AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene063284

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063284.t1 MTR_1g047060 53.000 100 38 3 110 207 1 93 4.65e-26 97.8
MS.gene063284.t1 MTR_5g012080 32.704 159 82 8 4 146 7 156 3.55e-16 77.0
MS.gene063284.t1 MTR_1g096430 32.484 157 89 6 4 149 7 157 1.00e-15 75.9
MS.gene063284.t1 MTR_2g080010 33.544 158 93 5 4 155 15 166 1.82e-15 75.1
MS.gene063284.t1 MTR_4g094302 29.747 158 87 6 4 147 11 158 4.26e-15 71.6
MS.gene063284.t1 MTR_4g089135 35.075 134 76 4 4 132 15 142 3.04e-14 71.6
MS.gene063284.t1 MTR_4g094302 32.558 129 78 4 4 132 11 130 3.08e-14 68.6
MS.gene063284.t1 MTR_1g008740 32.484 157 88 6 2 146 25 175 6.83e-14 70.9
MS.gene063284.t1 MTR_7g100990 32.075 159 84 6 4 145 11 162 8.30e-14 70.1
MS.gene063284.t1 MTR_1g008740 32.484 157 88 6 2 146 11 161 8.60e-14 70.5
MS.gene063284.t1 MTR_2g064090 31.646 158 85 8 4 146 6 155 8.77e-14 70.1
MS.gene063284.t1 MTR_7g105170 31.138 167 89 8 1 146 1 162 1.31e-13 68.9
MS.gene063284.t1 MTR_2g093810 30.380 158 88 5 4 145 14 165 2.13e-13 68.9
MS.gene063284.t1 MTR_7g097090 33.333 153 84 7 4 146 10 154 4.24e-13 67.8
MS.gene063284.t1 MTR_8g076110 31.818 154 88 6 4 146 6 153 4.78e-13 67.8
MS.gene063284.t1 MTR_3g096140 27.835 194 115 7 2 179 5 189 4.97e-13 67.4
MS.gene063284.t1 MTR_4g035590 30.460 174 99 9 4 164 8 172 6.26e-13 67.8
MS.gene063284.t1 MTR_3g093040 31.481 162 79 10 4 146 108 256 7.50e-13 67.4
MS.gene063284.t1 MTR_8g093790 28.758 153 75 6 4 147 10 137 8.20e-13 65.5
MS.gene063284.t1 MTR_5g040420 27.711 166 92 6 2 146 12 170 8.91e-13 67.4
MS.gene063284.t1 MTR_8g023900 29.677 155 88 7 4 145 12 158 1.26e-12 67.4
MS.gene063284.t1 MTR_8g023900 29.545 176 99 8 7 168 196 360 3.07e-12 66.2
MS.gene063284.t1 MTR_3g096140 27.835 194 115 7 2 179 5 189 1.49e-12 66.6
MS.gene063284.t1 MTR_8g059170 31.210 157 86 6 4 146 14 162 1.67e-12 66.6
MS.gene063284.t1 MTR_8g467490 27.711 166 93 6 2 146 12 171 2.56e-12 66.2
MS.gene063284.t1 MTR_2g079990 30.128 156 87 6 4 146 16 162 7.30e-12 64.7
MS.gene063284.t1 MTR_3g093050 32.099 162 78 10 4 146 22 170 7.39e-12 65.1
MS.gene063284.t1 MTR_3g093050 32.099 162 78 10 4 146 22 170 1.23e-11 64.3
MS.gene063284.t1 MTR_6g012670 28.144 167 97 7 4 154 20 179 1.90e-11 63.2
MS.gene063284.t1 MTR_3g096400 28.743 167 83 6 4 147 7 160 4.73e-11 60.8
MS.gene063284.t1 MTR_1g090720 31.902 163 83 7 4 146 42 196 5.24e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene063284.t1 AT2G24430 35.669 157 82 6 2 146 14 163 8.41e-17 78.6
MS.gene063284.t1 AT2G24430 35.669 157 82 6 2 146 14 163 8.41e-17 78.6
