Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063213.t1 | XP_013441774.1 | 91.9 | 371 | 13 | 1 | 1 | 354 | 1 | 371 | 8.80E-197 | 696 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063213.t1 | Q9LW62 | 80.1 | 327 | 62 | 2 | 1 | 326 | 1 | 325 | 3.9e-153 | 542.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063213.t1 | A0A072TET6 | 91.9 | 371 | 13 | 1 | 1 | 354 | 1 | 371 | 6.3e-197 | 696.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063213.t1 | MTR_0492s0030 | 91.914 | 371 | 13 | 1 | 1 | 354 | 1 | 371 | 0.0 | 694 |
MS.gene063213.t1 | MTR_0543s0020 | 91.914 | 371 | 13 | 1 | 1 | 354 | 1 | 371 | 0.0 | 694 |
MS.gene063213.t1 | MTR_1g042280 | 78.108 | 370 | 62 | 3 | 1 | 354 | 2 | 368 | 0.0 | 583 |
MS.gene063213.t1 | MTR_1g075870 | 74.114 | 367 | 72 | 3 | 1 | 346 | 2 | 366 | 0.0 | 551 |
MS.gene063213.t1 | MTR_1g075870 | 79.511 | 327 | 65 | 1 | 1 | 327 | 2 | 326 | 0.0 | 540 |
MS.gene063213.t1 | MTR_7g097160 | 77.982 | 327 | 68 | 3 | 1 | 325 | 1 | 325 | 0.0 | 523 |
MS.gene063213.t1 | MTR_1g069720 | 79.672 | 305 | 60 | 1 | 1 | 305 | 1 | 303 | 0.0 | 513 |
MS.gene063213.t1 | MTR_1g042280 | 84.775 | 289 | 42 | 1 | 40 | 328 | 9 | 295 | 0.0 | 505 |
MS.gene063213.t1 | MTR_4g126010 | 68.675 | 332 | 98 | 2 | 1 | 328 | 1 | 330 | 1.37e-171 | 485 |
MS.gene063213.t1 | MTR_2g099670 | 66.286 | 350 | 109 | 3 | 1 | 346 | 1 | 345 | 9.79e-171 | 484 |
MS.gene063213.t1 | MTR_8g018310 | 70.440 | 318 | 89 | 3 | 1 | 318 | 1 | 313 | 2.30e-167 | 475 |
MS.gene063213.t1 | MTR_8g018310 | 70.440 | 318 | 89 | 3 | 1 | 318 | 1 | 313 | 5.71e-166 | 469 |
MS.gene063213.t1 | MTR_1g075870 | 80.074 | 271 | 52 | 1 | 58 | 328 | 2 | 270 | 3.29e-163 | 457 |
MS.gene063213.t1 | MTR_2g039930 | 63.158 | 342 | 108 | 3 | 1 | 332 | 1 | 334 | 5.17e-161 | 459 |
MS.gene063213.t1 | MTR_6g087070 | 69.010 | 313 | 94 | 2 | 1 | 313 | 1 | 310 | 6.81e-161 | 457 |
MS.gene063213.t1 | MTR_8g102930 | 62.185 | 357 | 116 | 4 | 1 | 343 | 1 | 352 | 7.29e-160 | 454 |
MS.gene063213.t1 | MTR_3g110180 | 60.756 | 344 | 112 | 3 | 1 | 331 | 1 | 334 | 3.14e-151 | 433 |
MS.gene063213.t1 | MTR_3g110180 | 60.756 | 344 | 111 | 4 | 1 | 331 | 1 | 333 | 9.35e-150 | 429 |
MS.gene063213.t1 | MTR_1g004990 | 61.661 | 313 | 118 | 1 | 1 | 313 | 1 | 311 | 1.18e-143 | 413 |
MS.gene063213.t1 | MTR_2g099670 | 65.052 | 289 | 92 | 3 | 62 | 346 | 10 | 293 | 2.87e-134 | 389 |
MS.gene063213.t1 | MTR_2g039930 | 62.452 | 261 | 80 | 3 | 82 | 332 | 1 | 253 | 7.97e-116 | 341 |
MS.gene063213.t1 | MTR_7g097160 | 75.543 | 184 | 41 | 3 | 144 | 325 | 25 | 206 | 3.20e-92 | 279 |
MS.gene063213.t1 | MTR_7g006030 | 36.860 | 293 | 164 | 6 | 3 | 279 | 29 | 316 | 8.09e-55 | 189 |
MS.gene063213.t1 | MTR_3g110240 | 38.163 | 283 | 160 | 6 | 3 | 275 | 113 | 390 | 5.47e-54 | 188 |
MS.gene063213.t1 | MTR_7g085540 | 36.620 | 284 | 162 | 5 | 9 | 279 | 147 | 425 | 2.60e-52 | 184 |
MS.gene063213.t1 | MTR_1g007150 | 36.396 | 283 | 165 | 6 | 3 | 275 | 116 | 393 | 5.34e-52 | 183 |
MS.gene063213.t1 | MTR_1g116210 | 36.268 | 284 | 165 | 6 | 3 | 275 | 111 | 389 | 1.53e-51 | 182 |
MS.gene063213.t1 | MTR_8g014050 | 35.915 | 284 | 158 | 7 | 9 | 275 | 128 | 404 | 2.87e-47 | 170 |
MS.gene063213.t1 | MTR_7g116400 | 52.128 | 94 | 38 | 3 | 80 | 172 | 1 | 88 | 1.05e-21 | 88.6 |
MS.gene063213.t1 | MTR_5g022030 | 27.434 | 226 | 144 | 6 | 8 | 224 | 98 | 312 | 1.14e-14 | 75.5 |
MS.gene063213.t1 | MTR_5g022030 | 27.434 | 226 | 144 | 6 | 8 | 224 | 98 | 312 | 1.32e-14 | 75.1 |
MS.gene063213.t1 | MTR_5g007590 | 45.588 | 68 | 29 | 1 | 72 | 139 | 54 | 113 | 1.31e-12 | 64.7 |
MS.gene063213.t1 | MTR_8g079790 | 27.948 | 229 | 126 | 8 | 6 | 213 | 122 | 332 | 6.39e-12 | 67.0 |
MS.gene063213.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 7.40e-12 | 66.6 |
MS.gene063213.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 7.41e-12 | 66.2 |
MS.gene063213.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 8.08e-12 | 66.2 |
MS.gene063213.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 51 | 276 | 1.02e-11 | 65.9 |
MS.gene063213.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 1.62e-11 | 65.5 |
MS.gene063213.t1 | MTR_3g076540 | 24.896 | 241 | 141 | 7 | 5 | 216 | 90 | 319 | 2.12e-11 | 65.1 |
MS.gene063213.t1 | MTR_3g076540 | 24.896 | 241 | 141 | 7 | 5 | 216 | 8 | 237 | 2.63e-11 | 64.3 |
MS.gene063213.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 3.08e-11 | 64.7 |
MS.gene063213.t1 | MTR_5g092810 | 26.126 | 222 | 142 | 6 | 9 | 221 | 92 | 300 | 3.14e-11 | 64.7 |
MS.gene063213.t1 | MTR_3g092230 | 27.313 | 227 | 127 | 9 | 6 | 213 | 135 | 342 | 3.49e-11 | 64.7 |
