Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063374.t1 | XP_013464310.1 | 95 | 916 | 46 | 0 | 1 | 916 | 112 | 1027 | 0.00E+00 | 1752.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063374.t1 | P93820 | 43.5 | 913 | 508 | 5 | 1 | 911 | 95 | 1001 | 2.5e-212 | 740.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063374.t1 | A0A072VJP6 | 95.0 | 916 | 46 | 0 | 1 | 916 | 112 | 1027 | 0.0e+00 | 1752.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063374.t1 | TR | TRAF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063374.t1 | MTR_2g069560 | 94.978 | 916 | 46 | 0 | 1 | 916 | 112 | 1027 | 0.0 | 1762 |
| MS.gene063374.t1 | MTR_2g069560 | 94.978 | 916 | 46 | 0 | 1 | 916 | 104 | 1019 | 0.0 | 1762 |
| MS.gene063374.t1 | MTR_2g069560 | 94.708 | 718 | 38 | 0 | 199 | 916 | 1 | 718 | 0.0 | 1391 |
| MS.gene063374.t1 | MTR_2g069560 | 94.708 | 718 | 38 | 0 | 1 | 718 | 112 | 829 | 0.0 | 1372 |
| MS.gene063374.t1 | MTR_2g069560 | 93.502 | 554 | 36 | 0 | 1 | 554 | 104 | 657 | 0.0 | 1056 |
| MS.gene063374.t1 | MTR_2g069560 | 93.502 | 554 | 36 | 0 | 1 | 554 | 112 | 665 | 0.0 | 1055 |
| MS.gene063374.t1 | MTR_2g069560 | 95.225 | 377 | 18 | 0 | 1 | 377 | 112 | 488 | 0.0 | 731 |
| MS.gene063374.t1 | MTR_2g069560 | 95.225 | 377 | 18 | 0 | 1 | 377 | 112 | 488 | 0.0 | 730 |
| MS.gene063374.t1 | MTR_2g073720 | 62.162 | 74 | 19 | 1 | 37 | 110 | 37 | 101 | 3.40e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063374.t1 | AT1G04390 | 43.483 | 913 | 508 | 5 | 1 | 911 | 95 | 1001 | 0.0 | 723 |
Find 168 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTGTTATTAACTTAAT+TGG | 0.088135 | 2.4:+26012318 | MS.gene063374:CDS |
| TCTTATATTCTAAGTTATTT+TGG | 0.154673 | 2.4:+26012720 | MS.gene063374:CDS |
| CTCCTTCATATAGGCAATTA+AGG | 0.156017 | 2.4:+26014682 | MS.gene063374:CDS |
| GCTTGGTGAGTTCTGGATTT+TGG | 0.177722 | 2.4:+26014524 | MS.gene063374:CDS |
| TGCAAACTGTATTCCATAAA+AGG | 0.232443 | 2.4:+26012478 | MS.gene063374:CDS |
| CTCTCTCATCCCACAAATTA+TGG | 0.241887 | 2.4:-26011491 | None:intergenic |
| CTAAAGCTGTACACATCTTT+AGG | 0.249325 | 2.4:+26011090 | MS.gene063374:CDS |
| ATTGTTGGAATATGTATATT+TGG | 0.255950 | 2.4:+26013007 | MS.gene063374:CDS |
| TTGTGCTACTGCTTTGAATT+TGG | 0.257052 | 2.4:+26010807 | MS.gene063374:CDS |
| TTTGTTGGCTTGGTGAGTTC+TGG | 0.258921 | 2.4:+26014517 | MS.gene063374:CDS |
| GCAAAGGAATGTCTAGTAAA+AGG | 0.277394 | 2.4:-26012596 | None:intergenic |
| AAGAGAGTTCCCAATCCTTT+TGG | 0.277839 | 2.4:-26012769 | None:intergenic |
| CTCCAATGGCAAAACAATTT+CGG | 0.283584 | 2.4:-26011686 | None:intergenic |
| GGCAATTAAAATAATCAAAA+TGG | 0.286723 | 2.4:+26014608 | MS.gene063374:CDS |
| GTCTGGATGTGATTATTTAC+AGG | 0.297365 | 2.4:+26013717 | MS.gene063374:CDS |
| ATAGTTGTTCTCAATCCTTT+TGG | 0.298736 | 2.4:-26011527 | None:intergenic |
| GCAATCATCATATCAGGTTT+TGG | 0.308467 | 2.4:+26011602 | MS.gene063374:CDS |
| TCAGGGATAATATATAATCT+AGG | 0.310303 | 2.4:-26012269 | None:intergenic |
| TCCATAAAAGGTCTTGTTGC+TGG | 0.312735 | 2.4:+26012490 | MS.gene063374:CDS |
| TTGTTGGAATATGTATATTT+GGG | 0.319518 | 2.4:+26013008 | MS.gene063374:CDS |
| CAGTCATTCACAAGTTATAA+AGG | 0.319849 | 2.4:+26014356 | MS.gene063374:intron |
| CTTCCACAAAGAGAGCTTAT+AGG | 0.328839 | 2.4:-26014631 | None:intergenic |
| TTTCTGCAGCTTCACATTTG+TGG | 0.335071 | 2.4:+26012056 | MS.gene063374:intron |
| GATTGGGAACTCTCTTAATA+AGG | 0.355453 | 2.4:+26012776 | MS.gene063374:CDS |
| AAAAGGATTGAGAACAACTA+TGG | 0.357983 | 2.4:+26011529 | MS.gene063374:CDS |
| TGTTGAGGTGGCCTTCATCT+AGG | 0.358318 | 2.4:+26010983 | MS.gene063374:CDS |
| GCAAAACAATTTCGGAAGAT+TGG | 0.358748 | 2.4:-26011678 | None:intergenic |
| AACTTGTTATTAACTTAATT+GGG | 0.359198 | 2.4:+26012319 | MS.gene063374:CDS |
| ATTAAAACAGCCCTTGATAC+TGG | 0.361067 | 2.4:-26012141 | None:intergenic |
| TGAAGCATTGATGTTATTGT+TGG | 0.363458 | 2.4:+26012992 | MS.gene063374:CDS |
| TAATGGAAGCTAAATTGAAT+TGG | 0.363985 | 2.4:+26013623 | MS.gene063374:CDS |
| ATGTTCGGATAGAGGGGTTT+CGG | 0.364447 | 2.4:+26011303 | MS.gene063374:CDS |
| CAATAGAAGCGGAATAAATA+AGG | 0.367946 | 2.4:-26014746 | None:intergenic |
| GGGCTGGCAATCATCATATC+AGG | 0.369992 | 2.4:+26011596 | MS.gene063374:CDS |
| TTGCGACTCATTGTAGCAAA+TGG | 0.377835 | 2.4:+26012813 | MS.gene063374:CDS |
| TCGGCTTGCTCAATGTCTAT+TGG | 0.377904 | 2.4:+26011322 | MS.gene063374:CDS |
| AAAGTATTCAGGAAGCTTGC+TGG | 0.379435 | 2.4:+26014547 | MS.gene063374:CDS |
| TCCTTCATATAGGCAATTAA+GGG | 0.380231 | 2.4:+26014683 | MS.gene063374:CDS |
| AGTTATGTGTGGGACGTTCT+TGG | 0.385008 | 2.4:+26011766 | MS.gene063374:CDS |
| AACAAACACGGTTGCAATAG+TGG | 0.393093 | 2.4:-26010724 | None:intergenic |
| AGAAAATTGTTTAAAAGTGA+TGG | 0.395093 | 2.4:+26011441 | MS.gene063374:CDS |
| GCTAAATTGAATTGGCTTGT+TGG | 0.400345 | 2.4:+26013631 | MS.gene063374:CDS |
| AAAAGGTCTTGTTGCTGGAT+TGG | 0.407271 | 2.4:+26012495 | MS.gene063374:CDS |
| TATGTGGAGCTTTGTTGGCT+TGG | 0.408026 | 2.4:+26014507 | MS.gene063374:CDS |
| AGTTCAACATCATTACAAAC+AGG | 0.413790 | 2.4:-26011009 | None:intergenic |
| ACTATTGCAACCGTGTTTGT+TGG | 0.414256 | 2.4:+26010726 | MS.gene063374:CDS |
