Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062773.t1 | XP_024626902.1 | 60.2 | 332 | 78 | 5 | 1 | 323 | 1 | 287 | 2.50E-97 | 365.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062773.t1 | Q9LVA1 | 31.2 | 173 | 110 | 6 | 11 | 180 | 13 | 179 | 1.8e-11 | 71.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062773.t1 | G7I4G0 | 80.3 | 233 | 26 | 4 | 98 | 330 | 5 | 217 | 3.6e-93 | 351.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene062773.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062773.t1 | MTR_1g019820 | 80.258 | 233 | 26 | 4 | 98 | 330 | 5 | 217 | 8.21e-123 | 352 |
| MS.gene062773.t1 | MTR_1g045470 | 51.613 | 341 | 117 | 10 | 1 | 323 | 1 | 311 | 9.34e-100 | 297 |
| MS.gene062773.t1 | MTR_7g116460 | 70.476 | 210 | 47 | 2 | 1 | 203 | 1 | 202 | 8.61e-98 | 288 |
| MS.gene062773.t1 | MTR_1g053575 | 45.634 | 355 | 115 | 9 | 1 | 323 | 1 | 309 | 1.07e-90 | 274 |
| MS.gene062773.t1 | MTR_7g100990 | 34.395 | 157 | 88 | 5 | 11 | 159 | 17 | 166 | 5.82e-18 | 83.6 |
| MS.gene062773.t1 | MTR_7g005280 | 32.716 | 162 | 97 | 4 | 11 | 170 | 21 | 172 | 7.34e-18 | 82.0 |
| MS.gene062773.t1 | MTR_2g093810 | 29.185 | 233 | 123 | 9 | 11 | 209 | 20 | 244 | 1.47e-13 | 70.9 |
| MS.gene062773.t1 | MTR_4g089135 | 34.884 | 129 | 75 | 4 | 11 | 137 | 21 | 142 | 1.92e-13 | 70.5 |
| MS.gene062773.t1 | MTR_2g080010 | 30.247 | 162 | 91 | 5 | 11 | 157 | 21 | 175 | 1.16e-12 | 68.6 |
| MS.gene062773.t1 | MTR_2157s0010 | 29.747 | 158 | 90 | 6 | 11 | 154 | 14 | 164 | 2.91e-12 | 66.2 |
| MS.gene062773.t1 | MTR_4g081870 | 31.613 | 155 | 89 | 6 | 11 | 157 | 15 | 160 | 5.25e-12 | 65.5 |
| MS.gene062773.t1 | MTR_3g096140 | 31.875 | 160 | 96 | 8 | 11 | 165 | 13 | 164 | 5.89e-12 | 65.5 |
| MS.gene062773.t1 | MTR_3g096140 | 31.875 | 160 | 96 | 8 | 11 | 165 | 13 | 164 | 1.02e-11 | 65.5 |
| MS.gene062773.t1 | MTR_3g109340 | 27.083 | 192 | 126 | 6 | 11 | 195 | 28 | 212 | 1.22e-11 | 65.5 |
| MS.gene062773.t1 | MTR_8g076110 | 30.247 | 162 | 102 | 7 | 11 | 168 | 12 | 166 | 3.94e-11 | 63.5 |
| MS.gene062773.t1 | MTR_3g109340 | 27.461 | 193 | 125 | 7 | 11 | 195 | 28 | 213 | 4.91e-11 | 63.5 |
| MS.gene062773.t1 | MTR_0036s0150 | 30.675 | 163 | 100 | 6 | 11 | 168 | 11 | 165 | 7.83e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene062773.t1 | AT5G13180 | 34.694 | 147 | 83 | 5 | 11 | 154 | 20 | 156 | 7.87e-15 | 73.6 |
| MS.gene062773.t1 | AT3G15510 | 29.255 | 188 | 104 | 7 | 11 | 182 | 23 | 197 | 1.96e-14 | 73.9 |
| MS.gene062773.t1 | AT2G33480 | 33.562 | 146 | 83 | 5 | 11 | 154 | 21 | 154 | 4.17e-13 | 68.9 |
| MS.gene062773.t1 | AT1G77450 | 33.987 | 153 | 80 | 8 | 11 | 154 | 16 | 156 | 5.72e-13 | 68.2 |
| MS.gene062773.t1 | AT3G61910 | 26.794 | 209 | 119 | 10 | 11 | 192 | 17 | 218 | 2.10e-12 | 67.4 |
| MS.gene062773.t1 | AT3G10480 | 34.591 | 159 | 81 | 9 | 11 | 158 | 33 | 179 | 2.51e-12 | 67.8 |
| MS.gene062773.t1 | AT3G10480 | 34.416 | 154 | 87 | 8 | 11 | 158 | 33 | 178 | 5.19e-12 | 67.0 |
| MS.gene062773.t1 | AT3G04070 | 32.298 | 161 | 88 | 8 | 11 | 157 | 16 | 169 | 1.30e-11 | 65.1 |
| MS.gene062773.t1 | AT3G15170 | 32.000 | 150 | 89 | 5 | 11 | 154 | 26 | 168 | 1.35e-11 | 65.1 |
| MS.gene062773.t1 | AT1G32770 | 32.716 | 162 | 88 | 7 | 11 | 157 | 22 | 177 | 2.68e-11 | 64.3 |
Find 62 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTTGATTTCTTGAATT+TGG | 0.031453 | 1.4:+3449785 | None:intergenic |
| CCACCATTTGATTGACATTT+TGG | 0.104866 | 1.4:+3451899 | None:intergenic |
| GTTCTTGAATATGATTTATT+TGG | 0.182094 | 1.4:-3454511 | MS.gene062773:CDS |
| CAAAGAATCCTTGGGAGATT+TGG | 0.196255 | 1.4:-3454483 | MS.gene062773:CDS |
| AGTGGGAGATTTCTTCTTTA+AGG | 0.222616 | 1.4:+3454405 | None:intergenic |
| CCAGAAAAGACCGTGGTTCT+TGG | 0.260366 | 1.4:-3451845 | MS.gene062773:CDS |
| TAGCAATGTTTGCCAGGATT+TGG | 0.273310 | 1.4:+3449572 | None:intergenic |
| AAAGAATCCTTGGGAGATTT+GGG | 0.318962 | 1.4:-3454482 | MS.gene062773:CDS |
| TGGAAATATCAAGATTGATT+TGG | 0.320688 | 1.4:-3449759 | MS.gene062773:CDS |
| CAAGTTGATTTCTTGAATTT+GGG | 0.346015 | 1.4:+3449786 | None:intergenic |
| TTGATTCGTACAATTGGAAT+TGG | 0.348604 | 1.4:-3454373 | MS.gene062773:CDS |
