Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06231.t1 | XP_003602795.1 | 95 | 377 | 17 | 2 | 1 | 376 | 1 | 376 | 2.40E-200 | 708 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06231.t1 | B9DI20 | 41.2 | 400 | 170 | 18 | 1 | 376 | 1 | 359 | 2.0e-59 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06231.t1 | G7J3V1 | 95.0 | 377 | 17 | 2 | 1 | 376 | 1 | 376 | 1.7e-200 | 708.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene06231.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06231.t1 | MTR_3g099080 | 94.960 | 377 | 17 | 2 | 1 | 376 | 1 | 376 | 0.0 | 729 |
| MS.gene06231.t1 | MTR_8g096780 | 59.314 | 408 | 116 | 20 | 1 | 376 | 1 | 390 | 6.98e-136 | 393 |
| MS.gene06231.t1 | MTR_7g028740 | 33.415 | 407 | 200 | 11 | 1 | 376 | 1 | 367 | 1.42e-55 | 186 |
| MS.gene06231.t1 | MTR_4g109770 | 55.474 | 137 | 41 | 4 | 43 | 172 | 75 | 198 | 7.53e-39 | 144 |
| MS.gene06231.t1 | MTR_2g461920 | 50.323 | 155 | 67 | 3 | 43 | 192 | 122 | 271 | 4.41e-38 | 144 |
| MS.gene06231.t1 | MTR_5g046670 | 45.752 | 153 | 79 | 1 | 43 | 195 | 194 | 342 | 4.87e-37 | 140 |
| MS.gene06231.t1 | MTR_3g085180 | 50.000 | 126 | 61 | 2 | 83 | 206 | 151 | 276 | 1.82e-36 | 137 |
| MS.gene06231.t1 | MTR_7g444860 | 58.696 | 92 | 38 | 0 | 87 | 178 | 139 | 230 | 1.55e-33 | 127 |
| MS.gene06231.t1 | MTR_7g092930 | 36.820 | 239 | 118 | 5 | 97 | 330 | 68 | 278 | 5.10e-33 | 126 |
| MS.gene06231.t1 | MTR_4g088555 | 57.000 | 100 | 40 | 1 | 71 | 170 | 40 | 136 | 1.50e-31 | 117 |
| MS.gene06231.t1 | MTR_8g080690 | 52.252 | 111 | 52 | 1 | 97 | 206 | 151 | 261 | 4.52e-31 | 122 |
| MS.gene06231.t1 | MTR_1g053715 | 66.234 | 77 | 26 | 0 | 97 | 173 | 74 | 150 | 5.97e-31 | 120 |
| MS.gene06231.t1 | MTR_8g463140 | 64.103 | 78 | 28 | 0 | 97 | 174 | 65 | 142 | 7.25e-31 | 116 |
| MS.gene06231.t1 | MTR_1g035010 | 46.715 | 137 | 67 | 2 | 97 | 233 | 104 | 234 | 5.00e-30 | 122 |
| MS.gene06231.t1 | MTR_8g005960 | 68.421 | 76 | 24 | 0 | 97 | 172 | 187 | 262 | 6.06e-30 | 117 |
| MS.gene06231.t1 | MTR_2g014200 | 61.905 | 84 | 32 | 0 | 91 | 174 | 58 | 141 | 9.18e-30 | 112 |
| MS.gene06231.t1 | MTR_2g046550 | 59.302 | 86 | 35 | 0 | 97 | 182 | 139 | 224 | 2.09e-29 | 120 |
| MS.gene06231.t1 | MTR_1g086250 | 55.000 | 100 | 43 | 1 | 83 | 182 | 133 | 230 | 2.17e-29 | 120 |
| MS.gene06231.t1 | MTR_7g110320 | 50.450 | 111 | 52 | 2 | 72 | 182 | 121 | 228 | 1.19e-28 | 118 |
| MS.gene06231.t1 | MTR_7g110320 | 50.450 | 111 | 52 | 2 | 72 | 182 | 121 | 228 | 1.90e-28 | 117 |
| MS.gene06231.t1 | MTR_2g078770 | 53.763 | 93 | 43 | 0 | 97 | 189 | 58 | 150 | 5.19e-28 | 108 |
| MS.gene06231.t1 | MTR_8g080680 | 32.231 | 242 | 133 | 6 | 97 | 330 | 132 | 350 | 1.75e-27 | 112 |
| MS.gene06231.t1 | MTR_8g066240 | 55.102 | 98 | 44 | 0 | 40 | 137 | 5 | 102 | 2.46e-23 | 93.6 |
| MS.gene06231.t1 | MTR_8g080670 | 58.904 | 73 | 30 | 0 | 97 | 169 | 162 | 234 | 5.11e-23 | 99.8 |
| MS.gene06231.t1 | MTR_2g020620 | 49.231 | 65 | 33 | 0 | 106 | 170 | 99 | 163 | 1.74e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06231.t1 | AT5G50670 | 38.806 | 402 | 177 | 17 | 1 | 376 | 1 | 359 | 1.25e-68 | 220 |
| MS.gene06231.t1 | AT5G50670 | 38.806 | 402 | 177 | 17 | 1 | 376 | 1 | 359 | 1.25e-68 | 220 |
| MS.gene06231.t1 | AT5G50570 | 38.806 | 402 | 177 | 17 | 1 | 376 | 1 | 359 | 1.25e-68 | 220 |
| MS.gene06231.t1 | AT5G50570 | 38.806 | 402 | 177 | 17 | 1 | 376 | 1 | 359 | 1.25e-68 | 220 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 6.55e-33 | 126 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27370 | 53.636 | 110 | 48 | 2 | 64 | 172 | 144 | 251 | 9.22e-33 | 127 |
| MS.gene06231.t1 | AT1G27360 | 54.630 | 108 | 44 | 2 | 66 | 172 | 147 | 250 | 1.28e-32 | 126 |
| MS.gene06231.t1 | AT1G27360 | 54.630 | 108 | 44 | 2 | 66 | 172 | 147 | 250 | 1.28e-32 | 126 |
| MS.gene06231.t1 | AT1G27360 | 54.630 | 108 | 44 | 2 | 66 | 172 | 147 | 250 | 1.28e-32 | 126 |
| MS.gene06231.t1 | AT1G27360 | 54.630 | 108 | 44 | 2 | 66 | 172 | 147 | 250 | 1.28e-32 | 126 |
| MS.gene06231.t1 | AT2G47070 | 58.252 | 103 | 41 | 1 | 97 | 197 | 106 | 208 | 3.83e-32 | 128 |
| MS.gene06231.t1 | AT2G42200 | 62.963 | 81 | 30 | 0 | 97 | 177 | 74 | 154 | 7.38e-32 | 124 |
| MS.gene06231.t1 | AT3G60030 | 55.046 | 109 | 46 | 1 | 94 | 199 | 124 | 232 | 8.33e-32 | 127 |
| MS.gene06231.t1 | AT1G76580 | 67.901 | 81 | 26 | 0 | 97 | 177 | 114 | 194 | 9.96e-32 | 127 |
| MS.gene06231.t1 | AT1G76580 | 67.901 | 81 | 26 | 0 | 97 | 177 | 114 | 194 | 1.08e-31 | 127 |
