Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062630.t1 | PNX73002.1 | 48.1 | 799 | 122 | 7 | 54 | 593 | 1 | 765 | 4.90E-179 | 637.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062630.t1 | Q9SZL8 | 32.6 | 221 | 132 | 6 | 54 | 259 | 77 | 295 | 5.2e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062630.t1 | A0A2K3L384 | 48.1 | 799 | 122 | 7 | 54 | 593 | 1 | 765 | 3.5e-179 | 637.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene062630.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062630.t1 | MTR_0645s0010 | 97.561 | 82 | 2 | 0 | 252 | 333 | 44 | 125 | 1.71e-47 | 162 |
| MS.gene062630.t1 | MTR_7g446520 | 40.952 | 210 | 109 | 1 | 43 | 252 | 81 | 275 | 5.17e-44 | 160 |
| MS.gene062630.t1 | MTR_7g446480 | 48.062 | 129 | 67 | 0 | 124 | 252 | 140 | 268 | 1.01e-32 | 128 |
| MS.gene062630.t1 | MTR_7g446510 | 45.926 | 135 | 73 | 0 | 118 | 252 | 149 | 283 | 2.53e-31 | 125 |
| MS.gene062630.t1 | MTR_7g028855 | 43.046 | 151 | 83 | 1 | 43 | 190 | 113 | 263 | 2.90e-30 | 124 |
| MS.gene062630.t1 | MTR_1g070355 | 32.031 | 256 | 156 | 6 | 6 | 252 | 31 | 277 | 2.15e-28 | 120 |
| MS.gene062630.t1 | MTR_5g076070 | 28.796 | 191 | 130 | 2 | 25 | 209 | 25 | 215 | 1.81e-24 | 103 |
| MS.gene062630.t1 | MTR_4g035820 | 30.233 | 258 | 156 | 8 | 8 | 252 | 36 | 282 | 2.89e-21 | 98.6 |
| MS.gene062630.t1 | MTR_6g022080 | 28.070 | 171 | 120 | 1 | 42 | 209 | 77 | 247 | 1.03e-20 | 92.4 |
| MS.gene062630.t1 | MTR_0402s0040 | 34.682 | 173 | 108 | 5 | 54 | 223 | 30 | 200 | 3.30e-20 | 94.7 |
| MS.gene062630.t1 | MTR_8g035530 | 51.429 | 70 | 34 | 0 | 41 | 110 | 5 | 74 | 1.89e-18 | 80.5 |
| MS.gene062630.t1 | MTR_3g080590 | 43.820 | 89 | 48 | 1 | 12 | 100 | 69 | 155 | 1.29e-16 | 77.8 |
| MS.gene062630.t1 | MTR_6g051425 | 27.149 | 221 | 134 | 8 | 58 | 257 | 25 | 239 | 9.85e-15 | 76.3 |
| MS.gene062630.t1 | MTR_1g008290 | 30.065 | 153 | 94 | 4 | 90 | 242 | 1 | 140 | 4.67e-14 | 70.1 |
| MS.gene062630.t1 | MTR_5g015480 | 34.959 | 123 | 72 | 5 | 54 | 171 | 60 | 179 | 1.09e-13 | 72.0 |
| MS.gene062630.t1 | MTR_3g450850 | 28.708 | 209 | 136 | 6 | 56 | 252 | 53 | 260 | 3.32e-12 | 68.6 |
| MS.gene062630.t1 | MTR_8g468460 | 39.583 | 96 | 56 | 2 | 252 | 346 | 11 | 105 | 5.31e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062630.t1 | AT4G38180 | 31.674 | 221 | 136 | 4 | 53 | 259 | 76 | 295 | 7.34e-22 | 100 |
| MS.gene062630.t1 | AT4G38180 | 27.835 | 194 | 125 | 5 | 210 | 391 | 448 | 638 | 4.45e-11 | 66.6 |
| MS.gene062630.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 1.93e-17 | 86.7 |
| MS.gene062630.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 1.93e-17 | 86.7 |
| MS.gene062630.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 1.97e-17 | 86.7 |
| MS.gene062630.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 2.43e-17 | 86.3 |
| MS.gene062630.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 2.56e-17 | 86.3 |
| MS.gene062630.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.02e-15 | 81.3 |
| MS.gene062630.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.02e-15 | 81.3 |
| MS.gene062630.t1 | AT3G07500 | 32.749 | 171 | 89 | 7 | 54 | 213 | 37 | 192 | 5.84e-13 | 68.9 |
| MS.gene062630.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 2.98e-11 | 67.0 |
| MS.gene062630.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 2.98e-11 | 67.0 |
| MS.gene062630.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 2.98e-11 | 67.0 |
| MS.gene062630.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 2.98e-11 | 67.0 |
| MS.gene062630.t1 | AT4G15090 | 24.691 | 324 | 206 | 11 | 251 | 554 | 474 | 779 | 2.98e-11 | 67.0 |
| MS.gene062630.t1 | AT4G38170 | 26.316 | 190 | 125 | 5 | 210 | 387 | 213 | 399 | 4.27e-11 | 66.2 |
Find 118 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATATTAACTGTAATATT+TGG | 0.204657 | 6.4:-46935982 | None:intergenic |
| TTCATTTGATTCCGAATTAT+AGG | 0.217986 | 6.4:+46933818 | MS.gene062630:CDS |
| TTCCTCATTATGACCTTCTT+TGG | 0.219846 | 6.4:-46935186 | None:intergenic |
| ATGATTTCATTCAGAAGATT+TGG | 0.259205 | 6.4:+46933740 | MS.gene062630:CDS |
| AATGTCTATATTTGTTGTTT+TGG | 0.267598 | 6.4:-46935935 | None:intergenic |
| TCATATACTAGGTTTCTTAA+TGG | 0.276146 | 6.4:+46933903 | MS.gene062630:CDS |