| TTATAAAGGTTGATATTAGC+TGG | 0.423730 | 2.4:+26014370 | MS.gene063374:CDS |
| CAACTATGGTTCTGTATTAG+TGG | 0.423956 | 2.4:+26011543 | MS.gene063374:CDS |
| TGCGACTCATTGTAGCAAAT+GGG | 0.425092 | 2.4:+26012814 | MS.gene063374:CDS |
| AGCCATATGTGGAGCTTTGT+TGG | 0.425519 | 2.4:+26014502 | MS.gene063374:CDS |
| CCCTCATGATGTTCGGATAG+AGG | 0.430203 | 2.4:+26011295 | MS.gene063374:CDS |
| TTACAGGGTTTGTTCAGATC+AGG | 0.430822 | 2.4:+26013733 | MS.gene063374:CDS |
| GGGGATTCCGTGAGTGTTCA+TGG | 0.433973 | 2.4:+26012834 | MS.gene063374:CDS |
| TGGAATACAGTTTGCAAATG+AGG | 0.436839 | 2.4:-26012471 | None:intergenic |
| GTTGGCTCAAATTACTCGTT+GGG | 0.438476 | 2.4:+26011576 | MS.gene063374:CDS |
| TTGTTGATGCCATAATTTGT+GGG | 0.444369 | 2.4:+26011482 | MS.gene063374:CDS |
| GTTATGTGTGGGACGTTCTT+GGG | 0.450565 | 2.4:+26011767 | MS.gene063374:CDS |
| TATATTTCGAACAATGCAAA+TGG | 0.452695 | 2.4:-26010896 | None:intergenic |
| TAAGCTCTCTTTGTGGAAGT+TGG | 0.457752 | 2.4:+26014635 | MS.gene063374:CDS |
| TGCAAATGAGGAGCAACCTC+TGG | 0.459121 | 2.4:-26012459 | None:intergenic |
| TTCAAGGTGAACCAGTATCA+AGG | 0.459159 | 2.4:+26012130 | MS.gene063374:CDS |
| AGATGAAGTAAGATTAAAGC+TGG | 0.462284 | 2.4:-26013153 | None:intergenic |
| ACTTCATCTCTTGATTCAGC+TGG | 0.463446 | 2.4:+26013167 | MS.gene063374:CDS |
| CTTTCAGTCCTGGAGTGAAA+TGG | 0.463586 | 2.4:+26012691 | MS.gene063374:CDS |
| TCTGATATACTGAAGGTCAT+AGG | 0.465492 | 2.4:+26012216 | MS.gene063374:CDS |
| CCTCATGATGTTCGGATAGA+GGG | 0.466662 | 2.4:+26011296 | MS.gene063374:CDS |
| CACAAAGTTATATTGCAGTC+TGG | 0.467245 | 2.4:+26013700 | MS.gene063374:CDS |
| ACTCTCATGGGTATAACTAC+AGG | 0.470412 | 2.4:-26011824 | None:intergenic |
| CTGCAAAGCATTTGCAAGAG+AGG | 0.471231 | 2.4:-26013101 | None:intergenic |
| TGATATGAAGTTCACTCTCA+TGG | 0.474270 | 2.4:-26011837 | None:intergenic |
| ATGGATATTTGTTTCTCCAA+TGG | 0.474322 | 2.4:-26011700 | None:intergenic |
| AATTGAATTGGCTTGTTGGA+TGG | 0.479401 | 2.4:+26013635 | MS.gene063374:CDS |
| TCTTGATTCTTCTAAGCAGT+TGG | 0.480319 | 2.4:+26014587 | MS.gene063374:CDS |
| GTAAGATTAAAGCTGGGAAA+AGG | 0.480512 | 2.4:-26013146 | None:intergenic |
| AGCCAACAAAGCTCCACATA+TGG | 0.482790 | 2.4:-26014504 | None:intergenic |
| AATCTAACCCTCATGATGTT+CGG | 0.483450 | 2.4:+26011288 | MS.gene063374:CDS |
| GGAAAAGGTGTGCCCCACTT+TGG | 0.488293 | 2.4:-26013131 | None:intergenic |
| AGTAGCACCTCTTTCAGTCC+TGG | 0.489560 | 2.4:+26012681 | MS.gene063374:CDS |
| ATTTGTGGGATGAGAGAGAC+AGG | 0.492475 | 2.4:+26011496 | MS.gene063374:CDS |
| TGGTTGTTTGTGGGTTAACA+TGG | 0.493074 | 2.4:+26014452 | MS.gene063374:CDS |
| TGAACATGCATATGTGGTAC+TGG | 0.495754 | 2.4:-26013679 | None:intergenic |
| ATTCAATTTGCAGCCATATG+TGG | 0.496585 | 2.4:+26014491 | MS.gene063374:CDS |
| CAGGGATAATATATAATCTA+GGG | 0.497938 | 2.4:-26012268 | None:intergenic |
| TATAAAGGTTGATATTAGCT+GGG | 0.501910 | 2.4:+26014371 | MS.gene063374:CDS |
| GTCTCATAGCTCCTTCATAT+AGG | 0.503354 | 2.4:+26014673 | MS.gene063374:CDS |
| ACAAATGATTGTGCAGGCGA+TGG | 0.504540 | 2.4:+26011262 | MS.gene063374:CDS |
| CATTGATTAAACTAGTACAT+TGG | 0.512817 | 2.4:+26014397 | MS.gene063374:CDS |
| CTCTCATGGGTATAACTACA+GGG | 0.512953 | 2.4:-26011823 | None:intergenic |
| ATTGAATTGGCTTGTTGGAT+GGG | 0.513309 | 2.4:+26013636 | MS.gene063374:CDS |
| TGGCCTATAAGCTCTCTTTG+TGG | 0.514178 | 2.4:+26014628 | MS.gene063374:CDS |
| GAAACAAATATCCATGGTAA+AGG | 0.514701 | 2.4:+26011708 | MS.gene063374:CDS |
| GCTGGATTGGTAAAGGAGAC+TGG | 0.514721 | 2.4:+26012508 | MS.gene063374:CDS |
| CTTGTTGATGCCATAATTTG+TGG | 0.517271 | 2.4:+26011481 | MS.gene063374:CDS |
| ATTTCTACAAATGATTGTGC+AGG | 0.517797 | 2.4:+26011256 | MS.gene063374:CDS |
| TCTTGTTGCTGGATTGGTAA+AGG | 0.518147 | 2.4:+26012501 | MS.gene063374:CDS |
| TCTGAGTGCTACAAGTGAAA+AGG | 0.520491 | 2.4:+26010840 | MS.gene063374:CDS |
| CCCTCTATCCGAACATCATG+AGG | 0.521428 | 2.4:-26011296 | None:intergenic |
| TCCTTTGCAATTTAGTAGAG+AGG | 0.521866 | 2.4:+26012611 | MS.gene063374:CDS |
| TCTATTGAACTTAACCATGA+AGG | 0.522377 | 2.4:+26014762 | MS.gene063374:CDS |
| CAAATGATTGTGCAGGCGAT+GGG | 0.525532 | 2.4:+26011263 | MS.gene063374:CDS |
| AGTTGGCTCAAATTACTCGT+TGG | 0.527311 | 2.4:+26011575 | MS.gene063374:CDS |
| GTAATGATATTCATGTAGAA+AGG | 0.527922 | 2.4:+26012436 | MS.gene063374:CDS |
| TGTAGCACAAAAGCTTATAG+AGG | 0.528432 | 2.4:+26011223 | MS.gene063374:CDS |
| GCTCAAATTACTCGTTGGGC+TGG | 0.529100 | 2.4:+26011580 | MS.gene063374:CDS |
| TCCCTTAATTGCCTATATGA+AGG | 0.529685 | 2.4:-26014684 | None:intergenic |
| ACAAATATCCATGGTAAAGG+AGG | 0.530448 | 2.4:+26011711 | MS.gene063374:CDS |
| GCACAAAAGCTTATAGAGGA+TGG | 0.531800 | 2.4:+26011227 | MS.gene063374:CDS |
| CAATTAAGTTAATAACAAGT+TGG | 0.532753 | 2.4:-26012317 | None:intergenic |
| CACGGTTGCAATAGTGGACT+CGG | 0.534163 | 2.4:-26010718 | None:intergenic |
| AGACAGGGCCGTGTTCCAAA+AGG | 0.534873 | 2.4:+26011512 | MS.gene063374:CDS |
| TGAGCACAATTCTGTTGAGG+TGG | 0.536544 | 2.4:+26010971 | MS.gene063374:CDS |
| GATGAAGTAAGATTAAAGCT+GGG | 0.545003 | 2.4:-26013152 | None:intergenic |