| MS.gene06231.t1 | AT5G43270 | 63.750 | 80 | 29 | 0 | 94 | 173 | 166 | 245 | 1.35e-31 | 124 |
| MS.gene06231.t1 | AT5G43270 | 63.750 | 80 | 29 | 0 | 94 | 173 | 166 | 245 | 1.35e-31 | 124 |
| MS.gene06231.t1 | AT5G43270 | 63.750 | 80 | 29 | 0 | 94 | 173 | 166 | 245 | 1.35e-31 | 124 |
| MS.gene06231.t1 | AT1G76580 | 67.901 | 81 | 26 | 0 | 97 | 177 | 114 | 194 | 1.55e-31 | 127 |
| MS.gene06231.t1 | AT1G69170 | 60.606 | 99 | 36 | 1 | 76 | 171 | 100 | 198 | 1.81e-31 | 123 |
| MS.gene06231.t1 | AT3G57920 | 56.701 | 97 | 42 | 0 | 77 | 173 | 39 | 135 | 4.25e-31 | 121 |
| MS.gene06231.t1 | AT2G33810 | 64.865 | 74 | 26 | 0 | 97 | 170 | 54 | 127 | 1.58e-30 | 114 |
| MS.gene06231.t1 | AT1G02065 | 64.286 | 84 | 30 | 0 | 87 | 170 | 178 | 261 | 2.14e-30 | 119 |
| MS.gene06231.t1 | AT1G53160 | 62.821 | 78 | 29 | 0 | 97 | 174 | 54 | 131 | 2.78e-29 | 112 |
| MS.gene06231.t1 | AT1G53160 | 62.821 | 78 | 29 | 0 | 97 | 174 | 54 | 131 | 5.07e-29 | 111 |
| MS.gene06231.t1 | AT1G53160 | 62.821 | 78 | 29 | 0 | 97 | 174 | 54 | 131 | 5.07e-29 | 111 |
| MS.gene06231.t1 | AT1G20980 | 64.634 | 82 | 28 | 1 | 97 | 177 | 120 | 201 | 6.04e-29 | 119 |
| MS.gene06231.t1 | AT3G15270 | 60.811 | 74 | 29 | 0 | 97 | 170 | 63 | 136 | 1.99e-27 | 107 |
| MS.gene06231.t1 | AT2G47070 | 55.696 | 79 | 33 | 1 | 121 | 197 | 1 | 79 | 4.13e-19 | 89.7 |
| MS.gene06231.t1 | AT1G02065 | 60.345 | 58 | 23 | 0 | 87 | 144 | 178 | 235 | 1.27e-17 | 82.0 |
| MS.gene06231.t1 | AT5G18830 | 48.684 | 76 | 38 | 1 | 97 | 171 | 138 | 213 | 8.00e-17 | 82.8 |
| MS.gene06231.t1 | AT5G18830 | 48.684 | 76 | 38 | 1 | 97 | 171 | 138 | 213 | 9.57e-17 | 82.4 |
| MS.gene06231.t1 | AT5G18830 | 48.684 | 76 | 38 | 1 | 97 | 171 | 138 | 213 | 1.01e-16 | 82.4 |
Find 92 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGTAGGTGTTGCAATTT+TGG | 0.158488 | 3.1:-78961850 | None:intergenic |
| ACCAACCTTACCTTGGTAAT+TGG | 0.175692 | 3.1:-78963243 | None:intergenic |
| AAAGCACCTTCTTGGGATTT+GGG | 0.187536 | 3.1:+78961657 | MS.gene06231:CDS |
| GTTGGCAGAACCTTTGTTTA+AGG | 0.193299 | 3.1:-78962037 | None:intergenic |
| GAAAGCACCTTCTTGGGATT+TGG | 0.238938 | 3.1:+78961656 | MS.gene06231:CDS |
| ACGAAACCACACCTCTTCTT+AGG | 0.280555 | 3.1:+78964828 | MS.gene06231:CDS |
| AAATTTCTATTCCCATTGAT+AGG | 0.308664 | 3.1:-78965149 | None:intergenic |
| CCACATGTACTTGTTGGTTT+TGG | 0.311200 | 3.1:-78964703 | None:intergenic |
| GGAATTTGAAAGCACCTTCT+TGG | 0.318651 | 3.1:+78961649 | MS.gene06231:CDS |
| TCTTCCATTGTTTCTATGTT+GGG | 0.318840 | 3.1:-78961702 | None:intergenic |
| GCAACACCTACTTCTTCTTC+AGG | 0.325475 | 3.1:+78961858 | MS.gene06231:CDS |
| ATGGAAGAATCAAACAGATT+TGG | 0.341310 | 3.1:+78961717 | MS.gene06231:CDS |
| TGATCACTCTCACTCCCATT+TGG | 0.346060 | 3.1:-78965061 | None:intergenic |
| CATGTATAGGTTTCATTCGC+TGG | 0.346570 | 3.1:+78963109 | MS.gene06231:intron |
| AATGTCCCGTATGCAGCCTT+TGG | 0.355884 | 3.1:+78964985 | MS.gene06231:CDS |
| TTCTTCCATTGTTTCTATGT+TGG | 0.356796 | 3.1:-78961703 | None:intergenic |
| GATCACTCTCACTCCCATTT+GGG | 0.397635 | 3.1:-78965060 | None:intergenic |
| CTCAACTATTTCCCTATCAA+TGG | 0.401247 | 3.1:+78965137 | MS.gene06231:CDS |
| GAATTTGAAAGCACCTTCTT+GGG | 0.406706 | 3.1:+78961650 | MS.gene06231:CDS |
| ATTTGAAGCTTGGTCAGGTT+GGG | 0.406990 | 3.1:+78961772 | MS.gene06231:CDS |
| AAGTTGCTTCCCTTCTCCAT+AGG | 0.412844 | 3.1:-78964765 | None:intergenic |
| ATGTCCCGTATGCAGCCTTT+GGG | 0.413710 | 3.1:+78964986 | MS.gene06231:CDS |
| ACTCCAGAGGTTACAATTTG+TGG | 0.417163 | 3.1:+78962014 | MS.gene06231:CDS |
| GTAATTGTAGAGATTATCAT+AGG | 0.418535 | 3.1:+78961961 | MS.gene06231:CDS |
| CTACCAGCAGGTCGCGTGAT+AGG | 0.419897 | 3.1:-78963212 | None:intergenic |
| CAGACGCACACATCTGATAA+TGG | 0.424137 | 3.1:+78964932 | MS.gene06231:CDS |
| CAATTTGTGGCCTTAAACAA+AGG | 0.433957 | 3.1:+78962027 | MS.gene06231:CDS |
| CAGTTTCTTGTCTTGTGGAT+GGG | 0.435642 | 3.1:+78961922 | MS.gene06231:CDS |
| TTGGAGTTTATAAAATGAAA+GGG | 0.436768 | 3.1:+78961736 | MS.gene06231:CDS |
| TATCAACCACATGTACTTGT+TGG | 0.442335 | 3.1:-78964709 | None:intergenic |
| GAAGGAGTGTTGGTCCCAAA+TGG | 0.443655 | 3.1:+78965046 | MS.gene06231:CDS |
| AATTGTAACCTCTGGAGTCT+TGG | 0.443787 | 3.1:-78962009 | None:intergenic |
| AGTTGCTTCCCTTCTCCATA+GGG | 0.445636 | 3.1:-78964764 | None:intergenic |
| AACTTGAAAAGGGTAGCAAC+TGG | 0.449000 | 3.1:-78964604 | None:intergenic |
| AGATTATCATAGGCGTCATA+AGG | 0.456365 | 3.1:+78961971 | MS.gene06231:CDS |
| GCAGGTCGCGTGATAGGTTC+AGG | 0.457130 | 3.1:-78963206 | None:intergenic |