MS.gene063213.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 4.58e-11 | 64.3 |
MS.gene063213.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 5.43e-11 | 64.3 |
MS.gene063213.t1 | MTR_4g128820 | 26.697 | 221 | 138 | 6 | 7 | 218 | 8 | 213 | 8.59e-11 | 63.5 |
MS.gene063213.t1 | MTR_4g086660 | 26.991 | 226 | 129 | 8 | 6 | 213 | 134 | 341 | 9.56e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene063213.t1 | AT3G23340 | 80.122 | 327 | 62 | 2 | 1 | 326 | 1 | 325 | 0.0 | 543 |
MS.gene063213.t1 | AT4G14340 | 70.350 | 371 | 85 | 5 | 1 | 348 | 7 | 375 | 0.0 | 524 |
MS.gene063213.t1 | AT4G14340 | 75.684 | 329 | 77 | 2 | 1 | 328 | 7 | 333 | 0.0 | 517 |
MS.gene063213.t1 | AT1G03930 | 74.030 | 335 | 79 | 2 | 1 | 329 | 1 | 333 | 0.0 | 515 |
MS.gene063213.t1 | AT3G23340 | 77.064 | 327 | 58 | 3 | 1 | 326 | 1 | 311 | 0.0 | 511 |
MS.gene063213.t1 | AT4G28540 | 69.382 | 356 | 97 | 3 | 1 | 346 | 5 | 358 | 1.06e-180 | 509 |
MS.gene063213.t1 | AT5G44100 | 74.328 | 335 | 77 | 3 | 1 | 329 | 1 | 332 | 1.60e-180 | 509 |
MS.gene063213.t1 | AT5G44100 | 74.328 | 335 | 77 | 3 | 1 | 329 | 1 | 332 | 1.60e-180 | 509 |
MS.gene063213.t1 | AT5G43320 | 73.178 | 343 | 84 | 4 | 1 | 337 | 1 | 341 | 1.58e-179 | 506 |
MS.gene063213.t1 | AT5G43320 | 74.107 | 336 | 80 | 3 | 1 | 331 | 1 | 334 | 3.20e-178 | 499 |
MS.gene063213.t1 | AT5G43320 | 74.107 | 336 | 80 | 3 | 1 | 331 | 1 | 334 | 3.20e-178 | 499 |
MS.gene063213.t1 | AT1G04440 | 67.297 | 370 | 94 | 5 | 1 | 349 | 1 | 364 | 4.79e-178 | 502 |
MS.gene063213.t1 | AT4G26100 | 67.262 | 336 | 104 | 2 | 1 | 332 | 1 | 334 | 2.36e-170 | 482 |
MS.gene063213.t1 | AT2G19470 | 67.155 | 341 | 98 | 3 | 1 | 331 | 1 | 337 | 4.24e-169 | 478 |
MS.gene063213.t1 | AT1G72710 | 68.072 | 332 | 99 | 3 | 1 | 328 | 1 | 329 | 2.62e-168 | 478 |
MS.gene063213.t1 | AT5G57015 | 70.032 | 317 | 92 | 2 | 1 | 316 | 1 | 315 | 1.13e-166 | 472 |
MS.gene063213.t1 | AT4G28880 | 66.774 | 310 | 101 | 1 | 1 | 310 | 1 | 308 | 6.80e-156 | 444 |
MS.gene063213.t1 | AT4G28880 | 66.774 | 310 | 101 | 1 | 1 | 310 | 1 | 308 | 6.80e-156 | 444 |
MS.gene063213.t1 | AT4G28880 | 66.774 | 310 | 101 | 1 | 1 | 310 | 1 | 308 | 6.80e-156 | 444 |
MS.gene063213.t1 | AT4G28880 | 66.774 | 310 | 101 | 1 | 1 | 310 | 1 | 308 | 6.80e-156 | 444 |
MS.gene063213.t1 | AT4G28860 | 59.943 | 352 | 134 | 2 | 1 | 352 | 1 | 345 | 1.32e-155 | 442 |
MS.gene063213.t1 | AT4G28860 | 59.943 | 352 | 134 | 2 | 1 | 352 | 1 | 345 | 7.67e-155 | 441 |
MS.gene063213.t1 | AT4G08800 | 61.745 | 298 | 80 | 3 | 1 | 298 | 1 | 264 | 3.42e-131 | 376 |
MS.gene063213.t1 | AT2G25760 | 39.362 | 282 | 154 | 6 | 9 | 275 | 107 | 386 | 5.52e-56 | 194 |
MS.gene063213.t1 | AT2G25760 | 39.007 | 282 | 152 | 5 | 9 | 275 | 107 | 383 | 1.51e-55 | 192 |
MS.gene063213.t1 | AT3G13670 | 35.495 | 293 | 168 | 6 | 3 | 279 | 129 | 416 | 6.17e-52 | 183 |
MS.gene063213.t1 | AT3G03940 | 35.915 | 284 | 164 | 5 | 9 | 279 | 140 | 418 | 9.24e-51 | 180 |
MS.gene063213.t1 | AT5G18190 | 35.563 | 284 | 165 | 5 | 9 | 279 | 130 | 408 | 1.16e-50 | 179 |
MS.gene063213.t1 | AT5G18190 | 35.563 | 284 | 165 | 5 | 9 | 279 | 130 | 408 | 1.16e-50 | 179 |
MS.gene063213.t1 | AT2G17890 | 26.339 | 224 | 149 | 6 | 8 | 224 | 107 | 321 | 1.55e-13 | 72.0 |
MS.gene063213.t1 | AT3G50530 | 27.556 | 225 | 129 | 6 | 6 | 213 | 145 | 352 | 3.07e-13 | 71.2 |
MS.gene063213.t1 | AT3G50530 | 26.210 | 248 | 134 | 8 | 6 | 213 | 145 | 383 | 2.03e-12 | 68.6 |
MS.gene063213.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.09e-12 | 68.6 |
MS.gene063213.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.09e-12 | 68.6 |
MS.gene063213.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.09e-12 | 68.6 |
MS.gene063213.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 100 | 328 | 2.11e-12 | 68.6 |
MS.gene063213.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 100 | 328 | 2.11e-12 | 68.6 |
MS.gene063213.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 70 | 295 | 3.49e-12 | 67.4 |
MS.gene063213.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 62 | 287 | 3.74e-12 | 67.4 |
MS.gene063213.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 70 | 295 | 3.81e-12 | 67.4 |
MS.gene063213.t1 | AT5G39440 | 28.319 | 226 | 139 | 6 | 9 | 226 | 19 | 229 | 3.63e-11 | 64.7 |
MS.gene063213.t1 | AT3G49370 | 26.923 | 234 | 133 | 9 | 7 | 221 | 140 | 354 | 3.91e-11 | 64.7 |
MS.gene063213.t1 | AT5G24430 | 28.070 | 228 | 138 | 9 | 7 | 221 | 141 | 355 | 9.67e-11 | 63.5 |
Find 77 sgRNAs with CRISPR-Local
Find 211 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCATTTGGGGAGCTTTATT+TGG | 0.240792 | 1.2:+26682339 | MS.gene063213:CDS |