| TTCAGTAGTGATAATGGTTT+TGG | 0.283086 | 6.4:+46933409 | MS.gene062630:CDS |
| CATGATGTTGATAATATCTT+TGG | 0.283165 | 6.4:+46935850 | MS.gene062630:CDS |
| AGAAGAATGAAGATAGTAAT+AGG | 0.287511 | 6.4:+46933674 | MS.gene062630:CDS |
| GGAATCAAATGAACAAGATT+TGG | 0.296397 | 6.4:-46933808 | None:intergenic |
| AACAACATTCCTTTGTTTCC+TGG | 0.297613 | 6.4:+46936263 | MS.gene062630:CDS |
| TCACTCAATTTCCTATAATT+CGG | 0.322105 | 6.4:-46933829 | None:intergenic |
| CATATACTAGGTTTCTTAAT+GGG | 0.328869 | 6.4:+46933904 | MS.gene062630:CDS |
| GGTTTCTTAATGGGCCAAAA+AGG | 0.332076 | 6.4:+46933913 | MS.gene062630:CDS |
| GTAGAATTCAGTAGTGATAA+TGG | 0.335573 | 6.4:+46933403 | MS.gene062630:CDS |
| ACTTAGTTCATGGTTGTGAT+TGG | 0.360489 | 6.4:-46933782 | None:intergenic |
| GAAGTTAATCCACCCACATT+TGG | 0.365859 | 6.4:-46936200 | None:intergenic |
| CACTTACCGCTGCATTCAAT+AGG | 0.379313 | 6.4:+46935234 | MS.gene062630:CDS |
| CTTAGTTCATGGTTGTGATT+GGG | 0.381070 | 6.4:-46933781 | None:intergenic |
| GAGTTTACCTTTACAGATGA+TGG | 0.397514 | 6.4:+46934081 | MS.gene062630:CDS |
| TAACAATGCCATTGATTATG+AGG | 0.400069 | 6.4:+46935274 | MS.gene062630:CDS |
| AAAGTTCCTAGAAGTCAAAA+AGG | 0.400507 | 6.4:+46934878 | MS.gene062630:CDS |
| GTGTTGACAACTTCCTTGCC+TGG | 0.404467 | 6.4:+46934819 | MS.gene062630:CDS |
| CATTTGGTACTGACATAGAA+TGG | 0.405927 | 6.4:-46935822 | None:intergenic |
| CTACAGACATAATGAATTGT+TGG | 0.407345 | 6.4:+46934767 | MS.gene062630:CDS |
| AATCTTCTGAATGAAATCAT+AGG | 0.410758 | 6.4:-46933737 | None:intergenic |
| AAAGGAGGACATGAAAATCT+TGG | 0.412933 | 6.4:+46933931 | MS.gene062630:CDS |
| AAATGTCAATGGCAACAATA+AGG | 0.413929 | 6.4:+46935352 | MS.gene062630:CDS |
| GATTTGGAGGACTTAGTTCA+TGG | 0.422475 | 6.4:-46933792 | None:intergenic |
| TCGGATAAACAGATTGTTAG+TGG | 0.430560 | 6.4:+46933853 | MS.gene062630:CDS |
| TAACATACACTATTTGTTCC+AGG | 0.434470 | 6.4:-46936281 | None:intergenic |
| AAAGCGTATGCTCGTTTCCA+TGG | 0.435800 | 6.4:+46933550 | MS.gene062630:CDS |
| ACAGTTTACGAGCGTGTTGA+AGG | 0.436704 | 6.4:+46936382 | MS.gene062630:intron |
| CAAGGAAGGGTTAGAATTGA+AGG | 0.441504 | 6.4:+46933991 | MS.gene062630:CDS |
| TCAACATCATGTCTACCATT+TGG | 0.448971 | 6.4:-46935838 | None:intergenic |
| CATTGATTATGAGGAAGCTT+TGG | 0.458582 | 6.4:+46935283 | MS.gene062630:CDS |
| CTCATTATGACCTTCTTTGG+AGG | 0.460106 | 6.4:-46935183 | None:intergenic |
| AATAGGCAAACCATGCGAAC+TGG | 0.460478 | 6.4:+46933691 | MS.gene062630:CDS |
| AAAGTCTAATTTGCAAAAGA+TGG | 0.463829 | 6.4:+46935123 | MS.gene062630:CDS |
| GTTAGTGGTTTGCATTCTCA+AGG | 0.476835 | 6.4:+46933868 | MS.gene062630:CDS |
| ATGCTGAGTTGCTTCACTAT+AGG | 0.481546 | 6.4:-46933359 | None:intergenic |
| GCGATTACTTTGCAATAAAG+AGG | 0.481547 | 6.4:+46933630 | MS.gene062630:CDS |
| GTTTCCATGGGTTTGTCGTA+AGG | 0.482758 | 6.4:+46933563 | MS.gene062630:CDS |
| GGGTTTCATCATTCATGTCA+TGG | 0.487067 | 6.4:-46935801 | None:intergenic |
| ATTTGGTACTGACATAGAAT+GGG | 0.493491 | 6.4:-46935821 | None:intergenic |
| CAAAGCTTCCTCATAATCAA+TGG | 0.494233 | 6.4:-46935282 | None:intergenic |
| GAAGCTTCACGCTCAAATCC+AGG | 0.499670 | 6.4:-46934837 | None:intergenic |
| TCATCATTTGCCTCCAAAGA+AGG | 0.501389 | 6.4:+46935173 | MS.gene062630:CDS |
| CAAGATGGAACCATGGTGTT+GGG | 0.503043 | 6.4:+46936132 | MS.gene062630:CDS |
| AACTTCTTCACAATTCCCTC+CGG | 0.506498 | 6.4:+46936217 | MS.gene062630:CDS |
| AAATGATGATATAAAAGCTA+TGG | 0.514775 | 6.4:+46933492 | MS.gene062630:CDS |
| GTCACTCACCATGCTGAGGT+TGG | 0.515437 | 6.4:+46934927 | MS.gene062630:CDS |
| TTATAGGAAATTGAGTGAAT+CGG | 0.515530 | 6.4:+46933834 | MS.gene062630:CDS |
| AAGGAAGGATGATGTGGTAA+AGG | 0.518755 | 6.4:+46933582 | MS.gene062630:CDS |
| CCATGGGTTTGTCGTAAGGA+AGG | 0.524385 | 6.4:+46933567 | MS.gene062630:CDS |
| CGTCGTGAGGGAAATGTCAA+TGG | 0.525065 | 6.4:+46935341 | MS.gene062630:CDS |
| TGCCACATGGATTTGCAAGA+TGG | 0.527779 | 6.4:+46936117 | MS.gene062630:CDS |
| GTAAGAACCTGTCATATACT+AGG | 0.532163 | 6.4:+46933892 | MS.gene062630:CDS |
| GATTATGAGGAAGCTTTGGA+AGG | 0.532969 | 6.4:+46935287 | MS.gene062630:CDS |
| TAACCGACCATCATCTGTAA+AGG | 0.533842 | 6.4:-46934088 | None:intergenic |
| AAATGGTCATGTTCCGCCGA+TGG | 0.535969 | 6.4:+46935210 | MS.gene062630:CDS |
| ATCAAATGAACAAGATTTGG+AGG | 0.541540 | 6.4:-46933805 | None:intergenic |