| ACAGTTTCTTGTCTTGTGGA+TGG | 0.459317 | 3.1:+78961921 | MS.gene06231:CDS |
| AATTTCTATTCCCATTGATA+GGG | 0.460765 | 3.1:-78965148 | None:intergenic |
| TGTTGATTTGAAGCTTGGTC+AGG | 0.463472 | 3.1:+78961767 | MS.gene06231:CDS |
| AAGCACCTTCTTGGGATTTG+GGG | 0.465651 | 3.1:+78961658 | MS.gene06231:CDS |
| CATGGCAGTAGAACTTGAAA+AGG | 0.466360 | 3.1:-78964615 | None:intergenic |
| AGCTGTAGGAAACGTTTAGA+TGG | 0.466807 | 3.1:+78963155 | MS.gene06231:CDS |
| TTTCTTCCTGTGAAAGTGGT+AGG | 0.467735 | 3.1:+78964666 | MS.gene06231:CDS |
| AGGCCACAAATTGTAACCTC+TGG | 0.469390 | 3.1:-78962017 | None:intergenic |
| TTTGGAGTTTATAAAATGAA+AGG | 0.469867 | 3.1:+78961735 | MS.gene06231:CDS |
| TGGGACCAACACTCCTTCCA+TGG | 0.470666 | 3.1:-78965041 | None:intergenic |
| GGTTCTGCCAACAGTGTAGC+AGG | 0.480510 | 3.1:+78962048 | MS.gene06231:CDS |
| TAACAATAGCTTTGAGTCCA+TGG | 0.485578 | 3.1:+78965024 | MS.gene06231:CDS |
| CTCATTTCTTCCTGTGAAAG+TGG | 0.486411 | 3.1:+78964662 | MS.gene06231:CDS |
| TTGTTCCTCGTTGTATAACA+TGG | 0.491290 | 3.1:+78965084 | MS.gene06231:CDS |
| CGCGTGATAGGTTCAGGCTG+TGG | 0.502946 | 3.1:-78963200 | None:intergenic |
| TGATAATGGTTTGAATCAAA+TGG | 0.506912 | 3.1:+78964946 | MS.gene06231:CDS |
| TTGTATAACATGGGTTCTGA+TGG | 0.507293 | 3.1:+78965094 | MS.gene06231:CDS |
| TCAACTATTTCCCTATCAAT+GGG | 0.507836 | 3.1:+78965138 | MS.gene06231:CDS |
| TGAGTCCATGGAAGGAGTGT+TGG | 0.509096 | 3.1:+78965036 | MS.gene06231:CDS |
| GAACCTATCACGCGACCTGC+TGG | 0.513292 | 3.1:+78963209 | MS.gene06231:CDS |
| TTGCTACTTGTCCTAAGAAG+AGG | 0.514720 | 3.1:-78964839 | None:intergenic |
| ATTGACAGTTTCTTGTCTTG+TGG | 0.515582 | 3.1:+78961917 | MS.gene06231:CDS |
| TCAGTCCCAAAGGCTGCATA+CGG | 0.523893 | 3.1:-78964991 | None:intergenic |
| GAAGATCCTGAAGAAGAAGT+AGG | 0.539972 | 3.1:-78961864 | None:intergenic |
| TTGCTTCCCTTCTCCATAGG+GGG | 0.540375 | 3.1:-78964762 | None:intergenic |
| AGCACCTTCTTGGGATTTGG+GGG | 0.546781 | 3.1:+78961659 | MS.gene06231:CDS |
| TGTTCCTCGTTGTATAACAT+GGG | 0.547164 | 3.1:+78965085 | MS.gene06231:CDS |
| GTGAAGCCTACCACTTTCAC+AGG | 0.547444 | 3.1:-78964672 | None:intergenic |
| TGGAGTTTATAAAATGAAAG+GGG | 0.553424 | 3.1:+78961737 | MS.gene06231:CDS |
| AAGGAGTGTTGGTCCCAAAT+GGG | 0.554973 | 3.1:+78965047 | MS.gene06231:CDS |
| CTGCCATGGTGAATTCAGCT+TGG | 0.557661 | 3.1:+78964630 | MS.gene06231:CDS |
| ATTACCCAACATAGAAACAA+TGG | 0.578453 | 3.1:+78961698 | MS.gene06231:CDS |
| GTTGTTATTATATTATGGAG+TGG | 0.582799 | 3.1:+78961628 | None:intergenic |
| GTGAATTCAGCTTGGAGTAG+CGG | 0.589283 | 3.1:+78964638 | MS.gene06231:CDS |
| GCATCATTAGACAAAGGAAG+TGG | 0.590112 | 3.1:-78961816 | None:intergenic |
| GATTTGAAGCTTGGTCAGGT+TGG | 0.592453 | 3.1:+78961771 | MS.gene06231:CDS |
| ACTTGAAAAGGGTAGCAACT+GGG | 0.597817 | 3.1:-78964603 | None:intergenic |
| CATTGATAGGGAAATAGTTG+AGG | 0.598793 | 3.1:-78965136 | None:intergenic |
| ATATATACCTGCTACACTGT+TGG | 0.601239 | 3.1:-78962055 | None:intergenic |
| GACAGAAGAGAGAGAGCACA+AGG | 0.601971 | 3.1:-78964902 | None:intergenic |
| AATAGCTTTGAGTCCATGGA+AGG | 0.603284 | 3.1:+78965028 | MS.gene06231:CDS |
| ATGGCAGTAGAACTTGAAAA+GGG | 0.604257 | 3.1:-78964614 | None:intergenic |
| TGCATACGGGACATTGAATG+AGG | 0.606553 | 3.1:-78964977 | None:intergenic |
| CCATGCAGACTCAGTCCCAA+AGG | 0.608403 | 3.1:-78965001 | None:intergenic |
| CCTTTGGGACTGAGTCTGCA+TGG | 0.612958 | 3.1:+78965001 | MS.gene06231:CDS |
| CAGTCCCAAAGGCTGCATAC+GGG | 0.620364 | 3.1:-78964990 | None:intergenic |
| GTTGCTTCCCTTCTCCATAG+GGG | 0.627059 | 3.1:-78964763 | None:intergenic |
| ATGGGTTCTGATGGATCACA+AGG | 0.638864 | 3.1:+78965103 | MS.gene06231:CDS |
| CCAAAACCAACAAGTACATG+TGG | 0.642955 | 3.1:+78964703 | MS.gene06231:CDS |
| GCACCTTCTTGGGATTTGGG+GGG | 0.648392 | 3.1:+78961660 | MS.gene06231:CDS |
| ACTTGTCCTAAGAAGAGGTG+TGG | 0.652942 | 3.1:-78964834 | None:intergenic |
| ACAACAGCATCATTAGACAA+AGG | 0.660295 | 3.1:-78961822 | None:intergenic |
| AGGAAGTGGTGATTGATCAG+TGG | 0.671389 | 3.1:-78961802 | None:intergenic |
| ACTTCATTCCAAGACTCCAG+AGG | 0.684162 | 3.1:+78962001 | MS.gene06231:CDS |
| ACTCCAAGCTGAATTCACCA+TGG | 0.715980 | 3.1:-78964633 | None:intergenic |
| AGAACCCATGTTATACAACG+AGG | 0.772576 | 3.1:-78965089 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTTCAAATTTAAACAT+AGG | - | chr3.1:78962101-78962120 | None:intergenic | 10.0% |
| !!! | ATATATCATTATTTTGTTAA+TGG | - | chr3.1:78964505-78964524 | None:intergenic | 10.0% |
| !! | ATATTTACTTATAAATGTGA+CGG | - | chr3.1:78962294-78962313 | None:intergenic | 15.0% |