| ACTTCTGAAGGTAGAAGTGC+TGG | 0.546217 | 2.4:-26012879 | None:intergenic |
| CTGGATTGGTAAAGGAGACT+GGG | 0.546314 | 2.4:+26012509 | MS.gene063374:CDS |
| TTGGAATATGTATATTTGGG+AGG | 0.551105 | 2.4:+26013011 | MS.gene063374:CDS |
| TTGCAGACAATCTCCAAAGT+GGG | 0.558280 | 2.4:+26013118 | MS.gene063374:CDS |
| TTTCACTCCAGGACTGAAAG+AGG | 0.560173 | 2.4:-26012688 | None:intergenic |
| ATGGTTAAGTTCAATAGAAG+CGG | 0.567320 | 2.4:-26014757 | None:intergenic |
| TTTCAGTCCCTCCTTTACCA+TGG | 0.569781 | 2.4:-26011719 | None:intergenic |
| TCTGGATGTGATTATTTACA+GGG | 0.570759 | 2.4:+26013718 | MS.gene063374:CDS |
| TCAAGGTGAACCAGTATCAA+GGG | 0.573541 | 2.4:+26012131 | MS.gene063374:CDS |
| ATTAGTGGAAGCATGTAAGT+TGG | 0.575824 | 2.4:+26011558 | MS.gene063374:CDS |
| ACCATAAAATAAGACAACAT+TGG | 0.575853 | 2.4:-26012538 | None:intergenic |
| ATTGGAGAAACAAATATCCA+TGG | 0.576382 | 2.4:+26011702 | MS.gene063374:CDS |
| GAAACATACCATTTCACTCC+AGG | 0.577863 | 2.4:-26012699 | None:intergenic |
| GATATGAAGTTCACTCTCAT+GGG | 0.583514 | 2.4:-26011836 | None:intergenic |
| ATGATACATCTTTGATACTG+TGG | 0.585455 | 2.4:-26012363 | None:intergenic |
| GCGACTCATTGTAGCAAATG+GGG | 0.586804 | 2.4:+26012815 | MS.gene063374:CDS |
| TGTATTATCTGATATACTGA+AGG | 0.587784 | 2.4:+26012209 | MS.gene063374:CDS |
| ACCTCTCTACTAAATTGCAA+AGG | 0.591394 | 2.4:-26012612 | None:intergenic |
| CAAACAGGGAACCTAGATGA+AGG | 0.594928 | 2.4:-26010994 | None:intergenic |
| TACTTGATGTGAGGACAGCA+AGG | 0.595534 | 2.4:-26010770 | None:intergenic |
| AACCCACAAACAACCAGAAG+GGG | 0.597408 | 2.4:-26014445 | None:intergenic |
| ACTTACTGATTACGTGTGCA+TGG | 0.599009 | 2.4:+26011860 | MS.gene063374:CDS |
| ACTTTGTGAACATGCATATG+TGG | 0.600186 | 2.4:-26013685 | None:intergenic |
| GTTAAGCATGGCATCAAATG+TGG | 0.600853 | 2.4:+26010672 | None:intergenic |
| TTGCTCTGAGGAGTTATGTG+TGG | 0.604086 | 2.4:+26011755 | MS.gene063374:CDS |
| TAATACAGATCTAGCATGTG+AGG | 0.610195 | 2.4:-26012193 | None:intergenic |
| TGCAACTTCTACTTGATGTG+AGG | 0.612048 | 2.4:-26010779 | None:intergenic |
| TGCTCTGAGGAGTTATGTGT+GGG | 0.613589 | 2.4:+26011756 | MS.gene063374:CDS |
| GGGTGGCTTACAATTCATTG+TGG | 0.615987 | 2.4:+26011787 | MS.gene063374:CDS |
| CTCATGATGTTCGGATAGAG+GGG | 0.616659 | 2.4:+26011297 | MS.gene063374:CDS |
| GATGTATCATAGAAAGCAGA+GGG | 0.617898 | 2.4:+26012376 | MS.gene063374:CDS |
| TAACCCACAAACAACCAGAA+GGG | 0.618235 | 2.4:-26014446 | None:intergenic |
| AATAACACCATGAACACTCA+CGG | 0.621202 | 2.4:-26012841 | None:intergenic |
| CAAATATCCATGGTAAAGGA+GGG | 0.623502 | 2.4:+26011712 | MS.gene063374:CDS |
| TGTGAGGAAATATAATTACA+TGG | 0.628481 | 2.4:-26012177 | None:intergenic |
| TTTGCAGACAATCTCCAAAG+TGG | 0.628783 | 2.4:+26013117 | MS.gene063374:CDS |
| TCAGATCAGGAATGCAAGAG+AGG | 0.630141 | 2.4:+26013746 | MS.gene063374:CDS |
| TTAACCCACAAACAACCAGA+AGG | 0.634727 | 2.4:-26014447 | None:intergenic |
| TTTCAATTAGAAGATTAAGG+AGG | 0.635301 | 2.4:-26011645 | None:intergenic |
| ATGTGTGGGACGTTCTTGGG+TGG | 0.646051 | 2.4:+26011770 | MS.gene063374:CDS |
| CTACTAGATAGCACTTCTGA+AGG | 0.647267 | 2.4:-26012891 | None:intergenic |
| AGATGTATCATAGAAAGCAG+AGG | 0.653768 | 2.4:+26012375 | MS.gene063374:CDS |
| ATTGGTAAAGGAGACTGGGA+AGG | 0.660276 | 2.4:+26012513 | MS.gene063374:CDS |
| CCTCTATCCGAACATCATGA+GGG | 0.663643 | 2.4:-26011295 | None:intergenic |
| AAATTCAAAGCAGTAGCACA+AGG | 0.669590 | 2.4:-26010805 | None:intergenic |
| TGCAGACAATCTCCAAAGTG+GGG | 0.673141 | 2.4:+26013119 | MS.gene063374:CDS |
| TCAATTATCATGTTGCTCTG+AGG | 0.675945 | 2.4:+26011743 | MS.gene063374:CDS |
| ACCCACAAACAACCAGAAGG+GGG | 0.681171 | 2.4:-26014444 | None:intergenic |
| GTTCAACATCATTACAAACA+GGG | 0.689432 | 2.4:-26011008 | None:intergenic |
| TAGACAAGATCCAACAAACA+CGG | 0.705372 | 2.4:-26010736 | None:intergenic |
| TTAAAAGTGATGGATTCGTG+TGG | 0.719236 | 2.4:+26011451 | MS.gene063374:CDS |
| TATTCATGTAGAAAGGCCAG+AGG | 0.722961 | 2.4:+26012443 | MS.gene063374:CDS |
| TCTCATGGGTATAACTACAG+GGG | 0.729707 | 2.4:-26011822 | None:intergenic |
| TTTGTGGGATGAGAGAGACA+GGG | 0.753747 | 2.4:+26011497 | MS.gene063374:CDS |
| GTTCGAAATATAAAAGACCG+CGG | 0.753888 | 2.4:+26010907 | MS.gene063374:CDS |
| ATTCAATCTTCTGTGCACCG+CGG | 0.760395 | 2.4:-26010924 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTTCTAAAATTTCA+TGG | + | chr2.4:26011982-26012001 | MS.gene063374:intron | 10.0% |
| !! | AAGTCATACAAAAATAATAA+TGG | - | chr2.4:26011901-26011920 | None:intergenic | 15.0% |
| !! | AATAAATATGGAAATAAACA+TGG | - | chr2.4:26013285-26013304 | None:intergenic | 15.0% |
| !!! | AACTTGTTATTAACTTAATT+GGG | + | chr2.4:26012319-26012338 | MS.gene063374:CDS | 15.0% |
| !!! | AATTTTAGAAATATAATCAG+TGG | - | chr2.4:26011979-26011998 | None:intergenic | 15.0% |
| !!! | TATTTTCAATTAGAAGATTA+AGG | - | chr2.4:26011651-26011670 | None:intergenic | 15.0% |
| !!! | TCTTATATTCTAAGTTATTT+TGG | + | chr2.4:26012720-26012739 | MS.gene063374:CDS | 15.0% |
| !!! | TTGTTTTATATGATAAACAT+TGG | + | chr2.4:26011354-26011373 | MS.gene063374:intron | 15.0% |