| AATGGTCATGTTCCGCCGAT+GGG | 0.542538 | 6.4:+46935211 | MS.gene062630:CDS |
| AAGCGTATGCTCGTTTCCAT+GGG | 0.546934 | 6.4:+46933551 | MS.gene062630:CDS |
| ACTTCATGACAGAAATAATG+TGG | 0.547790 | 6.4:-46935076 | None:intergenic |
| CCACCGTACACAGGAAAAGC+GGG | 0.548539 | 6.4:-46936173 | None:intergenic |
| TAAGAAACCTAGTATATGAC+AGG | 0.549198 | 6.4:-46933899 | None:intergenic |
| CATTCTATGTCAGTACCAAA+TGG | 0.549713 | 6.4:+46935823 | MS.gene062630:CDS |
| GGTATTAAACGTAAGAGAGA+TGG | 0.556812 | 6.4:+46935871 | MS.gene062630:CDS |
| AAGAGAGATGGTGACAAAGC+CGG | 0.567634 | 6.4:+46935883 | MS.gene062630:CDS |
| ACAGAAATAATGTGGGAACA+TGG | 0.568395 | 6.4:-46935068 | None:intergenic |
| AGCAAGACATCCAGTTCGCA+TGG | 0.572129 | 6.4:-46933701 | None:intergenic |
| GCAAGATGGAACCATGGTGT+TGG | 0.572620 | 6.4:+46936131 | MS.gene062630:CDS |
| AACCATGGTGTTGGGTATGT+TGG | 0.578818 | 6.4:+46936140 | MS.gene062630:CDS |
| ATTATGAGGAAGCTTTGGAA+GGG | 0.579688 | 6.4:+46935288 | MS.gene062630:CDS |
| CGATTACTTTGCAATAAAGA+GGG | 0.582695 | 6.4:+46933631 | MS.gene062630:CDS |
| GGAATGTTGTTATAATGTGA+TGG | 0.585101 | 6.4:-46936251 | None:intergenic |
| ATTTGGAGTCACAGAAGCAT+CGG | 0.589265 | 6.4:-46935965 | None:intergenic |
| GTACGGTGGGATTCCAAATG+TGG | 0.589315 | 6.4:+46936187 | MS.gene062630:CDS |
| AAGATAAATGTACGTCGTGA+GGG | 0.589836 | 6.4:+46935329 | MS.gene062630:CDS |
| GGCAAGGAAGTTGTCAACAC+AGG | 0.590629 | 6.4:-46934816 | None:intergenic |
| TGCATTCAATAGGCTTTGTG+AGG | 0.594478 | 6.4:+46935244 | MS.gene062630:CDS |
| TATAACTACACTGATCATCA+AGG | 0.599053 | 6.4:+46933973 | MS.gene062630:CDS |
| CTCCAAAGAAGGTCATAATG+AGG | 0.600558 | 6.4:+46935184 | MS.gene062630:CDS |
| CAAGATAAATGTACGTCGTG+AGG | 0.601675 | 6.4:+46935328 | MS.gene062630:CDS |
| ACTACACTGATCATCAAGGA+AGG | 0.601680 | 6.4:+46933977 | MS.gene062630:CDS |
| CAGCGGTAAGTGCCCATCGG+CGG | 0.602402 | 6.4:-46935223 | None:intergenic |
| CACTATTTCCAACCTCAGCA+TGG | 0.602509 | 6.4:-46934935 | None:intergenic |
| TACGGTGGGATTCCAAATGT+GGG | 0.603843 | 6.4:+46936188 | MS.gene062630:CDS |
| CCCACCGTACACAGGAAAAG+CGG | 0.608963 | 6.4:-46936174 | None:intergenic |
| TTCACGCTCAAATCCAGGCA+AGG | 0.610482 | 6.4:-46934832 | None:intergenic |
| TACGAGCGTGTTGAAGGACA+TGG | 0.612523 | 6.4:+46936388 | MS.gene062630:CDS |
| TTGTAGAATGGTATGCCACA+TGG | 0.614759 | 6.4:+46936104 | MS.gene062630:intron |
| ATCTGTCACTCACCATGCTG+AGG | 0.616402 | 6.4:+46934923 | MS.gene062630:CDS |
| TGTCGTAAGGAAGGATGATG+TGG | 0.617262 | 6.4:+46933576 | MS.gene062630:CDS |
| CTATTTGTTCCAGGAAACAA+AGG | 0.620146 | 6.4:-46936272 | None:intergenic |
| TGTTGTTATAATGTGATGGA+AGG | 0.624294 | 6.4:-46936247 | None:intergenic |
| CCTTCCTTACGACAAACCCA+TGG | 0.631542 | 6.4:-46933567 | None:intergenic |
| TTACCTTTACAGATGATGGT+CGG | 0.632472 | 6.4:+46934085 | MS.gene062630:CDS |
| AGAAAGACAGAGAATTGCAA+TGG | 0.633911 | 6.4:+46933445 | MS.gene062630:CDS |
| CTTCATGACAGAAATAATGT+GGG | 0.634223 | 6.4:-46935075 | None:intergenic |
| TTTGGAATCCCACCGTACAC+AGG | 0.642001 | 6.4:-46936182 | None:intergenic |
| TCTCGATAATGATACTGTAG+AGG | 0.643267 | 6.4:+46933381 | MS.gene062630:CDS |
| ATGCAGCGGTAAGTGCCCAT+CGG | 0.647794 | 6.4:-46935226 | None:intergenic |
| TGTCATGAAGTATGAGAACA+TGG | 0.649925 | 6.4:+46935088 | MS.gene062630:CDS |
| CTACACTGATCATCAAGGAA+GGG | 0.653825 | 6.4:+46933978 | MS.gene062630:CDS |
| GGTGGGATTCCAAATGTGGG+TGG | 0.655522 | 6.4:+46936191 | MS.gene062630:CDS |
| TGTGATGGAAGGATGTCTGC+CGG | 0.655796 | 6.4:-46936236 | None:intergenic |
| GGAAGGGTTAGAATTGAAGG+TGG | 0.663188 | 6.4:+46933994 | MS.gene062630:CDS |
| ACAAAGCCTATTGAATGCAG+CGG | 0.663816 | 6.4:-46935240 | None:intergenic |
| TGATGTGGTAAAGGATCACG+AGG | 0.665235 | 6.4:+46933591 | MS.gene062630:CDS |
| ATGGAAGGATGTCTGCCGGA+GGG | 0.699279 | 6.4:-46936232 | None:intergenic |
| AGCTATGGAGTTTAGCACAG+AGG | 0.706449 | 6.4:+46933507 | MS.gene062630:CDS |
| TACCAACATACCCAACACCA+TGG | 0.713448 | 6.4:-46936142 | None:intergenic |
| TTCCATCTTGCAAATCCATG+TGG | 0.717728 | 6.4:-46936119 | None:intergenic |
| GGATTTGCAAGATGGAACCA+TGG | 0.726905 | 6.4:+46936125 | MS.gene062630:CDS |
| GATGGAAGGATGTCTGCCGG+AGG | 0.734244 | 6.4:-46936233 | None:intergenic |