CTAAATATTGGTACCTCTAT+TGG | 0.252438 | 1.2:-26685030 | None:intergenic |
GTGATGGCTGTTGACCTTCT+TGG | 0.294544 | 1.2:+26683630 | MS.gene063213:CDS |
ATATCTTAAGAAACTCTTTC+GGG | 0.305643 | 1.2:+26685307 | MS.gene063213:CDS |
GTTATGATGGATATTGTTAT+TGG | 0.306877 | 1.2:+26682280 | None:intergenic |
TTCAAGCTTGGCAGCAAACT+TGG | 0.307902 | 1.2:+26682310 | MS.gene063213:CDS |
CATATCTTAAGAAACTCTTT+CGG | 0.313975 | 1.2:+26685306 | MS.gene063213:CDS |
GCATTTGGGGAGCTTTATTT+GGG | 0.341011 | 1.2:+26682340 | MS.gene063213:CDS |
AGTTTGACTTTGTATTTGAT+TGG | 0.343555 | 1.2:+26685449 | MS.gene063213:CDS |
TTTAAGACTGGTTTCACATT+TGG | 0.346834 | 1.2:-26685602 | None:intergenic |
AAACTTGGGAGTGGAGCATT+TGG | 0.356250 | 1.2:+26682325 | MS.gene063213:CDS |
TTCTTAAGATATGAATAATC+AGG | 0.358182 | 1.2:-26685296 | None:intergenic |
TTTAACACTCACCTTGGAAT+TGG | 0.359788 | 1.2:+26684664 | MS.gene063213:CDS |
AACTTGGGAGTGGAGCATTT+GGG | 0.378231 | 1.2:+26682326 | MS.gene063213:CDS |
AGAAGAAATATGAATGGATA+AGG | 0.378535 | 1.2:+26684989 | MS.gene063213:CDS |
TCAGGAAGAAATAATGGCTC+TGG | 0.388829 | 1.2:+26685938 | MS.gene063213:intron |
AAAGCCCGAGAACTTTCTAA+TGG | 0.388867 | 1.2:+26683882 | MS.gene063213:CDS |
TGTATGAGTCTAAATTGTAT+AGG | 0.392182 | 1.2:+26683336 | MS.gene063213:CDS |
CAGACTGCAGCATAGGTCTT+TGG | 0.407190 | 1.2:+26685964 | MS.gene063213:CDS |
CAGGTGTACATTATTGACTA+TGG | 0.410304 | 1.2:+26684289 | MS.gene063213:intron |
GAGAACTTTCTAATGGGTTC+AGG | 0.413955 | 1.2:+26683889 | MS.gene063213:CDS |
AGAGGAAGTGGCTCTTAAAC+TGG | 0.426091 | 1.2:+26682461 | MS.gene063213:CDS |
TATGGTCCTGTGTTTAAGAC+TGG | 0.431845 | 1.2:-26685614 | None:intergenic |
GTTATAGTCTTCCATGGCAT+GGG | 0.446603 | 1.2:+26684941 | MS.gene063213:intron |
TTAGAACTGGAACCACTTTG+TGG | 0.457776 | 1.2:-26685487 | None:intergenic |
AGGGAAAACAAGAATCTCAT+TGG | 0.467420 | 1.2:+26684622 | MS.gene063213:intron |
AAGCCCGAGAACTTTCTAAT+GGG | 0.468302 | 1.2:+26683883 | MS.gene063213:CDS |
ATTTGATTGGACTAAATTGA+AGG | 0.470659 | 1.2:+26685462 | MS.gene063213:CDS |
CGTTCTAATCTCTCTTCATA+TGG | 0.470694 | 1.2:-26685632 | None:intergenic |
TGAACCCATTAGAAAGTTCT+CGG | 0.471922 | 1.2:-26683887 | None:intergenic |
ACCGCAATGATCGACAATAG+TGG | 0.481921 | 1.2:-26685262 | None:intergenic |
TGTTATAGTCTTCCATGGCA+TGG | 0.485138 | 1.2:+26684940 | MS.gene063213:intron |
GAAGAAATATGAATGGATAA+GGG | 0.486661 | 1.2:+26684990 | MS.gene063213:CDS |
TTATATATTATGTACCTGTA+TGG | 0.490253 | 1.2:-26684355 | None:intergenic |
ACTCCATACCACTTTATATG+AGG | 0.493402 | 1.2:-26683591 | None:intergenic |
TTAAATAAGTCTTCAAGACT+TGG | 0.494574 | 1.2:-26683654 | None:intergenic |
TTCAGGCAGCAAGATAAATC+AGG | 0.499327 | 1.2:+26683906 | MS.gene063213:CDS |
CAGGAAGAAATAATGGCTCT+GGG | 0.501297 | 1.2:+26685939 | MS.gene063213:intron |
CCACTTTATATGAGGTATGC+CGG | 0.507981 | 1.2:-26683583 | None:intergenic |
CGGGAACTATTCATTAGAGA+AGG | 0.512534 | 1.2:+26685326 | MS.gene063213:CDS |
AAAGAAGCTAACTCCAATAG+AGG | 0.515041 | 1.2:+26685017 | MS.gene063213:CDS |
ATGATGGATATTGTTATTGG+TGG | 0.521288 | 1.2:+26682283 | None:intergenic |
CACAAAGGCACATACCATAC+AGG | 0.527052 | 1.2:+26684341 | MS.gene063213:CDS |
GAGAGATTAGAACGGCCTAC+AGG | 0.527482 | 1.2:+26685641 | MS.gene063213:CDS |
AAATTGTATAGGCTTCTTCA+AGG | 0.528424 | 1.2:+26683347 | MS.gene063213:CDS |
AGCTATACTTACTAGTTGAT+CGG | 0.530567 | 1.2:-26683721 | None:intergenic |
CTGGGGACAGACTGCAGCAT+AGG | 0.535067 | 1.2:+26685957 | MS.gene063213:CDS |
TCAAGCTTGGCAGCAAACTT+GGG | 0.536290 | 1.2:+26682311 | MS.gene063213:CDS |
CTAAAGAGAAGAAATATGAA+TGG | 0.541076 | 1.2:+26684983 | MS.gene063213:CDS |
ATTGGTGGAAAATTCAAGCT+TGG | 0.542077 | 1.2:+26682298 | MS.gene063213:CDS |
CTTCAAGACTTGGTCCAAGA+AGG | 0.548592 | 1.2:-26683644 | None:intergenic |
TGTGAAAACTCAAGAGGAAG+TGG | 0.550394 | 1.2:+26682449 | MS.gene063213:CDS |
TTCATGCCGTGCCCATGCCA+TGG | 0.555518 | 1.2:-26684952 | None:intergenic |
CTTGGCAGCAAACTTGGGAG+TGG | 0.558158 | 1.2:+26682316 | MS.gene063213:CDS |
ATACCTCATATAAAGTGGTA+TGG | 0.563349 | 1.2:+26683588 | MS.gene063213:CDS |
GAACCCATTAGAAAGTTCTC+GGG | 0.565868 | 1.2:-26683886 | None:intergenic |
CCGGCATACCTCATATAAAG+TGG | 0.567709 | 1.2:+26683583 | MS.gene063213:CDS |
TGCACAACTTACCAATTCCA+AGG | 0.568178 | 1.2:-26684675 | None:intergenic |
TTAGACTCATACAGAAGTTG+AGG | 0.573846 | 1.2:-26683326 | None:intergenic |
AGAGATGATCTAGAATCGCT+TGG | 0.574171 | 1.2:+26684814 | MS.gene063213:CDS |
ACTTGGGAGTGGAGCATTTG+GGG | 0.577875 | 1.2:+26682327 | MS.gene063213:CDS |
TATAAAGTGGTATGGAGTCG+AGG | 0.580298 | 1.2:+26683596 | MS.gene063213:CDS |
AGTCTTCCATGGCATGGGCA+CGG | 0.583186 | 1.2:+26684946 | MS.gene063213:intron |