| TTCAAGAACATTGATATAGT+TGG | 0.354618 | 1.4:+3454525 | None:intergenic |
| TCATCAAGTGAGAATTTGAT+TGG | 0.398760 | 1.4:+3453880 | None:intergenic |
| AAACGCTTGATTCGTACAAT+TGG | 0.407900 | 1.4:-3454379 | MS.gene062773:CDS |
| TTGGTATCACAAAGAATCCT+TGG | 0.412757 | 1.4:-3454492 | MS.gene062773:CDS |
| ATCTTTGATTAACAATGCTT+CGG | 0.415664 | 1.4:-3454206 | MS.gene062773:intron |
| GAACTCATAGAGGCGAATAA+AGG | 0.424663 | 1.4:-3449629 | MS.gene062773:CDS |
| TCAAGAACATTGATATAGTT+GGG | 0.434618 | 1.4:+3454526 | None:intergenic |
| AGTATGGTAACTTACAGATA+TGG | 0.443956 | 1.4:+3453800 | None:intergenic |
| AATCAAATGGTGGCCACAAA+AGG | 0.456926 | 1.4:-3451889 | MS.gene062773:CDS |
| GAACCAAAATGTCAATCAAA+TGG | 0.458333 | 1.4:-3451902 | MS.gene062773:CDS |
| TCAAGAAATCAACTTGATAG+TGG | 0.460070 | 1.4:-3449779 | MS.gene062773:CDS |
| TAAACATAGCAATGTTTGCC+AGG | 0.462499 | 1.4:+3449566 | None:intergenic |
| CAAGGAAAGACAGTTGTTCC+CGG | 0.469375 | 1.4:-3453837 | MS.gene062773:CDS |
| ACAAATAATACTTACAATGT+TGG | 0.484031 | 1.4:+3451808 | None:intergenic |
| TCTGCATAGAACATAATTGC+TGG | 0.484592 | 1.4:+3453956 | None:intergenic |
| ATTGAAATGATTCCAAATCC+TGG | 0.485538 | 1.4:-3449584 | MS.gene062773:CDS |
| ATGAAGATGGTGATATCTCT+TGG | 0.494027 | 1.4:-3449670 | MS.gene062773:CDS |
| ACGAATCAAGCGTTTACTAG+TGG | 0.496910 | 1.4:+3454387 | None:intergenic |
| GGAGAAAGGTGGGAAATACT+TGG | 0.497376 | 1.4:-3451868 | MS.gene062773:CDS |
| TGGTATCACAAAGAATCCTT+GGG | 0.502644 | 1.4:-3454491 | MS.gene062773:CDS |
| TGAATAGCATTGGACAAGAT+AGG | 0.516694 | 1.4:-3453860 | MS.gene062773:CDS |
| AATTGTAAACTTTATTGTAG+AGG | 0.517878 | 1.4:+3454557 | None:intergenic |
| AAGAGTAACACTTCTGAAGA+TGG | 0.525582 | 1.4:-3454262 | MS.gene062773:CDS |
| AGTATAGTTGACAAAGAGAC+TGG | 0.529604 | 1.4:-3454322 | MS.gene062773:CDS |
| ATTATAAACAAAGATGAAGA+TGG | 0.538976 | 1.4:-3449683 | MS.gene062773:CDS |
| TCTCACTTGATGAATAGCAT+TGG | 0.540753 | 1.4:-3453870 | MS.gene062773:CDS |
| AACTCTTCCCAAATCTCCCA+AGG | 0.556547 | 1.4:+3454475 | None:intergenic |
| CGAAGAAGTTCACCATCTGT+AGG | 0.564532 | 1.4:+3454586 | None:intergenic |
| CGAATCAAGCGTTTACTAGT+GGG | 0.567217 | 1.4:+3454388 | None:intergenic |
| AGGAAGGTTAATCGAAGAGG+AGG | 0.569881 | 1.4:-3449609 | MS.gene062773:CDS |
| TTTAGGACATCATTGTTTCG+AGG | 0.573378 | 1.4:-3451940 | MS.gene062773:intron |
| AAAGAGACTGGCCAAACCCT+AGG | 0.583006 | 1.4:-3454310 | MS.gene062773:CDS |
| ACACTTCTGAAGATGGTGGA+TGG | 0.587791 | 1.4:-3454255 | MS.gene062773:CDS |
| TGGTGGCCACAAAAGGAGAA+AGG | 0.590211 | 1.4:-3451882 | MS.gene062773:CDS |
| ACATTGATATAGTTGGGCAC+TGG | 0.596165 | 1.4:+3454532 | None:intergenic |
| GGCCACAAAAGGAGAAAGGT+GGG | 0.607433 | 1.4:-3451878 | MS.gene062773:CDS |
| GACAGTTGTTCCCGGACCTG+CGG | 0.611545 | 1.4:-3453829 | MS.gene062773:CDS |
| TGTTAATCAAAGATATGTCA+AGG | 0.619881 | 1.4:+3454215 | None:intergenic |
| TCATAGAGGCGAATAAAGGA+AGG | 0.621204 | 1.4:-3449625 | MS.gene062773:CDS |
| GTACAATTGGAATTGGTACG+TGG | 0.632001 | 1.4:-3454366 | MS.gene062773:CDS |
| AGTAACACTTCTGAAGATGG+TGG | 0.632536 | 1.4:-3454259 | MS.gene062773:CDS |
| AGCATTGGACAAGATAGGCA+AGG | 0.636618 | 1.4:-3453855 | MS.gene062773:CDS |
| CCAAAATGTCAATCAAATGG+TGG | 0.636763 | 1.4:-3451899 | MS.gene062773:CDS |
| TGGCCACAAAAGGAGAAAGG+TGG | 0.638854 | 1.4:-3451879 | MS.gene062773:CDS |
| TAAAGGAAGGTTAATCGAAG+AGG | 0.641045 | 1.4:-3449612 | MS.gene062773:CDS |
| AAGTGTTACTCTTCTCAAAG+CGG | 0.648652 | 1.4:+3454272 | None:intergenic |
| TACAATTGGAATTGGTACGT+GGG | 0.659468 | 1.4:-3454365 | MS.gene062773:CDS |
| ACGTGGGAAGCTGAAGACAC+CGG | 0.664319 | 1.4:-3454349 | MS.gene062773:CDS |
| AGCTTTAAGTCCAAGAACCA+CGG | 0.675233 | 1.4:+3451835 | None:intergenic |
| TAAAAGTGCCAATACGACAG+AGG | 0.688062 | 1.4:-3449735 | MS.gene062773:CDS |
| TACTTGGCCAGAAAAGACCG+TGG | 0.736153 | 1.4:-3451852 | MS.gene062773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTAATAAAATTTAAAT+AGG | - | chr1.4:3454111-3454130 | MS.gene062773:intron | 0.0% |
| !! | AAATTTAATAAAATTTAAAT+AGG | + | chr1.4:3454130-3454111 | None:intergenic | 0.0% |