| !! | GAAAACATAGTTTAATTATA+TGG | + | chr3.1:78962940-78962959 | MS.gene06231:intron | 15.0% |
| !! | GATAGAATAAAATTATAAAG+CGG | - | chr3.1:78962714-78962733 | None:intergenic | 15.0% |
| !! | TTGTACTTTAAATAAACTAA+TGG | - | chr3.1:78964540-78964559 | None:intergenic | 15.0% |
| !!! | AATTTTCTCTTAAAAAACAA+TGG | - | chr3.1:78963654-78963673 | None:intergenic | 15.0% |
| !!! | AGTTTTTCTCAAATTAATAT+CGG | + | chr3.1:78962854-78962873 | MS.gene06231:intron | 15.0% |
| !!! | CTGTCATAATTTTAAAATTT+GGG | - | chr3.1:78964371-78964390 | None:intergenic | 15.0% |
| !!! | TCTGTCATAATTTTAAAATT+TGG | - | chr3.1:78964372-78964391 | None:intergenic | 15.0% |
| !! | ACATTTAATGAATCTAAAAG+AGG | + | chr3.1:78962369-78962388 | MS.gene06231:intron | 20.0% |
| !! | ATTAGTATAATATTGTTGGT+AGG | + | chr3.1:78963589-78963608 | MS.gene06231:intron | 20.0% |
| !! | CGTGAAAAAATATGTTAATA+TGG | + | chr3.1:78964431-78964450 | MS.gene06231:intron | 20.0% |
| !! | CTATTATATTCTATAGCTTA+GGG | - | chr3.1:78962139-78962158 | None:intergenic | 20.0% |
| !! | TACCAACAATATTATACTAA+TGG | - | chr3.1:78963590-78963609 | None:intergenic | 20.0% |
| !! | TATTATATTCTATAGCTTAG+GGG | - | chr3.1:78962138-78962157 | None:intergenic | 20.0% |
| !! | TCTATTATATTCTATAGCTT+AGG | - | chr3.1:78962140-78962159 | None:intergenic | 20.0% |
| !! | TGTTTATAAATATGACTAGA+GGG | + | chr3.1:78962398-78962417 | MS.gene06231:intron | 20.0% |
| !! | TTAGTATAATATTGTTGGTA+GGG | + | chr3.1:78963590-78963609 | MS.gene06231:intron | 20.0% |
| !! | TTGGAGTTTATAAAATGAAA+GGG | + | chr3.1:78961736-78961755 | MS.gene06231:CDS | 20.0% |
| !! | TTGTTTATAAATATGACTAG+AGG | + | chr3.1:78962397-78962416 | MS.gene06231:intron | 20.0% |
| !! | TTTGGTTAAAGAATAAAGAA+AGG | - | chr3.1:78962657-78962676 | None:intergenic | 20.0% |
| !!! | AATGTTAGAGATTAATTTGA+CGG | - | chr3.1:78962217-78962236 | None:intergenic | 20.0% |
| !!! | TATTTTGTTAATGGCTAATA+AGG | - | chr3.1:78964496-78964515 | None:intergenic | 20.0% |
| !!! | TTTGGAGTTTATAAAATGAA+AGG | + | chr3.1:78961735-78961754 | MS.gene06231:CDS | 20.0% |
| ! | AAATTAAGATTCAGGACTTA+AGG | - | chr3.1:78963085-78963104 | None:intergenic | 25.0% |
| ! | ACATAAGTTATGAACTAACT+TGG | + | chr3.1:78962438-78962457 | MS.gene06231:intron | 25.0% |
| ! | ATACTACATTTATTCTACGT+GGG | - | chr3.1:78964124-78964143 | None:intergenic | 25.0% |
| ! | ATAGGGAGTAATTAACTAAT+CGG | + | chr3.1:78963884-78963903 | MS.gene06231:intron | 25.0% |
| ! | ATATATTTCCGTATCTTTGT+GGG | - | chr3.1:78963447-78963466 | None:intergenic | 25.0% |
| ! | CAACATTTAATGCTTTCATT+GGG | + | chr3.1:78963934-78963953 | MS.gene06231:intron | 25.0% |
| ! | CCTAATAATTTCAGCATTAT+CGG | + | chr3.1:78963356-78963375 | MS.gene06231:intron | 25.0% |
| ! | GTAATTGTAGAGATTATCAT+AGG | + | chr3.1:78961961-78961980 | MS.gene06231:CDS | 25.0% |
| ! | TATACTTATATCAGATGAGT+AGG | + | chr3.1:78963472-78963491 | MS.gene06231:intron | 25.0% |
| ! | TATATATTTCCGTATCTTTG+TGG | - | chr3.1:78963448-78963467 | None:intergenic | 25.0% |
| ! | TCTTAATTTCCTTCATGTAT+AGG | + | chr3.1:78963096-78963115 | MS.gene06231:intron | 25.0% |
| ! | TGATTAATTAATCGCATGAA+AGG | - | chr3.1:78963679-78963698 | None:intergenic | 25.0% |
| ! | TGGAGTTTATAAAATGAAAG+GGG | + | chr3.1:78961737-78961756 | MS.gene06231:CDS | 25.0% |
| ! | TTCACGAGTAATAAAATAGT+GGG | - | chr3.1:78964417-78964436 | None:intergenic | 25.0% |
| ! | TTGAAGCTTCTATAAAGTTA+CGG | - | chr3.1:78963730-78963749 | None:intergenic | 25.0% |
| ! | TTGATGTATGTGGTTAAATA+GGG | + | chr3.1:78963867-78963886 | MS.gene06231:intron | 25.0% |
| ! | TTTATAGAAGCTTCAAATTC+AGG | + | chr3.1:78963734-78963753 | MS.gene06231:intron | 25.0% |
| ! | TTTCACGAGTAATAAAATAG+TGG | - | chr3.1:78964418-78964437 | None:intergenic | 25.0% |
| !! | AAATAACTGATAGCGTAAAT+TGG | + | chr3.1:78964252-78964271 | MS.gene06231:intron | 25.0% |
| !! | GATAAACAAGATATTTTTCC+TGG | + | chr3.1:78964728-78964747 | MS.gene06231:CDS | 25.0% |
| !!! | ACGTTTTCAATCTAAAATGT+CGG | - | chr3.1:78962754-78962773 | None:intergenic | 25.0% |
| !!! | CAATGAAAGCATTAAATGTT+GGG | - | chr3.1:78963935-78963954 | None:intergenic | 25.0% |
| !!! | TGATAATGGTTTGAATCAAA+TGG | + | chr3.1:78964946-78964965 | MS.gene06231:CDS | 25.0% |
| !!! | TTAGTTTGTAGATGCATTTA+TGG | + | chr3.1:78962534-78962553 | MS.gene06231:intron | 25.0% |
| !!! | TTTTACTGCTATACTTTTTC+AGG | + | chr3.1:78964578-78964597 | MS.gene06231:intron | 25.0% |
| ACTCATCTTTAAGTAATCGA+TGG | - | chr3.1:78964004-78964023 | None:intergenic | 30.0% | |