MS.gene063284.t1 AT2G27300 28.230 209 124 8 4 197 14 211 3.36e-16 77.0
MS.gene063284.t1 AT4G36160 32.278 158 90 6 4 150 14 165 5.12e-16 77.0
MS.gene063284.t1 AT4G36160 32.278 158 90 6 4 150 10 161 5.48e-16 77.0
MS.gene063284.t1 AT4G36160 32.278 158 90 6 4 150 10 161 5.48e-16 77.0
MS.gene063284.t1 AT1G71930 31.210 157 91 5 4 149 9 159 5.88e-15 73.6
MS.gene063284.t1 AT1G71930 31.210 157 91 5 4 149 9 159 5.88e-15 73.6
MS.gene063284.t1 AT5G64530 29.319 191 99 6 4 171 3 180 6.89e-15 71.2
MS.gene063284.t1 AT5G39610 32.903 155 86 6 4 146 20 168 1.12e-14 72.4
MS.gene063284.t1 AT1G76420 32.075 159 83 6 4 147 22 170 1.14e-14 72.8
MS.gene063284.t1 AT1G01720 31.056 161 84 6 4 147 7 157 1.42e-14 72.0
MS.gene063284.t1 AT1G26870 31.169 154 93 4 2 149 14 160 1.93e-14 72.4
MS.gene063284.t1 AT5G22290 27.835 194 109 8 6 179 23 205 2.38e-14 72.0
MS.gene063284.t1 AT4G17980 31.646 158 86 6 4 145 6 157 3.36e-14 70.5
MS.gene063284.t1 AT3G44290 27.517 149 88 6 6 145 16 153 5.13e-14 69.7
MS.gene063284.t1 AT4G17980 31.646 158 86 6 4 145 6 157 5.14e-14 70.5
MS.gene063284.t1 AT3G15500 32.484 157 82 8 4 146 14 160 1.16e-13 69.7
MS.gene063284.t1 AT3G44290 27.517 149 88 6 6 145 16 153 1.33e-13 69.7
MS.gene063284.t1 AT5G64530 33.588 131 74 4 4 134 3 120 1.60e-13 66.6
MS.gene063284.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.00e-13 69.7
MS.gene063284.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.13e-13 69.7
MS.gene063284.t1 AT4G35580 30.675 163 91 8 1 149 6 160 2.17e-13 69.7
MS.gene063284.t1 AT3G29035 30.968 155 89 5 4 146 24 172 2.50e-13 68.9
MS.gene063284.t1 AT4G10350 30.387 181 94 10 4 168 9 173 2.67e-13 68.9
MS.gene063284.t1 AT1G52890 32.278 158 81 8 4 146 14 160 3.19e-13 68.6
MS.gene063284.t1 AT5G17260 31.013 158 86 7 4 146 6 155 3.27e-13 68.9
MS.gene063284.t1 AT5G63790 32.099 162 82 7 4 147 50 201 4.94e-13 67.8
MS.gene063284.t1 AT5G63790 32.099 162 82 7 4 147 60 211 5.42e-13 67.8
MS.gene063284.t1 AT1G54330 31.373 153 88 6 4 146 6 151 5.82e-13 67.8
MS.gene063284.t1 AT4G27410 30.128 156 87 6 4 146 14 160 2.34e-12 65.9
MS.gene063284.t1 AT1G32510 29.268 164 88 7 3 145 5 161 4.78e-12 64.7
MS.gene063284.t1 AT3G15510 31.579 152 92 5 10 155 23 168 5.74e-12 65.1
MS.gene063284.t1 AT5G13180 28.947 152 92 5 4 146 14 158 5.92e-12 64.3
MS.gene063284.t1 AT3G03200 31.013 158 86 7 4 146 6 155 6.42e-12 65.1
MS.gene063284.t1 AT5G46590 30.625 160 83 8 4 145 6 155 7.10e-12 64.3
MS.gene063284.t1 AT2G43000 28.289 152 92 5 6 146 20 165 1.12e-11 63.5