| GATGTGGTAAAGGATCACGA+GGG | 0.855257 | 6.4:+46933592 | MS.gene062630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAAGTTTTAAAAAAT+TGG | - | chr6.4:46936309-46936328 | None:intergenic | 10.0% |
| !! | AAATCTTGGATTTATAAAAA+AGG | + | chr6.4:46933945-46933964 | MS.gene062630:CDS | 15.0% |
| !! | TCAATATTAACTGTAATATT+TGG | - | chr6.4:46935985-46936004 | None:intergenic | 15.0% |
| !!! | TGTATGATTTTTTCATTTTA+GGG | - | chr6.4:46935427-46935446 | None:intergenic | 15.0% |
| !!! | TTGTATGATTTTTTCATTTT+AGG | - | chr6.4:46935428-46935447 | None:intergenic | 15.0% |
| !! | AAATGATGATATAAAAGCTA+TGG | + | chr6.4:46933492-46933511 | MS.gene062630:CDS | 20.0% |
| !! | ATATAAATTGAAGCAAATGT+GGG | + | chr6.4:46934599-46934618 | MS.gene062630:intron | 20.0% |
| !!! | AATGTCTATATTTGTTGTTT+TGG | - | chr6.4:46935938-46935957 | None:intergenic | 20.0% |
| !!! | GTATGATTTTTTCATTTTAG+GGG | - | chr6.4:46935426-46935445 | None:intergenic | 20.0% |
| !!! | TCGGTTAGAAAATATATTTT+GGG | + | chr6.4:46934104-46934123 | MS.gene062630:intron | 20.0% |
| !!! | TGGAAATAGTGTAATTTTTA+GGG | + | chr6.4:46934947-46934966 | MS.gene062630:CDS | 20.0% |
| !!! | TTGGAAATAGTGTAATTTTT+AGG | + | chr6.4:46934946-46934965 | MS.gene062630:CDS | 20.0% |
| ! | AAACAATAGAGACATATAAG+TGG | + | chr6.4:46934286-46934305 | MS.gene062630:intron | 25.0% |
| ! | AACAATAGAGACATATAAGT+GGG | + | chr6.4:46934287-46934306 | MS.gene062630:intron | 25.0% |
| ! | AATCCTGTAAAAATTACAAG+CGG | - | chr6.4:46934216-46934235 | None:intergenic | 25.0% |
| ! | AATCTTCTGAATGAAATCAT+AGG | - | chr6.4:46933740-46933759 | None:intergenic | 25.0% |
| ! | AATTAAAGCACATGCAAAAA+TGG | - | chr6.4:46934259-46934278 | None:intergenic | 25.0% |
| ! | AATTATGCAGAAAATCAACA+AGG | - | chr6.4:46934728-46934747 | None:intergenic | 25.0% |
| ! | AGAAGAATGAAGATAGTAAT+AGG | + | chr6.4:46933674-46933693 | MS.gene062630:CDS | 25.0% |
| ! | ATGATTTCATTCAGAAGATT+TGG | + | chr6.4:46933740-46933759 | MS.gene062630:CDS | 25.0% |
| ! | ATGGTCAAAAACAATAAAGA+AGG | + | chr6.4:46935142-46935161 | MS.gene062630:CDS | 25.0% |
| ! | CATATAAATTGAAGCAAATG+TGG | + | chr6.4:46934598-46934617 | MS.gene062630:intron | 25.0% |
| ! | CATATACTAGGTTTCTTAAT+GGG | + | chr6.4:46933904-46933923 | MS.gene062630:CDS | 25.0% |
| ! | TCACTCAATTTCCTATAATT+CGG | - | chr6.4:46933832-46933851 | None:intergenic | 25.0% |
| ! | TCATATACTAGGTTTCTTAA+TGG | + | chr6.4:46933903-46933922 | MS.gene062630:CDS | 25.0% |
| ! | TTATAGGAAATTGAGTGAAT+CGG | + | chr6.4:46933834-46933853 | MS.gene062630:CDS | 25.0% |
| ! | TTCATTTGATTCCGAATTAT+AGG | + | chr6.4:46933818-46933837 | MS.gene062630:CDS | 25.0% |
| !! | AAAGGTAAACTCTGAAAAAA+AGG | - | chr6.4:46934073-46934092 | None:intergenic | 25.0% |
| !! | AAAGTCTAATTTGCAAAAGA+TGG | + | chr6.4:46935123-46935142 | MS.gene062630:CDS | 25.0% |
| !! | ATACCTGTTCTTTTTATAAG+TGG | - | chr6.4:46934187-46934206 | None:intergenic | 25.0% |
| !! | GTCGGTTAGAAAATATATTT+TGG | + | chr6.4:46934103-46934122 | MS.gene062630:intron | 25.0% |
| !! | TTTTGCAAATTAGACTTTCT+GGG | - | chr6.4:46935121-46935140 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTTTTATGTCC+AGG | + | chr6.4:46935768-46935787 | MS.gene062630:intron | 25.0% |
| !!! | ATGTTTTGATTGTTGTAGAA+TGG | + | chr6.4:46936092-46936111 | MS.gene062630:intron | 25.0% |
| !!! | CATGATGTTGATAATATCTT+TGG | + | chr6.4:46935850-46935869 | MS.gene062630:CDS | 25.0% |
| AAAGTTCCTAGAAGTCAAAA+AGG | + | chr6.4:46934878-46934897 | MS.gene062630:CDS | 30.0% | |
| AAATGTCAATGGCAACAATA+AGG | + | chr6.4:46935352-46935371 | MS.gene062630:CDS | 30.0% | |
| AAGGTCAATAAATCTGTTGT+TGG | + | chr6.4:46935371-46935390 | MS.gene062630:intron | 30.0% | |
| AAGGTGTGAATTCATTTATC+AGG | + | chr6.4:46934679-46934698 | MS.gene062630:intron | 30.0% | |
| ACTTCATGACAGAAATAATG+TGG | - | chr6.4:46935079-46935098 | None:intergenic | 30.0% | |
| AGGTCATAATGAGGAAAAAA+TGG | + | chr6.4:46935193-46935212 | MS.gene062630:CDS | 30.0% | |
| ATCAAATGAACAAGATTTGG+AGG | - | chr6.4:46933808-46933827 | None:intergenic | 30.0% | |
| ATGGTGTATCAAAGAATAAG+TGG | + | chr6.4:46934565-46934584 | MS.gene062630:intron | 30.0% | |
| CGATTACTTTGCAATAAAGA+GGG | + | chr6.4:46933631-46933650 | MS.gene062630:CDS | 30.0% | |
| CTACAGACATAATGAATTGT+TGG | + | chr6.4:46934767-46934786 | MS.gene062630:CDS | 30.0% | |