| !! | AATTTAATAAAATTTAAATA+GGG | - | chr1.4:3454112-3454131 | MS.gene062773:intron | 0.0% |
| !! | AATTTAATAAAATTTAAATA+GGG | + | chr1.4:3454131-3454112 | None:intergenic | 0.0% |
| !! | ACTAATTAATACTATTAATT+TGG | + | chr1.4:3451683-3451702 | None:intergenic | 10.0% |
| !! | ATATAATCAAATTCAAATTT+GGG | + | chr1.4:3451911-3451930 | None:intergenic | 10.0% |
| !! | TATGTAAAAAAAAAAAGATT+TGG | + | chr1.4:3452108-3452127 | None:intergenic | 10.0% |
| !!! | AAAAAAAATAGAAATTTGTT+CGG | + | chr1.4:3451513-3451532 | None:intergenic | 10.0% |
| !!! | AAATTGTTTAAAAGTATAAT+TGG | - | chr1.4:3451076-3451095 | MS.gene062773:intron | 10.0% |
| !!! | AACAATATTTTTTATGAAAT+TGG | - | chr1.4:3450609-3450628 | MS.gene062773:intron | 10.0% |
| !!! | AATTGTTTAAAAGTATAATT+GGG | - | chr1.4:3451077-3451096 | MS.gene062773:intron | 10.0% |
| !!! | GATATAGAATTATATATTTT+TGG | - | chr1.4:3451360-3451379 | MS.gene062773:intron | 10.0% |
| !! | AAACAAATTTAGATTTAGTA+GGG | - | chr1.4:3453846-3453865 | MS.gene062773:CDS | 15.0% |
| !! | AAACAAATTTAGATTTAGTA+GGG | + | chr1.4:3453865-3453846 | None:intergenic | 15.0% |
| !! | AAATAAAAGTAACAAAAATC+TGG | + | chr1.4:3453736-3453717 | None:intergenic | 15.0% |
| !! | AATTTGAATTTGATTATATC+CGG | - | chr1.4:3451912-3451931 | MS.gene062773:CDS | 15.0% |
| !! | ATTATCATTACATATAGAAA+AGG | + | chr1.4:3452188-3452207 | None:intergenic | 15.0% |
| !! | GATATAATCAAATTCAAATT+TGG | + | chr1.4:3451912-3451931 | None:intergenic | 15.0% |
| !! | GTTAAAATAGATCAAATAAA+TGG | + | chr1.4:3454205-3454224 | None:intergenic | 15.0% |
| !! | TAAACAAATTTAGATTTAGT+AGG | - | chr1.4:3453845-3453864 | MS.gene062773:CDS | 15.0% |
| !! | TAAACAAATTTAGATTTAGT+AGG | + | chr1.4:3453864-3453845 | None:intergenic | 15.0% |
| !! | TGGGTAAAAAAATTAAAATA+CGG | + | chr1.4:3451892-3451911 | None:intergenic | 15.0% |
| !! | TTGAAAAATTTAAGAGTTTA+AGG | - | chr1.4:3453167-3453186 | MS.gene062773:intron | 15.0% |
| !!! | AAAAAAAAAAGATTTTGATG+TGG | + | chr1.4:3450767-3450786 | None:intergenic | 15.0% |
| !!! | ATTCTTTTTTCTGTATTTTT+TGG | + | chr1.4:3450281-3450300 | None:intergenic | 15.0% |
| !!! | TAACAAAAAACAAATTTTGT+TGG | - | chr1.4:3451639-3451658 | MS.gene062773:intron | 15.0% |
| !! | AAAATTGCTAGCAATAATAA+TGG | + | chr1.4:3451602-3451621 | None:intergenic | 20.0% |
| !! | AACCAAAAAAATAATTCATG+AGG | + | chr1.4:3450072-3450091 | None:intergenic | 20.0% |
| !! | AAGTAAGGATTAAACTTAAA+AGG | - | chr1.4:3453922-3453941 | MS.gene062773:CDS | 20.0% |
| !! | AATCAAGCTAACATAAAAAA+AGG | + | chr1.4:3450561-3450580 | None:intergenic | 20.0% |
| !! | AATGACCAAAAATATTTGTA+GGG | + | chr1.4:3453280-3453299 | None:intergenic | 20.0% |
| !! | AATTGTAAACTTTATTGTAG+AGG | + | chr1.4:3449633-3449652 | None:intergenic | 20.0% |
| !! | ACAAATAATACTTACAATGT+TGG | + | chr1.4:3452382-3452401 | None:intergenic | 20.0% |
| !! | AGCACTATTAAAATTAAGTA+AGG | - | chr1.4:3453907-3453926 | MS.gene062773:CDS | 20.0% |
| !! | AGCACTATTAAAATTAAGTA+AGG | + | chr1.4:3453926-3453907 | None:intergenic | 20.0% |
| !! | ATACTAAGTTTATCCTAATT+AGG | - | chr1.4:3450112-3450131 | MS.gene062773:intron | 20.0% |
| !! | ATCAAGCTAACATAAAAAAA+GGG | + | chr1.4:3450560-3450579 | None:intergenic | 20.0% |
| !! | ATTATAAACAAAGATGAAGA+TGG | - | chr1.4:3454504-3454523 | MS.gene062773:CDS | 20.0% |
| !! | ATTGTTTGAATAATGTGTTT+GGG | + | chr1.4:3454279-3454298 | None:intergenic | 20.0% |
| !! | CTAAATCTATATACTTGAAA+AGG | - | chr1.4:3451832-3451851 | MS.gene062773:CDS | 20.0% |
| !! | GTTCTTGAATATGATTTATT+TGG | - | chr1.4:3449676-3449695 | MS.gene062773:CDS | 20.0% |
| !! | TAAAAGTTACAATTATTCCT+TGG | - | chr1.4:3450164-3450183 | MS.gene062773:intron | 20.0% |
| !! | TAAACTTAGTATTTAAACGT+TGG | + | chr1.4:3450104-3450123 | None:intergenic | 20.0% |
| !! | TACTAAGTTTATCCTAATTA+GGG | - | chr1.4:3450113-3450132 | MS.gene062773:intron | 20.0% |
| !! | TATATATATTAGCGAAAAGT+CGG | - | chr1.4:3450814-3450833 | MS.gene062773:intron | 20.0% |
| !! | TATTCACCTTAAAAAGTAAA+GGG | - | chr1.4:3452598-3452617 | MS.gene062773:intron | 20.0% |
| !! | TCAACTAAAAAGAGAAAATT+TGG | - | chr1.4:3452006-3452025 | MS.gene062773:intron | 20.0% |