Find 52 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTATGCTTTCAATTA+TGG 0.116873 1.4:-3986917 MS.gene063284:CDS
CAATGGTTCTGACCTGATTC+AGG 0.237830 1.4:-3988101 MS.gene063284:CDS
GGCACTGTAAGACGGGATTT+TGG 0.238007 1.4:-3987967 MS.gene063284:CDS
CCTTGGGTGACGGAAGAAAA+AGG 0.350861 1.4:+3988030 None:intergenic
TTGGATCTGGATGCTGAGTT+TGG 0.378607 1.4:-3987638 MS.gene063284:CDS
ATTGAAAGCATAATTTGCTC+AGG 0.423054 1.4:+3986922 None:intergenic
ACAGGTTCAGCTCCTGAATC+AGG 0.430846 1.4:+3988089 None:intergenic
ACTCCATTCGTCTTGTCAGC+AGG 0.440817 1.4:+3987578 None:intergenic
CCTCCTCTGCTCATCAACTT+TGG 0.455099 1.4:+3987988 None:intergenic
GAAGAGGCTCAGAATTTCAA+TGG 0.469135 1.4:-3988118 MS.gene063284:CDS
GCAATTCAAACGGATCATAC+TGG 0.470273 1.4:+3988065 None:intergenic
TGGAGTTACTAAGAAACCTA+TGG 0.475930 1.4:-3987561 MS.gene063284:CDS
GTTGATGAAGGCGATGCTGC+TGG 0.479728 1.4:-3987608 MS.gene063284:CDS
GTGAAGCAGCAAAATTCCCT+TGG 0.487125 1.4:+3988013 None:intergenic
CTGCCCACCAGAGTTGGATC+TGG 0.490020 1.4:-3987651 MS.gene063284:CDS
CAGAGGAGGCACTGTAAGAC+GGG 0.502638 1.4:-3987974 MS.gene063284:CDS
GGAGTAAAACGCAATTCAAA+CGG 0.503611 1.4:+3988055 None:intergenic
AGCAAAATTCCCTTGGGTGA+CGG 0.508819 1.4:+3988020 None:intergenic
ACTAGTGCTGCTGCTGAGCA+AGG 0.517825 1.4:-3987518 MS.gene063284:CDS
CAAACGGATCATACTGGTAC+AGG 0.523566 1.4:+3988071 None:intergenic
TTTGGAGCTATAGTTGATGA+AGG 0.531036 1.4:-3987620 MS.gene063284:CDS
AGAATGCCATCAAAACTAGC+TGG 0.534697 1.4:-3987847 MS.gene063284:CDS
GGAGTTACTAAGAAACCTAT+GGG 0.538296 1.4:-3987560 MS.gene063284:CDS
GCTGTTCGAGACATTACTGT+TGG 0.540803 1.4:-3987932 MS.gene063284:CDS
CACACTTGCTAACAATCCTC+AGG 0.550460 1.4:-3987810 MS.gene063284:intron
TTGAAAGCATAATTTGCTCA+GGG 0.552658 1.4:+3986923 None:intergenic
CTCCATTCGTCTTGTCAGCA+GGG 0.558272 1.4:+3987579 None:intergenic
TGAAGCAGCAAAATTCCCTT+GGG 0.560910 1.4:+3988014 None:intergenic
TGGCAAGGTAGTGGCTAACA+AGG 0.563537 1.4:+3988152 None:intergenic
AAAACAAATAAATTTATACA+AGG 0.565586 1.4:+3986869 None:intergenic
GCATCCAGATCCAACTCTGG+TGG 0.565861 1.4:+3987647 None:intergenic
GTTTGACTGCCCACCAGAGT+TGG 0.567918 1.4:-3987657 MS.gene063284:CDS
CTAACAAGGAGCTCATCAGA+AGG 0.575725 1.4:+3988166 None:intergenic
TGACTATGCTGTCTTGCACA+TGG 0.580894 1.4:-3986956 MS.gene063284:CDS
CCAAAGTTGATGAGCAGAGG+AGG 0.581145 1.4:-3987988 MS.gene063284:CDS
TAACAAGGAGCTCATCAGAA+GGG 0.587558 1.4:+3988167 None:intergenic
AGTGCTGCTGCTGAGCAAGG+CGG 0.590822 1.4:-3987515 MS.gene063284:CDS
GCAGAGGAGGCACTGTAAGA+CGG 0.596785 1.4:-3987975 MS.gene063284:CDS
GACCCTGCTGACAAGACGAA+TGG 0.596809 1.4:-3987581 MS.gene063284:CDS
