Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063287.t1 | XP_003589157.1 | 96.4 | 412 | 15 | 0 | 1 | 412 | 1 | 412 | 1.60E-221 | 778.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063287.t1 | Q56XU4 | 43.0 | 449 | 180 | 17 | 1 | 409 | 1 | 413 | 3.6e-73 | 276.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063287.t1 | G7I2D9 | 96.4 | 412 | 15 | 0 | 1 | 412 | 1 | 412 | 1.1e-221 | 778.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063287.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063287.t1 | MTR_1g019120 | 97.330 | 412 | 11 | 0 | 1 | 412 | 1 | 412 | 0.0 | 830 |
| MS.gene063287.t1 | MTR_1g019120 | 97.643 | 297 | 7 | 0 | 116 | 412 | 1 | 297 | 0.0 | 600 |
| MS.gene063287.t1 | MTR_8g076080 | 52.740 | 146 | 67 | 2 | 1 | 145 | 2 | 146 | 6.20e-38 | 144 |
| MS.gene063287.t1 | MTR_8g076080 | 46.000 | 100 | 51 | 2 | 307 | 406 | 461 | 557 | 3.83e-18 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063287.t1 | AT1G19860 | 43.207 | 449 | 179 | 16 | 1 | 409 | 1 | 413 | 7.27e-95 | 291 |
| MS.gene063287.t1 | AT1G19860 | 42.424 | 429 | 173 | 15 | 21 | 409 | 21 | 415 | 2.02e-85 | 266 |
| MS.gene063287.t1 | AT5G66270 | 27.193 | 456 | 223 | 15 | 6 | 386 | 6 | 427 | 2.66e-31 | 124 |
| MS.gene063287.t1 | AT3G51180 | 34.921 | 252 | 125 | 9 | 1 | 225 | 1 | 240 | 3.78e-25 | 107 |
Find 95 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGGTTCTGGCGATTAC+TGG | 0.231142 | 1.4:-4038540 | None:intergenic |
| AGAATATTATTGAGTAATTC+AGG | 0.252544 | 1.4:-4038164 | None:intergenic |
| GCAATAGCTGGACTGATTTC+AGG | 0.255929 | 1.4:-4038416 | None:intergenic |
| TACATTATCTCCTGGTATAT+TGG | 0.266652 | 1.4:+4038034 | MS.gene063287:CDS |
| TCGTCAACATCCACTGAAAT+AGG | 0.270410 | 1.4:-4037939 | None:intergenic |
| TTGATAATGGCTGCTGGTTC+TGG | 0.282121 | 1.4:-4038550 | None:intergenic |
| AGTGGTCTCAACTTGATTAA+AGG | 0.289882 | 1.4:-4038297 | None:intergenic |
| GACGATTCCCATTACATTGA+TGG | 0.304640 | 1.4:+4037957 | MS.gene063287:CDS |
| CCATCTTCAACAGGCGTAAT+CGG | 0.319857 | 1.4:-4037996 | None:intergenic |
| TAGTTCAAAGAGAATGAAAA+TGG | 0.338707 | 1.4:+4038739 | MS.gene063287:CDS |
| CCAGCTAATAACTGGAATTT+CGG | 0.341281 | 1.4:-4037329 | None:intergenic |
| TGACGAGGGATTACCTTGTT+GGG | 0.359371 | 1.4:-4038708 | None:intergenic |
| TTTGTTGAAGGGACCTCAAC+AGG | 0.365719 | 1.4:-4038446 | None:intergenic |
| GTGGTCTCAACTTGATTAAA+GGG | 0.370543 | 1.4:-4038296 | None:intergenic |
| CTGACGAGGGATTACCTTGT+TGG | 0.373906 | 1.4:-4038709 | None:intergenic |
| TCAACTTGATTAAAGGGATT+AGG | 0.374101 | 1.4:-4038290 | None:intergenic |
| ACCAACTTCTCAATCACTTC+CGG | 0.375302 | 1.4:-4038194 | None:intergenic |
| GGTTTAATCCAGCTAATAAC+TGG | 0.385422 | 1.4:-4037337 | None:intergenic |
| CCGAAATTCCAGTTATTAGC+TGG | 0.389535 | 1.4:+4037329 | MS.gene063287:CDS |
| CAACAAGGTAATCCCTCGTC+AGG | 0.403842 | 1.4:+4038710 | MS.gene063287:CDS |
| AACATGACCATCAATGTAAT+GGG | 0.405673 | 1.4:-4037964 | None:intergenic |
| AGCTCCATTCCGACATCCTC+TGG | 0.406929 | 1.4:-4038651 | None:intergenic |
| CAACATGACCATCAATGTAA+TGG | 0.430043 | 1.4:-4037965 | None:intergenic |
| TGGCGATTACTGGAGGAGTA+TGG | 0.439812 | 1.4:-4038530 | None:intergenic |
| GAAAATCGAAGAGAGTTTCA+TGG | 0.443092 | 1.4:+4034052 | MS.gene063287:CDS |
| TCCGGAAGTGATTGAGAAGT+TGG | 0.446609 | 1.4:+4038193 | MS.gene063287:CDS |
| AGGAATCTCCTTCACAAGTT+GGG | 0.446886 | 1.4:+4037176 | MS.gene063287:CDS |
| CCCACATCCCCATCTTCAAC+AGG | 0.453414 | 1.4:-4038005 | None:intergenic |
| CCGATTACGCCTGTTGAAGA+TGG | 0.453700 | 1.4:+4037996 | MS.gene063287:CDS |
| CATCTTCAACAGGCGTAATC+GGG | 0.456517 | 1.4:-4037995 | None:intergenic |
| GAGGAATCTCCTTCACAAGT+TGG | 0.477493 | 1.4:+4037175 | MS.gene063287:CDS |
| CTCACATGGCAAGTGGTGGC+TGG | 0.478796 | 1.4:+4037733 | MS.gene063287:CDS |
| CGATTACGCCTGTTGAAGAT+GGG | 0.483143 | 1.4:+4037997 | MS.gene063287:CDS |
| ACAGGAGTAGCAGCAATAGC+TGG | 0.488249 | 1.4:-4038428 | None:intergenic |
| TTCCGAGTTAGATCTTTGTC+AGG | 0.491528 | 1.4:+4034077 | MS.gene063287:CDS |
| CAATAATATTCTCAACAATC+CGG | 0.493677 | 1.4:+4038175 | MS.gene063287:CDS |
| TTCGTGGATAAATAGCTTCA+AGG | 0.494743 | 1.4:-4037804 | None:intergenic |
| TTGTTGCCTCAAGGAGAAGC+TGG | 0.494944 | 1.4:+4037238 | MS.gene063287:CDS |
| TTATCTCCTGGTATATTGGA+TGG | 0.518348 | 1.4:+4038038 | MS.gene063287:CDS |
| ACCTCCGGCTGTGTGAGTAT+AGG | 0.526743 | 1.4:-4038354 | None:intergenic |
| TTGATGCAGTCCTATTTCAG+TGG | 0.526839 | 1.4:+4037929 | MS.gene063287:intron |
| CATAGTTTGATAATGGCTGC+TGG | 0.527380 | 1.4:-4038556 | None:intergenic |
| TAGCTGGATTAAACCACCTA+AGG | 0.527680 | 1.4:+4037345 | MS.gene063287:CDS |
