198 | MS.gene06213:intron |
| AATCTTAACAAAGAAGAGGA+AGG | 0.605956 | 3.3:+81751620 | MS.gene06213:CDS |
| AATACAGAAGATGCTGCCGA+GGG | 0.606356 | 3.3:+81752312 | MS.gene06213:CDS |
| GTATGTTTGGATATGGCACC+TGG | 0.607998 | 3.3:+81749188 | MS.gene06213:CDS |
| ATTATAAGCCACCTATAGGA+TGG | 0.608178 | 3.3:-81747519 | None:intergenic |
| CCCCTCCCACAGATGACGAA+AGG | 0.610507 | 3.3:+81749760 | MS.gene06213:CDS |
| TTGCACTAAATGCCGGCAAG+TGG | 0.611811 | 3.3:+81749697 | MS.gene06213:CDS |
| GTGCATGTTAATGAAGAAGA+TGG | 0.611852 | 3.3:+81748824 | MS.gene06213:CDS |
| AGCTCCACTCAAAATTGTAG+TGG | 0.612842 | 3.3:-81749481 | None:intergenic |
| GGAAGCCTTTCGTCATCTGT+GGG | 0.613871 | 3.3:-81749765 | None:intergenic |
| CAGAAGAGACAGACTATCGT+GGG | 0.616345 | 3.3:+81751407 | MS.gene06213:intron |
| TGTTTAGAAAGAGAAATAAG+TGG | 0.619138 | 3.3:+81749374 | MS.gene06213:CDS |
| TTGCTCTTCAAAATGACACT+GGG | 0.620536 | 3.3:-81751088 | None:intergenic |
| GAATACAGAAGATGCTGCCG+AGG | 0.621862 | 3.3:+81752311 | MS.gene06213:CDS |
| TACAGAAGATGCTGCCGAGG+GGG | 0.626315 | 3.3:+81752314 | MS.gene06213:CDS |
| TTGTCTTCGTCAGCAAGAAG+AGG | 0.627512 | 3.3:-81749035 | None:intergenic |
| AGGAATATGTTTCCTGAGAG+GGG | 0.628568 | 3.3:-81750990 | None:intergenic |
| GTGGATGTGGTAAAAGATGA+AGG | 0.628693 | 3.3:-81751476 | None:intergenic |
| CGATTTGCTCTACCTCCAGT+GGG | 0.629855 | 3.3:+81752289 | MS.gene06213:CDS |
| CATACTTGGCCTCCTTCCTG+GGG | 0.630626 | 3.3:+81751439 | MS.gene06213:CDS |
| ATACAGTGCCACCATCCACT+CGG | 0.631096 | 3.3:-81749101 | None:intergenic |
| TCAAACAATGCAGCAGAATG+GGG | 0.631106 | 3.3:+81751585 | MS.gene06213:CDS |
| GACGTTCGAGAATTGAGCAG+AGG | 0.634922 | 3.3:-81745280 | None:intergenic |
| GATGACGAAAGGCTTCCTGT+TGG | 0.636057 | 3.3:+81749771 | MS.gene06213:CDS |
| TTTATGTTCCGAGTGGATGG+TGG | 0.637501 | 3.3:+81749093 | MS.gene06213:CDS |
| TTCAAGATAAACAACCCCAC+TGG | 0.638268 | 3.3:-81751023 | None:intergenic |
| ATTGAATGTACACAACTACC+TGG | 0.639305 | 3.3:+81749062 | MS.gene06213:CDS |
| GCAGAAGAGACAGACTATCG+TGG | 0.640708 | 3.3:+81751406 | MS.gene06213:intron |
| CTAGGAATATGTTTCCTGAG+AGG | 0.644586 | 3.3:-81750992 | None:intergenic |
| ACTCCTTTATGACGATAACC+AGG | 0.653563 | 3.3:-81749206 | None:intergenic |
| CAAGAGCAAGCAAACCCACA+CGG | 0.656542 | 3.3:-81749232 | None:intergenic |
| GAGACAATTTATGTTCCGAG+TGG | 0.659270 | 3.3:+81749086 | MS.gene06213:CDS |
| ATACTTGGCCTCCTTCCTGG+GGG | 0.660706 | 3.3:+81751440 | MS.gene06213:CDS |
| TCAGTGTGTATCCAAGAGCA+GGG | 0.663517 | 3.3:-81752231 | None:intergenic |
| AAGGAGGTAACTAGGACACC+AGG | 0.663763 | 3.3:-81752373 | None:intergenic |
| AAAAGTGCCTTTAGGTGTGA+CGG | 0.668167 | 3.3:+81748802 | MS.gene06213:CDS |
| GGTTTATTGAGTGACCACGT+TGG | 0.675486 | 3.3:+81752342 | MS.gene06213:CDS |
| AGCTGGATCAACATGCCAAG+AGG | 0.677057 | 3.3:-81747562 | None:intergenic |
| TGTATAAAATGTATCCAGTG+TGG | 0.684015 | 3.3:-81746373 | None:intergenic |
| TATCCAGTGTGGTATGACAC+CGG | 0.684470 | 3.3:-81746362 | None:intergenic |
| ATAAACGACCATCCTATAGG+TGG | 0.685021 | 3.3:+81747511 | MS.gene06213:CDS |
| TGATAATTAAGCGATGTGAG+GGG | 0.689937 | 3.3:+81751248 | MS.gene06213:CDS |
| ATGACTCTATGCCTAAAAGG+AGG | 0.692833 | 3.3:+81745974 | MS.gene06213:CDS |
| TTATACAGAGGGTGGCAATG+TGG | 0.697663 | 3.3:+81746389 | MS.gene06213:CDS |
| TCATAAAGGAGTCTGCCGTG+TGG | 0.699636 | 3.3:+81749217 | MS.gene06213:CDS |
| ATACCGGTGTCATACCACAC+TGG | 0.707579 | 3.3:+81746359 | MS.gene06213:CDS |
| CTGTATCTAAGATATCGAAG+AGG | 0.711016 | 3.3:-81747488 | None:intergenic |
| TAGGAATACTGGGATTCCGG+CGG | 0.711408 | 3.3:+81751180 | MS.gene06213:CDS |
| ACGTGAATTAAACTGGTCTG+AGG | 0.711510 | 3.3:+81751530 | MS.gene06213:CDS |
| GCTTTATGGTTTAGGCACAG+AGG | 0.719101 | 3.3:+81750863 | MS.gene06213:CDS |