TCAGCATCCAGATCCAACTC+TGG 0.601777 1.4:+3987644 None:intergenic
GCAATGGAATTGCTTCCACC+TGG 0.606391 1.4:-3988202 MS.gene063284:CDS
AACAAGGAGCTCATCAGAAG+GGG 0.621007 1.4:+3988168 None:intergenic
CTGCCAAAGTTGATGAGCAG+AGG 0.624165 1.4:-3987991 MS.gene063284:CDS
CATCCAGATCCAACTCTGGT+GGG 0.645528 1.4:+3987648 None:intergenic
TGGAACTGATAACATGTTGG+TGG 0.647517 1.4:-3987912 MS.gene063284:CDS
TGTTGGAACTGATAACATGT+TGG 0.651961 1.4:-3987915 MS.gene063284:CDS
GAAGGGGCGAAGTCAACACC+AGG 0.655180 1.4:+3988184 None:intergenic
GGGGCGAAGTCAACACCAGG+TGG 0.667873 1.4:+3988187 None:intergenic
TGAAAGCATAATTTGCTCAG+GGG 0.670703 1.4:+3986924 None:intergenic
GGAACTGATAACATGTTGGT+GGG 0.673386 1.4:-3987911 MS.gene063284:CDS
GAGTTACTAAGAAACCTATG+GGG 0.689164 1.4:-3987559 MS.gene063284:CDS
AGTTACTAAGAAACCTATGG+GGG 0.728442 1.4:-3987558 MS.gene063284:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAATGAAATGAAAATT+TGG + chr1.4:3988023-3988042 None:intergenic 10.0%
!!! TATTTTAAAAATTATTATGC+AGG - chr1.4:3987379-3987398 MS.gene063284:intron 10.0%
!! CGTTAACTAATAAAAAAAAA+AGG + chr1.4:3987891-3987910 None:intergenic 15.0%
!! AATATAAAGAGAGATCAAAA+TGG + chr1.4:3987641-3987660 None:intergenic 20.0%
!! ATAAGATCAACAACATTAAT+TGG + chr1.4:3987666-3987685 None:intergenic 20.0%
!! TCAAGGATTAATTAATGTAT+TGG - chr1.4:3987338-3987357 MS.gene063284:intron 20.0%
!!! ATTTTATAATGAAGACAAGA+AGG - chr1.4:3988035-3988054 MS.gene063284:CDS 20.0%
!!! TCTCTTTTTATGTTCTATAT+AGG - chr1.4:3987200-3987219 MS.gene063284:intron 20.0%
! AAAAAATACCATCACATGAA+TGG + chr1.4:3987732-3987751 None:intergenic 25.0%
! CTCTGTTCATTATTTAATCA+AGG - chr1.4:3987321-3987340 MS.gene063284:intron 25.0%
! CTTGATTAAATAATGAACAG+AGG + chr1.4:3987323-3987342 None:intergenic 25.0%
! GCAAATTATGCTTTCAATTA+TGG - chr1.4:3988164-3988183 MS.gene063284:CDS 25.0%
!!! TGAATTGCTTTGTTTGTTTT+TGG - chr1.4:3988072-3988091 MS.gene063284:CDS 25.0%
! TCAAATGTCACAGATTTTGA+AGG - chr1.4:3987593-3987612 MS.gene063284:CDS 30.0%
!! ATTGAAAGCATAATTTGCTC+AGG + chr1.4:3988162-3988181 None:intergenic 30.0%
!! TTGAAAGCATAATTTGCTCA+GGG + chr1.4:3988161-3988180 None:intergenic 30.0%
!!! GTTTGTTTTTGGTGTTTATC+AGG - chr1.4:3988083-3988102 MS.gene063284:CDS 30.0%
AACTCAATCCATTCATGTGA+TGG - chr1.4:3987721-3987740 MS.gene063284:intron 35.0%
ACATTCAGTAGCAAAGATTG+AGG + chr1.4:3987760-3987779 None:intergenic 35.0%
AGTTACTAAGAAACCTATGG+GGG - chr1.4:3987523-3987542 MS.gene063284:CDS 35.0%
ATGACGTGATTTGAAGAATC+TGG + chr1.4:3987926-3987945 None:intergenic 35.0%