| GCATGAGTTCCCTCAAATCC+AGG | 0.528859 | 1.4:-4037280 | None:intergenic |
| AGACTCGTACTTTGGAGGAA+TGG | 0.532082 | 1.4:-4037833 | None:intergenic |
| AGAGAAGACTCGTACTTTGG+AGG | 0.538641 | 1.4:-4037838 | None:intergenic |
| ACTGTATCATAGTTTGATAA+TGG | 0.546801 | 1.4:-4038563 | None:intergenic |
| GACGAGGGATTACCTTGTTG+GGG | 0.547183 | 1.4:-4038707 | None:intergenic |
| ACAAGGATGATATCTTTGCT+TGG | 0.550411 | 1.4:-4037219 | None:intergenic |
| GCCTGTTGAAGATGGGGATG+TGG | 0.558484 | 1.4:+4038004 | MS.gene063287:CDS |
| TCACACAGCCGGAGGTCAGA+TGG | 0.558835 | 1.4:+4038361 | MS.gene063287:CDS |
| GGAGGAATGGAAGATATTCG+TGG | 0.560244 | 1.4:-4037820 | None:intergenic |
| GAATTCAGCCCAACTTGTGA+AGG | 0.561325 | 1.4:-4037184 | None:intergenic |
| TGAAGATGGGGATGTGGGAG+CGG | 0.563372 | 1.4:+4038010 | MS.gene063287:CDS |
| CGTCAACTATGTCTACTCAA+TGG | 0.565260 | 1.4:+4038384 | MS.gene063287:CDS |
| AGCTTCTCCTTGAGGCAACA+AGG | 0.565922 | 1.4:-4037236 | None:intergenic |
| GGAGCGGATACATTATCTCC+TGG | 0.567885 | 1.4:+4038026 | MS.gene063287:CDS |
| ACTTGATTAAAGGGATTAGG+AGG | 0.568417 | 1.4:-4038287 | None:intergenic |
| GGTTAGGTTATTCTTATCTG+AGG | 0.568521 | 1.4:+4037156 | MS.gene063287:intron |
| CTAATAACTGGAATTTCGGA+CGG | 0.568918 | 1.4:-4037325 | None:intergenic |
| TATTGCTGCTACTCCTGTTG+AGG | 0.569271 | 1.4:+4038433 | MS.gene063287:CDS |
| TTAATAGTTCCAGAGGATGT+CGG | 0.569456 | 1.4:+4038642 | MS.gene063287:CDS |
| TGTCTACTCAATGGCATCGT+AGG | 0.571059 | 1.4:+4038393 | MS.gene063287:CDS |
| AGTATTTGATGAGGATGTAG+TGG | 0.572858 | 1.4:-4038315 | None:intergenic |
| GATATTTGATCAACATCAGA+GGG | 0.578943 | 1.4:+4037771 | MS.gene063287:CDS |
| AGGATGATATCTTTGCTTGG+AGG | 0.580593 | 1.4:-4037216 | None:intergenic |
| ATATCATCCTTGTTGCCTCA+AGG | 0.583248 | 1.4:+4037229 | MS.gene063287:CDS |
| TCTTCCTATACTCACACAGC+CGG | 0.583250 | 1.4:+4038350 | MS.gene063287:CDS |
| CACTGTCACGACTATGTCGA+TGG | 0.587970 | 1.4:+4038067 | MS.gene063287:CDS |
| TGAACTATGCATCCCTGACG+AGG | 0.599293 | 1.4:-4038723 | None:intergenic |
| AAGAGCTTGATTCAGCAACA+TGG | 0.600253 | 1.4:+4038485 | MS.gene063287:CDS |
| CTGGTTCTGGCGATTACTGG+AGG | 0.602943 | 1.4:-4038537 | None:intergenic |
| TCAGAACCAGCTTCTCCTTG+AGG | 0.604428 | 1.4:-4037244 | None:intergenic |
| AGTTCCAGAGGATGTCGGAA+TGG | 0.612631 | 1.4:+4038647 | MS.gene063287:CDS |
| AGTTGACGCCATCTGACCTC+CGG | 0.616959 | 1.4:-4038369 | None:intergenic |
| TACCTGACAAAGATCTAACT+CGG | 0.627396 | 1.4:-4034079 | None:intergenic |
| TTTGAACCATCCAATATACC+AGG | 0.631062 | 1.4:-4038044 | None:intergenic |
| GAACTATGCATCCCTGACGA+GGG | 0.631209 | 1.4:-4038722 | None:intergenic |
| TGACAAAGATCTAACTCGGA+AGG | 0.633363 | 1.4:-4034075 | None:intergenic |
| CCTGTTGAAGATGGGGATGT+GGG | 0.634741 | 1.4:+4038005 | MS.gene063287:CDS |
| GCTAGATCTCACATGGCAAG+TGG | 0.640415 | 1.4:+4037726 | MS.gene063287:CDS |
| AAATGATGCATCATGCTGAA+AGG | 0.642980 | 1.4:-4038681 | None:intergenic |
| GCATCATTTCAGCCCCAACA+AGG | 0.644422 | 1.4:+4038695 | MS.gene063287:CDS |
| AGATATTTGATCAACATCAG+AGG | 0.644462 | 1.4:+4037770 | MS.gene063287:CDS |
| AGATCTCACATGGCAAGTGG+TGG | 0.645516 | 1.4:+4037729 | MS.gene063287:CDS |
| TCCTATACTCACACAGCCGG+AGG | 0.650386 | 1.4:+4038353 | MS.gene063287:CDS |
| AGATCGTGCTAGATCTCACA+TGG | 0.650447 | 1.4:+4037719 | MS.gene063287:intron |
| TTAGTGAAGAGCAGTGAACA+TGG | 0.653142 | 1.4:+4038128 | MS.gene063287:CDS |
| AACAAGGTAATCCCTCGTCA+GGG | 0.664383 | 1.4:+4038711 | MS.gene063287:CDS |
| GATTACGCCTGTTGAAGATG+GGG | 0.664481 | 1.4:+4037998 | MS.gene063287:CDS |
| GCACAGTATGCACAAAACAC+CGG | 0.673863 | 1.4:+4038239 | MS.gene063287:CDS |
| TGTGTGAGTATAGGAAGAAG+TGG | 0.682691 | 1.4:-4038345 | None:intergenic |
| GCGGTGTGTGAAAATATGCG+TGG | 0.706081 | 1.4:+4034024 | None:intergenic |
| AGCTTGATTCAGCAACATGG+AGG | 0.714964 | 1.4:+4038488 | MS.gene063287:CDS |
| TGAGTTCCCTCAAATCCAGG+AGG | 0.756506 | 1.4:-4037277 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATATATGAAAAAATT+AGG | - | chr1.4:4034172-4034191 | None:intergenic | 10.0% |
| !! | AGAAATATATGAAAAAATTA+GGG | - | chr1.4:4034171-4034190 | None:intergenic | 10.0% |
| !! | ATTATAAACTAATTCTAATA+TGG | - | chr1.4:4035126-4035145 | None:intergenic | 10.0% |
| !! | GATAATATTAATAATATATG+TGG | - | chr1.4:4036686-4036705 | None:intergenic | 10.0% |
| !! | TTTCTTATTCAAATTATTAT+GGG | - | chr1.4:4036470-4036489 | None:intergenic | 10.0% |
| !! | AAAAAAAGAAATATCAAACA+AGG | - | chr1.4:4037866-4037885 | None:intergenic | 15.0% |
| !! | CTTTCTTATTCAAATTATTA+TGG | - | chr1.4:4036471-4036490 | None:intergenic | 15.0% |