| !! | TTATTCACCTTAAAAAGTAA+AGG | - | chr1.4:3452597-3452616 | MS.gene062773:intron | 20.0% |
| !!! | AATTAACCCTTTACTTTTTA+AGG | + | chr1.4:3452607-3452626 | None:intergenic | 20.0% |
| !!! | ATGTGTTATTTATTTGTTGA+AGG | - | chr1.4:3452416-3452435 | MS.gene062773:intron | 20.0% |
| !!! | GAAATTGGTTTTGATTAAAA+AGG | - | chr1.4:3450624-3450643 | MS.gene062773:intron | 20.0% |
| !!! | GAGTGCATAATTTTTTTATA+TGG | - | chr1.4:3453878-3453897 | MS.gene062773:CDS | 20.0% |
| !!! | GAGTGCATAATTTTTTTATA+TGG | + | chr1.4:3453897-3453878 | None:intergenic | 20.0% |
| !!! | TAAATGACATCATATGTTTT+TGG | - | chr1.4:3452788-3452807 | MS.gene062773:intron | 20.0% |
| !!! | TAAATGACATCATATGTTTT+TGG | + | chr1.4:3452807-3452788 | None:intergenic | 20.0% |
| !!! | TAGTTTGTTACTCTTTTTAA+GGG | - | chr1.4:3451132-3451151 | MS.gene062773:intron | 20.0% |
| !!! | TCTTTGTGATTTTTTTTTTG+TGG | - | chr1.4:3451473-3451492 | MS.gene062773:intron | 20.0% |
| !!! | TTTTCTGTATTTTTTGGATT+GGG | + | chr1.4:3450275-3450294 | None:intergenic | 20.0% |
| !!! | TTTTGGGTTAATTATGTTTA+AGG | + | chr1.4:3454170-3454189 | None:intergenic | 20.0% |
| !!! | TTTTTCTGTATTTTTTGGAT+TGG | + | chr1.4:3450276-3450295 | None:intergenic | 20.0% |
| ! | AAAAAATAATTCATGAGGTG+AGG | + | chr1.4:3450067-3450086 | None:intergenic | 25.0% |
| ! | AAAAATTTCAAACCTACAGA+TGG | - | chr1.4:3449589-3449608 | MS.gene062773:CDS | 25.0% |
| ! | AAGAGAAAAAACAAATACGA+CGG | + | chr1.4:3450537-3450556 | None:intergenic | 25.0% |
| ! | AAGTAAGGACTAAACTTAAA+AGG | + | chr1.4:3452831-3452850 | None:intergenic | 25.0% |
| ! | AATATATCAACAAAATCCCT+GGG | + | chr1.4:3452444-3452463 | None:intergenic | 25.0% |
| ! | AATTAATGTCTTAGAGAGTT+TGG | - | chr1.4:3453523-3453542 | MS.gene062773:intron | 25.0% |
| ! | ATCTTTGATTAACAATGCTT+CGG | - | chr1.4:3449981-3450000 | MS.gene062773:intron | 25.0% |
| ! | ATTAGTAGCCAATTATAGTA+TGG | + | chr1.4:3450406-3450425 | None:intergenic | 25.0% |
| ! | CATTGTTTGAATAATGTGTT+TGG | + | chr1.4:3454280-3454299 | None:intergenic | 25.0% |
| ! | GAAAAATCTAACAAAGAAGA+TGG | - | chr1.4:3454474-3454493 | MS.gene062773:CDS | 25.0% |
| ! | GAATGACCAAAAATATTTGT+AGG | + | chr1.4:3453281-3453300 | None:intergenic | 25.0% |
| ! | GTAAGTTACCATACTATAAT+TGG | - | chr1.4:3450395-3450414 | MS.gene062773:intron | 25.0% |
| ! | GTCATTGAAATAGATAATCA+TGG | + | chr1.4:3450979-3450998 | None:intergenic | 25.0% |
| ! | TAAAGGGTTAATTCTGTTTA+AGG | - | chr1.4:3452614-3452633 | MS.gene062773:intron | 25.0% |
| ! | TAACATTTGAACAAGATTAC+CGG | + | chr1.4:3451934-3451953 | None:intergenic | 25.0% |
| ! | TAATATATCAACAAAATCCC+TGG | + | chr1.4:3452445-3452464 | None:intergenic | 25.0% |
| ! | TCAAGAACATTGATATAGTT+GGG | + | chr1.4:3449664-3449683 | None:intergenic | 25.0% |
| ! | TGGAAATATCAAGATTGATT+TGG | - | chr1.4:3454428-3454447 | MS.gene062773:CDS | 25.0% |
| ! | TGTTAATCAAAGATATGTCA+AGG | + | chr1.4:3449975-3449994 | None:intergenic | 25.0% |
| ! | TTCAAGAACATTGATATAGT+TGG | + | chr1.4:3449665-3449684 | None:intergenic | 25.0% |
| ! | TTCACAAATGATCATATGTA+AGG | - | chr1.4:3452475-3452494 | MS.gene062773:intron | 25.0% |
| !! | CTTAAACAAGCTTGTTTAAA+AGG | + | chr1.4:3450723-3450742 | None:intergenic | 25.0% |
| !! | CTTTTGCATTCTTGATTTTT+AGG | - | chr1.4:3452230-3452249 | MS.gene062773:intron | 25.0% |
| !! | TAAAAGGTCCCAATTTTATA+GGG | + | chr1.4:3452815-3452834 | None:intergenic | 25.0% |
| !! | TAGATTATTGTTGTTGTTGT+TGG | - | chr1.4:3451436-3451455 | MS.gene062773:intron | 25.0% |
| !! | TTAAAAGGTCCCAATTTTAT+AGG | + | chr1.4:3452816-3452835 | None:intergenic | 25.0% |
| !! | TTGAAAGTTGAGGATAATTT+TGG | - | chr1.4:3451258-3451277 | MS.gene062773:intron | 25.0% |
| !! | TTGTAGGGTGAAATATTTTA+TGG | + | chr1.4:3453265-3453284 | None:intergenic | 25.0% |
| !! | TTTCACCCTACAAATATTTT+TGG | - | chr1.4:3453272-3453291 | MS.gene062773:intron | 25.0% |
| !! | TTTGGAACAAGAATGAAATT+TGG | - | chr1.4:3452024-3452043 | MS.gene062773:intron | 25.0% |
| !!! | AAAGTGATTTTTTTTGTGTG+TGG | - | chr1.4:3450456-3450475 | MS.gene062773:intron | 25.0% |