GTGAAACCAGTCTTAAACAC+AGG | 0.585633 | 1.2:+26685608 | MS.gene063213:CDS |
AATCATGGAAGAACATCTGA+AGG | 0.597406 | 1.2:-26686004 | None:intergenic |
TCCACTATTGTCGATCATTG+CGG | 0.598884 | 1.2:+26685261 | MS.gene063213:CDS |
ATAAAGTGGTATGGAGTCGA+GGG | 0.602710 | 1.2:+26683597 | MS.gene063213:CDS |
TGTTGATGTGAAAACTCAAG+AGG | 0.614137 | 1.2:+26682443 | MS.gene063213:CDS |
AAATATGACGTGAACTCTGT+TGG | 0.622690 | 1.2:-26685239 | None:intergenic |
GTAGCGTATATGCACTATCG+TGG | 0.653910 | 1.2:+26683841 | MS.gene063213:CDS |
CGAGGGTGACTACAATGTGA+TGG | 0.664692 | 1.2:+26683614 | MS.gene063213:CDS |
ATTGTGATCTTAAAACACAA+AGG | 0.669161 | 1.2:+26684326 | MS.gene063213:CDS |
TTGTATAGGCTTCTTCAAGG+AGG | 0.676548 | 1.2:+26683350 | MS.gene063213:CDS |
AAATTGAAGGATCCACAAAG+TGG | 0.696056 | 1.2:+26685475 | MS.gene063213:CDS |
ACATCTGAAGGTGCATACGA+CGG | 0.698148 | 1.2:-26685992 | None:intergenic |
AGGAAGAAATAATGGCTCTG+GGG | 0.722212 | 1.2:+26685940 | MS.gene063213:intron |
CATATGAAGAGAGATTAGAA+CGG | 0.732307 | 1.2:+26685633 | MS.gene063213:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAAATTAATTTATTATAAA+TGG | + | chr1.2:26685409-26685428 | MS.gene063213:intron | 0.0% |
!! | AATTTCTTATTCAAATAAAT+TGG | + | chr1.2:26684743-26684762 | MS.gene063213:intron | 10.0% |
!!! | AAATTTTTAATTTCTTAAAC+AGG | + | chr1.2:26685199-26685218 | MS.gene063213:intron | 10.0% |
!!! | ACATAATATATAATTTTGTT+TGG | + | chr1.2:26684365-26684384 | MS.gene063213:intron | 10.0% |
!!! | CATAATATATAATTTTGTTT+GGG | + | chr1.2:26684366-26684385 | MS.gene063213:intron | 10.0% |
!!! | CTAATAAATTTTATTTTAGT+CGG | + | chr1.2:26685865-26685884 | MS.gene063213:intron | 10.0% |
!! | ATTTAATTGAACTAAAGATT+TGG | - | chr1.2:26685137-26685156 | None:intergenic | 15.0% |
!! | ATTTATTAAATTATCAGCAT+AGG | - | chr1.2:26685718-26685737 | None:intergenic | 15.0% |
!! | CGACTAAAATAAAATTTATT+AGG | - | chr1.2:26685867-26685886 | None:intergenic | 15.0% |
!! | TATGCTGATAATTTAATAAA+TGG | + | chr1.2:26685717-26685736 | MS.gene063213:intron | 15.0% |
!! | TTTAATTGAACTAAAGATTT+GGG | - | chr1.2:26685136-26685155 | None:intergenic | 15.0% |
!!! | ATGTTTTCTTTGAATAATTT+GGG | + | chr1.2:26682404-26682423 | MS.gene063213:intron | 15.0% |
!!! | TATGTTTTCTTTGAATAATT+TGG | + | chr1.2:26682403-26682422 | MS.gene063213:intron | 15.0% |
!!! | TTAAATGCATTTATTTTTAC+CGG | + | chr1.2:26684121-26684140 | MS.gene063213:intron | 15.0% |
!!! | TTTTGCATATAATGTAATTT+AGG | + | chr1.2:26683947-26683966 | MS.gene063213:intron | 15.0% |
!! | AAAATCATAAAGTTTGACAT+AGG | - | chr1.2:26684256-26684275 | None:intergenic | 20.0% |
!! | AAAGATGTTCCTAATATAAT+CGG | - | chr1.2:26684047-26684066 | None:intergenic | 20.0% |
!! | AATGTGTACGAAAATAATTA+TGG | - | chr1.2:26684557-26684576 | None:intergenic | 20.0% |
!! | ATGCATATTATTTAAACAAG+TGG | - | chr1.2:26685764-26685783 | None:intergenic | 20.0% |
!! | CATTAAATACTCAAACTATT+AGG | - | chr1.2:26683544-26683563 | None:intergenic | 20.0% |
!! | TAAAGGTAGAAAAATACAAA+CGG | + | chr1.2:26684155-26684174 | MS.gene063213:intron | 20.0% |
!! | TTAATTGAACTAAAGATTTG+GGG | - | chr1.2:26685135-26685154 | None:intergenic | 20.0% |
!! | TTATATATTATGTACCTGTA+TGG | - | chr1.2:26684358-26684377 | None:intergenic | 20.0% |
!! | TTCTTAAGATATGAATAATC+AGG | - | chr1.2:26685299-26685318 | None:intergenic | 20.0% |
!!! | AATTTTCAACAGATGAAATT+TGG | - | chr1.2:26685184-26685203 | None:intergenic | 20.0% |
!!! | ATATAAATCTTTAGTTTTGC+CGG | + | chr1.2:26684183-26684202 | MS.gene063213:intron | 20.0% |
!!! | ATCTAAAACATTGGAATTTA+GGG | - | chr1.2:26682732-26682751 | None:intergenic | 20.0% |
!!! | CATTTTCCAATTAGTATTTA+AGG | + | chr1.2:26682800-26682819 | MS.gene063213:intron | 20.0% |
!!! | GTTGAGTTATTTTATTGAAA+GGG | - | chr1.2:26683046-26683065 | None:intergenic | 20.0% |
!!! | TACCTTTATTTTTTGTTTTC+CGG | - | chr1.2:26684143-26684162 | None:intergenic | 20.0% |
!!! | TATCTAAAACATTGGAATTT+AGG | - | chr1.2:26682733-26682752 | None:intergenic | 20.0% |
!!! | TCTTTTTTCTACATTTTCAT+TGG | + | chr1.2:26683274-26683293 | MS.gene063213:intron | 20.0% |
!!! | TGTTATTTTAATTCTAGGAT+AGG | + | chr1.2:26685810-26685829 | MS.gene063213:intron | 20.0% |
!!! | TGTTGAGTTATTTTATTGAA+AGG | - | chr1.2:26683047-26683066 | None:intergenic | 20.0% |
!!! | TTCATTCTTGTATTTGAAAT+AGG | - | chr1.2:26684088-26684107 | None:intergenic | 20.0% |
!!! | TTTATAACTATCACAAGTTT+TGG | + | chr1.2:26685664-26685683 | MS.gene063213:intron | 20.0% |
!!! | TTTCACTATATCTAAAACAT+TGG | - | chr1.2:26682741-26682760 | None:intergenic | 20.0% |
! | AAACATGATGCAGAAAAATA+AGG | - | chr1.2:26685095-26685114 | None:intergenic | 25.0% |