| !! | AACATTTGTTTAAGTAGTTT+AGG | + | chr2.4:26013556-26013575 | MS.gene063374:intron | 20.0% |
| !! | ACATTAACATTTCATAAAGA+TGG | - | chr2.4:26014128-26014147 | None:intergenic | 20.0% |
| !! | AGAAAATTGTTTAAAAGTGA+TGG | + | chr2.4:26011441-26011460 | MS.gene063374:CDS | 20.0% |
| !! | ATTGTTGGAATATGTATATT+TGG | + | chr2.4:26013007-26013026 | MS.gene063374:CDS | 20.0% |
| !! | CAAACAATACTTTATCAAAT+AGG | - | chr2.4:26014025-26014044 | None:intergenic | 20.0% |
| !! | CAATTAAGTTAATAACAAGT+TGG | - | chr2.4:26012320-26012339 | None:intergenic | 20.0% |
| !! | GGCAATTAAAATAATCAAAA+TGG | + | chr2.4:26014608-26014627 | MS.gene063374:CDS | 20.0% |
| !! | TATATGGAAGGAAATAAATA+TGG | - | chr2.4:26013297-26013316 | None:intergenic | 20.0% |
| !! | TCTGTAAAATATCAATTTCA+AGG | - | chr2.4:26013332-26013351 | None:intergenic | 20.0% |
| !! | TTCAAACTTAATCTAAGAAT+TGG | + | chr2.4:26014079-26014098 | MS.gene063374:intron | 20.0% |
| !! | TTGTTGGAATATGTATATTT+GGG | + | chr2.4:26013008-26013027 | MS.gene063374:CDS | 20.0% |
| !!! | AAATGTTTTTTGTTTTGTTG+AGG | - | chr2.4:26011143-26011162 | None:intergenic | 20.0% |
| !!! | AATGTTTTTTGTTTTGTTGA+GGG | - | chr2.4:26011142-26011161 | None:intergenic | 20.0% |
| !!! | AGAATTTAATTTGAACATCT+AGG | - | chr2.4:26013851-26013870 | None:intergenic | 20.0% |
| !!! | ATATGAACAATAACTTTTCA+GGG | - | chr2.4:26012289-26012308 | None:intergenic | 20.0% |
| !!! | CAACTCTTATTTGAAAAATA+CGG | - | chr2.4:26013361-26013380 | None:intergenic | 20.0% |
| !!! | CAACTTGTTATTAACTTAAT+TGG | + | chr2.4:26012318-26012337 | MS.gene063374:CDS | 20.0% |
| !!! | CACTTTTAAACAATTTTCTT+GGG | - | chr2.4:26011440-26011459 | None:intergenic | 20.0% |
| !!! | CTAAGTTATTTTGGATTTTA+TGG | + | chr2.4:26012729-26012748 | MS.gene063374:CDS | 20.0% |
| !!! | CTATTTGATAAAGTATTGTT+TGG | + | chr2.4:26014023-26014042 | MS.gene063374:intron | 20.0% |
| !!! | TCACTTTTAAACAATTTTCT+TGG | - | chr2.4:26011441-26011460 | None:intergenic | 20.0% |
| !!! | TCTGTTAACTTTAAATTTTG+TGG | + | chr2.4:26014284-26014303 | MS.gene063374:intron | 20.0% |
| ! | AAAATGACAAGTCAATAAAC+TGG | - | chr2.4:26013484-26013503 | None:intergenic | 25.0% |
| ! | ACCATAAAATAAGACAACAT+TGG | - | chr2.4:26012541-26012560 | None:intergenic | 25.0% |
| ! | AGATTCTTCTAGATATCTAT+AGG | + | chr2.4:26013222-26013241 | MS.gene063374:intron | 25.0% |
| ! | ATCCTTAAAAATTAGAAGCA+AGG | + | chr2.4:26014222-26014241 | MS.gene063374:intron | 25.0% |
| ! | CAGGGATAATATATAATCTA+GGG | - | chr2.4:26012271-26012290 | None:intergenic | 25.0% |
| ! | CATCAAAAATCAAAAGCAAA+GGG | - | chr2.4:26014167-26014186 | None:intergenic | 25.0% |
| ! | CTATAAACTGGATAATAGAA+TGG | - | chr2.4:26013440-26013459 | None:intergenic | 25.0% |
| ! | CTCATGAAAATTTAAGAACA+TGG | + | chr2.4:26013893-26013912 | MS.gene063374:intron | 25.0% |
| ! | GACAAAAGTAAATGTTTGTT+AGG | - | chr2.4:26011406-26011425 | None:intergenic | 25.0% |
| ! | GACTGCAATAATAAATAACA+AGG | - | chr2.4:26014341-26014360 | None:intergenic | 25.0% |
| ! | GGACAATTTCTCATAAAAAA+TGG | - | chr2.4:26014253-26014272 | None:intergenic | 25.0% |
| ! | GTAATGATATTCATGTAGAA+AGG | + | chr2.4:26012436-26012455 | MS.gene063374:CDS | 25.0% |
| ! | TAATGGAAGCTAAATTGAAT+TGG | + | chr2.4:26013623-26013642 | MS.gene063374:CDS | 25.0% |
| ! | TATAGATATCTAGAAGAATC+TGG | - | chr2.4:26013223-26013242 | None:intergenic | 25.0% |
| ! | TATATTTCGAACAATGCAAA+TGG | - | chr2.4:26010899-26010918 | None:intergenic | 25.0% |
| ! | TCAGGGATAATATATAATCT+AGG | - | chr2.4:26012272-26012291 | None:intergenic | 25.0% |
| ! | TCATCAAAAATCAAAAGCAA+AGG | - | chr2.4:26014168-26014187 | None:intergenic | 25.0% |
| ! | TGTATTATCTGATATACTGA+AGG | + | chr2.4:26012209-26012228 | MS.gene063374:CDS | 25.0% |
| ! | TGTGAGGAAATATAATTACA+TGG | - | chr2.4:26012180-26012199 | None:intergenic | 25.0% |
| ! | TTAGAAATATAATCAGTGGT+AGG | - | chr2.4:26011975-26011994 | None:intergenic | 25.0% |
| ! | TTTATATCTTATCTTGACCA+GGG | + | chr2.4:26013940-26013959 | MS.gene063374:intron | 25.0% |
| ! | TTTCAATTAGAAGATTAAGG+AGG | - | chr2.4:26011648-26011667 | None:intergenic | 25.0% |
| !! | AATGAATTTTCCAAAAGGAT+TGG | + | chr2.4:26012759-26012778 | MS.gene063374:CDS | 25.0% |
| !! | ACAGAAGATTGAATATTTTG+TGG | + | chr2.4:26010933-26010952 | MS.gene063374:CDS | 25.0% |
| !! | ATCCTTGCTTCTAATTTTTA+AGG | - | chr2.4:26014227-26014246 | None:intergenic | 25.0% |
| !! | ATGAATTTTCCAAAAGGATT+GGG | + | chr2.4:26012760-26012779 | MS.gene063374:CDS | 25.0% |
| !! | ATTTTCAACCAAATTCGTTT+GGG | + | chr2.4:26014197-26014216 | MS.gene063374:intron | 25.0% |
| !! | CATATGAACAATAACTTTTC+AGG | - | chr2.4:26012290-26012309 | None:intergenic | 25.0% |
| !! | CATTGATTAAACTAGTACAT+TGG | + | chr2.4:26014397-26014416 | MS.gene063374:CDS | 25.0% |
| !!! | AGTTTATTGACTTGTCATTT+TGG | + | chr2.4:26013483-26013502 | MS.gene063374:intron | 25.0% |
| !!! | ATCCTTTTGGAAAATTCATT+TGG | - | chr2.4:26012759-26012778 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTGTTTTGTTGAG+GGG | - | chr2.4:26011141-26011160 | None:intergenic | 25.0% |
| !!! | GAAATAACAGATTGTTTTGT+TGG | + | chr2.4:26012927-26012946 | MS.gene063374:CDS | 25.0% |