| !! | TAATATTTATATTTCAACGT+TGG | + | chr1.4:4037413-4037432 | MS.gene063287:intron | 15.0% |
| !! | TTTAAAAATGAATCGATTAT+TGG | - | chr1.4:4034148-4034167 | None:intergenic | 15.0% |
| !! | TTTCTATACAATAAAATACA+TGG | - | chr1.4:4034701-4034720 | None:intergenic | 15.0% |
| !!! | AAAAAAATAACATTAGTTTC+AGG | + | chr1.4:4035580-4035599 | MS.gene063287:intron | 15.0% |
| !!! | TGAAACTAATGTTATTTTTT+TGG | - | chr1.4:4035581-4035600 | None:intergenic | 15.0% |
| !! | AACAAATGTCTAATCATAAA+AGG | - | chr1.4:4035225-4035244 | None:intergenic | 20.0% |
| !! | AGAATATTATTGAGTAATTC+AGG | - | chr1.4:4038167-4038186 | None:intergenic | 20.0% |
| !! | ATTATGGGTAATCATAATAA+AGG | - | chr1.4:4036455-4036474 | None:intergenic | 20.0% |
| !! | ATTGAAAAATGCAACTAAAT+TGG | - | chr1.4:4035630-4035649 | None:intergenic | 20.0% |
| !! | GAACTATTAAAAAAGATACA+AGG | - | chr1.4:4038632-4038651 | None:intergenic | 20.0% |
| !! | TATAACTACAAAAATACCTT+AGG | - | chr1.4:4037364-4037383 | None:intergenic | 20.0% |
| !! | TATCATAACTCGAAAAAAAA+AGG | + | chr1.4:4037629-4037648 | MS.gene063287:intron | 20.0% |
| !! | TTTATGATTATTGTAGACTA+GGG | - | chr1.4:4036348-4036367 | None:intergenic | 20.0% |
| !!! | CTTTCTGTTTTTTTTGTTTT+CGG | + | chr1.4:4034811-4034830 | MS.gene063287:intron | 20.0% |
| !!! | GATTTCTTTATTTAAACTCA+CGG | - | chr1.4:4035800-4035819 | None:intergenic | 20.0% |
| !!! | TAATGTACTAAAAAAGTGTA+TGG | - | chr1.4:4034598-4034617 | None:intergenic | 20.0% |
| !!! | TATGATTAGACATTTGTTAA+AGG | + | chr1.4:4035227-4035246 | MS.gene063287:intron | 20.0% |
| !!! | TTTTATGATTATTGTAGACT+AGG | - | chr1.4:4036349-4036368 | None:intergenic | 20.0% |
| !!! | TTTTTAAAAAGCTTGCAATT+TGG | + | chr1.4:4036198-4036217 | MS.gene063287:intron | 20.0% |
| ! | AAAACAAGTATTATCAATGG+TGG | - | chr1.4:4035413-4035432 | None:intergenic | 25.0% |
| ! | AAATCTTATTCCACTAAGTA+GGG | - | chr1.4:4034647-4034666 | None:intergenic | 25.0% |
| ! | AAGAAGTTGCAATTATATTG+CGG | + | chr1.4:4034776-4034795 | MS.gene063287:intron | 25.0% |
| ! | AAGGAAGTTAAGATGTATTT+GGG | + | chr1.4:4034412-4034431 | MS.gene063287:intron | 25.0% |
| ! | AAGTGAAAACATCAGATATT+CGG | - | chr1.4:4035710-4035729 | None:intergenic | 25.0% |
| ! | AATATTACTGAAGATGACTA+TGG | - | chr1.4:4037400-4037419 | None:intergenic | 25.0% |
| ! | AATTTACATGCAAAGCTAAA+AGG | - | chr1.4:4034261-4034280 | None:intergenic | 25.0% |
| ! | ACTAAAATATGACTGAAAGA+TGG | - | chr1.4:4036759-4036778 | None:intergenic | 25.0% |
| ! | ACTGTATCATAGTTTGATAA+TGG | - | chr1.4:4038566-4038585 | None:intergenic | 25.0% |
| ! | ATCCTTACTAACAGTAATAT+CGG | - | chr1.4:4035842-4035861 | None:intergenic | 25.0% |
| ! | ATGCTGAAGATATTTATCAA+AGG | - | chr1.4:4035084-4035103 | None:intergenic | 25.0% |
| ! | CAAAATGGCTATATTTATTC+TGG | + | chr1.4:4036563-4036582 | MS.gene063287:intron | 25.0% |
| ! | CAATAATATTCTCAACAATC+CGG | + | chr1.4:4038175-4038194 | MS.gene063287:CDS | 25.0% |
| ! | GTACTTTATAATGAACATCT+GGG | - | chr1.4:4037086-4037105 | None:intergenic | 25.0% |
| ! | TAAGGAAGTTAAGATGTATT+TGG | + | chr1.4:4034411-4034430 | MS.gene063287:intron | 25.0% |
| ! | TAGTTCAAAGAGAATGAAAA+TGG | + | chr1.4:4038739-4038758 | MS.gene063287:CDS | 25.0% |
| ! | TATCTCTAGTATGAATCTTA+TGG | + | chr1.4:4036405-4036424 | MS.gene063287:intron | 25.0% |
| ! | TGGAAAACAAGTATTATCAA+TGG | - | chr1.4:4035416-4035435 | None:intergenic | 25.0% |
| ! | TGTACTTTATAATGAACATC+TGG | - | chr1.4:4037087-4037106 | None:intergenic | 25.0% |
| ! | TTAGATGGTAAATGGTTTAA+TGG | + | chr1.4:4034853-4034872 | MS.gene063287:intron | 25.0% |
| ! | TTATGATTATTGTAGACTAG+GGG | - | chr1.4:4036347-4036366 | None:intergenic | 25.0% |
| ! | TTCAAAGTAACTTCATTGAA+TGG | - | chr1.4:4035179-4035198 | None:intergenic | 25.0% |
| ! | TTTGAATTGAGACTTATGAT+GGG | + | chr1.4:4034732-4034751 | MS.gene063287:intron | 25.0% |
| !! | AGTTTACATCTTTTGTTGAA+GGG | - | chr1.4:4038460-4038479 | None:intergenic | 25.0% |
| !! | GTAATTGCTTATTGTTTTCT+TGG | + | chr1.4:4035538-4035557 | MS.gene063287:intron | 25.0% |
| !! | TACTGTTAGTAAGGATATTT+TGG | + | chr1.4:4035846-4035865 | MS.gene063287:intron | 25.0% |
| !! | TAGTTTACATCTTTTGTTGA+AGG | - | chr1.4:4038461-4038480 | None:intergenic | 25.0% |
| !! | TGTTCTTTTTCTGTTTCAAA+AGG | + | chr1.4:4035928-4035947 | MS.gene063287:intron | 25.0% |
| !! | TTTGAGAATTTTTATGCTGT+TGG | + | chr1.4:4035651-4035670 | MS.gene063287:intron | 25.0% |
| !! | TTTTAATCAGGATCTTAACT+TGG | + | chr1.4:4036241-4036260 | MS.gene063287:intron | 25.0% |
| !! | TTTTGAATTGAGACTTATGA+TGG | + | chr1.4:4034731-4034750 | MS.gene063287:intron | 25.0% |