| !!! | AAGTGATTTTTTTTGTGTGT+GGG | - | chr1.4:3450457-3450476 | MS.gene062773:intron | 25.0% |
| !!! | AATGGACTATGATTTACTTT+TGG | + | chr1.4:3454187-3454206 | None:intergenic | 25.0% |
| !!! | AATTTTAGTAAACGAACCTT+TGG | + | chr1.4:3453639-3453658 | None:intergenic | 25.0% |
| !!! | ATGGACTATGATTTACTTTT+GGG | + | chr1.4:3454186-3454205 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTTCTTGAATTT+GGG | + | chr1.4:3454404-3454423 | None:intergenic | 25.0% |
| !!! | CACCTCATGAATTATTTTTT+TGG | - | chr1.4:3450067-3450086 | MS.gene062773:intron | 25.0% |
| !!! | CTAGTTTGTTACTCTTTTTA+AGG | - | chr1.4:3451131-3451150 | MS.gene062773:intron | 25.0% |
| !!! | TACTTTTTAAGGTGAATAAG+TGG | + | chr1.4:3452596-3452615 | None:intergenic | 25.0% |
| !!! | TCAAGTTGATTTCTTGAATT+TGG | + | chr1.4:3454405-3454424 | None:intergenic | 25.0% |
| !!! | TGGTTTTGATTAAAAAGGAT+AGG | - | chr1.4:3450629-3450648 | MS.gene062773:intron | 25.0% |
| !!! | TTACTCTTTTTAAGGGATAA+TGG | - | chr1.4:3451139-3451158 | MS.gene062773:intron | 25.0% |
| !!! | TTTGTCAACTATACTTTTTC+CGG | + | chr1.4:3449860-3449879 | None:intergenic | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | - | chr1.4:3452804-3452823 | MS.gene062773:intron | 25.0% |
| AGAGAAAAAACAAATACGAC+GGG | + | chr1.4:3450536-3450555 | None:intergenic | 30.0% | |
| AGTATGGTAACTTACAGATA+TGG | + | chr1.4:3450390-3450409 | None:intergenic | 30.0% | |
| ATGGATCTGGAAGAATAAAA+AGG | + | chr1.4:3453246-3453265 | None:intergenic | 30.0% | |
| ATTGAAATGATTCCAAATCC+TGG | - | chr1.4:3454603-3454622 | MS.gene062773:CDS | 30.0% | |
| ATTGTTATATGAAGATGTCG+GGG | - | chr1.4:3452554-3452573 | MS.gene062773:intron | 30.0% | |
| ATTTAAATAGGGACCAATGT+TGG | - | chr1.4:3454123-3454142 | MS.gene062773:intron | 30.0% | |
| CAATAAAAAGAGCGGAAAAA+TGG | + | chr1.4:3450852-3450871 | None:intergenic | 30.0% | |
| CATTGTTATATGAAGATGTC+GGG | - | chr1.4:3452553-3452572 | MS.gene062773:intron | 30.0% | |
| CCAGAAAATAAACCCTAATT+AGG | + | chr1.4:3450128-3450147 | None:intergenic | 30.0% | |
| GAACCAAAATGTCAATCAAA+TGG | - | chr1.4:3452285-3452304 | MS.gene062773:intron | 30.0% | |
| GCATTGTTATATGAAGATGT+CGG | - | chr1.4:3452552-3452571 | MS.gene062773:intron | 30.0% | |
| GCTATTTGTATTGAAAGTTG+AGG | - | chr1.4:3451248-3451267 | MS.gene062773:intron | 30.0% | |
| GGAAGAATAAAAAGGAATGA+AGG | + | chr1.4:3453238-3453257 | None:intergenic | 30.0% | |
| TAAATATGTGCACAATACCA+AGG | + | chr1.4:3450184-3450203 | None:intergenic | 30.0% | |
| TACAAACGGAAGAAAATGTT+GGG | - | chr1.4:3454082-3454101 | MS.gene062773:intron | 30.0% | |
| TACAAACGGAAGAAAATGTT+GGG | + | chr1.4:3454101-3454082 | None:intergenic | 30.0% | |
| TCAAGAAATCAACTTGATAG+TGG | - | chr1.4:3454408-3454427 | MS.gene062773:CDS | 30.0% | |
| TCATCAAGTGAGAATTTGAT+TGG | + | chr1.4:3450310-3450329 | None:intergenic | 30.0% | |
| TTACAAACGGAAGAAAATGT+TGG | - | chr1.4:3454081-3454100 | MS.gene062773:intron | 30.0% | |
| TTACAAACGGAAGAAAATGT+TGG | + | chr1.4:3454100-3454081 | None:intergenic | 30.0% | |
| TTTATCATGTTCAACTTTGC+TGG | + | chr1.4:3452079-3452098 | None:intergenic | 30.0% | |
| ! | AATGCAAGAGCACAATAATA+AGG | + | chr1.4:3454358-3454377 | None:intergenic | 30.0% |
| ! | AATTTGGGTCAATATTTTCC+TGG | + | chr1.4:3454389-3454408 | None:intergenic | 30.0% |
| ! | ATATGATGTCATTTACCACA+TGG | - | chr1.4:3453970-3453989 | MS.gene062773:intron | 30.0% |
| ! | ATATGATGTCATTTACCACA+TGG | + | chr1.4:3453989-3453970 | None:intergenic | 30.0% |
| ! | ATGGGCTTTGACAAAAATTA+TGG | + | chr1.4:3453209-3453228 | None:intergenic | 30.0% |
| ! | ATTATTGTTGTTGTTGTTGG+TGG | - | chr1.4:3451439-3451458 | MS.gene062773:intron | 30.0% |
| ! | CAAGTTTAGAACATTACCAA+AGG | - | chr1.4:3453620-3453639 | MS.gene062773:intron | 30.0% |
| ! | GGTGAAATATTTTATGGATC+TGG | + | chr1.4:3453259-3453278 | None:intergenic | 30.0% |
| ! | TAAAAGGTCCCAATTTTACA+GGG | - | chr1.4:3453938-3453957 | MS.gene062773:CDS | 30.0% |
| ! | TGGGCTTTGACAAAAATTAT+GGG | + | chr1.4:3453208-3453227 | None:intergenic | 30.0% |
| ! | TTAAAAGGTCCCAATTTTAC+AGG | - | chr1.4:3453937-3453956 | MS.gene062773:CDS | 30.0% |