| ATCTAGGCATATATGCAAAT+GGG | - | chr3.1:78963324-78963343 | None:intergenic | 30.0% | |
| ATGAAAGAAAAAGAAGCTGT+AGG | + | chr3.1:78963141-78963160 | MS.gene06231:CDS | 30.0% | |
| ATGGAAGAATCAAACAGATT+TGG | + | chr3.1:78961717-78961736 | MS.gene06231:CDS | 30.0% | |
| ATTACCCAACATAGAAACAA+TGG | + | chr3.1:78961698-78961717 | MS.gene06231:CDS | 30.0% | |
| CAAAATCTCGATGAAATATC+AGG | - | chr3.1:78963772-78963791 | None:intergenic | 30.0% | |
| CATACTACATTTATTCTACG+TGG | - | chr3.1:78964125-78964144 | None:intergenic | 30.0% | |
| CATGAAGGAAATTAAGATTC+AGG | - | chr3.1:78963093-78963112 | None:intergenic | 30.0% | |
| CCAACATTTAATGCTTTCAT+TGG | + | chr3.1:78963933-78963952 | MS.gene06231:intron | 30.0% | |
| CCGATAATGCTGAAATTATT+AGG | - | chr3.1:78963359-78963378 | None:intergenic | 30.0% | |
| CTTATAACTTACTGTCTGTT+TGG | - | chr3.1:78963812-78963831 | None:intergenic | 30.0% | |
| GAAAGGTAATTAAGATGCTA+AGG | - | chr3.1:78962640-78962659 | None:intergenic | 30.0% | |
| GATAACATGACCTAGAAATT+AGG | - | chr3.1:78964225-78964244 | None:intergenic | 30.0% | |
| GCATGCATATGAAAAACTTA+TGG | - | chr3.1:78962908-78962927 | None:intergenic | 30.0% | |
| GGCCATTAGTATAATATTGT+TGG | + | chr3.1:78963585-78963604 | MS.gene06231:intron | 30.0% | |
| GTTGATGTATGTGGTTAAAT+AGG | + | chr3.1:78963866-78963885 | MS.gene06231:intron | 30.0% | |
| TAGGGAGTAATTAACTAATC+GGG | + | chr3.1:78963885-78963904 | MS.gene06231:intron | 30.0% | |
| TATATTTCCGTATCTTTGTG+GGG | - | chr3.1:78963446-78963465 | None:intergenic | 30.0% | |
| TCAACTATTTCCCTATCAAT+GGG | + | chr3.1:78965138-78965157 | MS.gene06231:CDS | 30.0% | |
| TTGTGTCTAACCTAATTTCT+AGG | + | chr3.1:78964212-78964231 | MS.gene06231:intron | 30.0% | |
| TTTACTTATAAATGTGACGG+AGG | - | chr3.1:78962291-78962310 | None:intergenic | 30.0% | |
| ! | ATGTGTTGAGAGATTCTTTT+TGG | - | chr3.1:78962675-78962694 | None:intergenic | 30.0% |
| ! | CTGATATTTCATCGAGATTT+TGG | + | chr3.1:78963770-78963789 | MS.gene06231:intron | 30.0% |
| ! | TGAAGCAAACTCTTTTTGTT+TGG | - | chr3.1:78963628-78963647 | None:intergenic | 30.0% |
| ! | TTTTAGATTGAAAACGTGTC+TGG | + | chr3.1:78962757-78962776 | MS.gene06231:intron | 30.0% |
| !! | ACCAAAAAAGTTGATGTATG+TGG | + | chr3.1:78963857-78963876 | MS.gene06231:intron | 30.0% |
| !! | CCAATGAAAGCATTAAATGT+TGG | - | chr3.1:78963936-78963955 | None:intergenic | 30.0% |
| !! | TCTTCCATTGTTTCTATGTT+GGG | - | chr3.1:78961705-78961724 | None:intergenic | 30.0% |
| !! | TTCTTCCATTGTTTCTATGT+TGG | - | chr3.1:78961706-78961725 | None:intergenic | 30.0% |
| !!! | ACCACATACATCAACTTTTT+TGG | - | chr3.1:78963861-78963880 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGTCCAATTACCA+AGG | + | chr3.1:78963233-78963252 | MS.gene06231:CDS | 30.0% |
| !!! | TTTTCTGTTGATTTGAAGCT+TGG | + | chr3.1:78961762-78961781 | MS.gene06231:CDS | 30.0% |
| AAATGTCTCGACTATTAGGT+AGG | - | chr3.1:78964164-78964183 | None:intergenic | 35.0% | |
| AAGCTTCTATAAAGTTACGG+TGG | - | chr3.1:78963727-78963746 | None:intergenic | 35.0% | |
| ACAACAGCATCATTAGACAA+AGG | - | chr3.1:78961825-78961844 | None:intergenic | 35.0% | |
| ACTACTTATAGGCTGGATTA+AGG | + | chr3.1:78963974-78963993 | MS.gene06231:intron | 35.0% | |
| AGATTATCATAGGCGTCATA+AGG | + | chr3.1:78961971-78961990 | MS.gene06231:CDS | 35.0% | |
| ATAGATGAGTGCGTTTGATT+TGG | + | chr3.1:78963525-78963544 | MS.gene06231:intron | 35.0% | |
| ATATATACCTGCTACACTGT+TGG | - | chr3.1:78962058-78962077 | None:intergenic | 35.0% | |
| ATGGCAGTAGAACTTGAAAA+GGG | - | chr3.1:78964617-78964636 | None:intergenic | 35.0% | |
| ATTGACAGTTTCTTGTCTTG+TGG | + | chr3.1:78961917-78961936 | MS.gene06231:CDS | 35.0% | |
| CATCTAGGCATATATGCAAA+TGG | - | chr3.1:78963325-78963344 | None:intergenic | 35.0% | |
| CATTGATAGGGAAATAGTTG+AGG | - | chr3.1:78965139-78965158 | None:intergenic | 35.0% | |
| CCACGAAAATGACTACTTAT+AGG | + | chr3.1:78963963-78963982 | MS.gene06231:intron | 35.0% | |
| CGAATGAAACCTATACATGA+AGG | - | chr3.1:78963108-78963127 | None:intergenic | 35.0% | |
| CTCAACTATTTCCCTATCAA+TGG | + | chr3.1:78965137-78965156 | MS.gene06231:CDS | 35.0% | |
| GAAAATGACTACTTATAGGC+TGG | + | chr3.1:78963967-78963986 | MS.gene06231:intron | 35.0% | |
| GAGAAAATGTCTCGACTATT+AGG | - | chr3.1:78964168-78964187 | None:intergenic | 35.0% | |
| GAGTAATTAACTAATCGGGT+TGG | + | chr3.1:78963889-78963908 | MS.gene06231:intron | 35.0% | |
| GCATGCATCAATTCATATCT+AGG | - | chr3.1:78963410-78963429 | None:intergenic | 35.0% | |
| GGCTAATAAGGAACATGATT+AGG | - | chr3.1:78964484-78964503 | None:intergenic | 35.0% | |