| !!! | AAAAACATTTGATGATGATC+CGG | - | chr1.4:4038261-4038280 | None:intergenic | 25.0% |
| !!! | ATCTGTTTTCACTTTTAATC+AGG | + | chr1.4:4036229-4036248 | MS.gene063287:intron | 25.0% |
| !!! | ATCTTTCAGTCATATTTTAG+TGG | + | chr1.4:4036758-4036777 | MS.gene063287:intron | 25.0% |
| !!! | ATCTTTTTTAATAGTTCCAG+AGG | + | chr1.4:4038635-4038654 | MS.gene063287:CDS | 25.0% |
| !!! | ATTTGATGATGAATTACTTG+TGG | + | chr1.4:4034448-4034467 | MS.gene063287:intron | 25.0% |
| !!! | GGTGGTTACTTTTTTTTAAT+AGG | - | chr1.4:4036999-4037018 | None:intergenic | 25.0% |
| AAAAGTAGACTACACTGATA+AGG | + | chr1.4:4034393-4034412 | MS.gene063287:intron | 30.0% | |
| AAAATGCAACTAAATTGGAC+AGG | - | chr1.4:4035625-4035644 | None:intergenic | 30.0% | |
| AAATGCAACTAAATTGGACA+GGG | - | chr1.4:4035624-4035643 | None:intergenic | 30.0% | |
| AACATGACCATCAATGTAAT+GGG | - | chr1.4:4037967-4037986 | None:intergenic | 30.0% | |
| AACTACAAAAATACCTTAGG+TGG | - | chr1.4:4037361-4037380 | None:intergenic | 30.0% | |
| AATTTCCTGATTAATCCGAT+CGG | + | chr1.4:4034234-4034253 | MS.gene063287:intron | 30.0% | |
| ACAGTATGCCAATATATCAT+CGG | + | chr1.4:4037555-4037574 | MS.gene063287:intron | 30.0% | |
| AGATATTTGATCAACATCAG+AGG | + | chr1.4:4037770-4037789 | MS.gene063287:CDS | 30.0% | |
| AGCAATTACTTTACTAGAAC+AGG | - | chr1.4:4035527-4035546 | None:intergenic | 30.0% | |
| AGTGAAAACATCAGATATTC+GGG | - | chr1.4:4035709-4035728 | None:intergenic | 30.0% | |
| CAAATCTTATTCCACTAAGT+AGG | - | chr1.4:4034648-4034667 | None:intergenic | 30.0% | |
| CAGCATATATGCAAAAATGT+AGG | + | chr1.4:4035098-4035117 | MS.gene063287:intron | 30.0% | |
| CATTTATTGTGCACTCAAAA+TGG | + | chr1.4:4036548-4036567 | MS.gene063287:intron | 30.0% | |
| CGATTATTGGAAGTGATTAT+TGG | - | chr1.4:4034135-4034154 | None:intergenic | 30.0% | |
| CTACTTAGTGGAATAAGATT+TGG | + | chr1.4:4034646-4034665 | MS.gene063287:intron | 30.0% | |
| GAAAAAACCGCTATATACAT+AGG | - | chr1.4:4037507-4037526 | None:intergenic | 30.0% | |
| GAATTCGTATGAACAAAACA+AGG | - | chr1.4:4035733-4035752 | None:intergenic | 30.0% | |
| GATATTTGATCAACATCAGA+GGG | + | chr1.4:4037771-4037790 | MS.gene063287:CDS | 30.0% | |
| GATTAGATGATTGATGAAGT+TGG | - | chr1.4:4034204-4034223 | None:intergenic | 30.0% | |
| GATTCATACTAGAGATACTT+AGG | - | chr1.4:4036402-4036421 | None:intergenic | 30.0% | |
| GGATTAGATTAGATGGTAAA+TGG | + | chr1.4:4034845-4034864 | MS.gene063287:intron | 30.0% | |
| GTAAAGTTGACAGAAATTCT+TGG | + | chr1.4:4036050-4036069 | MS.gene063287:intron | 30.0% | |
| TAATATCGGCGAAAACAAAA+GGG | - | chr1.4:4035828-4035847 | None:intergenic | 30.0% | |
| TCAACTTGATTAAAGGGATT+AGG | - | chr1.4:4038293-4038312 | None:intergenic | 30.0% | |
| TCACAGCACAAAGAAATAAA+CGG | - | chr1.4:4036884-4036903 | None:intergenic | 30.0% | |
| TCTAGTATGAATCTTATGGA+TGG | + | chr1.4:4036409-4036428 | MS.gene063287:intron | 30.0% | |
| TGTCAAACCTATGTATATAG+CGG | + | chr1.4:4037497-4037516 | MS.gene063287:intron | 30.0% | |
| TTGTAGGTTATAAGTGTGTT+TGG | + | chr1.4:4034912-4034931 | MS.gene063287:intron | 30.0% | |
| TTGTATTATCACTATGTACG+TGG | + | chr1.4:4035483-4035502 | MS.gene063287:intron | 30.0% | |
| ! | AGTTAAGATGTATTTGGGAT+TGG | + | chr1.4:4034417-4034436 | MS.gene063287:intron | 30.0% |
| ! | GTTCATTGGATTAGATTAGA+TGG | + | chr1.4:4034838-4034857 | MS.gene063287:intron | 30.0% |
| ! | GTTGTCTGAAGTGAATTAAT+TGG | - | chr1.4:4036084-4036103 | None:intergenic | 30.0% |
| ! | TTAATCAGGAAATTTTCCTC+TGG | - | chr1.4:4034228-4034247 | None:intergenic | 30.0% |
| ! | TTGTCAAATATTGGCTATGA+CGG | + | chr1.4:4035272-4035291 | MS.gene063287:intron | 30.0% |
| !! | ACAAAGAAATAAACGGGTTT+TGG | - | chr1.4:4036877-4036896 | None:intergenic | 30.0% |
| !! | ACTTGTTTTCCATTTCTTCT+TGG | + | chr1.4:4035424-4035443 | MS.gene063287:intron | 30.0% |
| !! | CATATTACAAGAGTGCTAAA+AGG | + | chr1.4:4037105-4037124 | MS.gene063287:intron | 30.0% |
| !! | GGATGAAAAAGTATTTGATG+AGG | - | chr1.4:4038327-4038346 | None:intergenic | 30.0% |
| !! | TTAGCTTTGCATGTAAATTC+AGG | + | chr1.4:4034262-4034281 | MS.gene063287:intron | 30.0% |
| !!! | CTCTGAAGTATGAATGTTTT+TGG | + | chr1.4:4036518-4036537 | MS.gene063287:intron | 30.0% |
| !!! | GTACACAATTTTAGAGCAAA+AGG | + | chr1.4:4038584-4038603 | MS.gene063287:CDS | 30.0% |
| !!! | TCTGTTTTTTTTGTTTTCGG+TGG | + | chr1.4:4034814-4034833 | MS.gene063287:intron | 30.0% |
| AAATGATGCATCATGCTGAA+AGG | - | chr1.4:4038684-4038703 | None:intergenic | 35.0% | |
| AACCCAGATAAATCCTCATT+AGG | - | chr1.4:4034486-4034505 | None:intergenic | 35.0% | |