| CTTCATGACAGAAATAATGT+GGG | - | chr6.4:46935078-46935097 | None:intergenic | 30.0% | |
| GGAATCAAATGAACAAGATT+TGG | - | chr6.4:46933811-46933830 | None:intergenic | 30.0% | |
| GGAATGTTGTTATAATGTGA+TGG | - | chr6.4:46936254-46936273 | None:intergenic | 30.0% | |
| GTAGAATTCAGTAGTGATAA+TGG | + | chr6.4:46933403-46933422 | MS.gene062630:CDS | 30.0% | |
| TAACATACACTATTTGTTCC+AGG | - | chr6.4:46936284-46936303 | None:intergenic | 30.0% | |
| TAAGAAACCTAGTATATGAC+AGG | - | chr6.4:46933902-46933921 | None:intergenic | 30.0% | |
| TATAACTACACTGATCATCA+AGG | + | chr6.4:46933973-46933992 | MS.gene062630:CDS | 30.0% | |
| TGGTGTATCAAAGAATAAGT+GGG | + | chr6.4:46934566-46934585 | MS.gene062630:intron | 30.0% | |
| ! | AGGCTTGATTATGAATGTTT+TGG | + | chr6.4:46934141-46934160 | MS.gene062630:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTTTC+TGG | - | chr6.4:46935122-46935141 | None:intergenic | 30.0% |
| ! | GGTGTTAAATGTGTTTTCAA+AGG | + | chr6.4:46934308-46934327 | MS.gene062630:intron | 30.0% |
| ! | TAACAATGCCATTGATTATG+AGG | + | chr6.4:46935274-46935293 | MS.gene062630:CDS | 30.0% |
| ! | TGTTGTTATAATGTGATGGA+AGG | - | chr6.4:46936250-46936269 | None:intergenic | 30.0% |
| ! | TTGAACTCTTCTAAGAATCT+GGG | - | chr6.4:46934477-46934496 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTTTCGTACA+TGG | - | chr6.4:46934334-46934353 | None:intergenic | 30.0% |
| !! | ATTTGGTACTGACATAGAAT+GGG | - | chr6.4:46935824-46935843 | None:intergenic | 30.0% |
| !! | GCTACTTTGAGTTATTTTCA+GGG | + | chr6.4:46934027-46934046 | MS.gene062630:CDS | 30.0% |
| !!! | GATAATGGTTTTGGTAATGA+TGG | + | chr6.4:46933418-46933437 | MS.gene062630:CDS | 30.0% |
| !!! | TGCTACTTTGAGTTATTTTC+AGG | + | chr6.4:46934026-46934045 | MS.gene062630:CDS | 30.0% |
| !!! | TTCAGTAGTGATAATGGTTT+TGG | + | chr6.4:46933409-46933428 | MS.gene062630:CDS | 30.0% |
| !!! | TTTTTAGGGTTAACGTTTAC+CGG | + | chr6.4:46934961-46934980 | MS.gene062630:CDS | 30.0% |
| AAAGGAGGACATGAAAATCT+TGG | + | chr6.4:46933931-46933950 | MS.gene062630:CDS | 35.0% | |
| AAGAGAGTTGTTGACAGTTA+TGG | + | chr6.4:46934546-46934565 | MS.gene062630:intron | 35.0% | |
| AAGATAAATGTACGTCGTGA+GGG | + | chr6.4:46935329-46935348 | MS.gene062630:CDS | 35.0% | |
| ACAGAAATAATGTGGGAACA+TGG | - | chr6.4:46935071-46935090 | None:intergenic | 35.0% | |
| ACAGCAAATTCATCACAAGA+TGG | - | chr6.4:46935738-46935757 | None:intergenic | 35.0% | |
| ACATCAATTCCAGCAAGTAT+TGG | - | chr6.4:46935521-46935540 | None:intergenic | 35.0% | |
| ACGCCACTTATAAAAAGAAC+AGG | + | chr6.4:46934181-46934200 | MS.gene062630:intron | 35.0% | |
| ACTTAGTTCATGGTTGTGAT+TGG | - | chr6.4:46933785-46933804 | None:intergenic | 35.0% | |
| AGAAAGACAGAGAATTGCAA+TGG | + | chr6.4:46933445-46933464 | MS.gene062630:CDS | 35.0% | |
| AGAAGTCAAAAAGGCGATAA+AGG | + | chr6.4:46934887-46934906 | MS.gene062630:CDS | 35.0% | |
| CAAAGCTTCCTCATAATCAA+TGG | - | chr6.4:46935285-46935304 | None:intergenic | 35.0% | |
| CATTCTATGTCAGTACCAAA+TGG | + | chr6.4:46935823-46935842 | MS.gene062630:CDS | 35.0% | |
| CTATTTGTTCCAGGAAACAA+AGG | - | chr6.4:46936275-46936294 | None:intergenic | 35.0% | |
| CTTAGTTCATGGTTGTGATT+GGG | - | chr6.4:46933784-46933803 | None:intergenic | 35.0% | |
| GAGATGTATTTCCGAATTCA+AGG | + | chr6.4:46934397-46934416 | MS.gene062630:intron | 35.0% | |
| GAGTTTACCTTTACAGATGA+TGG | + | chr6.4:46934081-46934100 | MS.gene062630:CDS | 35.0% | |
| GCGATTACTTTGCAATAAAG+AGG | + | chr6.4:46933630-46933649 | MS.gene062630:CDS | 35.0% | |
| GGATAAAGAAGAAGATGAGA+AGG | + | chr6.4:46935571-46935590 | MS.gene062630:intron | 35.0% | |
| GGTATTAAACGTAAGAGAGA+TGG | + | chr6.4:46935871-46935890 | MS.gene062630:CDS | 35.0% | |
| GTAAGAACCTGTCATATACT+AGG | + | chr6.4:46933892-46933911 | MS.gene062630:CDS | 35.0% | |
| TCAACATCATGTCTACCATT+TGG | - | chr6.4:46935841-46935860 | None:intergenic | 35.0% | |
| TCGGATAAACAGATTGTTAG+TGG | + | chr6.4:46933853-46933872 | MS.gene062630:CDS | 35.0% | |
| TCTCGATAATGATACTGTAG+AGG | + | chr6.4:46933381-46933400 | MS.gene062630:CDS | 35.0% | |
| TGATGTCACATTTGTAGATG+AGG | + | chr6.4:46935535-46935554 | MS.gene062630:intron | 35.0% | |
| TGTCATGAAGTATGAGAACA+TGG | + | chr6.4:46935088-46935107 | MS.gene062630:CDS | 35.0% | |