| TAAAGATCCCCACAAAGATA+CGG | + | chr3.1:78963436-78963455 | MS.gene06231:intron | 35.0% | |
| TAAGAAGCCAACATGAACAA+TGG | - | chr3.1:78962598-78962617 | None:intergenic | 35.0% | |
| TATCAACCACATGTACTTGT+TGG | - | chr3.1:78964712-78964731 | None:intergenic | 35.0% | |
| TCTAGGTCATGTTATCCTTA+AGG | + | chr3.1:78964229-78964248 | MS.gene06231:intron | 35.0% | |
| TGTTCCTCGTTGTATAACAT+GGG | + | chr3.1:78965085-78965104 | MS.gene06231:CDS | 35.0% | |
| TTAATGCTTTCATTGGGAGT+TGG | + | chr3.1:78963940-78963959 | MS.gene06231:intron | 35.0% | |
| TTCACATGTTAATTCGTGAC+TGG | + | chr3.1:78962879-78962898 | MS.gene06231:intron | 35.0% | |
| TTCCATTCCATTGTTCATGT+TGG | + | chr3.1:78962588-78962607 | MS.gene06231:intron | 35.0% | |
| TTGCATATATGCCTAGATGA+AGG | + | chr3.1:78963326-78963345 | MS.gene06231:intron | 35.0% | |
| TTGTTCCTCGTTGTATAACA+TGG | + | chr3.1:78965084-78965103 | MS.gene06231:CDS | 35.0% | |
| TTTGTCCAATTACCAAGGTA+AGG | + | chr3.1:78963238-78963257 | MS.gene06231:intron | 35.0% | |
| ! | CAATTTGTGGCCTTAAACAA+AGG | + | chr3.1:78962027-78962046 | MS.gene06231:CDS | 35.0% |
| ! | CGCTATCAGTTATTTCCTTA+AGG | - | chr3.1:78964247-78964266 | None:intergenic | 35.0% |
| ! | GACTGATTTCATATAGCATG+TGG | - | chr3.1:78962166-78962185 | None:intergenic | 35.0% |
| ! | TCCTTACGAGTCAATTTTGT+AGG | + | chr3.1:78964322-78964341 | MS.gene06231:intron | 35.0% |
| ! | TTGTATAACATGGGTTCTGA+TGG | + | chr3.1:78965094-78965113 | MS.gene06231:CDS | 35.0% |
| !! | AGAAGTAGGTGTTGCAATTT+TGG | - | chr3.1:78961853-78961872 | None:intergenic | 35.0% |
| !! | CCTATAAGTAGTCATTTTCG+TGG | - | chr3.1:78963966-78963985 | None:intergenic | 35.0% |
| !! | GAATTTGAAAGCACCTTCTT+GGG | + | chr3.1:78961650-78961669 | MS.gene06231:CDS | 35.0% |
| !! | TAACAATAGCTTTGAGTCCA+TGG | + | chr3.1:78965024-78965043 | MS.gene06231:CDS | 35.0% |
| !! | TCCTACAAAATTGACTCGTA+AGG | - | chr3.1:78964326-78964345 | None:intergenic | 35.0% |
| !! | TCTAAAATGTCGGTGTTGTA+TGG | - | chr3.1:78962744-78962763 | None:intergenic | 35.0% |
| AAACGCACTCATCTATCCAA+GGG | - | chr3.1:78963521-78963540 | None:intergenic | 40.0% | |
| AACCACATTGTTATCCTCAG+TGG | + | chr3.1:78963292-78963311 | MS.gene06231:intron | 40.0% | |
| AACTTGAAAAGGGTAGCAAC+TGG | - | chr3.1:78964607-78964626 | None:intergenic | 40.0% | |
| AATTATAAAGCGGAACCTCC+AGG | - | chr3.1:78962704-78962723 | None:intergenic | 40.0% | |
| ACAGTTTCTTGTCTTGTGGA+TGG | + | chr3.1:78961921-78961940 | MS.gene06231:CDS | 40.0% | |
| ACTCCAGAGGTTACAATTTG+TGG | + | chr3.1:78962014-78962033 | MS.gene06231:CDS | 40.0% | |
| ACTTGAAAAGGGTAGCAACT+GGG | - | chr3.1:78964606-78964625 | None:intergenic | 40.0% | |
| AGAACCCATGTTATACAACG+AGG | - | chr3.1:78965092-78965111 | None:intergenic | 40.0% | |
| AGCCAACATGAACAATGGAA+TGG | - | chr3.1:78962593-78962612 | None:intergenic | 40.0% | |
| AGCTGTAGGAAACGTTTAGA+TGG | + | chr3.1:78963155-78963174 | MS.gene06231:CDS | 40.0% | |
| ATGGAAGCTAACATGAACGA+TGG | - | chr3.1:78962574-78962593 | None:intergenic | 40.0% | |
| CAGTTTCTTGTCTTGTGGAT+GGG | + | chr3.1:78961922-78961941 | MS.gene06231:CDS | 40.0% | |
| CATGGCAGTAGAACTTGAAA+AGG | - | chr3.1:78964618-78964637 | None:intergenic | 40.0% | |
| CATGTATAGGTTTCATTCGC+TGG | + | chr3.1:78963109-78963128 | MS.gene06231:intron | 40.0% | |
| CCAAAACCAACAAGTACATG+TGG | + | chr3.1:78964703-78964722 | MS.gene06231:CDS | 40.0% | |
| CGAGTTTAAACACAAACGCA+AGG | - | chr3.1:78963000-78963019 | None:intergenic | 40.0% | |
| CTAACTAACCAACCTTACCT+TGG | - | chr3.1:78963253-78963272 | None:intergenic | 40.0% | |
| CTCATTTCTTCCTGTGAAAG+TGG | + | chr3.1:78964662-78964681 | MS.gene06231:CDS | 40.0% | |
| CTCTCAACACATAAGAAACC+TGG | + | chr3.1:78962683-78962702 | MS.gene06231:intron | 40.0% | |
| GAAGATCCTGAAGAAGAAGT+AGG | - | chr3.1:78961867-78961886 | None:intergenic | 40.0% | |
| GCATCATTAGACAAAGGAAG+TGG | - | chr3.1:78961819-78961838 | None:intergenic | 40.0% | |
| GCGTTTGTGTTTAAACTCGA+TGG | + | chr3.1:78963001-78963020 | MS.gene06231:intron | 40.0% | |
| GCTAACATGAACGATGGATA+AGG | - | chr3.1:78962568-78962587 | None:intergenic | 40.0% | |
| GTATCTTTGTGGGGATCTTT+AGG | - | chr3.1:78963437-78963456 | None:intergenic | 40.0% | |
| GTTAGACACAATACCGCAAA+AGG | - | chr3.1:78964203-78964222 | None:intergenic | 40.0% | |
| TCAACACATAAGAAACCTGG+AGG | + | chr3.1:78962686-78962705 | MS.gene06231:intron | 40.0% | |
| TCCAATTACCAAGGTAAGGT+TGG | + | chr3.1:78963242-78963261 | MS.gene06231:intron | 40.0% | |