| AAGAACACACCAAGAAGAAA+TGG | - | chr1.4:4035436-4035455 | None:intergenic | 35.0% | |
| AATGCAGAGTTATAGAGAGA+AGG | + | chr1.4:4036279-4036298 | MS.gene063287:intron | 35.0% | |
| ACAAAAATATAGCGCGTGTT+TGG | - | chr1.4:4035041-4035060 | None:intergenic | 35.0% | |
| ACAAGGATGATATCTTTGCT+TGG | - | chr1.4:4037222-4037241 | None:intergenic | 35.0% | |
| ACCCAGATAAATCCTCATTA+GGG | - | chr1.4:4034485-4034504 | None:intergenic | 35.0% | |
| ACCTAACCTGTTCAACAAAA+AGG | - | chr1.4:4037144-4037163 | None:intergenic | 35.0% | |
| ACTTGAAAACACACTAACAC+CGG | - | chr1.4:4035774-4035793 | None:intergenic | 35.0% | |
| ACTTGATTAAAGGGATTAGG+AGG | - | chr1.4:4038290-4038309 | None:intergenic | 35.0% | |
| AGTATGCCAATATATCATCG+GGG | + | chr1.4:4037557-4037576 | MS.gene063287:intron | 35.0% | |
| AGTATTTGATGAGGATGTAG+TGG | - | chr1.4:4038318-4038337 | None:intergenic | 35.0% | |
| AGTGGTCTCAACTTGATTAA+AGG | - | chr1.4:4038300-4038319 | None:intergenic | 35.0% | |
| AGTTGACAGAAATTCTTGGT+TGG | + | chr1.4:4036054-4036073 | MS.gene063287:intron | 35.0% | |
| ATACTAGAGATACTTAGGCT+AGG | - | chr1.4:4036397-4036416 | None:intergenic | 35.0% | |
| ATCAATCATCTAATCTCCAG+AGG | + | chr1.4:4034209-4034228 | MS.gene063287:intron | 35.0% | |
| ATGCAGAGTTATAGAGAGAA+GGG | + | chr1.4:4036280-4036299 | MS.gene063287:intron | 35.0% | |
| CAACATGACCATCAATGTAA+TGG | - | chr1.4:4037968-4037987 | None:intergenic | 35.0% | |
| CACAGCACAAAGAAATAAAC+GGG | - | chr1.4:4036883-4036902 | None:intergenic | 35.0% | |
| CAGTATGCCAATATATCATC+GGG | + | chr1.4:4037556-4037575 | MS.gene063287:intron | 35.0% | |
| CCAGCTAATAACTGGAATTT+CGG | - | chr1.4:4037332-4037351 | None:intergenic | 35.0% | |
| CTAATAACTGGAATTTCGGA+CGG | - | chr1.4:4037328-4037347 | None:intergenic | 35.0% | |
| CTGTCAAAAATTGGCTATGA+TGG | - | chr1.4:4035333-4035352 | None:intergenic | 35.0% | |
| CTTAGTGGAATAAGATTTGG+TGG | + | chr1.4:4034649-4034668 | MS.gene063287:intron | 35.0% | |
| GAAAATCGAAGAGAGTTTCA+TGG | + | chr1.4:4034052-4034071 | MS.gene063287:CDS | 35.0% | |
| GAATTTGAATCTCCCTAATG+AGG | + | chr1.4:4034470-4034489 | MS.gene063287:intron | 35.0% | |
| GGCTGAATATAAGTTGCAAT+TGG | + | chr1.4:4036118-4036137 | MS.gene063287:intron | 35.0% | |
| GGTTAGGTTATTCTTATCTG+AGG | + | chr1.4:4037156-4037175 | MS.gene063287:intron | 35.0% | |
| GGTTTAATCCAGCTAATAAC+TGG | - | chr1.4:4037340-4037359 | None:intergenic | 35.0% | |
| GTAATATCGGCGAAAACAAA+AGG | - | chr1.4:4035829-4035848 | None:intergenic | 35.0% | |
| GTGGTCTCAACTTGATTAAA+GGG | - | chr1.4:4038299-4038318 | None:intergenic | 35.0% | |
| TAAAGGTTTGCCACAATATC+AGG | + | chr1.4:4035244-4035263 | MS.gene063287:intron | 35.0% | |
| TAATGAGGATTTATCTGGGT+TGG | + | chr1.4:4034485-4034504 | MS.gene063287:intron | 35.0% | |
| TACATACCCCGATGATATAT+TGG | - | chr1.4:4037566-4037585 | None:intergenic | 35.0% | |
| TACCTGACAAAGATCTAACT+CGG | - | chr1.4:4034082-4034101 | None:intergenic | 35.0% | |
| TATAACTCTGCATTGAGACT+GGG | - | chr1.4:4036273-4036292 | None:intergenic | 35.0% | |
| TCCCTAATGAGGATTTATCT+GGG | + | chr1.4:4034481-4034500 | MS.gene063287:intron | 35.0% | |
| TTAATAGTTCCAGAGGATGT+CGG | + | chr1.4:4038642-4038661 | MS.gene063287:CDS | 35.0% | |
| TTCGTGGATAAATAGCTTCA+AGG | - | chr1.4:4037807-4037826 | None:intergenic | 35.0% | |
| TTGCAACTTCTTGAAAGACT+AGG | - | chr1.4:4034768-4034787 | None:intergenic | 35.0% | |
| TTTGAACCATCCAATATACC+AGG | - | chr1.4:4038047-4038066 | None:intergenic | 35.0% | |
| ! | ATTTTACCTCCTGGATTTGA+GGG | + | chr1.4:4037271-4037290 | MS.gene063287:CDS | 35.0% |
| ! | CAAGTATTATCAATGGTGGA+TGG | - | chr1.4:4035409-4035428 | None:intergenic | 35.0% |
| ! | CAAGTCAGTGTGATATTTTC+TGG | + | chr1.4:4035993-4036012 | MS.gene063287:intron | 35.0% |
| ! | CAGAAAATATCACACTGACT+TGG | - | chr1.4:4035995-4036014 | None:intergenic | 35.0% |
| ! | CATAGCCAATTTTTGACAGA+TGG | + | chr1.4:4035334-4035353 | MS.gene063287:intron | 35.0% |
| ! | CTGTTTCCTTTTTGTTGAAC+AGG | + | chr1.4:4037135-4037154 | MS.gene063287:intron | 35.0% |
| ! | TATTTTACCTCCTGGATTTG+AGG | + | chr1.4:4037270-4037289 | MS.gene063287:CDS | 35.0% |
| ! | TCCTTTTTGTTGAACAGGTT+AGG | + | chr1.4:4037140-4037159 | MS.gene063287:intron | 35.0% |
| ! | TCTGATGATATTTTACCTCC+TGG | + | chr1.4:4037262-4037281 | MS.gene063287:CDS | 35.0% |
| !! | ATACAAGGCTTCGTTGTTTT+TGG | - | chr1.4:4038617-4038636 | None:intergenic | 35.0% |
| !!! | TTTTGGTGTTCAAACAGTCT+TGG | + | chr1.4:4035863-4035882 | MS.gene063287:intron | 35.0% |
| AAATCTGCGACAAAACACCA+CGG | - | chr1.4:4035365-4035384 | None:intergenic | 40.0% | |