| !!! | GTTTATTGACTTGTCATTTT+GGG | + | chr2.4:26013484-26013503 | MS.gene063374:intron | 25.0% |
| !!! | TATAAAGGTTGATATTAGCT+GGG | + | chr2.4:26014371-26014390 | MS.gene063374:CDS | 25.0% |
| !!! | TCCAATGTTGTCTTATTTTA+TGG | + | chr2.4:26012537-26012556 | MS.gene063374:CDS | 25.0% |
| !!! | TCCTTTTGGAAAATTCATTT+GGG | - | chr2.4:26012758-26012777 | None:intergenic | 25.0% |
| !!! | TGTCTTATTTTATGGTATGT+GGG | + | chr2.4:26012545-26012564 | MS.gene063374:CDS | 25.0% |
| !!! | TTATAAAGGTTGATATTAGC+TGG | + | chr2.4:26014370-26014389 | MS.gene063374:CDS | 25.0% |
| !!! | TTGTCTTATTTTATGGTATG+TGG | + | chr2.4:26012544-26012563 | MS.gene063374:CDS | 25.0% |
| AAAAGGATTGAGAACAACTA+TGG | + | chr2.4:26011529-26011548 | MS.gene063374:CDS | 30.0% | |
| AGAAATTTGCACAACATCAA+TGG | - | chr2.4:26012032-26012051 | None:intergenic | 30.0% | |
| AGATGAAGTAAGATTAAAGC+TGG | - | chr2.4:26013156-26013175 | None:intergenic | 30.0% | |
| AGTATTGTTTGGAAACTCAT+TGG | + | chr2.4:26014034-26014053 | MS.gene063374:intron | 30.0% | |
| AGTTCAACATCATTACAAAC+AGG | - | chr2.4:26011012-26011031 | None:intergenic | 30.0% | |
| ATGATACATCTTTGATACTG+TGG | - | chr2.4:26012366-26012385 | None:intergenic | 30.0% | |
| ATGGTTAAGTTCAATAGAAG+CGG | - | chr2.4:26014760-26014779 | None:intergenic | 30.0% | |
| ATTGGAGAAACAAATATCCA+TGG | + | chr2.4:26011702-26011721 | MS.gene063374:CDS | 30.0% | |
| ATTTCTACAAATGATTGTGC+AGG | + | chr2.4:26011256-26011275 | MS.gene063374:CDS | 30.0% | |
| CAATAGAAGCGGAATAAATA+AGG | - | chr2.4:26014749-26014768 | None:intergenic | 30.0% | |
| CAGTCATTCACAAGTTATAA+AGG | + | chr2.4:26014356-26014375 | MS.gene063374:intron | 30.0% | |
| GAAACAAATATCCATGGTAA+AGG | + | chr2.4:26011708-26011727 | MS.gene063374:CDS | 30.0% | |
| GATGAAGTAAGATTAAAGCT+GGG | - | chr2.4:26013155-26013174 | None:intergenic | 30.0% | |
| GTTCAACATCATTACAAACA+GGG | - | chr2.4:26011011-26011030 | None:intergenic | 30.0% | |
| GTTTATATCTTATCTTGACC+AGG | + | chr2.4:26013939-26013958 | MS.gene063374:intron | 30.0% | |
| TAGTCTAAGTAATTGACACA+AGG | - | chr2.4:26011166-26011185 | None:intergenic | 30.0% | |
| TCCTTCATATAGGCAATTAA+GGG | + | chr2.4:26014683-26014702 | MS.gene063374:CDS | 30.0% | |
| TCTATTGAACTTAACCATGA+AGG | + | chr2.4:26014762-26014781 | MS.gene063374:CDS | 30.0% | |
| TCTGGATGTGATTATTTACA+GGG | + | chr2.4:26013718-26013737 | MS.gene063374:CDS | 30.0% | |
| TCTTTGCCTATTATTTAAGC+TGG | + | chr2.4:26013868-26013887 | MS.gene063374:intron | 30.0% | |
| TGAGTTCCAGCTTAAATAAT+AGG | - | chr2.4:26013877-26013896 | None:intergenic | 30.0% | |
| TGCAAACTGTATTCCATAAA+AGG | + | chr2.4:26012478-26012497 | MS.gene063374:CDS | 30.0% | |
| TTGGAATATGTATATTTGGG+AGG | + | chr2.4:26013011-26013030 | MS.gene063374:CDS | 30.0% | |
| TTGTGGATGCAATTCAAAAA+TGG | + | chr2.4:26012073-26012092 | MS.gene063374:CDS | 30.0% | |
| ! | ACATTTCATAAAGATGGACT+TGG | - | chr2.4:26014122-26014141 | None:intergenic | 30.0% |
| ! | ATAGTTGTTCTCAATCCTTT+TGG | - | chr2.4:26011530-26011549 | None:intergenic | 30.0% |
| ! | ATGGATATTTGTTTCTCCAA+TGG | - | chr2.4:26011703-26011722 | None:intergenic | 30.0% |
| ! | GATGCTGATGATAATTTTCA+AGG | + | chr2.4:26012114-26012133 | MS.gene063374:CDS | 30.0% |
| ! | GATTGAATATTTTGTGGAGA+TGG | + | chr2.4:26010939-26010958 | MS.gene063374:CDS | 30.0% |
| ! | GATTTTCAACCAAATTCGTT+TGG | + | chr2.4:26014196-26014215 | MS.gene063374:intron | 30.0% |
| ! | TCCCAAATGAATTTTCCAAA+AGG | + | chr2.4:26012754-26012773 | MS.gene063374:CDS | 30.0% |
| ! | TGTTTTCAGAGATGTCATAA+TGG | + | chr2.4:26013606-26013625 | MS.gene063374:intron | 30.0% |
| ! | TTGATTTTTGATGAGAAGCA+AGG | + | chr2.4:26014174-26014193 | MS.gene063374:intron | 30.0% |
| ! | TTGTTGATGCCATAATTTGT+GGG | + | chr2.4:26011482-26011501 | MS.gene063374:CDS | 30.0% |
| !! | CAGCATCATTTTGATATATC+CGG | - | chr2.4:26012101-26012120 | None:intergenic | 30.0% |
| !! | GTCATTTTGGGTAAAGTTAA+CGG | + | chr2.4:26013496-26013515 | MS.gene063374:intron | 30.0% |
| !! | GTTAAAGACTGTTTTTCTTC+TGG | + | chr2.4:26012398-26012417 | MS.gene063374:CDS | 30.0% |
| !! | TGAAGCATTGATGTTATTGT+TGG | + | chr2.4:26012992-26013011 | MS.gene063374:CDS | 30.0% |
| !!! | ACAGCTGTTTTTCTATAAAC+TGG | - | chr2.4:26013452-26013471 | None:intergenic | 30.0% |
| !!! | GTCTTATTTTATGGTATGTG+GGG | + | chr2.4:26012546-26012565 | MS.gene063374:CDS | 30.0% |
| AAATGTGAAGCTGCAGAAAA+AGG | - | chr2.4:26012055-26012074 | None:intergenic | 35.0% | |
| AAATTCAAAGCAGTAGCACA+AGG | - | chr2.4:26010808-26010827 | None:intergenic | 35.0% | |
| AAGCTACTCAAGTATATGGA+AGG | - | chr2.4:26013309-26013328 | None:intergenic | 35.0% | |
| AAGGAAGCTACTCAAGTATA+TGG | - | chr2.4:26013313-26013332 | None:intergenic | 35.0% | |
| AAGGATATCCCAAACGAATT+TGG | - | chr2.4:26014208-26014227 | None:intergenic | 35.0% | |
| AATAACACCATGAACACTCA+CGG | - | chr2.4:26012844-26012863 | None:intergenic | 35.0% | |
| AATCTAACCCTCATGATGTT+CGG | + | chr2.4:26011288-26011307 | MS.gene063374:CDS | 35.0% | |
| ACAAATATCCATGGTAAAGG+AGG | + | chr2.4:26011711-26011730 | MS.gene063374:CDS | 35.0% | |