| TTAAGACGGGTAGCAATGTT+TGG | + | chr3.1:78964095-78964114 | MS.gene06231:intron | 40.0% | |
| TTGGACAAAAAACTACCAGC+AGG | - | chr3.1:78963227-78963246 | None:intergenic | 40.0% | |
| TTTCTTCCTGTGAAAGTGGT+AGG | + | chr3.1:78964666-78964685 | MS.gene06231:CDS | 40.0% | |
| ! | AAAGCACCTTCTTGGGATTT+GGG | + | chr3.1:78961657-78961676 | MS.gene06231:CDS | 40.0% |
| ! | ACCAACCTTACCTTGGTAAT+TGG | - | chr3.1:78963246-78963265 | None:intergenic | 40.0% |
| ! | ATAGTCGAGACATTTTCTCG+TGG | + | chr3.1:78964169-78964188 | MS.gene06231:intron | 40.0% |
| ! | ATTTGAAGCTTGGTCAGGTT+GGG | + | chr3.1:78961772-78961791 | MS.gene06231:CDS | 40.0% |
| ! | GCTGTGGTTTTCTTCTTCTT+CGG | - | chr3.1:78963187-78963206 | None:intergenic | 40.0% |
| ! | GTTGGCAGAACCTTTGTTTA+AGG | - | chr3.1:78962040-78962059 | None:intergenic | 40.0% |
| ! | TAGGTTGAACACCTTCATCT+AGG | - | chr3.1:78963340-78963359 | None:intergenic | 40.0% |
| ! | TTGCTACTTGTCCTAAGAAG+AGG | - | chr3.1:78964842-78964861 | None:intergenic | 40.0% |
| !! | AATAGCTTTGAGTCCATGGA+AGG | + | chr3.1:78965028-78965047 | MS.gene06231:CDS | 40.0% |
| !! | AATTGTAACCTCTGGAGTCT+TGG | - | chr3.1:78962012-78962031 | None:intergenic | 40.0% |
| !! | GGAATTTGAAAGCACCTTCT+TGG | + | chr3.1:78961649-78961668 | MS.gene06231:CDS | 40.0% |
| !! | TGTTGATTTGAAGCTTGGTC+AGG | + | chr3.1:78961767-78961786 | MS.gene06231:CDS | 40.0% |
| !!! | CCACATGTACTTGTTGGTTT+TGG | - | chr3.1:78964706-78964725 | None:intergenic | 40.0% |
| !!! | CTTTTCAAGTTCTACTGCCA+TGG | + | chr3.1:78964616-78964635 | MS.gene06231:CDS | 40.0% |
| !!! | GTACTTGTTGGTTTTGGTTG+TGG | - | chr3.1:78964700-78964719 | None:intergenic | 40.0% |
| AAAGGGCTACCATTAGAGCA+AGG | + | chr3.1:78964039-78964058 | MS.gene06231:intron | 45.0% | |
| AAGCACCTTCTTGGGATTTG+GGG | + | chr3.1:78961658-78961677 | MS.gene06231:CDS | 45.0% | |
| AAGTTGCTTCCCTTCTCCAT+AGG | - | chr3.1:78964768-78964787 | None:intergenic | 45.0% | |
| ACGAAACCACACCTCTTCTT+AGG | + | chr3.1:78964828-78964847 | MS.gene06231:CDS | 45.0% | |
| ACTCCAAGCTGAATTCACCA+TGG | - | chr3.1:78964636-78964655 | None:intergenic | 45.0% | |
| ACTCTATCGCCTTGCTCTAA+TGG | - | chr3.1:78964051-78964070 | None:intergenic | 45.0% | |
| ACTTCATTCCAAGACTCCAG+AGG | + | chr3.1:78962001-78962020 | MS.gene06231:CDS | 45.0% | |
| ACTTGTCCTAAGAAGAGGTG+TGG | - | chr3.1:78964837-78964856 | None:intergenic | 45.0% | |
| AGGAAGTGGTGATTGATCAG+TGG | - | chr3.1:78961805-78961824 | None:intergenic | 45.0% | |
| AGGCCACAAATTGTAACCTC+TGG | - | chr3.1:78962020-78962039 | None:intergenic | 45.0% | |
| AGTTGCTTCCCTTCTCCATA+GGG | - | chr3.1:78964767-78964786 | None:intergenic | 45.0% | |
| ATGTGATTACGCAATGCCCT+TGG | + | chr3.1:78963502-78963521 | MS.gene06231:intron | 45.0% | |
| CAAACGCACTCATCTATCCA+AGG | - | chr3.1:78963522-78963541 | None:intergenic | 45.0% | |
| CAGACGCACACATCTGATAA+TGG | + | chr3.1:78964932-78964951 | MS.gene06231:CDS | 45.0% | |
| CATTGTTATCCTCAGTGGAC+TGG | + | chr3.1:78963297-78963316 | MS.gene06231:intron | 45.0% | |
| CTGGTATGTCGAACATGAGT+TGG | + | chr3.1:78962776-78962795 | MS.gene06231:intron | 45.0% | |
| GATCACTCTCACTCCCATTT+GGG | - | chr3.1:78965063-78965082 | None:intergenic | 45.0% | |
| GCAACACCTACTTCTTCTTC+AGG | + | chr3.1:78961858-78961877 | MS.gene06231:CDS | 45.0% | |
| GTCCACTGAGGATAACAATG+TGG | - | chr3.1:78963297-78963316 | None:intergenic | 45.0% | |
| GTGAATTCAGCTTGGAGTAG+CGG | + | chr3.1:78964638-78964657 | MS.gene06231:CDS | 45.0% | |
| GTGGACGTCAACTCTTAAGA+CGG | + | chr3.1:78964081-78964100 | MS.gene06231:intron | 45.0% | |
| TAATGGTAGCCCTTTCCTCT+CGG | - | chr3.1:78964034-78964053 | None:intergenic | 45.0% | |
| TGATCACTCTCACTCCCATT+TGG | - | chr3.1:78965064-78965083 | None:intergenic | 45.0% | |
| TGCATACGGGACATTGAATG+AGG | - | chr3.1:78964980-78964999 | None:intergenic | 45.0% | |
| TGGACGTCAACTCTTAAGAC+GGG | + | chr3.1:78964082-78964101 | MS.gene06231:intron | 45.0% | |
| TTAAGAGTTGACGTCCACAC+CGG | - | chr3.1:78964079-78964098 | None:intergenic | 45.0% | |
| ! | ATGGGTTCTGATGGATCACA+AGG | + | chr3.1:78965103-78965122 | MS.gene06231:CDS | 45.0% |
| ! | CGTGGACTTTAGTCCTTTTG+CGG | + | chr3.1:78964187-78964206 | MS.gene06231:intron | 45.0% |
| ! | GATTTGAAGCTTGGTCAGGT+TGG | + | chr3.1:78961771-78961790 | MS.gene06231:CDS | 45.0% |
| !! | AAGGAGTGTTGGTCCCAAAT+GGG | + | chr3.1:78965047-78965066 | MS.gene06231:CDS | 45.0% |
| !! | ATCGGGTTGGACTCTTTCAT+AGG | + | chr3.1:78963902-78963921 | MS.gene06231:intron | 45.0% |