| TTCCTCATTATGACCTTCTT+TGG | - | chr6.4:46935189-46935208 | None:intergenic | 35.0% | |
| TTCTAACTCCACACACAAAA+TGG | - | chr6.4:46934644-46934663 | None:intergenic | 35.0% | |
| ! | AACAACATTCCTTTGTTTCC+TGG | + | chr6.4:46936263-46936282 | MS.gene062630:CDS | 35.0% |
| ! | AAGCCGCTTGTAATTTTTAC+AGG | + | chr6.4:46934210-46934229 | MS.gene062630:intron | 35.0% |
| ! | AGAGTCTTGTGTTGAAAAAC+CGG | - | chr6.4:46935905-46935924 | None:intergenic | 35.0% |
| ! | CATTGATTATGAGGAAGCTT+TGG | + | chr6.4:46935283-46935302 | MS.gene062630:CDS | 35.0% |
| ! | GATTTTCATGTCCTCCTTTT+TGG | - | chr6.4:46933930-46933949 | None:intergenic | 35.0% |
| ! | GTTGAACTCTTCTAAGAATC+TGG | - | chr6.4:46934478-46934497 | None:intergenic | 35.0% |
| ! | TTACCTTTACAGATGATGGT+CGG | + | chr6.4:46934085-46934104 | MS.gene062630:CDS | 35.0% |
| !! | ATTATGAGGAAGCTTTGGAA+GGG | + | chr6.4:46935288-46935307 | MS.gene062630:CDS | 35.0% |
| !! | CATTTGGTACTGACATAGAA+TGG | - | chr6.4:46935825-46935844 | None:intergenic | 35.0% |
| !! | CCTCATTGATTTATCTCCAT+CGG | - | chr6.4:46934367-46934386 | None:intergenic | 35.0% |
| !! | TTTTTCAACACAAGACTCTG+CGG | + | chr6.4:46935906-46935925 | MS.gene062630:CDS | 35.0% |
| !!! | TTATCGCCTTTTTGACTTCT+AGG | - | chr6.4:46934887-46934906 | None:intergenic | 35.0% |
| !!! | TTATGAATGTTTTGGCGATG+TGG | + | chr6.4:46934149-46934168 | MS.gene062630:intron | 35.0% |
| !!! | TTTTTGGGTTCATCATGACA+AGG | + | chr6.4:46934995-46935014 | MS.gene062630:CDS | 35.0% |
| AACTTCTTCACAATTCCCTC+CGG | + | chr6.4:46936217-46936236 | MS.gene062630:CDS | 40.0% | |
| AAGGAAGGATGATGTGGTAA+AGG | + | chr6.4:46933582-46933601 | MS.gene062630:CDS | 40.0% | |
| ACAAAGCCTATTGAATGCAG+CGG | - | chr6.4:46935243-46935262 | None:intergenic | 40.0% | |
| ACTACACTGATCATCAAGGA+AGG | + | chr6.4:46933977-46933996 | MS.gene062630:CDS | 40.0% | |
| AGAACGACATCGATATGTGA+AGG | + | chr6.4:46934660-46934679 | MS.gene062630:intron | 40.0% | |
| AGAAGATGAGAAGGAGAAAG+AGG | + | chr6.4:46935580-46935599 | MS.gene062630:intron | 40.0% | |
| ATGCTGAGTTGCTTCACTAT+AGG | - | chr6.4:46933362-46933381 | None:intergenic | 40.0% | |
| CAAAAATGGTCGTTTCACCA+TGG | - | chr6.4:46934245-46934264 | None:intergenic | 40.0% | |
| CAAGATAAATGTACGTCGTG+AGG | + | chr6.4:46935328-46935347 | MS.gene062630:CDS | 40.0% | |
| CAAGGAAGGGTTAGAATTGA+AGG | + | chr6.4:46933991-46934010 | MS.gene062630:CDS | 40.0% | |
| CACTCAGACTCAAATTGTTC+AGG | - | chr6.4:46934525-46934544 | None:intergenic | 40.0% | |
| CCAGATAATGCTAAACCCAA+AGG | + | chr6.4:46935398-46935417 | MS.gene062630:intron | 40.0% | |
| CCGATGGAGATAAATCAATG+AGG | + | chr6.4:46934364-46934383 | MS.gene062630:intron | 40.0% | |
| CTACACTGATCATCAAGGAA+GGG | + | chr6.4:46933978-46933997 | MS.gene062630:CDS | 40.0% | |
| CTCATTATGACCTTCTTTGG+AGG | - | chr6.4:46935186-46935205 | None:intergenic | 40.0% | |
| CTCCAAAGAAGGTCATAATG+AGG | + | chr6.4:46935184-46935203 | MS.gene062630:CDS | 40.0% | |
| CTGAACAATTTGAGTCTGAG+TGG | + | chr6.4:46934523-46934542 | MS.gene062630:intron | 40.0% | |
| GAAGTTAATCCACCCACATT+TGG | - | chr6.4:46936203-46936222 | None:intergenic | 40.0% | |
| GACGTTGTTCTCGTTGTAAA+AGG | + | chr6.4:46935471-46935490 | MS.gene062630:intron | 40.0% | |
| GATGTAGATGCCATGAACAA+AGG | - | chr6.4:46934428-46934447 | None:intergenic | 40.0% | |
| GATTTGGAGGACTTAGTTCA+TGG | - | chr6.4:46933795-46933814 | None:intergenic | 40.0% | |
| GGGTTTCATCATTCATGTCA+TGG | - | chr6.4:46935804-46935823 | None:intergenic | 40.0% | |
| TAACCGACCATCATCTGTAA+AGG | - | chr6.4:46934091-46934110 | None:intergenic | 40.0% | |
| TCATCATTTGCCTCCAAAGA+AGG | + | chr6.4:46935173-46935192 | MS.gene062630:CDS | 40.0% | |
| TGTCACATTTGTAGATGAGG+AGG | + | chr6.4:46935538-46935557 | MS.gene062630:intron | 40.0% | |
| TGTTCTCGTTGTAAAAGGCA+TGG | + | chr6.4:46935476-46935495 | MS.gene062630:intron | 40.0% | |
| TTCCATCTTGCAAATCCATG+TGG | - | chr6.4:46936122-46936141 | None:intergenic | 40.0% | |
| TTGTAGAATGGTATGCCACA+TGG | + | chr6.4:46936104-46936123 | MS.gene062630:intron | 40.0% | |
| TTTACAGGATTCAACCACCA+TGG | + | chr6.4:46934225-46934244 | MS.gene062630:intron | 40.0% | |
| ! | ATTTGGAGTCACAGAAGCAT+CGG | - | chr6.4:46935968-46935987 | None:intergenic | 40.0% |
| ! | CCTTTGGGTTTAGCATTATC+TGG | - | chr6.4:46935401-46935420 | None:intergenic | 40.0% |