| ! | TTGATTCGTACAATTGGAAT+TGG | - | chr1.4:3449814-3449833 | MS.gene062773:intron | 30.0% |
| ! | TTTTCTTCCGTTTGTAAGTT+TGG | - | chr1.4:3452675-3452694 | MS.gene062773:intron | 30.0% |
| ! | TTTTCTTCCGTTTGTAAGTT+TGG | + | chr1.4:3452694-3452675 | None:intergenic | 30.0% |
| !! | CCTAATTAGGGTTTATTTTC+TGG | - | chr1.4:3450125-3450144 | MS.gene062773:intron | 30.0% |
| !! | TTTTTGGTCCCTGTAAAATT+GGG | + | chr1.4:3453949-3453968 | None:intergenic | 30.0% |
| !!! | GAAACGTTTTTTTAGTCCTA+GGG | + | chr1.4:3449896-3449915 | None:intergenic | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | - | chr1.4:3452803-3452822 | MS.gene062773:intron | 30.0% |
| AAAGAATCCTTGGGAGATTT+GGG | - | chr1.4:3449705-3449724 | MS.gene062773:CDS | 35.0% | |
| AATAATTCATGAGGTGAGGT+TGG | + | chr1.4:3450063-3450082 | None:intergenic | 35.0% | |
| ACAAACGGAAGAAAATGTTG+GGG | + | chr1.4:3454102-3454083 | None:intergenic | 35.0% | |
| AGTATAGTTGACAAAGAGAC+TGG | - | chr1.4:3449865-3449884 | MS.gene062773:intron | 35.0% | |
| AGTGGGAGATTTCTTCTTTA+AGG | + | chr1.4:3449785-3449804 | None:intergenic | 35.0% | |
| ATGAAGATGGTGATATCTCT+TGG | - | chr1.4:3454517-3454536 | MS.gene062773:CDS | 35.0% | |
| CATCAACGCAATAAAAAGAG+CGG | + | chr1.4:3450860-3450879 | None:intergenic | 35.0% | |
| CCAAAATGTCAATCAAATGG+TGG | - | chr1.4:3452288-3452307 | MS.gene062773:intron | 35.0% | |
| GAGAAAAAACAAATACGACG+GGG | + | chr1.4:3450535-3450554 | None:intergenic | 35.0% | |
| TAAACATAGCAATGTTTGCC+AGG | + | chr1.4:3454624-3454643 | None:intergenic | 35.0% | |
| TAAAGGAAGGTTAATCGAAG+AGG | - | chr1.4:3454575-3454594 | MS.gene062773:CDS | 35.0% | |
| TACAATTGGAATTGGTACGT+GGG | - | chr1.4:3449822-3449841 | MS.gene062773:intron | 35.0% | |
| TACCAAGTGATATATGCACA+CGG | + | chr1.4:3452524-3452543 | None:intergenic | 35.0% | |
| TCTCACTTGATGAATAGCAT+TGG | - | chr1.4:3450317-3450336 | MS.gene062773:intron | 35.0% | |
| TCTGCATAGAACATAATTGC+TGG | + | chr1.4:3450234-3450253 | None:intergenic | 35.0% | |
| TGGTATCACAAAGAATCCTT+GGG | - | chr1.4:3449696-3449715 | MS.gene062773:CDS | 35.0% | |
| TTGGTATCACAAAGAATCCT+TGG | - | chr1.4:3449695-3449714 | MS.gene062773:CDS | 35.0% | |
| ! | AAACGCTTGATTCGTACAAT+TGG | - | chr1.4:3449808-3449827 | MS.gene062773:intron | 35.0% |
| ! | AAGAGTAACACTTCTGAAGA+TGG | - | chr1.4:3449925-3449944 | MS.gene062773:intron | 35.0% |
| ! | AAGTGTTACTCTTCTCAAAG+CGG | + | chr1.4:3449918-3449937 | None:intergenic | 35.0% |
| ! | AGATTTTTCCTCTGTCGTAT+TGG | + | chr1.4:3454463-3454482 | None:intergenic | 35.0% |
| ! | ATAACATGCTTTGCCTCTTT+TGG | + | chr1.4:3451301-3451320 | None:intergenic | 35.0% |
| ! | CATAGACATTTCAAGTGACA+TGG | - | chr1.4:3452754-3452773 | MS.gene062773:intron | 35.0% |
| ! | CCACCATTTGATTGACATTT+TGG | + | chr1.4:3452291-3452310 | None:intergenic | 35.0% |
| ! | TAACATGCTTTGCCTCTTTT+GGG | + | chr1.4:3451300-3451319 | None:intergenic | 35.0% |
| ! | TGAATAGCATTGGACAAGAT+AGG | - | chr1.4:3450327-3450346 | MS.gene062773:intron | 35.0% |
| ! | TGTCACTTGAAATGTCTATG+TGG | + | chr1.4:3452754-3452773 | None:intergenic | 35.0% |
| ! | TTATTTGTTGAAGGAACCCA+GGG | - | chr1.4:3452425-3452444 | MS.gene062773:intron | 35.0% |
| ! | TTTAGGACATCATTGTTTCG+AGG | - | chr1.4:3452247-3452266 | MS.gene062773:intron | 35.0% |
| ! | TTTATTTGTTGAAGGAACCC+AGG | - | chr1.4:3452424-3452443 | MS.gene062773:intron | 35.0% |
| !! | GTTGTTGCTGGATTTTTCAA+TGG | - | chr1.4:3453447-3453466 | MS.gene062773:intron | 35.0% |
| !!! | ACACAGATCTGGTTTTTTTC+CGG | + | chr1.4:3453314-3453333 | None:intergenic | 35.0% |
| !!! | GGAAACGTTTTTTTAGTCCT+AGG | + | chr1.4:3449897-3449916 | None:intergenic | 35.0% |
| !!! | GTTTTTGGTCCCTGTAAAAT+TGG | + | chr1.4:3453950-3453969 | None:intergenic | 35.0% |
| !!! | GTTTTTTTAGTCCTAGGGTT+TGG | + | chr1.4:3449891-3449910 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCCGGCAAATTCA+GGG | + | chr1.4:3453303-3453322 | None:intergenic | 35.0% |
| AAAGGAATGAAGGAGAGTGA+TGG | + | chr1.4:3453228-3453247 | None:intergenic | 40.0% | |
| AAATGTCTATGTGGCATGTC+TGG | + | chr1.4:3452745-3452764 | None:intergenic | 40.0% | |