| ACCTCTCTACTAAATTGCAA+AGG | - | chr2.4:26012615-26012634 | None:intergenic | 35.0% | |
| ACTTTGTGAACATGCATATG+TGG | - | chr2.4:26013688-26013707 | None:intergenic | 35.0% | |
| AGATGTATCATAGAAAGCAG+AGG | + | chr2.4:26012375-26012394 | MS.gene063374:CDS | 35.0% | |
| ATAAGAGTTGCGTTTCTGAA+AGG | + | chr2.4:26013371-26013390 | MS.gene063374:intron | 35.0% | |
| ATCTTCATCACTCGTTTATC+AGG | - | chr2.4:26013824-26013843 | None:intergenic | 35.0% | |
| ATGAAGGTGAAAAACGCTTT+AGG | + | chr2.4:26014778-26014797 | MS.gene063374:CDS | 35.0% | |
| ATGCAATTCAAAAATGGTGC+CGG | + | chr2.4:26012079-26012098 | MS.gene063374:CDS | 35.0% | |
| ATTAAAACAGCCCTTGATAC+TGG | - | chr2.4:26012144-26012163 | None:intergenic | 35.0% | |
| ATTCAATTTGCAGCCATATG+TGG | + | chr2.4:26014491-26014510 | MS.gene063374:CDS | 35.0% | |
| CAAATATCCATGGTAAAGGA+GGG | + | chr2.4:26011712-26011731 | MS.gene063374:CDS | 35.0% | |
| CACAAAGTTATATTGCAGTC+TGG | + | chr2.4:26013700-26013719 | MS.gene063374:CDS | 35.0% | |
| CTAAAGCTGTACACATCTTT+AGG | + | chr2.4:26011090-26011109 | MS.gene063374:CDS | 35.0% | |
| CTCCAATGGCAAAACAATTT+CGG | - | chr2.4:26011689-26011708 | None:intergenic | 35.0% | |
| CTCCTTCATATAGGCAATTA+AGG | + | chr2.4:26014682-26014701 | MS.gene063374:CDS | 35.0% | |
| CTTCAAGTGTGTGTATACAT+TGG | + | chr2.4:26011918-26011937 | MS.gene063374:intron | 35.0% | |
| CTTGTTGATGCCATAATTTG+TGG | + | chr2.4:26011481-26011500 | MS.gene063374:CDS | 35.0% | |
| GATATGAAGTTCACTCTCAT+GGG | - | chr2.4:26011839-26011858 | None:intergenic | 35.0% | |
| GATGTATCATAGAAAGCAGA+GGG | + | chr2.4:26012376-26012395 | MS.gene063374:CDS | 35.0% | |
| GATTGGGAACTCTCTTAATA+AGG | + | chr2.4:26012776-26012795 | MS.gene063374:CDS | 35.0% | |
| GCAAAACAATTTCGGAAGAT+TGG | - | chr2.4:26011681-26011700 | None:intergenic | 35.0% | |
| GCAAAGGAATGTCTAGTAAA+AGG | - | chr2.4:26012599-26012618 | None:intergenic | 35.0% | |
| GTAAGATTAAAGCTGGGAAA+AGG | - | chr2.4:26013149-26013168 | None:intergenic | 35.0% | |
| GTCTGGATGTGATTATTTAC+AGG | + | chr2.4:26013717-26013736 | MS.gene063374:CDS | 35.0% | |
| GTTCGAAATATAAAAGACCG+CGG | + | chr2.4:26010907-26010926 | MS.gene063374:CDS | 35.0% | |
| TAATACAGATCTAGCATGTG+AGG | - | chr2.4:26012196-26012215 | None:intergenic | 35.0% | |
| TAGACAAGATCCAACAAACA+CGG | - | chr2.4:26010739-26010758 | None:intergenic | 35.0% | |
| TCAATTATCATGTTGCTCTG+AGG | + | chr2.4:26011743-26011762 | MS.gene063374:CDS | 35.0% | |
| TCCCTTAATTGCCTATATGA+AGG | - | chr2.4:26014687-26014706 | None:intergenic | 35.0% | |
| TCCTTTGCAATTTAGTAGAG+AGG | + | chr2.4:26012611-26012630 | MS.gene063374:CDS | 35.0% | |
| TCTGAAAGGACTGTTAAACT+TGG | + | chr2.4:26013385-26013404 | MS.gene063374:intron | 35.0% | |
| TCTGATATACTGAAGGTCAT+AGG | + | chr2.4:26012216-26012235 | MS.gene063374:CDS | 35.0% | |
| TCTTGATTCTTCTAAGCAGT+TGG | + | chr2.4:26014587-26014606 | MS.gene063374:CDS | 35.0% | |
| TGATATGAAGTTCACTCTCA+TGG | - | chr2.4:26011840-26011859 | None:intergenic | 35.0% | |
| TGGAATACAGTTTGCAAATG+AGG | - | chr2.4:26012474-26012493 | None:intergenic | 35.0% | |
| TGTAGCACAAAAGCTTATAG+AGG | + | chr2.4:26011223-26011242 | MS.gene063374:CDS | 35.0% | |
| ! | ATTAGTGGAAGCATGTAAGT+TGG | + | chr2.4:26011558-26011577 | MS.gene063374:CDS | 35.0% |
| ! | CAACTATGGTTCTGTATTAG+TGG | + | chr2.4:26011543-26011562 | MS.gene063374:CDS | 35.0% |
| ! | GCAATCATCATATCAGGTTT+TGG | + | chr2.4:26011602-26011621 | MS.gene063374:CDS | 35.0% |
| ! | TTGTGCTACTGCTTTGAATT+TGG | + | chr2.4:26010807-26010826 | MS.gene063374:CDS | 35.0% |
| ! | TTTTGAGCACAATTCTGTTG+AGG | + | chr2.4:26010968-26010987 | MS.gene063374:CDS | 35.0% |
| !! | AATTGAATTGGCTTGTTGGA+TGG | + | chr2.4:26013635-26013654 | MS.gene063374:CDS | 35.0% |
| !! | ATTGAATTGGCTTGTTGGAT+GGG | + | chr2.4:26013636-26013655 | MS.gene063374:CDS | 35.0% |
| !! | GCTAAATTGAATTGGCTTGT+TGG | + | chr2.4:26013631-26013650 | MS.gene063374:CDS | 35.0% |
| !! | TAAAGCGTTTTTCACCTTCA+TGG | - | chr2.4:26014779-26014798 | None:intergenic | 35.0% |
| !! | TTAAAAGTGATGGATTCGTG+TGG | + | chr2.4:26011451-26011470 | MS.gene063374:CDS | 35.0% |
| !! | TTCCGAAATTGTTTTGCCAT+TGG | + | chr2.4:26011684-26011703 | MS.gene063374:CDS | 35.0% |
| !!! | CATATCAGGTTTTGGAAACA+AGG | + | chr2.4:26011610-26011629 | MS.gene063374:CDS | 35.0% |
| !!! | CTGGATTTTGGAAAGTATTC+AGG | + | chr2.4:26014536-26014555 | MS.gene063374:CDS | 35.0% |
| !!! | GCTGGAAGTTATTTTTCGTA+TGG | + | chr2.4:26013185-26013204 | MS.gene063374:intron | 35.0% |
| !!! | TTCTCAATCCTTTTGGAACA+CGG | - | chr2.4:26011523-26011542 | None:intergenic | 35.0% |
| !!! | TTTTTGTTTTGTTGAGGGGA+AGG | - | chr2.4:26011137-26011156 | None:intergenic | 35.0% |
| AACAAACACGGTTGCAATAG+TGG | - | chr2.4:26010727-26010746 | None:intergenic | 40.0% | |
| ACCTGTTCTGTGGTTGATTA+AGG | + | chr2.4:26013971-26013990 | MS.gene063374:intron | 40.0% | |
| ACTATTGCAACCGTGTTTGT+TGG | + | chr2.4:26010726-26010745 | MS.gene063374:CDS | 40.0% | |
| ACTCTCATGGGTATAACTAC+AGG | - | chr2.4:26011827-26011846 | None:intergenic | 40.0% | |