| AAGAGCTTGATTCAGCAACA+TGG | + | chr1.4:4038485-4038504 | MS.gene063287:CDS | 40.0% | |
| AATTTGCCCAACAAGAGGAT+CGG | - | chr1.4:4036306-4036325 | None:intergenic | 40.0% | |
| ACCAACTTCTCAATCACTTC+CGG | - | chr1.4:4038197-4038216 | None:intergenic | 40.0% | |
| ACGTTGGTGCAAGAAAGTAA+AGG | + | chr1.4:4037429-4037448 | MS.gene063287:intron | 40.0% | |
| AGGAATCTCCTTCACAAGTT+GGG | + | chr1.4:4037176-4037195 | MS.gene063287:CDS | 40.0% | |
| AGGATGATATCTTTGCTTGG+AGG | - | chr1.4:4037219-4037238 | None:intergenic | 40.0% | |
| AGTGTAATATAGCGCGTGTT+TGG | - | chr1.4:4034990-4035009 | None:intergenic | 40.0% | |
| ATAACTCTGCATTGAGACTG+GGG | - | chr1.4:4036272-4036291 | None:intergenic | 40.0% | |
| ATATCATCCTTGTTGCCTCA+AGG | + | chr1.4:4037229-4037248 | MS.gene063287:CDS | 40.0% | |
| ATATTCAGCCACACTATGAC+AGG | - | chr1.4:4036108-4036127 | None:intergenic | 40.0% | |
| CCGAAATTCCAGTTATTAGC+TGG | + | chr1.4:4037329-4037348 | MS.gene063287:CDS | 40.0% | |
| CGCCGATATTACTGTTAGTA+AGG | + | chr1.4:4035837-4035856 | MS.gene063287:intron | 40.0% | |
| CGTCAACTATGTCTACTCAA+TGG | + | chr1.4:4038384-4038403 | MS.gene063287:CDS | 40.0% | |
| CTATAACTCTGCATTGAGAC+TGG | - | chr1.4:4036274-4036293 | None:intergenic | 40.0% | |
| CTCCCTAATGAGGATTTATC+TGG | + | chr1.4:4034480-4034499 | MS.gene063287:intron | 40.0% | |
| CTCCTCCATCTGTCAAAAAT+TGG | - | chr1.4:4035342-4035361 | None:intergenic | 40.0% | |
| CTGAAATAGGACTGCATCAA+AGG | - | chr1.4:4037929-4037948 | None:intergenic | 40.0% | |
| CTGTTGCTCATGTGTTATAC+CGG | + | chr1.4:4035752-4035771 | MS.gene063287:intron | 40.0% | |
| CTTATTCCACTAAGTAGGGT+CGG | - | chr1.4:4034643-4034662 | None:intergenic | 40.0% | |
| GACGATTCCCATTACATTGA+TGG | + | chr1.4:4037957-4037976 | MS.gene063287:CDS | 40.0% | |
| GTCTTGTGCTGTGTAATCTT+TGG | + | chr1.4:4034527-4034546 | MS.gene063287:intron | 40.0% | |
| TAGATTCTCAAGTGCATGCA+TGG | - | chr1.4:4037020-4037039 | None:intergenic | 40.0% | |
| TAGCTGGATTAAACCACCTA+AGG | + | chr1.4:4037345-4037364 | MS.gene063287:CDS | 40.0% | |
| TCATCGGGGTATGTATTTCT+AGG | + | chr1.4:4037571-4037590 | MS.gene063287:intron | 40.0% | |
| TCGTCAACATCCACTGAAAT+AGG | - | chr1.4:4037942-4037961 | None:intergenic | 40.0% | |
| TGACAAAGATCTAACTCGGA+AGG | - | chr1.4:4034078-4034097 | None:intergenic | 40.0% | |
| TGGTTGTCAAAAAATGCGCA+CGG | - | chr1.4:4035313-4035332 | None:intergenic | 40.0% | |
| TGTGTGAGTATAGGAAGAAG+TGG | - | chr1.4:4038348-4038367 | None:intergenic | 40.0% | |
| TGTTCTTGTGGTTGTTAACC+AGG | + | chr1.4:4035449-4035468 | MS.gene063287:intron | 40.0% | |
| TTAGTGAAGAGCAGTGAACA+TGG | + | chr1.4:4038128-4038147 | MS.gene063287:CDS | 40.0% | |
| TTCCGAGTTAGATCTTTGTC+AGG | + | chr1.4:4034077-4034096 | MS.gene063287:CDS | 40.0% | |
| TTGATGCAGTCCTATTTCAG+TGG | + | chr1.4:4037929-4037948 | MS.gene063287:intron | 40.0% | |
| ! | AGCCAATTTTTGACAGATGG+AGG | + | chr1.4:4035337-4035356 | MS.gene063287:intron | 40.0% |
| ! | CAGGCACTGTTGTCAAATAT+TGG | + | chr1.4:4035263-4035282 | MS.gene063287:intron | 40.0% |
| ! | CTTTGTGCTGTGAGTTTTTG+TGG | + | chr1.4:4036891-4036910 | MS.gene063287:intron | 40.0% |
| ! | GGTCTTTGTTGTCTAACACT+GGG | + | chr1.4:4036139-4036158 | MS.gene063287:intron | 40.0% |
| ! | TGGTCTTTGTTGTCTAACAC+TGG | + | chr1.4:4036138-4036157 | MS.gene063287:intron | 40.0% |
| ! | TTCTTCTTGGTGTGTTCTTG+TGG | + | chr1.4:4035437-4035456 | MS.gene063287:intron | 40.0% |
| ! | TTGTTTTCGGTGGTGTTCAT+TGG | + | chr1.4:4034824-4034843 | MS.gene063287:intron | 40.0% |
| ! | TTTGTTGTCTAACACTGGGA+TGG | + | chr1.4:4036143-4036162 | MS.gene063287:intron | 40.0% |
| !! | ATTTTCTGGAGATGTATCGC+TGG | + | chr1.4:4036007-4036026 | MS.gene063287:intron | 40.0% |
| !! | CATAGTTTGATAATGGCTGC+TGG | - | chr1.4:4038559-4038578 | None:intergenic | 40.0% |
| !! | GTATTATCAATGGTGGATGG+TGG | - | chr1.4:4035406-4035425 | None:intergenic | 40.0% |
| !! | TCGTTAATTTGCCCAACAAG+AGG | - | chr1.4:4036311-4036330 | None:intergenic | 40.0% |
| !!! | AAACGGGTTTTGGATGAAAG+TGG | - | chr1.4:4036867-4036886 | None:intergenic | 40.0% |
| AACAAGGTAATCCCTCGTCA+GGG | + | chr1.4:4038711-4038730 | MS.gene063287:CDS | 45.0% | |
| AAGGTCCGATCGGATTAATC+AGG | - | chr1.4:4034242-4034261 | None:intergenic | 45.0% | |
| AAGGTCTCGGGATCTGATTA+GGG | + | chr1.4:4036173-4036192 | MS.gene063287:intron | 45.0% | |
| AATACAAAGCACAAGCAGCC+TGG | - | chr1.4:4035470-4035489 | None:intergenic | 45.0% | |
| AGACAACACCTGTCATAGTG+TGG | + | chr1.4:4036097-4036116 | MS.gene063287:intron | 45.0% | |
| AGAGAAGACTCGTACTTTGG+AGG | - | chr1.4:4037841-4037860 | None:intergenic | 45.0% | |