GAGTTACTAAGAAACCTATG+GGG - chr1.4:3987522-3987541 MS.gene063284:CDS 35.0%
GGAGTAAAACGCAATTCAAA+CGG + chr1.4:3987029-3987048 None:intergenic 35.0%
GGAGTTACTAAGAAACCTAT+GGG - chr1.4:3987521-3987540 MS.gene063284:CDS 35.0%
TGCCAACAAAAACAATGAAG+AGG - chr1.4:3986947-3986966 MS.gene063284:CDS 35.0%
TGGAGTTACTAAGAAACCTA+TGG - chr1.4:3987520-3987539 MS.gene063284:CDS 35.0%
TGTTGGAACTGATAACATGT+TGG - chr1.4:3987166-3987185 MS.gene063284:intron 35.0%
!! TGAAAGCATAATTTGCTCAG+GGG + chr1.4:3988160-3988179 None:intergenic 35.0%
!! TTTGGAGCTATAGTTGATGA+AGG - chr1.4:3987461-3987480 MS.gene063284:intron 35.0%
!!! AGCCTCTTCATTGTTTTTGT+TGG + chr1.4:3986952-3986971 None:intergenic 35.0%
!!! CTTCATTGTTTTTGTTGGCA+AGG + chr1.4:3986947-3986966 None:intergenic 35.0%
AGAATGCCATCAAAACTAGC+TGG - chr1.4:3987234-3987253 MS.gene063284:intron 40.0%
GAAGAGGCTCAGAATTTCAA+TGG - chr1.4:3986963-3986982 MS.gene063284:CDS 40.0%
GCAATTCAAACGGATCATAC+TGG + chr1.4:3987019-3987038 None:intergenic 40.0%
GGAACTGATAACATGTTGGT+GGG - chr1.4:3987170-3987189 MS.gene063284:intron 40.0%
TAACAAGGAGCTCATCAGAA+GGG + chr1.4:3986917-3986936 None:intergenic 40.0%
TGAAGCAGCAAAATTCCCTT+GGG + chr1.4:3987070-3987089 None:intergenic 40.0%
TGGAACTGATAACATGTTGG+TGG - chr1.4:3987169-3987188 MS.gene063284:intron 40.0%
TTGCTAACAATCCTCAGGTA+TGG - chr1.4:3987276-3987295 MS.gene063284:intron 40.0%
! ACGGGATTTTGGATGCAAAA+GGG - chr1.4:3987125-3987144 MS.gene063284:intron 40.0%
!! AGTTTTGATGGCATTCTGAG+CGG + chr1.4:3987231-3987250 None:intergenic 40.0%
!! TGTTTTTGTTGGCAAGGTAG+TGG + chr1.4:3986941-3986960 None:intergenic 40.0%
!!! CATAGTCCAGCTAGTTTTGA+TGG + chr1.4:3987243-3987262 None:intergenic 40.0%
AACAAGGAGCTCATCAGAAG+GGG + chr1.4:3986916-3986935 None:intergenic 45.0%
AGCAAAATTCCCTTGGGTGA+CGG + chr1.4:3987064-3987083 None:intergenic 45.0%
CAAACGGATCATACTGGTAC+AGG + chr1.4:3987013-3987032 None:intergenic 45.0%
CTAACAAGGAGCTCATCAGA+AGG + chr1.4:3986918-3986937 None:intergenic 45.0%
GCTGTTCGAGACATTACTGT+TGG - chr1.4:3987149-3987168 MS.gene063284:intron 45.0%
GTGAAGCAGCAAAATTCCCT+TGG + chr1.4:3987071-3987090 None:intergenic 45.0%
TGACTATGCTGTCTTGCACA+TGG - chr1.4:3988125-3988144 MS.gene063284:CDS 45.0%
TTGGATCTGGATGCTGAGTT+TGG - chr1.4:3987443-3987462 MS.gene063284:intron 45.0%
TTTCGCAAATGCCATACCTG+AGG + chr1.4:3987290-3987309 None:intergenic 45.0%
! CACACTTGCTAACAATCCTC+AGG - chr1.4:3987271-3987290 MS.gene063284:intron 45.0%
! CGGGATTTTGGATGCAAAAG+GGG - chr1.4:3987126-3987145 MS.gene063284:intron 45.0%
! CTTTTTCTTCCGTCACCCAA+GGG - chr1.4:3987052-3987071 MS.gene063284:intron 45.0%