| ! | GGTTTCTTAATGGGCCAAAA+AGG | + | chr6.4:46933913-46933932 | MS.gene062630:CDS | 40.0% |
| ! | GTTAGTGGTTTGCATTCTCA+AGG | + | chr6.4:46933868-46933887 | MS.gene062630:CDS | 40.0% |
| ! | TGCATTCAATAGGCTTTGTG+AGG | + | chr6.4:46935244-46935263 | MS.gene062630:CDS | 40.0% |
| ! | TTCTTAATGGGCCAAAAAGG+AGG | + | chr6.4:46933916-46933935 | MS.gene062630:CDS | 40.0% |
| !! | AGAAAGTGTCCAATACTTGC+TGG | + | chr6.4:46935509-46935528 | MS.gene062630:intron | 40.0% |
| !! | GATTATGAGGAAGCTTTGGA+AGG | + | chr6.4:46935287-46935306 | MS.gene062630:CDS | 40.0% |
| !! | TTCATTTTAGGGGCTCCTTT+GGG | - | chr6.4:46935416-46935435 | None:intergenic | 40.0% |
| !! | TTTCATTTTAGGGGCTCCTT+TGG | - | chr6.4:46935417-46935436 | None:intergenic | 40.0% |
| AAAGCGTATGCTCGTTTCCA+TGG | + | chr6.4:46933550-46933569 | MS.gene062630:CDS | 45.0% | |
| AAATGGTCGTTTCACCATGG+TGG | - | chr6.4:46934242-46934261 | None:intergenic | 45.0% | |
| AAGAGAGATGGTGACAAAGC+CGG | + | chr6.4:46935883-46935902 | MS.gene062630:CDS | 45.0% | |
| AAGCGTATGCTCGTTTCCAT+GGG | + | chr6.4:46933551-46933570 | MS.gene062630:CDS | 45.0% | |
| AATAGGCAAACCATGCGAAC+TGG | + | chr6.4:46933691-46933710 | MS.gene062630:CDS | 45.0% | |
| ACAGTTTACGAGCGTGTTGA+AGG | + | chr6.4:46936382-46936401 | MS.gene062630:intron | 45.0% | |
| ACGAGGGAAAAATTGTTGCG+CGG | + | chr6.4:46933608-46933627 | MS.gene062630:CDS | 45.0% | |
| AGAGGATGAGAAGGAATACG+AGG | + | chr6.4:46935598-46935617 | MS.gene062630:intron | 45.0% | |
| AGCTATGGAGTTTAGCACAG+AGG | + | chr6.4:46933507-46933526 | MS.gene062630:CDS | 45.0% | |
| ATTTGTAGATGAGGAGGAGG+AGG | + | chr6.4:46935544-46935563 | MS.gene062630:intron | 45.0% | |
| CAAAGGCGATGCCTTGAATT+CGG | - | chr6.4:46934411-46934430 | None:intergenic | 45.0% | |
| CAAGATGGAACCATGGTGTT+GGG | + | chr6.4:46936132-46936151 | MS.gene062630:CDS | 45.0% | |
| CACATTTGTAGATGAGGAGG+AGG | + | chr6.4:46935541-46935560 | MS.gene062630:intron | 45.0% | |
| CACTATTTCCAACCTCAGCA+TGG | - | chr6.4:46934938-46934957 | None:intergenic | 45.0% | |
| CACTTACCGCTGCATTCAAT+AGG | + | chr6.4:46935234-46935253 | MS.gene062630:CDS | 45.0% | |
| CCAAAAGCGATTGTTACCGA+TGG | + | chr6.4:46934348-46934367 | MS.gene062630:intron | 45.0% | |
| CCCAAAAAGCTGCATCTTTC+CGG | - | chr6.4:46934983-46935002 | None:intergenic | 45.0% | |
| GAAGGAGAAAGAGGATGAGA+AGG | + | chr6.4:46935589-46935608 | MS.gene062630:intron | 45.0% | |
| GATGTGGTAAAGGATCACGA+GGG | + | chr6.4:46933592-46933611 | MS.gene062630:CDS | 45.0% | |
| GGAAGGGTTAGAATTGAAGG+TGG | + | chr6.4:46933994-46934013 | MS.gene062630:CDS | 45.0% | |
| GGATTTGCAAGATGGAACCA+TGG | + | chr6.4:46936125-46936144 | MS.gene062630:CDS | 45.0% | |
| GTTTCCATGGGTTTGTCGTA+AGG | + | chr6.4:46933563-46933582 | MS.gene062630:CDS | 45.0% | |
| TACCAACATACCCAACACCA+TGG | - | chr6.4:46936145-46936164 | None:intergenic | 45.0% | |
| TACGGTGGGATTCCAAATGT+GGG | + | chr6.4:46936188-46936207 | MS.gene062630:CDS | 45.0% | |
| TGATGTGGTAAAGGATCACG+AGG | + | chr6.4:46933591-46933610 | MS.gene062630:CDS | 45.0% | |
| TGCCACATGGATTTGCAAGA+TGG | + | chr6.4:46936117-46936136 | MS.gene062630:CDS | 45.0% | |
| TGTCATGGCTTATAGACACC+TGG | - | chr6.4:46935789-46935808 | None:intergenic | 45.0% | |
| TGTCGTAAGGAAGGATGATG+TGG | + | chr6.4:46933576-46933595 | MS.gene062630:CDS | 45.0% | |
| ! | AACCATGGTGTTGGGTATGT+TGG | + | chr6.4:46936140-46936159 | MS.gene062630:CDS | 45.0% |
| ! | ACCGGAAAGATGCAGCTTTT+TGG | + | chr6.4:46934979-46934998 | MS.gene062630:CDS | 45.0% |
| ! | ATGCGAGACCATTTTGTGTG+TGG | + | chr6.4:46934633-46934652 | MS.gene062630:intron | 45.0% |
| ! | CCATCGGTAACAATCGCTTT+TGG | - | chr6.4:46934351-46934370 | None:intergenic | 45.0% |
| ! | CCGGAAAGATGCAGCTTTTT+GGG | + | chr6.4:46934980-46934999 | MS.gene062630:CDS | 45.0% |
| !! | TTTCCCGCTTTTCCTGTGTA+CGG | + | chr6.4:46936170-46936189 | MS.gene062630:CDS | 45.0% |
| AAATGGTCATGTTCCGCCGA+TGG | + | chr6.4:46935210-46935229 | MS.gene062630:CDS | 50.0% | |
| AATGGTCATGTTCCGCCGAT+GGG | + | chr6.4:46935211-46935230 | MS.gene062630:CDS | 50.0% | |
| AGATGAGGAGGAGGAGGAAA+AGG | + | chr6.4:46935550-46935569 | MS.gene062630:intron | 50.0% | |
| AGCAAGACATCCAGTTCGCA+TGG | - | chr6.4:46933704-46933723 | None:intergenic | 50.0% | |