! | AAAGATTGTATTTCACATGA+AGG | - | chr1.2:26683226-26683245 | None:intergenic | 25.0% |
! | AACATGATGCAGAAAAATAA+GGG | - | chr1.2:26685094-26685113 | None:intergenic | 25.0% |
! | AACTCAACATATTTACTTGT+CGG | + | chr1.2:26683058-26683077 | MS.gene063213:intron | 25.0% |
! | AGAAGAAATATGAATGGATA+AGG | + | chr1.2:26684989-26685008 | MS.gene063213:CDS | 25.0% |
! | AGCTTCTTGAAACTAAATAT+TGG | - | chr1.2:26685045-26685064 | None:intergenic | 25.0% |
! | AGTTGAAACAAAACGTATAA+AGG | - | chr1.2:26684491-26684510 | None:intergenic | 25.0% |
! | ATAAAGGGAACAAAATACAA+AGG | - | chr1.2:26684475-26684494 | None:intergenic | 25.0% |
! | ATATCTTAAGAAACTCTTTC+GGG | + | chr1.2:26685307-26685326 | MS.gene063213:CDS | 25.0% |
! | ATTGTGATCTTAAAACACAA+AGG | + | chr1.2:26684326-26684345 | MS.gene063213:CDS | 25.0% |
! | ATTTGATTGGACTAAATTGA+AGG | + | chr1.2:26685462-26685481 | MS.gene063213:CDS | 25.0% |
! | CATATCTTAAGAAACTCTTT+CGG | + | chr1.2:26685306-26685325 | MS.gene063213:CDS | 25.0% |
! | CTAAAGAGAAGAAATATGAA+TGG | + | chr1.2:26684983-26685002 | MS.gene063213:CDS | 25.0% |
! | GAAGAAATATGAATGGATAA+GGG | + | chr1.2:26684990-26685009 | MS.gene063213:CDS | 25.0% |
! | GGCAAAACTAAAGATTTATA+TGG | - | chr1.2:26684184-26684203 | None:intergenic | 25.0% |
! | GTTGAAACAAAACGTATAAA+GGG | - | chr1.2:26684490-26684509 | None:intergenic | 25.0% |
! | TACCGGAAAACAAAAAATAA+AGG | + | chr1.2:26684138-26684157 | MS.gene063213:intron | 25.0% |
! | TATAATCCCATCACTAAAAT+AGG | + | chr1.2:26684214-26684233 | MS.gene063213:intron | 25.0% |
! | TATGAAAAGAAGAGTAAAAG+AGG | - | chr1.2:26683249-26683268 | None:intergenic | 25.0% |
! | TGTATGAGTCTAAATTGTAT+AGG | + | chr1.2:26683336-26683355 | MS.gene063213:CDS | 25.0% |
! | TTAAATAAGTCTTCAAGACT+TGG | - | chr1.2:26683657-26683676 | None:intergenic | 25.0% |
! | TTTGGTCCTTAAATACTAAT+TGG | - | chr1.2:26682809-26682828 | None:intergenic | 25.0% |
!! | AGTTTGACTTTGTATTTGAT+TGG | + | chr1.2:26685449-26685468 | MS.gene063213:CDS | 25.0% |
!! | TGTACCATGATTTTAAATTG+CGG | + | chr1.2:26682618-26682637 | MS.gene063213:intron | 25.0% |
!! | TTTGCAAGAATTTTCAAATG+AGG | - | chr1.2:26685385-26685404 | None:intergenic | 25.0% |
!!! | AAGCATCAATACTGTTTTTA+AGG | - | chr1.2:26683700-26683719 | None:intergenic | 25.0% |
!!! | AATTTTGTTATAGTCTTCCA+TGG | + | chr1.2:26684935-26684954 | MS.gene063213:intron | 25.0% |
!!! | GATTTTCTTTTGATTATTGC+AGG | + | chr1.2:26684270-26684289 | MS.gene063213:intron | 25.0% |
!!! | GTTGGTGTTATTTTAATTCT+AGG | + | chr1.2:26685805-26685824 | MS.gene063213:intron | 25.0% |
!!! | TGCTAATTTTTATTTGAAGC+CGG | + | chr1.2:26683564-26683583 | MS.gene063213:intron | 25.0% |
AAATTGTATAGGCTTCTTCA+AGG | + | chr1.2:26683347-26683366 | MS.gene063213:CDS | 30.0% | |
AATGTATAATGACGAGTACA+AGG | - | chr1.2:26684900-26684919 | None:intergenic | 30.0% | |
ACTCAACATATTTACTTGTC+GGG | + | chr1.2:26683059-26683078 | MS.gene063213:intron | 30.0% | |
AGCTATACTTACTAGTTGAT+CGG | - | chr1.2:26683724-26683743 | None:intergenic | 30.0% | |
ATACCTCATATAAAGTGGTA+TGG | + | chr1.2:26683588-26683607 | MS.gene063213:CDS | 30.0% | |
CATATGAAGAGAGATTAGAA+CGG | + | chr1.2:26685633-26685652 | MS.gene063213:CDS | 30.0% | |
CCGCTTATTAACAAAATTGT+CGG | - | chr1.2:26683419-26683438 | None:intergenic | 30.0% | |
CTAAAGATTTGGGGATTAAA+AGG | - | chr1.2:26685126-26685145 | None:intergenic | 30.0% | |
CTAAATATTGGTACCTCTAT+TGG | - | chr1.2:26685033-26685052 | None:intergenic | 30.0% | |
TATATGATACACTGCAAAGT+TGG | + | chr1.2:26685787-26685806 | MS.gene063213:intron | 30.0% | |
TCTAGTTAAGATAGTACACA+TGG | - | chr1.2:26683813-26683832 | None:intergenic | 30.0% | |
TGTATAGGTATGATGTGTAT+GGG | - | chr1.2:26683014-26683033 | None:intergenic | 30.0% | |
TGTGATAGTTATAAACCTGT+AGG | - | chr1.2:26685659-26685678 | None:intergenic | 30.0% | |
TTTGAAAAGTCGTTGATCAT+AGG | + | chr1.2:26685835-26685854 | MS.gene063213:intron | 30.0% | |
TTTGCTTCATGCTAGAAATA+TGG | - | chr1.2:26683769-26683788 | None:intergenic | 30.0% | |
! | CCGACAATTTTGTTAATAAG+CGG | + | chr1.2:26683416-26683435 | MS.gene063213:intron | 30.0% |
! | TAGTTTCAAGAAGCTCTTTT+AGG | + | chr1.2:26685050-26685069 | MS.gene063213:intron | 30.0% |
!! | AGTTATTTTATTGAAAGGGC+AGG | - | chr1.2:26683042-26683061 | None:intergenic | 30.0% |
!! | GCATTTTCAGGAAGAAATAA+TGG | + | chr1.2:26685932-26685951 | MS.gene063213:intron | 30.0% |
!! | GTACTAATGTACTTTTTGAG+AGG | + | chr1.2:26684841-26684860 | MS.gene063213:CDS | 30.0% |
!! | TAATGTACTTTTTGAGAGGA+AGG | + | chr1.2:26684845-26684864 | MS.gene063213:CDS | 30.0% |
!! | TTTAAGACTGGTTTCACATT+TGG | - | chr1.2:26685605-26685624 | None:intergenic | 30.0% |