| AGATCGTGCTAGATCTCACA+TGG | + | chr1.4:4037719-4037738 | MS.gene063287:intron | 45.0% | |
| AGCTTGATTCAGCAACATGG+AGG | + | chr1.4:4038488-4038507 | MS.gene063287:CDS | 45.0% | |
| ATCTCAGCCACTTCCAACAT+GGG | + | chr1.4:4035965-4035984 | MS.gene063287:intron | 45.0% | |
| ATTCTCAAGTGCATGCATGG+TGG | - | chr1.4:4037017-4037036 | None:intergenic | 45.0% | |
| CATCTTCAACAGGCGTAATC+GGG | - | chr1.4:4037998-4038017 | None:intergenic | 45.0% | |
| CCATCTTCAACAGGCGTAAT+CGG | - | chr1.4:4037999-4038018 | None:intergenic | 45.0% | |
| CGATTACGCCTGTTGAAGAT+GGG | + | chr1.4:4037997-4038016 | MS.gene063287:CDS | 45.0% | |
| GAATTCAGCCCAACTTGTGA+AGG | - | chr1.4:4037187-4037206 | None:intergenic | 45.0% | |
| GACAACAGTGCCTGATATTG+TGG | - | chr1.4:4035257-4035276 | None:intergenic | 45.0% | |
| GAGGAATCTCCTTCACAAGT+TGG | + | chr1.4:4037175-4037194 | MS.gene063287:CDS | 45.0% | |
| GATTACGCCTGTTGAAGATG+GGG | + | chr1.4:4037998-4038017 | MS.gene063287:CDS | 45.0% | |
| GCAAAGCTAAAAGGTCCGAT+CGG | - | chr1.4:4034252-4034271 | None:intergenic | 45.0% | |
| GCAAGAGAAGACTCGTACTT+TGG | - | chr1.4:4037844-4037863 | None:intergenic | 45.0% | |
| GCACAGTATGCACAAAACAC+CGG | + | chr1.4:4038239-4038258 | MS.gene063287:CDS | 45.0% | |
| GGAGGAATGGAAGATATTCG+TGG | - | chr1.4:4037823-4037842 | None:intergenic | 45.0% | |
| GTATGAGCTACTGCTCTTGT+AGG | + | chr1.4:4034896-4034915 | MS.gene063287:intron | 45.0% | |
| TAACTCTGCATTGAGACTGG+GGG | - | chr1.4:4036271-4036290 | None:intergenic | 45.0% | |
| TATTGCTGCTACTCCTGTTG+AGG | + | chr1.4:4038433-4038452 | MS.gene063287:CDS | 45.0% | |
| TCCGGAAGTGATTGAGAAGT+TGG | + | chr1.4:4038193-4038212 | MS.gene063287:CDS | 45.0% | |
| TCTTCCTATACTCACACAGC+CGG | + | chr1.4:4038350-4038369 | MS.gene063287:CDS | 45.0% | |
| TGACGAGGGATTACCTTGTT+GGG | - | chr1.4:4038711-4038730 | None:intergenic | 45.0% | |
| TGCACTCTTTGTGCTTGGTT+AGG | + | chr1.4:4036948-4036967 | MS.gene063287:intron | 45.0% | |
| TGTCTACTCAATGGCATCGT+AGG | + | chr1.4:4038393-4038412 | MS.gene063287:CDS | 45.0% | |
| TTCCTTGCACTCTTTGTGCT+TGG | + | chr1.4:4036943-4036962 | MS.gene063287:intron | 45.0% | |
| TTTGTTGAAGGGACCTCAAC+AGG | - | chr1.4:4038449-4038468 | None:intergenic | 45.0% | |
| ! | AACCAAGCACAAAGAGTGCA+AGG | - | chr1.4:4036948-4036967 | None:intergenic | 45.0% |
| ! | AGACTCGTACTTTGGAGGAA+TGG | - | chr1.4:4037836-4037855 | None:intergenic | 45.0% |
| ! | AGCACAAAGAGTGCAAGGAA+AGG | - | chr1.4:4036943-4036962 | None:intergenic | 45.0% |
| ! | CAGATATTCGGGTTATGCAG+AGG | - | chr1.4:4035698-4035717 | None:intergenic | 45.0% |
| ! | GCAATAGCTGGACTGATTTC+AGG | - | chr1.4:4038419-4038438 | None:intergenic | 45.0% |
| !! | TTGATAATGGCTGCTGGTTC+TGG | - | chr1.4:4038553-4038572 | None:intergenic | 45.0% |
| !! | TTTCAGGTTCCAACGTCATG+TGG | + | chr1.4:4035596-4035615 | MS.gene063287:intron | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAC+TGG | + | chr1.4:4034365-4034384 | MS.gene063287:intron | 5.0% |
| !! | TTTATTTATATATATTATCT+TGG | + | chr1.4:4036973-4036992 | MS.gene063287:intron | 5.0% |
| ACAGGAGTAGCAGCAATAGC+TGG | - | chr1.4:4038431-4038450 | None:intergenic | 50.0% | |
| AGATCTCACATGGCAAGTGG+TGG | + | chr1.4:4037729-4037748 | MS.gene063287:CDS | 50.0% | |
| AGCTTCTCCTTGAGGCAACA+AGG | - | chr1.4:4037239-4037258 | None:intergenic | 50.0% | |
| AGTTCCAGAGGATGTCGGAA+TGG | + | chr1.4:4038647-4038666 | MS.gene063287:CDS | 50.0% | |
| ATGCACACCAATGCCAATGC+AGG | + | chr1.4:4034963-4034982 | MS.gene063287:intron | 50.0% | |
| ATGTAGCCGACCCTACTTAG+TGG | + | chr1.4:4034634-4034653 | MS.gene063287:intron | 50.0% | |
| CAACAAGGTAATCCCTCGTC+AGG | + | chr1.4:4038710-4038729 | MS.gene063287:CDS | 50.0% | |
| CACTGTCACGACTATGTCGA+TGG | + | chr1.4:4038067-4038086 | MS.gene063287:CDS | 50.0% | |
| CCGATTACGCCTGTTGAAGA+TGG | + | chr1.4:4037996-4038015 | MS.gene063287:CDS | 50.0% | |
| CCTGTTGAAGATGGGGATGT+GGG | + | chr1.4:4038005-4038024 | MS.gene063287:CDS | 50.0% | |
| CTGACGAGGGATTACCTTGT+TGG | - | chr1.4:4038712-4038731 | None:intergenic | 50.0% | |
| GAACTATGCATCCCTGACGA+GGG | - | chr1.4:4038725-4038744 | None:intergenic | 50.0% | |
| GAAGGTCTCGGGATCTGATT+AGG | + | chr1.4:4036172-4036191 | MS.gene063287:intron | 50.0% | |
| GACGAGGGATTACCTTGTTG+GGG | - | chr1.4:4038710-4038729 | None:intergenic | 50.0% | |
| GATCTCAGCCACTTCCAACA+TGG | + | chr1.4:4035964-4035983 | MS.gene063287:intron | 50.0% | |
| GCATCATTTCAGCCCCAACA+AGG | + | chr1.4:4038695-4038714 | MS.gene063287:CDS | 50.0% | |