| AAGGAATGAAGGAGAGTGAT+GGG | + | chr1.4:3453227-3453246 | None:intergenic | 40.0% | |
| AATAAGCGAGCTTCCAACAT+TGG | + | chr1.4:3454139-3454158 | None:intergenic | 40.0% | |
| AATCAAATGGTGGCCACAAA+AGG | - | chr1.4:3452298-3452317 | MS.gene062773:intron | 40.0% | |
| AATGTCTATGTGGCATGTCT+GGG | + | chr1.4:3452744-3452763 | None:intergenic | 40.0% | |
| ACATTGATATAGTTGGGCAC+TGG | + | chr1.4:3449658-3449677 | None:intergenic | 40.0% | |
| ACCAAGTGATATATGCACAC+GGG | + | chr1.4:3452523-3452542 | None:intergenic | 40.0% | |
| ACGAATCAAGCGTTTACTAG+TGG | + | chr1.4:3449803-3449822 | None:intergenic | 40.0% | |
| AGAAAAAGTCAGCCCAAAAG+AGG | - | chr1.4:3451285-3451304 | MS.gene062773:intron | 40.0% | |
| CAAAGAATCCTTGGGAGATT+TGG | - | chr1.4:3449704-3449723 | MS.gene062773:CDS | 40.0% | |
| CGAATCAAGCGTTTACTAGT+GGG | + | chr1.4:3449802-3449821 | None:intergenic | 40.0% | |
| GAACTCATAGAGGCGAATAA+AGG | - | chr1.4:3454558-3454577 | MS.gene062773:CDS | 40.0% | |
| GAGAAACAGTAACACAGATC+TGG | + | chr1.4:3453325-3453344 | None:intergenic | 40.0% | |
| GCAAGGACCAAACTTACAAA+CGG | - | chr1.4:3454068-3454087 | MS.gene062773:intron | 40.0% | |
| GCAAGGACCAAACTTACAAA+CGG | + | chr1.4:3454087-3454068 | None:intergenic | 40.0% | |
| GTACAATTGGAATTGGTACG+TGG | - | chr1.4:3449821-3449840 | MS.gene062773:intron | 40.0% | |
| TAGCAATGTTTGCCAGGATT+TGG | + | chr1.4:3454618-3454637 | None:intergenic | 40.0% | |
| TCATAGAGGCGAATAAAGGA+AGG | - | chr1.4:3454562-3454581 | MS.gene062773:CDS | 40.0% | |
| TGCTGGTCAGCTGAAAAATT+TGG | + | chr1.4:3452062-3452081 | None:intergenic | 40.0% | |
| TGGAAGCTCGCTTATTTGTA+GGG | - | chr1.4:3454143-3454162 | MS.gene062773:intron | 40.0% | |
| TTGGAAGCTCGCTTATTTGT+AGG | - | chr1.4:3454142-3454161 | MS.gene062773:intron | 40.0% | |
| ! | AGTAACACTTCTGAAGATGG+TGG | - | chr1.4:3449928-3449947 | MS.gene062773:intron | 40.0% |
| ! | CTCTTGCATTCTCATTTTCC+AGG | - | chr1.4:3454368-3454387 | MS.gene062773:CDS | 40.0% |
| ! | TTTTGCAAGGGAACTCATAG+AGG | - | chr1.4:3454548-3454567 | MS.gene062773:CDS | 40.0% |
| !! | ACCAGTCGATTTTCAAGGTT+CGG | + | chr1.4:3453404-3453423 | None:intergenic | 40.0% |
| !! | AGCTTTAAGTCCAAGAACCA+CGG | + | chr1.4:3452355-3452374 | None:intergenic | 40.0% |
| !! | TAAAAGTGCCAATACGACAG+AGG | - | chr1.4:3454452-3454471 | MS.gene062773:CDS | 40.0% |
| !! | TCGATTTTCAAGGTTCGGAT+CGG | + | chr1.4:3453399-3453418 | None:intergenic | 40.0% |
| !!! | CTGCTTTTGCGTTTTTTTGC+AGG | - | chr1.4:3450208-3450227 | MS.gene062773:intron | 40.0% |
| !!! | GGTTTTTTTCCGGCAAATTC+AGG | + | chr1.4:3453304-3453323 | None:intergenic | 40.0% |
| AACTCTTCCCAAATCTCCCA+AGG | + | chr1.4:3449715-3449734 | None:intergenic | 45.0% | |
| AGGAAGGTTAATCGAAGAGG+AGG | - | chr1.4:3454578-3454597 | MS.gene062773:CDS | 45.0% | |
| AGTTCCCTTGCAAAAAGCTC+AGG | + | chr1.4:3454543-3454562 | None:intergenic | 45.0% | |
| CAAGGAAAGACAGTTGTTCC+CGG | - | chr1.4:3450350-3450369 | MS.gene062773:intron | 45.0% | |
| CCAAGTGATATATGCACACG+GGG | + | chr1.4:3452522-3452541 | None:intergenic | 45.0% | |
| CGAAGAAGTTCACCATCTGT+AGG | + | chr1.4:3449604-3449623 | None:intergenic | 45.0% | |
| GCCTAGTCAGCACTATTTGA+CGG | - | chr1.4:3454046-3454065 | MS.gene062773:intron | 45.0% | |
| GGAGAAAGGTGGGAAATACT+TGG | - | chr1.4:3452319-3452338 | MS.gene062773:intron | 45.0% | |
| TCCGAACCTTGAAAATCGAC+TGG | - | chr1.4:3453400-3453419 | MS.gene062773:intron | 45.0% | |
| TCTCTCGAAAAGGTTGTTGC+TGG | - | chr1.4:3453435-3453454 | MS.gene062773:intron | 45.0% | |
| TGGTCATTCCCTGAATTTGC+CGG | - | chr1.4:3453292-3453311 | MS.gene062773:intron | 45.0% | |
| ! | AGCATTGGACAAGATAGGCA+AGG | - | chr1.4:3450332-3450351 | MS.gene062773:intron | 45.0% |
| ! | CGTGGACATTTCAAGTGACA+TGG | + | chr1.4:3453999-3454018 | None:intergenic | 45.0% |
| ! | TGTCACTTGAAATGTCCACG+TGG | - | chr1.4:3453999-3454018 | MS.gene062773:intron | 45.0% |
| ! | TTCCCACCTTTCTCCTTTTG+TGG | + | chr1.4:3452314-3452333 | None:intergenic | 45.0% |
| ! | TTGGCCTGAGCTTTTTGCAA+GGG | - | chr1.4:3454536-3454555 | MS.gene062773:CDS | 45.0% |
| !! | ACACTTCTGAAGATGGTGGA+TGG | - | chr1.4:3449932-3449951 | MS.gene062773:intron | 45.0% |