!!! | AACACAACCTATTTTAGTGA+TGG | - | chr1.2:26684224-26684243 | None:intergenic | 30.0% |
!!! | ACACAACCTATTTTAGTGAT+GGG | - | chr1.2:26684223-26684242 | None:intergenic | 30.0% |
!!! | GATCACAATACTTTTTTGCA+AGG | - | chr1.2:26684315-26684334 | None:intergenic | 30.0% |
AAAGAAGCTAACTCCAATAG+AGG | + | chr1.2:26685017-26685036 | MS.gene063213:CDS | 35.0% | |
AAATATGACGTGAACTCTGT+TGG | - | chr1.2:26685242-26685261 | None:intergenic | 35.0% | |
AAATTGAAGGATCCACAAAG+TGG | + | chr1.2:26685475-26685494 | MS.gene063213:CDS | 35.0% | |
ACCTGTTGTCCGATTATATT+AGG | + | chr1.2:26684035-26684054 | MS.gene063213:intron | 35.0% | |
ACTCCATACCACTTTATATG+AGG | - | chr1.2:26683594-26683613 | None:intergenic | 35.0% | |
AGGGAAAACAAGAATCTCAT+TGG | + | chr1.2:26684622-26684641 | MS.gene063213:intron | 35.0% | |
AGTACACATGGAAGGTAAAT+CGG | - | chr1.2:26683801-26683820 | None:intergenic | 35.0% | |
ATAGATTATGAGGTGAGGTT+GGG | + | chr1.2:26685909-26685928 | MS.gene063213:intron | 35.0% | |
ATTGGTGGAAAATTCAAGCT+TGG | + | chr1.2:26682298-26682317 | MS.gene063213:CDS | 35.0% | |
CAAAGTCAGACTCTACTATA+GGG | + | chr1.2:26682825-26682844 | MS.gene063213:intron | 35.0% | |
CAAAGTTCACATCGCAATTA+CGG | - | chr1.2:26682706-26682725 | None:intergenic | 35.0% | |
CGTTCTAATCTCTCTTCATA+TGG | - | chr1.2:26685635-26685654 | None:intergenic | 35.0% | |
CTAAAATATTGCTGATGTGG+TGG | + | chr1.2:26682660-26682679 | MS.gene063213:intron | 35.0% | |
GAGATTCGAGATAGATTATG+AGG | + | chr1.2:26685899-26685918 | MS.gene063213:intron | 35.0% | |
GTCACTCCAATTTCTATGTA+GGG | + | chr1.2:26682508-26682527 | MS.gene063213:intron | 35.0% | |
GTGTATAGGTATGATGTGTA+TGG | - | chr1.2:26683015-26683034 | None:intergenic | 35.0% | |
GTTAAGATAGTACACATGGA+AGG | - | chr1.2:26683809-26683828 | None:intergenic | 35.0% | |
TCCTAATATAATCGGACAAC+AGG | - | chr1.2:26684039-26684058 | None:intergenic | 35.0% | |
TGAACCCATTAGAAAGTTCT+CGG | - | chr1.2:26683890-26683909 | None:intergenic | 35.0% | |
TGTCACTCCAATTTCTATGT+AGG | + | chr1.2:26682507-26682526 | MS.gene063213:intron | 35.0% | |
TGTTGATGTGAAAACTCAAG+AGG | + | chr1.2:26682443-26682462 | MS.gene063213:CDS | 35.0% | |
TTAGACTCATACAGAAGTTG+AGG | - | chr1.2:26683329-26683348 | None:intergenic | 35.0% | |
TTTAACACTCACCTTGGAAT+TGG | + | chr1.2:26684664-26684683 | MS.gene063213:CDS | 35.0% | |
! | ATTATAAATGGCGCTTTTGC+AGG | + | chr1.2:26685421-26685440 | MS.gene063213:intron | 35.0% |
! | ATTTGGGACTTGTTTGTTTC+AGG | + | chr1.2:26682420-26682439 | MS.gene063213:intron | 35.0% |
! | CAGGTGTACATTATTGACTA+TGG | + | chr1.2:26684289-26684308 | MS.gene063213:intron | 35.0% |
! | CCATGATTTTAAATTGCGGT+CGG | + | chr1.2:26682622-26682641 | MS.gene063213:intron | 35.0% |
! | CGTCTAAAATATTGCTGATG+TGG | + | chr1.2:26682657-26682676 | MS.gene063213:intron | 35.0% |
! | TACATTTTCATTGGCATCTC+AGG | + | chr1.2:26683283-26683302 | MS.gene063213:intron | 35.0% |
! | TTAAATTGCGGTTCTAGTCA+CGG | - | chr1.2:26682977-26682996 | None:intergenic | 35.0% |
!!! | ACTCACACTTGTTTTAGAAC+TGG | - | chr1.2:26685503-26685522 | None:intergenic | 35.0% |
AAAGCCCGAGAACTTTCTAA+TGG | + | chr1.2:26683882-26683901 | MS.gene063213:CDS | 40.0% | |
AAGCCCGAGAACTTTCTAAT+GGG | + | chr1.2:26683883-26683902 | MS.gene063213:CDS | 40.0% | |
ACTGGTGAGTGAAGTTGTTA+TGG | + | chr1.2:26682479-26682498 | MS.gene063213:intron | 40.0% | |
ATAAAGTGGTATGGAGTCGA+GGG | + | chr1.2:26683597-26683616 | MS.gene063213:CDS | 40.0% | |
ATATCTGTGCTCTAGCATAG+TGG | + | chr1.2:26683441-26683460 | MS.gene063213:intron | 40.0% | |
ATGGGATTATACAATGTCGC+CGG | - | chr1.2:26684205-26684224 | None:intergenic | 40.0% | |
ATTTAGGCACGTATCTGCTA+AGG | + | chr1.2:26683963-26683982 | MS.gene063213:intron | 40.0% | |
CAGGAAGAAATAATGGCTCT+GGG | + | chr1.2:26685939-26685958 | MS.gene063213:intron | 40.0% | |
CCAAAGTCAGACTCTACTAT+AGG | + | chr1.2:26682824-26682843 | MS.gene063213:intron | 40.0% | |
CCACTTTATATGAGGTATGC+CGG | - | chr1.2:26683586-26683605 | None:intergenic | 40.0% | |
CCTATAGTAGAGTCTGACTT+TGG | - | chr1.2:26682827-26682846 | None:intergenic | 40.0% | |
CGGGAACTATTCATTAGAGA+AGG | + | chr1.2:26685326-26685345 | MS.gene063213:CDS | 40.0% | |
CTAGTGACAGATGTAAGTCA+TGG | - | chr1.2:26683996-26684015 | None:intergenic | 40.0% | |
GAACCCATTAGAAAGTTCTC+GGG | - | chr1.2:26683889-26683908 | None:intergenic | 40.0% | |
GATAGATTATGAGGTGAGGT+TGG | + | chr1.2:26685908-26685927 | MS.gene063213:intron | 40.0% | |
GCACGTAGTTGGACAAAATA+TGG | + | chr1.2:26682579-26682598 | MS.gene063213:intron | 40.0% | |
GTGAAACCAGTCTTAAACAC+AGG | + | chr1.2:26685608-26685627 | MS.gene063213:CDS | 40.0% | |