| ACTTCATCTCTTGATTCAGC+TGG | + | chr2.4:26013167-26013186 | MS.gene063374:CDS | 40.0% | |
| AGTTAACAGAGCACAAGAGA+TGG | - | chr2.4:26014274-26014293 | None:intergenic | 40.0% | |
| CTACTAGATAGCACTTCTGA+AGG | - | chr2.4:26012894-26012913 | None:intergenic | 40.0% | |
| CTCTCATGGGTATAACTACA+GGG | - | chr2.4:26011826-26011845 | None:intergenic | 40.0% | |
| CTCTCTCATCCCACAAATTA+TGG | - | chr2.4:26011494-26011513 | None:intergenic | 40.0% | |
| CTTCCACAAAGAGAGCTTAT+AGG | - | chr2.4:26014634-26014653 | None:intergenic | 40.0% | |
| GAAACATACCATTTCACTCC+AGG | - | chr2.4:26012702-26012721 | None:intergenic | 40.0% | |
| GCACAAAAGCTTATAGAGGA+TGG | + | chr2.4:26011227-26011246 | MS.gene063374:CDS | 40.0% | |
| GCACAACATCAATGGAATGA+AGG | - | chr2.4:26012024-26012043 | None:intergenic | 40.0% | |
| TAACCCACAAACAACCAGAA+GGG | - | chr2.4:26014449-26014468 | None:intergenic | 40.0% | |
| TAAGCTCTCTTTGTGGAAGT+TGG | + | chr2.4:26014635-26014654 | MS.gene063374:CDS | 40.0% | |
| TATTCATGTAGAAAGGCCAG+AGG | + | chr2.4:26012443-26012462 | MS.gene063374:CDS | 40.0% | |
| TCAAGGTGAACCAGTATCAA+GGG | + | chr2.4:26012131-26012150 | MS.gene063374:CDS | 40.0% | |
| TCAGTGGTAGGAAGAAACTA+TGG | - | chr2.4:26011963-26011982 | None:intergenic | 40.0% | |
| TCTCATGGGTATAACTACAG+GGG | - | chr2.4:26011825-26011844 | None:intergenic | 40.0% | |
| TCTGAGTGCTACAAGTGAAA+AGG | + | chr2.4:26010840-26010859 | MS.gene063374:CDS | 40.0% | |
| TGAACATGCATATGTGGTAC+TGG | - | chr2.4:26013682-26013701 | None:intergenic | 40.0% | |
| TGCAACTTCTACTTGATGTG+AGG | - | chr2.4:26010782-26010801 | None:intergenic | 40.0% | |
| TGCGACTCATTGTAGCAAAT+GGG | + | chr2.4:26012814-26012833 | MS.gene063374:CDS | 40.0% | |
| TTAACCCACAAACAACCAGA+AGG | - | chr2.4:26014450-26014469 | None:intergenic | 40.0% | |
| TTCAAGGTGAACCAGTATCA+AGG | + | chr2.4:26012130-26012149 | MS.gene063374:CDS | 40.0% | |
| TTGCAGACAATCTCCAAAGT+GGG | + | chr2.4:26013118-26013137 | MS.gene063374:CDS | 40.0% | |
| TTGCGACTCATTGTAGCAAA+TGG | + | chr2.4:26012813-26012832 | MS.gene063374:CDS | 40.0% | |
| TTTCTGCAGCTTCACATTTG+TGG | + | chr2.4:26012056-26012075 | MS.gene063374:intron | 40.0% | |
| TTTGCAGACAATCTCCAAAG+TGG | + | chr2.4:26013117-26013136 | MS.gene063374:CDS | 40.0% | |
| ! | AAAGTATTCAGGAAGCTTGC+TGG | + | chr2.4:26014547-26014566 | MS.gene063374:CDS | 40.0% |
| ! | AAGAGAGTTCCCAATCCTTT+TGG | - | chr2.4:26012772-26012791 | None:intergenic | 40.0% |
| ! | ACTTACTGATTACGTGTGCA+TGG | + | chr2.4:26011860-26011879 | MS.gene063374:CDS | 40.0% |
| ! | AGTTGGCTCAAATTACTCGT+TGG | + | chr2.4:26011575-26011594 | MS.gene063374:CDS | 40.0% |
| ! | GTTGGCTCAAATTACTCGTT+GGG | + | chr2.4:26011576-26011595 | MS.gene063374:CDS | 40.0% |
| ! | TCCAGCAACAAGACCTTTTA+TGG | - | chr2.4:26012494-26012513 | None:intergenic | 40.0% |
| ! | TGGTTGTTTGTGGGTTAACA+TGG | + | chr2.4:26014452-26014471 | MS.gene063374:CDS | 40.0% |
| ! | TTACAGGGTTTGTTCAGATC+AGG | + | chr2.4:26013733-26013752 | MS.gene063374:CDS | 40.0% |
| !! | AAAAGGTCTTGTTGCTGGAT+TGG | + | chr2.4:26012495-26012514 | MS.gene063374:CDS | 40.0% |
| !! | TCCATAAAAGGTCTTGTTGC+TGG | + | chr2.4:26012490-26012509 | MS.gene063374:CDS | 40.0% |
| !! | TCTTGTTGCTGGATTGGTAA+AGG | + | chr2.4:26012501-26012520 | MS.gene063374:CDS | 40.0% |
| AAACAACCAGAAGGGGGATT+TGG | - | chr2.4:26014441-26014460 | None:intergenic | 45.0% | |
| AACCCACAAACAACCAGAAG+GGG | - | chr2.4:26014448-26014467 | None:intergenic | 45.0% | |
| ACAAATGATTGTGCAGGCGA+TGG | + | chr2.4:26011262-26011281 | MS.gene063374:CDS | 45.0% | |
| AGAACAGGTTACATAGACCC+TGG | - | chr2.4:26013960-26013979 | None:intergenic | 45.0% | |
| AGAATTGGCTGAAAGCTAGC+TGG | + | chr2.4:26014094-26014113 | MS.gene063374:intron | 45.0% | |
| AGCCAACAAAGCTCCACATA+TGG | - | chr2.4:26014507-26014526 | None:intergenic | 45.0% | |
| AGTTATGTGTGGGACGTTCT+TGG | + | chr2.4:26011766-26011785 | MS.gene063374:CDS | 45.0% | |
| ATGTTCGGATAGAGGGGTTT+CGG | + | chr2.4:26011303-26011322 | MS.gene063374:CDS | 45.0% | |
| ATTCAATCTTCTGTGCACCG+CGG | - | chr2.4:26010927-26010946 | None:intergenic | 45.0% | |
| ATTGGTAAAGGAGACTGGGA+AGG | + | chr2.4:26012513-26012532 | MS.gene063374:CDS | 45.0% | |
| ATTTGTGGGATGAGAGAGAC+AGG | + | chr2.4:26011496-26011515 | MS.gene063374:CDS | 45.0% | |
| CAAACAGGGAACCTAGATGA+AGG | - | chr2.4:26010997-26011016 | None:intergenic | 45.0% | |
| CAAATGATTGTGCAGGCGAT+GGG | + | chr2.4:26011263-26011282 | MS.gene063374:CDS | 45.0% | |
| CCTCATGATGTTCGGATAGA+GGG | + | chr2.4:26011296-26011315 | MS.gene063374:CDS | 45.0% | |
| CCTCTATCCGAACATCATGA+GGG | - | chr2.4:26011298-26011317 | None:intergenic | 45.0% | |
| CTCATGATGTTCGGATAGAG+GGG | + | chr2.4:26011297-26011316 | MS.gene063374:CDS | 45.0% | |
| CTTTCAGTCCTGGAGTGAAA+TGG | + | chr2.4:26012691-26012710 | MS.gene063374:CDS | 45.0% | |
| GCCTTAATCAACCACAGAAC+AGG | - | chr2.4:26013975-26013994 | None:intergenic | 45.0% | |
| GCGACTCATTGTAGCAAATG+GGG | + | chr2.4:26012815-26012834 | MS.gene063374:CDS | 45.0% | |
| GGGTGGCTTACAATTCATTG+TGG | + | chr2.4:26011787-26011806 | MS.gene063374:CDS | 45.0% | |