! GACGGGATTTTGGATGCAAA+AGG - chr1.4:3987124-3987143 MS.gene063284:intron 45.0%
! GGGATTTTGGATGCAAAAGG+GGG - chr1.4:3987127-3987146 MS.gene063284:intron 45.0%
!! CAATGGTTCTGACCTGATTC+AGG - chr1.4:3986980-3986999 MS.gene063284:intron 45.0%
!!! AGATTTTGAAGGCACTCTGC+AGG - chr1.4:3987604-3987623 MS.gene063284:CDS 45.0%
ACAGGTTCAGCTCCTGAATC+AGG + chr1.4:3986995-3987014 None:intergenic 50.0%
ACTAAGAAACCTATGGGGGC+TGG - chr1.4:3987527-3987546 MS.gene063284:CDS 50.0%
ACTCCATTCGTCTTGTCAGC+AGG + chr1.4:3987506-3987525 None:intergenic 50.0%
CATCCAGATCCAACTCTGGT+GGG + chr1.4:3987436-3987455 None:intergenic 50.0%
CCTCCTCTGCTCATCAACTT+TGG + chr1.4:3987096-3987115 None:intergenic 50.0%
CTAAGAAACCTATGGGGGCT+GGG - chr1.4:3987528-3987547 MS.gene063284:CDS 50.0%
CTCCATTCGTCTTGTCAGCA+GGG + chr1.4:3987505-3987524 None:intergenic 50.0%
TAAGAAACCTATGGGGGCTG+GGG - chr1.4:3987529-3987548 MS.gene063284:CDS 50.0%
TCAGCATCCAGATCCAACTC+TGG + chr1.4:3987440-3987459 None:intergenic 50.0%
! CCTTTTTCTTCCGTCACCCA+AGG - chr1.4:3987051-3987070 MS.gene063284:intron 50.0%
! GGCACTGTAAGACGGGATTT+TGG - chr1.4:3987114-3987133 MS.gene063284:intron 50.0%
! TGGCAAGGTAGTGGCTAACA+AGG + chr1.4:3986932-3986951 None:intergenic 50.0%
!! CCAAAGTTGATGAGCAGAGG+AGG - chr1.4:3987093-3987112 MS.gene063284:intron 50.0%
!! CCTTGGGTGACGGAAGAAAA+AGG + chr1.4:3987054-3987073 None:intergenic 50.0%
!! CTGCCAAAGTTGATGAGCAG+AGG - chr1.4:3987090-3987109 MS.gene063284:intron 50.0%
!! GGGTGACGGAAGAAAAAGGA+CGG + chr1.4:3987050-3987069 None:intergenic 50.0%
GACCCTGCTGACAAGACGAA+TGG - chr1.4:3987500-3987519 MS.gene063284:CDS 55.0%
GCATCCAGATCCAACTCTGG+TGG + chr1.4:3987437-3987456 None:intergenic 55.0%
GTTTGACTGCCCACCAGAGT+TGG - chr1.4:3987424-3987443 MS.gene063284:intron 55.0%
! ACTAGTGCTGCTGCTGAGCA+AGG - chr1.4:3987563-3987582 MS.gene063284:CDS 55.0%
! GTTGATGAAGGCGATGCTGC+TGG - chr1.4:3987473-3987492 MS.gene063284:intron 55.0%
!! CAGAGGAGGCACTGTAAGAC+GGG - chr1.4:3987107-3987126 MS.gene063284:intron 55.0%
!! GCAGAGGAGGCACTGTAAGA+CGG - chr1.4:3987106-3987125 MS.gene063284:intron 55.0%
AAACCTATGGGGGCTGGGGA+TGG - chr1.4:3987533-3987552 MS.gene063284:CDS 60.0%
AACCTATGGGGGCTGGGGAT+GGG - chr1.4:3987534-3987553 MS.gene063284:CDS 60.0%
CTGCCCACCAGAGTTGGATC+TGG - chr1.4:3987430-3987449 MS.gene063284:intron 60.0%
GAAGGGGCGAAGTCAACACC+AGG + chr1.4:3986900-3986919 None:intergenic 60.0%
! AGTGCTGCTGCTGAGCAAGG+CGG - chr1.4:3987566-3987585 MS.gene063284:CDS 60.0%
ACCTATGGGGGCTGGGGATG+GGG - chr1.4:3987535-3987554 MS.gene063284:CDS 65.0%