GTGACTAGAACCGCAATTTA+AGG | + | chr1.2:26682976-26682995 | MS.gene063213:intron | 40.0% | |
GTTATAGTCTTCCATGGCAT+GGG | + | chr1.2:26684941-26684960 | MS.gene063213:intron | 40.0% | |
TAGATTATGAGGTGAGGTTG+GGG | + | chr1.2:26685910-26685929 | MS.gene063213:intron | 40.0% | |
TATAAAGTGGTATGGAGTCG+AGG | + | chr1.2:26683596-26683615 | MS.gene063213:CDS | 40.0% | |
TCAGGAAGAAATAATGGCTC+TGG | + | chr1.2:26685938-26685957 | MS.gene063213:intron | 40.0% | |
TCCACTATTGTCGATCATTG+CGG | + | chr1.2:26685261-26685280 | MS.gene063213:CDS | 40.0% | |
TCGAGATAGATTATGAGGTG+AGG | + | chr1.2:26685904-26685923 | MS.gene063213:intron | 40.0% | |
TGCACAACTTACCAATTCCA+AGG | - | chr1.2:26684678-26684697 | None:intergenic | 40.0% | |
TGTGAAAACTCAAGAGGAAG+TGG | + | chr1.2:26682449-26682468 | MS.gene063213:CDS | 40.0% | |
TGTTATAGTCTTCCATGGCA+TGG | + | chr1.2:26684940-26684959 | MS.gene063213:intron | 40.0% | |
TTAGAACTGGAACCACTTTG+TGG | - | chr1.2:26685490-26685509 | None:intergenic | 40.0% | |
TTCAGGCAGCAAGATAAATC+AGG | + | chr1.2:26683906-26683925 | MS.gene063213:CDS | 40.0% | |
TTCCACTGATGTTGCATGAA+TGG | + | chr1.2:26684578-26684597 | MS.gene063213:intron | 40.0% | |
TTGTATAGGCTTCTTCAAGG+AGG | + | chr1.2:26683350-26683369 | MS.gene063213:CDS | 40.0% | |
! | AGAGATGATCTAGAATCGCT+TGG | + | chr1.2:26684814-26684833 | MS.gene063213:CDS | 40.0% |
! | AGGAAGAAATAATGGCTCTG+GGG | + | chr1.2:26685940-26685959 | MS.gene063213:intron | 40.0% |
! | ATTTTGTCCAACTACGTGCA+AGG | - | chr1.2:26682578-26682597 | None:intergenic | 40.0% |
! | CCGACCGCAATTTAAAATCA+TGG | - | chr1.2:26682625-26682644 | None:intergenic | 40.0% |
! | GCACTGTTTTACTCTCAACA+GGG | + | chr1.2:26684603-26684622 | MS.gene063213:intron | 40.0% |
! | TACCTGTTCAGCTTCTTTTC+AGG | + | chr1.2:26683390-26683409 | MS.gene063213:intron | 40.0% |
! | TATGGTCCTGTGTTTAAGAC+TGG | - | chr1.2:26685617-26685636 | None:intergenic | 40.0% |
! | TGCACTGTTTTACTCTCAAC+AGG | + | chr1.2:26684602-26684621 | MS.gene063213:intron | 40.0% |
! | TTTTGTCCAACTACGTGCAA+GGG | - | chr1.2:26682577-26682596 | None:intergenic | 40.0% |
!! | AGCATTTGGGGAGCTTTATT+TGG | + | chr1.2:26682339-26682358 | MS.gene063213:CDS | 40.0% |
!! | GAGAACTTTCTAATGGGTTC+AGG | + | chr1.2:26683889-26683908 | MS.gene063213:CDS | 40.0% |
!! | GCAAGTTTTAACACTCACCT+TGG | + | chr1.2:26684658-26684677 | MS.gene063213:CDS | 40.0% |
!! | GCATTTGGGGAGCTTTATTT+GGG | + | chr1.2:26682340-26682359 | MS.gene063213:CDS | 40.0% |
!! | GTACTTTTTGAGAGGAAGGT+TGG | + | chr1.2:26684849-26684868 | MS.gene063213:intron | 40.0% |
!! | TTTTTGAGAGGAAGGTTGGT+TGG | + | chr1.2:26684853-26684872 | MS.gene063213:intron | 40.0% |
AAAGGGCAGGTGATGTGTAT+AGG | - | chr1.2:26683029-26683048 | None:intergenic | 45.0% | |
ACCGCAATGATCGACAATAG+TGG | - | chr1.2:26685265-26685284 | None:intergenic | 45.0% | |
AGAGGAAGTGGCTCTTAAAC+TGG | + | chr1.2:26682461-26682480 | MS.gene063213:CDS | 45.0% | |
AGCCATTCATGCAACATCAG+TGG | - | chr1.2:26684583-26684602 | None:intergenic | 45.0% | |
ATGTGTATGGGTACGAGTCA+TGG | - | chr1.2:26683002-26683021 | None:intergenic | 45.0% | |
CCGGCATACCTCATATAAAG+TGG | + | chr1.2:26683583-26683602 | MS.gene063213:CDS | 45.0% | |
CGGCATCCCTACATAGAAAT+TGG | - | chr1.2:26682517-26682536 | None:intergenic | 45.0% | |
GTAGCGTATATGCACTATCG+TGG | + | chr1.2:26683841-26683860 | MS.gene063213:CDS | 45.0% | |
TCAAGCTTGGCAGCAAACTT+GGG | + | chr1.2:26682311-26682330 | MS.gene063213:CDS | 45.0% | |
TCTACCAAAACCCTACCCAT+CGG | - | chr1.2:26682537-26682556 | None:intergenic | 45.0% | |
TGCCTGAAAAGAAGCTGAAC+AGG | - | chr1.2:26683395-26683414 | None:intergenic | 45.0% | |
TTCAAGCTTGGCAGCAAACT+TGG | + | chr1.2:26682310-26682329 | MS.gene063213:CDS | 45.0% | |
TTCTATGTAGGGATGCCGAT+GGG | + | chr1.2:26682519-26682538 | MS.gene063213:intron | 45.0% | |
TTTCTATGTAGGGATGCCGA+TGG | + | chr1.2:26682518-26682537 | MS.gene063213:intron | 45.0% | |
TTTGTCCAACTACGTGCAAG+GGG | - | chr1.2:26682576-26682595 | None:intergenic | 45.0% | |
! | AAACTTGGGAGTGGAGCATT+TGG | + | chr1.2:26682325-26682344 | MS.gene063213:CDS | 45.0% |
! | AACTTGGGAGTGGAGCATTT+GGG | + | chr1.2:26682326-26682345 | MS.gene063213:CDS | 45.0% |
! | ACATCTGAAGGTGCATACGA+CGG | - | chr1.2:26685995-26686014 | None:intergenic | 45.0% |
! | CACAAAGGCACATACCATAC+AGG | + | chr1.2:26684341-26684360 | MS.gene063213:CDS | 45.0% |
! | CGAGTCATGGCCTTAAATTG+CGG | - | chr1.2:26682989-26683008 | None:intergenic | 45.0% |
! | CTTCAAGACTTGGTCCAAGA+AGG | - | chr1.2:26683647-26683666 | None:intergenic | 45.0% |
!! | TACAAAATATTATTATATAT+CGG | + | chr1.2:26683504-26683523 | MS.gene063213:intron | 5.0% |