| GTAATCCTTCAATAAGCTAG+GGG | 0.720242 | 3.3:-81747439 | None:intergenic |
| ATACAGAAGATGCTGCCGAG+GGG | 0.739771 | 3.3:+81752313 | MS.gene06213:CDS |
| CAAGAGGCACCAGATCTCTG+TGG | 0.740954 | 3.3:-81747546 | None:intergenic |
| CATCACAGAGAAATGCAACG+TGG | 0.742244 | 3.3:+81751114 | MS.gene06213:CDS |
| AAAGATCACTGAAATCAAGG+AGG | 0.742693 | 3.3:-81752389 | None:intergenic |
| ACCAGGATTTCACTCCAACG+TGG | 0.759662 | 3.3:-81752356 | None:intergenic |
| GATGTGGTAAAAGATGAAGG+TGG | 0.808325 | 3.3:-81751473 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 81745194 | 81752509 | 81745194 | ID=MS.gene06213 |
| chr3.3 | mRNA | 81745194 | 81752509 | 81745194 | ID=MS.gene06213.t1;Parent=MS.gene06213 |
| chr3.3 | exon | 81745194 | 81745342 | 81745194 | ID=MS.gene06213.t1.exon1;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81745194 | 81745342 | 81745194 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81745937 | 81746050 | 81745937 | ID=MS.gene06213.t1.exon2;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81745937 | 81746050 | 81745937 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81746147 | 81746205 | 81746147 | ID=MS.gene06213.t1.exon3;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81746147 | 81746205 | 81746147 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81746328 | 81746470 | 81746328 | ID=MS.gene06213.t1.exon4;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81746328 | 81746470 | 81746328 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81747100 | 81747297 | 81747100 | ID=MS.gene06213.t1.exon5;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81747100 | 81747297 | 81747100 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81747426 | 81747625 | 81747426 | ID=MS.gene06213.t1.exon6;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81747426 | 81747625 | 81747426 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81748781 | 81748880 | 81748781 | ID=MS.gene06213.t1.exon7;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81748781 | 81748880 | 81748781 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81749017 | 81749592 | 81749017 | ID=MS.gene06213.t1.exon8;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81749017 | 81749592 | 81749017 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81749687 | 81749813 | 81749687 | ID=MS.gene06213.t1.exon9;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81749687 | 81749813 | 81749687 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81750835 | 81750884 | 81750835 | ID=MS.gene06213.t1.exon10;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81750835 | 81750884 | 81750835 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81750956 | 81751287 | 81750956 | ID=MS.gene06213.t1.exon11;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81750956 | 81751287 | 81750956 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81751410 | 81751667 | 81751410 | ID=MS.gene06213.t1.exon12;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81751410 | 81751667 | 81751410 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81752022 | 81752106 | 81752022 | ID=MS.gene06213.t1.exon13;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81752022 | 81752106 | 81752022 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81752207 | 81752417 | 81752207 | ID=MS.gene06213.t1.exon14;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81752207 | 81752417 | 81752207 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| chr3.3 | exon | 81752469 | 81752509 | 81752469 | ID=MS.gene06213.t1.exon15;Parent=MS.gene06213.t1 |
| chr3.3 | CDS | 81752469 | 81752509 | 81752469 | ID=cds.MS.gene06213.t1;Parent=MS.gene06213.t1 |
| Gene Sequence |
| Protein sequence |