| GGTCTATGTAACCTGTTCTG+TGG | + | chr2.4:26013961-26013980 | MS.gene063374:intron | 45.0% | |
| GTTATGTGTGGGACGTTCTT+GGG | + | chr2.4:26011767-26011786 | MS.gene063374:CDS | 45.0% | |
| GTTGAGGGGAAGGTAAAAGA+TGG | - | chr2.4:26011127-26011146 | None:intergenic | 45.0% | |
| TACTTGATGTGAGGACAGCA+AGG | - | chr2.4:26010773-26010792 | None:intergenic | 45.0% | |
| TCAGATCAGGAATGCAAGAG+AGG | + | chr2.4:26013746-26013765 | MS.gene063374:CDS | 45.0% | |
| TGAGCACAATTCTGTTGAGG+TGG | + | chr2.4:26010971-26010990 | MS.gene063374:CDS | 45.0% | |
| TGCAGACAATCTCCAAAGTG+GGG | + | chr2.4:26013119-26013138 | MS.gene063374:CDS | 45.0% | |
| TGGCCTATAAGCTCTCTTTG+TGG | + | chr2.4:26014628-26014647 | MS.gene063374:CDS | 45.0% | |
| TTTCACTCCAGGACTGAAAG+AGG | - | chr2.4:26012691-26012710 | None:intergenic | 45.0% | |
| TTTCAGTCCCTCCTTTACCA+TGG | - | chr2.4:26011722-26011741 | None:intergenic | 45.0% | |
| TTTGTGGGATGAGAGAGACA+GGG | + | chr2.4:26011497-26011516 | MS.gene063374:CDS | 45.0% | |
| ! | ACTTCTGAAGGTAGAAGTGC+TGG | - | chr2.4:26012882-26012901 | None:intergenic | 45.0% |
| ! | AGCCATATGTGGAGCTTTGT+TGG | + | chr2.4:26014502-26014521 | MS.gene063374:CDS | 45.0% |
| ! | CTGCAAAGCATTTGCAAGAG+AGG | - | chr2.4:26013104-26013123 | None:intergenic | 45.0% |
| ! | TCGGCTTGCTCAATGTCTAT+TGG | + | chr2.4:26011322-26011341 | MS.gene063374:CDS | 45.0% |
| !! | CTGGATTGGTAAAGGAGACT+GGG | + | chr2.4:26012509-26012528 | MS.gene063374:CDS | 45.0% |
| !! | TATGTGGAGCTTTGTTGGCT+TGG | + | chr2.4:26014507-26014526 | MS.gene063374:CDS | 45.0% |
| !! | TGCTCTGAGGAGTTATGTGT+GGG | + | chr2.4:26011756-26011775 | MS.gene063374:CDS | 45.0% |
| !! | TTGCTCTGAGGAGTTATGTG+TGG | + | chr2.4:26011755-26011774 | MS.gene063374:CDS | 45.0% |
| !! | TTTGTTGGCTTGGTGAGTTC+TGG | + | chr2.4:26014517-26014536 | MS.gene063374:CDS | 45.0% |
| !!! | GCTTGGTGAGTTCTGGATTT+TGG | + | chr2.4:26014524-26014543 | MS.gene063374:CDS | 45.0% |
| ACCCACAAACAACCAGAAGG+GGG | - | chr2.4:26014447-26014466 | None:intergenic | 50.0% | |
| AGGGGGATTTGGAAGCTCAT+CGG | - | chr2.4:26014430-26014449 | None:intergenic | 50.0% | |
| AGTAGCACCTCTTTCAGTCC+TGG | + | chr2.4:26012681-26012700 | MS.gene063374:CDS | 50.0% | |
| CCCTCATGATGTTCGGATAG+AGG | + | chr2.4:26011295-26011314 | MS.gene063374:CDS | 50.0% | |
| CCCTCTATCCGAACATCATG+AGG | - | chr2.4:26011299-26011318 | None:intergenic | 50.0% | |
| GCTCAAATTACTCGTTGGGC+TGG | + | chr2.4:26011580-26011599 | MS.gene063374:CDS | 50.0% | |
| TGCAAATGAGGAGCAACCTC+TGG | - | chr2.4:26012462-26012481 | None:intergenic | 50.0% | |
| TGTTGAGGTGGCCTTCATCT+AGG | + | chr2.4:26010983-26011002 | MS.gene063374:CDS | 50.0% | |
| ! | ATCCCCCTTCTGGTTGTTTG+TGG | + | chr2.4:26014442-26014461 | MS.gene063374:CDS | 50.0% |
| ! | GGGCTGGCAATCATCATATC+AGG | + | chr2.4:26011596-26011615 | MS.gene063374:CDS | 50.0% |
| ! | TCCCCCTTCTGGTTGTTTGT+GGG | + | chr2.4:26014443-26014462 | MS.gene063374:CDS | 50.0% |
| !! | CACGGTTGCAATAGTGGACT+CGG | - | chr2.4:26010721-26010740 | None:intergenic | 50.0% |
| !! | GCTGGATTGGTAAAGGAGAC+TGG | + | chr2.4:26012508-26012527 | MS.gene063374:CDS | 50.0% |
| AGACAGGGCCGTGTTCCAAA+AGG | + | chr2.4:26011512-26011531 | MS.gene063374:CDS | 55.0% | |
| ATGTGTGGGACGTTCTTGGG+TGG | + | chr2.4:26011770-26011789 | MS.gene063374:CDS | 55.0% | |
| GAGCTTCCAAATCCCCCTTC+TGG | + | chr2.4:26014432-26014451 | MS.gene063374:CDS | 55.0% | |
| GGGGATTCCGTGAGTGTTCA+TGG | + | chr2.4:26012834-26012853 | MS.gene063374:CDS | 55.0% | |
| ! | GGAAAAGGTGTGCCCCACTT+TGG | - | chr2.4:26013134-26013153 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 26010679 | 26014803 | 26010679 | ID=MS.gene063374 |
| chr2.4 | mRNA | 26010679 | 26014803 | 26010679 | ID=MS.gene063374.t1;Parent=MS.gene063374 |
| chr2.4 | exon | 26010679 | 26011111 | 26010679 | ID=MS.gene063374.t1.exon1;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26010679 | 26011111 | 26010679 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| chr2.4 | exon | 26011210 | 26011343 | 26011210 | ID=MS.gene063374.t1.exon2;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26011210 | 26011343 | 26011210 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| chr2.4 | exon | 26011433 | 26011881 | 26011433 | ID=MS.gene063374.t1.exon3;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26011433 | 26011881 | 26011433 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| chr2.4 | exon | 26012065 | 26013201 | 26012065 | ID=MS.gene063374.t1.exon4;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26012065 | 26013201 | 26012065 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| chr2.4 | exon | 26013615 | 26013767 | 26013615 | ID=MS.gene063374.t1.exon5;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26013615 | 26013767 | 26013615 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| chr2.4 | exon | 26014359 | 26014803 | 26014359 | ID=MS.gene063374.t1.exon6;Parent=MS.gene063374.t1 |
| chr2.4 | CDS | 26014359 | 26014803 | 26014359 | ID=cds.MS.gene063374.t1;Parent=MS.gene063374.t1 |
| Gene Sequence |
| Protein sequence |