CACTGATGCGACTCGCATTA+AGG | - | chr1.2:26682927-26682946 | None:intergenic | 50.0% | |
CAGACTGCAGCATAGGTCTT+TGG | + | chr1.2:26685964-26685983 | MS.gene063213:CDS | 50.0% | |
CGAGGGTGACTACAATGTGA+TGG | + | chr1.2:26683614-26683633 | MS.gene063213:CDS | 50.0% | |
GAGAGATTAGAACGGCCTAC+AGG | + | chr1.2:26685641-26685660 | MS.gene063213:CDS | 50.0% | |
GTGATGGCTGTTGACCTTCT+TGG | + | chr1.2:26683630-26683649 | MS.gene063213:CDS | 50.0% | |
TCGCAATTACGGTGCCTTTG+CGG | - | chr1.2:26682695-26682714 | None:intergenic | 50.0% | |
! | ACTTGGGAGTGGAGCATTTG+GGG | + | chr1.2:26682327-26682346 | MS.gene063213:CDS | 50.0% |
AGTCTTCCATGGCATGGGCA+CGG | + | chr1.2:26684946-26684965 | MS.gene063213:intron | 55.0% | |
ATGTAGGGATGCCGATGGGT+AGG | + | chr1.2:26682523-26682542 | MS.gene063213:intron | 55.0% | |
CTTGGCAGCAAACTTGGGAG+TGG | + | chr1.2:26682316-26682335 | MS.gene063213:CDS | 55.0% | |
TCTGTCCCCTTGCACGTAGT+TGG | + | chr1.2:26682568-26682587 | MS.gene063213:intron | 55.0% | |
TGTAGGGATGCCGATGGGTA+GGG | + | chr1.2:26682524-26682543 | MS.gene063213:intron | 55.0% | |
TTACGGTGCCTTTGCGGTTG+CGG | - | chr1.2:26682689-26682708 | None:intergenic | 55.0% | |
! | GATGCCGATGGGTAGGGTTT+TGG | + | chr1.2:26682530-26682549 | MS.gene063213:intron | 55.0% |
!! | GGTGAGGTTGGGGCATTTTC+AGG | + | chr1.2:26685920-26685939 | MS.gene063213:intron | 55.0% |
CTACGTGCAAGGGGACAGAC+AGG | - | chr1.2:26682567-26682586 | None:intergenic | 60.0% | |
CTGGGGACAGACTGCAGCAT+AGG | + | chr1.2:26685957-26685976 | MS.gene063213:CDS | 60.0% | |
TTCATGCCGTGCCCATGCCA+TGG | - | chr1.2:26684955-26684974 | None:intergenic | 60.0% | |
CGGTGCCTTTGCGGTTGCGG+TGG | - | chr1.2:26682686-26682705 | None:intergenic | 70.0% | |
GGTGGCCACCGCAACCGCAA+AGG | + | chr1.2:26682678-26682697 | MS.gene063213:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 26682286 | 26686024 | 26682286 | ID=MS.gene063213 |
chr1.2 | mRNA | 26682286 | 26686024 | 26682286 | ID=MS.gene063213.t1;Parent=MS.gene063213 |
chr1.2 | exon | 26682286 | 26682361 | 26682286 | ID=MS.gene063213.t1.exon1;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26682286 | 26682361 | 26682286 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26682442 | 26682482 | 26682442 | ID=MS.gene063213.t1.exon2;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26682442 | 26682482 | 26682442 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26683305 | 26683374 | 26683305 | ID=MS.gene063213.t1.exon3;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26683305 | 26683374 | 26683305 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26683583 | 26683731 | 26683583 | ID=MS.gene063213.t1.exon4;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26683583 | 26683731 | 26683583 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26683832 | 26683927 | 26683832 | ID=MS.gene063213.t1.exon5;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26683832 | 26683927 | 26683832 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26684292 | 26684362 | 26684292 | ID=MS.gene063213.t1.exon6;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26684292 | 26684362 | 26684292 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26684624 | 26684685 | 26684624 | ID=MS.gene063213.t1.exon7;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26684624 | 26684685 | 26684624 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26684803 | 26684866 | 26684803 | ID=MS.gene063213.t1.exon8;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26684803 | 26684866 | 26684803 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26684948 | 26685038 | 26684948 | ID=MS.gene063213.t1.exon9;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26684948 | 26685038 | 26684948 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26685221 | 26685347 | 26685221 | ID=MS.gene063213.t1.exon10;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26685221 | 26685347 | 26685221 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26685443 | 26685516 | 26685443 | ID=MS.gene063213.t1.exon11;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26685443 | 26685516 | 26685443 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26685602 | 26685662 | 26685602 | ID=MS.gene063213.t1.exon12;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26685602 | 26685662 | 26685602 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
chr1.2 | exon | 26685942 | 26686024 | 26685942 | ID=MS.gene063213.t1.exon13;Parent=MS.gene063213.t1 |
chr1.2 | CDS | 26685942 | 26686024 | 26685942 | ID=cds.MS.gene063213.t1;Parent=MS.gene063213.t1 |
Gene Sequence |
Protein sequence |