| GCATGAGTTCCCTCAAATCC+AGG | - | chr1.4:4037283-4037302 | None:intergenic | 50.0% | |
| GCTAGATCTCACATGGCAAG+TGG | + | chr1.4:4037726-4037745 | MS.gene063287:CDS | 50.0% | |
| TCAGAACCAGCTTCTCCTTG+AGG | - | chr1.4:4037247-4037266 | None:intergenic | 50.0% | |
| TGAACTATGCATCCCTGACG+AGG | - | chr1.4:4038726-4038745 | None:intergenic | 50.0% | |
| TGAGTTCCCTCAAATCCAGG+AGG | - | chr1.4:4037280-4037299 | None:intergenic | 50.0% | |
| TGCACACCAATGCCAATGCA+GGG | + | chr1.4:4034964-4034983 | MS.gene063287:intron | 50.0% | |
| TGGCGATTACTGGAGGAGTA+TGG | - | chr1.4:4038533-4038552 | None:intergenic | 50.0% | |
| TGTCTAACACTGGGATGGAG+AGG | + | chr1.4:4036148-4036167 | MS.gene063287:intron | 50.0% | |
| TTGTTGCCTCAAGGAGAAGC+TGG | + | chr1.4:4037238-4037257 | MS.gene063287:CDS | 50.0% | |
| ! | GCTGGTGCTTGCAGAAGTAT+CGG | + | chr1.4:4036025-4036044 | MS.gene063287:intron | 50.0% |
| !! | GGTGGATGGTGGATCATTGT+GGG | - | chr1.4:4035395-4035414 | None:intergenic | 50.0% |
| !! | TGGTGGATGGTGGATCATTG+TGG | - | chr1.4:4035396-4035415 | None:intergenic | 50.0% |
| ACACTGGGATGGAGAGGTGA+AGG | + | chr1.4:4036154-4036173 | MS.gene063287:intron | 55.0% | |
| ACCTCCGGCTGTGTGAGTAT+AGG | - | chr1.4:4038357-4038376 | None:intergenic | 55.0% | |
| AGAAGGGCCGATCCTCTTGT+TGG | + | chr1.4:4036296-4036315 | MS.gene063287:intron | 55.0% | |
| AGCTCCATTCCGACATCCTC+TGG | - | chr1.4:4038654-4038673 | None:intergenic | 55.0% | |
| AGTTGACGCCATCTGACCTC+CGG | - | chr1.4:4038372-4038391 | None:intergenic | 55.0% | |
| ATGCGCACGGAAATCCTCCA+TGG | - | chr1.4:4035300-4035319 | None:intergenic | 55.0% | |
| CAGCCACTTCCAACATGGGA+GGG | + | chr1.4:4035969-4035988 | MS.gene063287:intron | 55.0% | |
| CCCACATCCCCATCTTCAAC+AGG | - | chr1.4:4038008-4038027 | None:intergenic | 55.0% | |
| GAAGGGCCGATCCTCTTGTT+GGG | + | chr1.4:4036297-4036316 | MS.gene063287:intron | 55.0% | |
| GACAGGGAACCACATGACGT+TGG | - | chr1.4:4035608-4035627 | None:intergenic | 55.0% | |
| GATGGAGAGGTGAAGGTCTC+GGG | + | chr1.4:4036161-4036180 | MS.gene063287:intron | 55.0% | |
| GCCTGTTGAAGATGGGGATG+TGG | + | chr1.4:4038004-4038023 | MS.gene063287:CDS | 55.0% | |
| GGATGGAGAGGTGAAGGTCT+CGG | + | chr1.4:4036160-4036179 | MS.gene063287:intron | 55.0% | |
| TCAGCCACTTCCAACATGGG+AGG | + | chr1.4:4035968-4035987 | MS.gene063287:intron | 55.0% | |
| TCCTATACTCACACAGCCGG+AGG | + | chr1.4:4038353-4038372 | MS.gene063287:CDS | 55.0% | |
| TGAAGATGGGGATGTGGGAG+CGG | + | chr1.4:4038010-4038029 | MS.gene063287:CDS | 55.0% | |
| TTTGACAGATGGAGGAGCCG+TGG | + | chr1.4:4035345-4035364 | MS.gene063287:intron | 55.0% | |
| ! | GTTTGGCCCTGCATTGGCAT+TGG | - | chr1.4:4034973-4034992 | None:intergenic | 55.0% |
| ! | TATTGGCTATGACGGCGCCA+TGG | + | chr1.4:4035280-4035299 | MS.gene063287:intron | 55.0% |
| !! | CTGCTGGTTCTGGCGATTAC+TGG | - | chr1.4:4038543-4038562 | None:intergenic | 55.0% |
| !! | CTGGTTCTGGCGATTACTGG+AGG | - | chr1.4:4038540-4038559 | None:intergenic | 55.0% |
| !! | GGTGCTTGCAGAAGTATCGG+AGG | + | chr1.4:4036028-4036047 | MS.gene063287:intron | 55.0% |
| CTCACATGGCAAGTGGTGGC+TGG | + | chr1.4:4037733-4037752 | MS.gene063287:CDS | 60.0% | |
| TCACACAGCCGGAGGTCAGA+TGG | + | chr1.4:4038361-4038380 | MS.gene063287:CDS | 60.0% | |
| TGGCCCTCCCATGTTGGAAG+TGG | - | chr1.4:4035975-4035994 | None:intergenic | 60.0% | |
| !! | CTGACTTGGCCCTCCCATGT+TGG | - | chr1.4:4035981-4036000 | None:intergenic | 60.0% |
| GCGCGTGTTTGGCCCTGCAT+TGG | - | chr1.4:4034979-4034998 | None:intergenic | 65.0% | |
| TGGCTATGACGGCGCCATGG+AGG | + | chr1.4:4035283-4035302 | MS.gene063287:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 4034039 | 4038781 | 4034039 | ID=MS.gene063287 |
| chr1.4 | mRNA | 4034039 | 4038781 | 4034039 | ID=MS.gene063287.t1;Parent=MS.gene063287 |
| chr1.4 | exon | 4034039 | 4034098 | 4034039 | ID=MS.gene063287.t1.exon1;Parent=MS.gene063287.t1 |
| chr1.4 | CDS | 4034039 | 4034098 | 4034039 | ID=cds.MS.gene063287.t1;Parent=MS.gene063287.t1 |
| chr1.4 | exon | 4037157 | 4037366 | 4037157 | ID=MS.gene063287.t1.exon2;Parent=MS.gene063287.t1 |
| chr1.4 | CDS | 4037157 | 4037366 | 4037157 | ID=cds.MS.gene063287.t1;Parent=MS.gene063287.t1 |
| chr1.4 | exon | 4037721 | 4037845 | 4037721 | ID=MS.gene063287.t1.exon3;Parent=MS.gene063287.t1 |
| chr1.4 | CDS | 4037721 | 4037845 | 4037721 | ID=cds.MS.gene063287.t1;Parent=MS.gene063287.t1 |
| chr1.4 | exon | 4037938 | 4038781 | 4037938 | ID=MS.gene063287.t1.exon4;Parent=MS.gene063287.t1 |
| chr1.4 | CDS | 4037938 | 4038781 | 4037938 | ID=cds.MS.gene063287.t1;Parent=MS.gene063287.t1 |
| Gene Sequence |
| Protein sequence |