GGGGCGAAGTCAACACCAGG+TGG + chr1.4:3986897-3986916 None:intergenic 65.0%
ATGGGGGCTGGGGATGGGGC+TGG - chr1.4:3987539-3987558 MS.gene063284:CDS 75.0%
GCCCCATCCCCAGCCCCCAT+AGG + chr1.4:3987539-3987558 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 3986882 3988221 3986882 ID=MS.gene063284
chr1.4 mRNA 3986882 3988221 3986882 ID=MS.gene063284.t1;Parent=MS.gene063284
chr1.4 exon 3987811 3988221 3987811 ID=MS.gene063284.t1.exon1;Parent=MS.gene063284.t1
chr1.4 CDS 3987811 3988221 3987811 ID=cds.MS.gene063284.t1;Parent=MS.gene063284.t1
chr1.4 exon 3987478 3987702 3987478 ID=MS.gene063284.t1.exon2;Parent=MS.gene063284.t1
chr1.4 CDS 3987478 3987702 3987478 ID=cds.MS.gene063284.t1;Parent=MS.gene063284.t1
chr1.4 exon 3986882 3986998 3986882 ID=MS.gene063284.t1.exon3;Parent=MS.gene063284.t1
chr1.4 CDS 3986882 3986998 3986882 ID=cds.MS.gene063284.t1;Parent=MS.gene063284.t1
Gene Sequence

>MS.gene063284

ATGGAATTGCTTCCACCTGGTGTTGACTTCGCCCCTTCTGATGAGCTCCTTGTTAGCCACTACCTTGCCAACAAAAACAATGAAGAGGCTCAGAATTTCAATGGTTCTGACCTGATTCAGGAGCTGAACCTGTACCAGTATGATCCGTTTGAATTGCGTTTTACTCCGTCCTTTTTCTTCCGTCACCCAAGGGAATTTTGCTGCTTCACTGCCAAAGTTGATGAGCAGAGGAGGCACTGTAAGACGGGATTTTGGATGCAAAAGGGGGCTGTTCGAGACATTACTGTTGGAACTGATAACATGTTGGTGGGAAAGAAGTCTCTTTTTATGTTCTATATAGGAAATTCCGCTCAGAATGCCATCAAAACTAGCTGGACTATGTACGAGTACACACTTGCTAACAATCCTCAGGTATGGCATTTGCGAAAACTAACTTTTCCTCTGTTCATTATTTAATCAAGGATTAATTAATGTATTGGCAACTACTAATTGTTTTTTATTTTAAAAATTATTATGCAGGCTCGTTTTGTTGTTTGTCGTGTGTTTGACTGCCCACCAGAGTTGGATCTGGATGCTGAGTTTGGAGCTATAGTTGATGAAGGCGATGCTGCTGGAGATGACCCTGCTGACAAGACGAATGGAGTTACTAAGAAACCTATGGGGGCTGGGGATGGGGCTGGTACTAGTGCTGCTGCTGAGCAAGGCGGTGCTTCAAATGTCACAGATTTTGAAGGCACTCTGCAGGTAAAATATATTCCATTTTGATCTCTCTTTATATTAACCAATTAATGTTGTTGATCTTATTTGCAACTGATTCTTTAAAATTTCAAAAATTTTACAACTCAATCCATTCATGTGATGGTATTTTTTGATTGCCTCAATCTTTGCTACTGAATGTAACATGTCAAAATGTCAATTGTATGTATCACTCTACACATGTATTTTTATTTTTATTTTTGTGTAGAAATTAAGTTATAATTCTCAAAACATATTCTTCAAATCACGTCCTTTTTTTTTTATTAGTTAACGTTACTATTCTTACCAGATTCTTCAAATCACGTCATTTTTATTTTTCTTTAAATTTTTTGCTATGATAAATTCATTATTATTTTTTTTGTCGTTGTCACTTTTTGACAATCCAAATTTTCATTTCATTTTATAATGAAGACAAGAAGGTATTGCTGAAGTATTGAATTGCTTTGTTTGTTTTTGGTGTTTATCAGGCGAGTTATGCAGCATTTCTTGACTATGCTGTCTTGCACATGGAAGCTATGACCCCTGAGCAAATTATGCTTTCAATTATGGATGAAGATTTTCTTGAGATTGCTGACCTTGTATAA
Protein sequence

>MS.gene063284.t1

MELLPPGVDFAPSDELLVSHYLANKNNEEAQNFNGSDLIQELNLYQYDPFELRFTPSFFFRHPREFCCFTAKVDEQRRHCKTGFWMQKGAVRDITVGTDNMLVGKKSLFMFYIGNSAQNAIKTSWTMYEYTLANNPQARFVVCRVFDCPPELDLDAEFGAIVDEGDAAGDDPADKTNGVTKKPMGAGDGAGTSAAAEQGGASNVTDFEGTLQASYAAFLDYAVLHMEAMTPEQIMLSIMDEDFLEIADLV