| ATCTGTCACTCACCATGCTG+AGG | + | chr6.4:46934923-46934942 | MS.gene062630:CDS | 50.0% | |
| CCATGGGTTTGTCGTAAGGA+AGG | + | chr6.4:46933567-46933586 | MS.gene062630:CDS | 50.0% | |
| CCTTCCTTACGACAAACCCA+TGG | - | chr6.4:46933570-46933589 | None:intergenic | 50.0% | |
| CGTCGTGAGGGAAATGTCAA+TGG | + | chr6.4:46935341-46935360 | MS.gene062630:CDS | 50.0% | |
| GAAGCTTCACGCTCAAATCC+AGG | - | chr6.4:46934840-46934859 | None:intergenic | 50.0% | |
| GCAAGATGGAACCATGGTGT+TGG | + | chr6.4:46936131-46936150 | MS.gene062630:CDS | 50.0% | |
| GGATGAGAAGGAATACGAGG+AGG | + | chr6.4:46935601-46935620 | MS.gene062630:intron | 50.0% | |
| GGCAAGGAAGTTGTCAACAC+AGG | - | chr6.4:46934819-46934838 | None:intergenic | 50.0% | |
| GTACGGTGGGATTCCAAATG+TGG | + | chr6.4:46936187-46936206 | MS.gene062630:CDS | 50.0% | |
| TACGAGCGTGTTGAAGGACA+TGG | + | chr6.4:46936388-46936407 | MS.gene062630:CDS | 50.0% | |
| TTCACGCTCAAATCCAGGCA+AGG | - | chr6.4:46934835-46934854 | None:intergenic | 50.0% | |
| TTTGGGCAGATTCTGCAAGC+AGG | + | chr6.4:46934121-46934140 | MS.gene062630:intron | 50.0% | |
| ! | GTGTTGACAACTTCCTTGCC+TGG | + | chr6.4:46934819-46934838 | MS.gene062630:CDS | 50.0% |
| ! | TGTGATGGAAGGATGTCTGC+CGG | - | chr6.4:46936239-46936258 | None:intergenic | 50.0% |
| ! | TTTGGAATCCCACCGTACAC+AGG | - | chr6.4:46936185-46936204 | None:intergenic | 50.0% |
| !! | CAAGGCATCGCCTTTGTTCA+TGG | + | chr6.4:46934415-46934434 | MS.gene062630:intron | 50.0% |
| ATGCAGCGGTAAGTGCCCAT+CGG | - | chr6.4:46935229-46935248 | None:intergenic | 55.0% | |
| ATGGAAGGATGTCTGCCGGA+GGG | - | chr6.4:46936235-46936254 | None:intergenic | 55.0% | |
| CAAAGATGCAGAGGAGGAGG+TGG | + | chr6.4:46935625-46935644 | MS.gene062630:intron | 55.0% | |
| CCACCGTACACAGGAAAAGC+GGG | - | chr6.4:46936176-46936195 | None:intergenic | 55.0% | |
| CCCACCGTACACAGGAAAAG+CGG | - | chr6.4:46936177-46936196 | None:intergenic | 55.0% | |
| CGAGGAGGACAAAGATGCAG+AGG | + | chr6.4:46935616-46935635 | MS.gene062630:intron | 55.0% | |
| GGACAAAGATGCAGAGGAGG+AGG | + | chr6.4:46935622-46935641 | MS.gene062630:intron | 55.0% | |
| GGAGGACAAAGATGCAGAGG+AGG | + | chr6.4:46935619-46935638 | MS.gene062630:intron | 55.0% | |
| GGTGGGATTCCAAATGTGGG+TGG | + | chr6.4:46936191-46936210 | MS.gene062630:CDS | 55.0% | |
| GTCACTCACCATGCTGAGGT+TGG | + | chr6.4:46934927-46934946 | MS.gene062630:CDS | 55.0% | |
| !! | CCGCTTTTCCTGTGTACGGT+GGG | + | chr6.4:46936174-46936193 | MS.gene062630:CDS | 55.0% |
| AGATGCAGAGGAGGAGGTGG+AGG | + | chr6.4:46935628-46935647 | MS.gene062630:intron | 60.0% | |
| GATGGAAGGATGTCTGCCGG+AGG | - | chr6.4:46936236-46936255 | None:intergenic | 60.0% | |
| !! | CCCGCTTTTCCTGTGTACGG+TGG | + | chr6.4:46936173-46936192 | MS.gene062630:CDS | 60.0% |
| AGAGGAGGAGGTGGAGGAGG+AGG | + | chr6.4:46935634-46935653 | MS.gene062630:intron | 65.0% | |
| CAGCGGTAAGTGCCCATCGG+CGG | - | chr6.4:46935226-46935245 | None:intergenic | 65.0% | |
| TGCAGAGGAGGAGGTGGAGG+AGG | + | chr6.4:46935631-46935650 | MS.gene062630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 46933352 | 46936448 | 46933352 | ID=MS.gene062630 |
| chr6.4 | mRNA | 46933352 | 46936448 | 46933352 | ID=MS.gene062630.t1;Parent=MS.gene062630 |
| chr6.4 | exon | 46933352 | 46934106 | 46933352 | ID=MS.gene062630.t1.exon1;Parent=MS.gene062630.t1 |
| chr6.4 | CDS | 46933352 | 46934106 | 46933352 | ID=cds.MS.gene062630.t1;Parent=MS.gene062630.t1 |
| chr6.4 | exon | 46934755 | 46935373 | 46934755 | ID=MS.gene062630.t1.exon2;Parent=MS.gene062630.t1 |
| chr6.4 | CDS | 46934755 | 46935373 | 46934755 | ID=cds.MS.gene062630.t1;Parent=MS.gene062630.t1 |
| chr6.4 | exon | 46935790 | 46936008 | 46935790 | ID=MS.gene062630.t1.exon3;Parent=MS.gene062630.t1 |
| chr6.4 | CDS | 46935790 | 46936008 | 46935790 | ID=cds.MS.gene062630.t1;Parent=MS.gene062630.t1 |
| chr6.4 | exon | 46936110 | 46936295 | 46936110 | ID=MS.gene062630.t1.exon4;Parent=MS.gene062630.t1 |
| chr6.4 | CDS | 46936110 | 46936295 | 46936110 | ID=cds.MS.gene062630.t1;Parent=MS.gene062630.t1 |
| chr6.4 | exon | 46936386 | 46936448 | 46936386 | ID=MS.gene062630.t1.exon5;Parent=MS.gene062630.t1 |
| chr6.4 | CDS | 46936386 | 46936448 | 46936386 | ID=cds.MS.gene062630.t1;Parent=MS.gene062630.t1 |
| Gene Sequence |
| Protein sequence |