| !! | GAAAGCACCTTCTTGGGATT+TGG | + | chr3.1:78961656-78961675 | MS.gene06231:CDS | 45.0% |
| !! | TATTAGGTAGGAGAGCGTCA+TGG | - | chr3.1:78964152-78964171 | None:intergenic | 45.0% |
| !! | TGTCGAACATGAGTTGGTGT+CGG | + | chr3.1:78962782-78962801 | MS.gene06231:intron | 45.0% |
| AATGTCCCGTATGCAGCCTT+TGG | + | chr3.1:78964985-78965004 | MS.gene06231:CDS | 50.0% | |
| ACTCAAACCCCCTATGGAGA+AGG | + | chr3.1:78964755-78964774 | MS.gene06231:CDS | 50.0% | |
| AGCACCTTCTTGGGATTTGG+GGG | + | chr3.1:78961659-78961678 | MS.gene06231:CDS | 50.0% | |
| ATACCCCCCAAATCCCAAGA+AGG | - | chr3.1:78961666-78961685 | None:intergenic | 50.0% | |
| ATGTCCCGTATGCAGCCTTT+GGG | + | chr3.1:78964986-78965005 | MS.gene06231:CDS | 50.0% | |
| CAAGGCGATAGAGTGAAAGC+CGG | + | chr3.1:78964057-78964076 | MS.gene06231:intron | 50.0% | |
| CATGCGTGTCAATGTCGTGT+CGG | - | chr3.1:78962811-78962830 | None:intergenic | 50.0% | |
| CTCAAACCCCCTATGGAGAA+GGG | + | chr3.1:78964756-78964775 | MS.gene06231:CDS | 50.0% | |
| CTGCCATGGTGAATTCAGCT+TGG | + | chr3.1:78964630-78964649 | MS.gene06231:CDS | 50.0% | |
| GAGCGCGACAGAGACATAAA+TGG | - | chr3.1:78963552-78963571 | None:intergenic | 50.0% | |
| GGTTCTACTCAAACCCCCTA+TGG | + | chr3.1:78964749-78964768 | MS.gene06231:CDS | 50.0% | |
| GTGAAGCCTACCACTTTCAC+AGG | - | chr3.1:78964675-78964694 | None:intergenic | 50.0% | |
| GTTGCTTCCCTTCTCCATAG+GGG | - | chr3.1:78964766-78964785 | None:intergenic | 50.0% | |
| TAGGGGGTTTGAGTAGAACC+AGG | - | chr3.1:78964749-78964768 | None:intergenic | 50.0% | |
| TCAGTCCCAAAGGCTGCATA+CGG | - | chr3.1:78964994-78965013 | None:intergenic | 50.0% | |
| TCGCGCTCATGGCAATCTAA+TGG | + | chr3.1:78963564-78963583 | MS.gene06231:intron | 50.0% | |
| TTATGTCTCTGTCGCGCTCA+TGG | + | chr3.1:78963553-78963572 | MS.gene06231:intron | 50.0% | |
| TTGCTTCCCTTCTCCATAGG+GGG | - | chr3.1:78964765-78964784 | None:intergenic | 50.0% | |
| ! | GACAGAAGAGAGAGAGCACA+AGG | - | chr3.1:78964905-78964924 | None:intergenic | 50.0% |
| ! | GGATTTGGGGGGTATAGAAG+AGG | + | chr3.1:78961671-78961690 | MS.gene06231:CDS | 50.0% |
| ! | TGAGTCCATGGAAGGAGTGT+TGG | + | chr3.1:78965036-78965055 | MS.gene06231:CDS | 50.0% |
| !! | GAAGGAGTGTTGGTCCCAAA+TGG | + | chr3.1:78965046-78965065 | MS.gene06231:CDS | 50.0% |
| AGATGAGTGAAACCGCCGAG+AGG | + | chr3.1:78964016-78964035 | MS.gene06231:intron | 55.0% | |
| AGTGAAACCGCCGAGAGGAA+AGG | + | chr3.1:78964021-78964040 | MS.gene06231:intron | 55.0% | |
| CAAATGGGTCCAGTCCACTG+AGG | - | chr3.1:78963309-78963328 | None:intergenic | 55.0% | |
| CAGTCCCAAAGGCTGCATAC+GGG | - | chr3.1:78964993-78965012 | None:intergenic | 55.0% | |
| CCATGCAGACTCAGTCCCAA+AGG | - | chr3.1:78965004-78965023 | None:intergenic | 55.0% | |
| CGATAGAGTGAAAGCCGGTG+TGG | + | chr3.1:78964062-78964081 | MS.gene06231:intron | 55.0% | |
| GCACCTTCTTGGGATTTGGG+GGG | + | chr3.1:78961660-78961679 | MS.gene06231:CDS | 55.0% | |
| GGTTCTGCCAACAGTGTAGC+AGG | + | chr3.1:78962048-78962067 | MS.gene06231:CDS | 55.0% | |
| GTGAAACCGCCGAGAGGAAA+GGG | + | chr3.1:78964022-78964041 | MS.gene06231:intron | 55.0% | |
| TGGGACCAACACTCCTTCCA+TGG | - | chr3.1:78965044-78965063 | None:intergenic | 55.0% | |
| !! | CCTTTGGGACTGAGTCTGCA+TGG | + | chr3.1:78965001-78965020 | MS.gene06231:CDS | 55.0% |
| CGCGTGATAGGTTCAGGCTG+TGG | - | chr3.1:78963203-78963222 | None:intergenic | 60.0% | |
| CTACCAGCAGGTCGCGTGAT+AGG | - | chr3.1:78963215-78963234 | None:intergenic | 60.0% | |
| GAACCTATCACGCGACCTGC+TGG | + | chr3.1:78963209-78963228 | MS.gene06231:CDS | 60.0% | |
| GCAGGTCGCGTGATAGGTTC+AGG | - | chr3.1:78963209-78963228 | None:intergenic | 60.0% | |
| TGGTAGCCCTTTCCTCTCGG+CGG | - | chr3.1:78964031-78964050 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 78961642 | 78965165 | 78961642 | ID=MS.gene06231 |
| chr3.1 | mRNA | 78961642 | 78965165 | 78961642 | ID=MS.gene06231.t1;Parent=MS.gene06231 |
| chr3.1 | exon | 78961642 | 78962069 | 78961642 | ID=MS.gene06231.t1.exon1;Parent=MS.gene06231.t1 |
| chr3.1 | CDS | 78961642 | 78962069 | 78961642 | ID=cds.MS.gene06231.t1;Parent=MS.gene06231.t1 |
| chr3.1 | exon | 78963118 | 78963254 | 78963118 | ID=MS.gene06231.t1.exon2;Parent=MS.gene06231.t1 |
| chr3.1 | CDS | 78963118 | 78963254 | 78963118 | ID=cds.MS.gene06231.t1;Parent=MS.gene06231.t1 |
| chr3.1 | exon | 78964600 | 78965165 | 78964600 | ID=MS.gene06231.t1.exon3;Parent=MS.gene06231.t1 |
| chr3.1 | CDS | 78964600 | 78965165 | 78964600 | ID=cds.MS.gene06231.t1;Parent=MS.gene06231.t1 |
| Gene Sequence |
| Protein sequence |