| !! | CCTTTTCGAGAGATCAGAAG+CGG | + | chr1.4:3453428-3453447 | None:intergenic | 45.0% |
| !! | CGATTTTCAAGGTTCGGATC+GGG | + | chr1.4:3453398-3453417 | None:intergenic | 45.0% |
| !!! | AGTTTTTAGAAGAGCGTCGC+CGG | + | chr1.4:3453571-3453590 | None:intergenic | 45.0% |
| !!! | AGTTTTATATATTTATTTTT+TGG | - | chr1.4:3451700-3451719 | MS.gene062773:intron | 5.0% |
| !!! | TTTTATTTAAATACAAAATT+TGG | - | chr1.4:3451975-3451994 | MS.gene062773:intron | 5.0% |
| !!! | TTTTGTATTTAAATAAAATT+TGG | + | chr1.4:3451973-3451992 | None:intergenic | 5.0% |
| AAATGTCCACGTGGCATGTC+TGG | - | chr1.4:3454008-3454027 | MS.gene062773:intron | 50.0% | |
| AATGTCCACGTGGCATGTCT+GGG | - | chr1.4:3454009-3454028 | MS.gene062773:intron | 50.0% | |
| CCAGAAAAGACCGTGGTTCT+TGG | - | chr1.4:3452342-3452361 | MS.gene062773:intron | 50.0% | |
| CCCCGTGTGCATATATCACT+TGG | - | chr1.4:3452519-3452538 | MS.gene062773:intron | 50.0% | |
| CCGCTTCTGATCTCTCGAAA+AGG | - | chr1.4:3453425-3453444 | MS.gene062773:intron | 50.0% | |
| CGGATCGGGAAACAAAGAGT+GGG | + | chr1.4:3453384-3453403 | None:intergenic | 50.0% | |
| GCCTAGTCAGCACAGTTTGA+CGG | + | chr1.4:3452707-3452726 | None:intergenic | 50.0% | |
| GGCCACAAAAGGAGAAAGGT+GGG | - | chr1.4:3452309-3452328 | MS.gene062773:intron | 50.0% | |
| GTCAGCACTATTTGACGGCA+AGG | - | chr1.4:3454051-3454070 | MS.gene062773:intron | 50.0% | |
| TACTTGGCCAGAAAAGACCG+TGG | - | chr1.4:3452335-3452354 | MS.gene062773:intron | 50.0% | |
| TCGGATCGGGAAACAAAGAG+TGG | + | chr1.4:3453385-3453404 | None:intergenic | 50.0% | |
| TGGCCACAAAAGGAGAAAGG+TGG | - | chr1.4:3452308-3452327 | MS.gene062773:intron | 50.0% | |
| TGGTGGCCACAAAAGGAGAA+AGG | - | chr1.4:3452305-3452324 | MS.gene062773:intron | 50.0% | |
| ! | AAAGAGACTGGCCAAACCCT+AGG | - | chr1.4:3449877-3449896 | MS.gene062773:intron | 50.0% |
| ! | ACAGATATGGCGTTTTCCGC+AGG | + | chr1.4:3450377-3450396 | None:intergenic | 50.0% |
| ! | CCAAGAACCACGGTCTTTTC+TGG | + | chr1.4:3452345-3452364 | None:intergenic | 50.0% |
| ! | CTTGGCCTGAGCTTTTTGCA+AGG | - | chr1.4:3454535-3454554 | MS.gene062773:CDS | 50.0% |
| !! | GCCGTCAAATAGTGCTGACT+AGG | + | chr1.4:3454050-3454069 | None:intergenic | 50.0% |
| !! | GCGGAACCAGTCGATTTTCA+AGG | + | chr1.4:3453409-3453428 | None:intergenic | 50.0% |
| ACGTGGGAAGCTGAAGACAC+CGG | - | chr1.4:3449838-3449857 | MS.gene062773:intron | 55.0% | |
| CAAGTGACATGGCTGCCATG+TGG | - | chr1.4:3452765-3452784 | MS.gene062773:intron | 55.0% | |
| CAAGTGACATGGCTGCCATG+TGG | + | chr1.4:3452784-3452765 | None:intergenic | 55.0% | |
| GTCAGCACAGTTTGACGGCA+AGG | + | chr1.4:3452702-3452721 | None:intergenic | 55.0% | |
| ! | TATGGCGTTTTCCGCAGGTC+CGG | + | chr1.4:3450372-3450391 | None:intergenic | 55.0% |
| !! | GCCGTCAAACTGTGCTGACT+AGG | - | chr1.4:3452703-3452722 | MS.gene062773:intron | 55.0% |
| GACAGTTGTTCCCGGACCTG+CGG | - | chr1.4:3450358-3450377 | MS.gene062773:intron | 60.0% | |
| GTTGACCCAGACATGCCACG+TGG | + | chr1.4:3454017-3454036 | None:intergenic | 60.0% | |
| ! | ATGGCGTTTTCCGCAGGTCC+GGG | + | chr1.4:3450371-3450390 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 3449565 | 3454644 | 3449565 | ID=MS.gene062773 |
| chr1.4 | mRNA | 3449565 | 3454644 | 3449565 | ID=MS.gene062773.t1;Parent=MS.gene062773 |
| chr1.4 | exon | 3454207 | 3454644 | 3454207 | ID=MS.gene062773.t1.exon1;Parent=MS.gene062773.t1 |
| chr1.4 | CDS | 3454207 | 3454644 | 3454207 | ID=cds.MS.gene062773.t1;Parent=MS.gene062773.t1 |
| chr1.4 | exon | 3453815 | 3453979 | 3453815 | ID=MS.gene062773.t1.exon2;Parent=MS.gene062773.t1 |
| chr1.4 | CDS | 3453815 | 3453979 | 3453815 | ID=cds.MS.gene062773.t1;Parent=MS.gene062773.t1 |
| chr1.4 | exon | 3451823 | 3451957 | 3451823 | ID=MS.gene062773.t1.exon3;Parent=MS.gene062773.t1 |
| chr1.4 | CDS | 3451823 | 3451957 | 3451823 | ID=cds.MS.gene062773.t1;Parent=MS.gene062773.t1 |
| chr1.4 | exon | 3449565 | 3449819 | 3449565 | ID=MS.gene062773.t1.exon4;Parent=MS.gene062773.t1 |
| chr1.4 | CDS | 3449565 | 3449819 | 3449565 | ID=cds.MS.gene062773.t1;Parent=MS.gene062773.t1 |
| Gene Sequence |
| Protein sequence |
