Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063573.t1 | XP_013441774.1 | 91.6 | 371 | 14 | 1 | 1 | 354 | 1 | 371 | 2.20E-195 | 691.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063573.t1 | Q9LW62 | 79.8 | 327 | 63 | 2 | 1 | 326 | 1 | 325 | 6.6e-153 | 541.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063573.t1 | A0A072TET6 | 91.6 | 371 | 14 | 1 | 1 | 354 | 1 | 371 | 1.6e-195 | 691.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063573.t1 | MTR_0492s0030 | 91.644 | 371 | 14 | 1 | 1 | 354 | 1 | 371 | 0.0 | 689 |
| MS.gene063573.t1 | MTR_0543s0020 | 91.644 | 371 | 14 | 1 | 1 | 354 | 1 | 371 | 0.0 | 689 |
| MS.gene063573.t1 | MTR_1g042280 | 77.568 | 370 | 64 | 3 | 1 | 354 | 2 | 368 | 0.0 | 583 |
| MS.gene063573.t1 | MTR_1g075870 | 74.309 | 362 | 70 | 3 | 1 | 341 | 2 | 361 | 0.0 | 548 |
| MS.gene063573.t1 | MTR_1g075870 | 79.205 | 327 | 66 | 1 | 1 | 327 | 2 | 326 | 0.0 | 540 |
| MS.gene063573.t1 | MTR_7g097160 | 70.933 | 375 | 84 | 6 | 1 | 352 | 1 | 373 | 0.0 | 523 |
| MS.gene063573.t1 | MTR_1g069720 | 79.672 | 305 | 60 | 1 | 1 | 305 | 1 | 303 | 0.0 | 515 |
| MS.gene063573.t1 | MTR_1g042280 | 84.429 | 289 | 43 | 1 | 40 | 328 | 9 | 295 | 0.0 | 505 |
| MS.gene063573.t1 | MTR_4g126010 | 68.976 | 332 | 97 | 2 | 1 | 328 | 1 | 330 | 8.18e-173 | 488 |
| MS.gene063573.t1 | MTR_2g099670 | 68.155 | 336 | 101 | 2 | 1 | 332 | 1 | 334 | 7.20e-172 | 487 |
| MS.gene063573.t1 | MTR_8g018310 | 70.755 | 318 | 88 | 3 | 1 | 318 | 1 | 313 | 1.73e-168 | 478 |
| MS.gene063573.t1 | MTR_8g018310 | 65.527 | 351 | 113 | 4 | 1 | 351 | 1 | 343 | 4.67e-167 | 472 |
| MS.gene063573.t1 | MTR_1g075870 | 79.705 | 271 | 53 | 1 | 58 | 328 | 2 | 270 | 4.19e-163 | 457 |
| MS.gene063573.t1 | MTR_6g087070 | 69.329 | 313 | 93 | 2 | 1 | 313 | 1 | 310 | 5.83e-162 | 460 |
| MS.gene063573.t1 | MTR_2g039930 | 63.450 | 342 | 107 | 3 | 1 | 332 | 1 | 334 | 5.83e-162 | 461 |
| MS.gene063573.t1 | MTR_8g102930 | 62.465 | 357 | 115 | 4 | 1 | 343 | 1 | 352 | 6.88e-161 | 457 |
| MS.gene063573.t1 | MTR_3g110180 | 61.047 | 344 | 111 | 3 | 1 | 331 | 1 | 334 | 5.78e-152 | 434 |
| MS.gene063573.t1 | MTR_3g110180 | 61.047 | 344 | 110 | 4 | 1 | 331 | 1 | 333 | 2.12e-150 | 431 |
| MS.gene063573.t1 | MTR_1g004990 | 61.981 | 313 | 117 | 1 | 1 | 313 | 1 | 311 | 7.54e-145 | 416 |
| MS.gene063573.t1 | MTR_2g099670 | 67.273 | 275 | 84 | 2 | 62 | 332 | 10 | 282 | 3.35e-135 | 392 |
| MS.gene063573.t1 | MTR_2g039930 | 62.835 | 261 | 79 | 3 | 82 | 332 | 1 | 253 | 5.60e-117 | 344 |
| MS.gene063573.t1 | MTR_7g097160 | 64.655 | 232 | 57 | 6 | 144 | 352 | 25 | 254 | 4.34e-92 | 279 |
| MS.gene063573.t1 | MTR_7g006030 | 36.860 | 293 | 164 | 6 | 3 | 279 | 29 | 316 | 7.60e-55 | 189 |
| MS.gene063573.t1 | MTR_3g110240 | 38.163 | 283 | 160 | 6 | 3 | 275 | 113 | 390 | 6.06e-54 | 188 |
| MS.gene063573.t1 | MTR_7g085540 | 36.620 | 284 | 162 | 5 | 9 | 279 | 147 | 425 | 3.03e-52 | 184 |
| MS.gene063573.t1 | MTR_1g007150 | 36.396 | 283 | 165 | 6 | 3 | 275 | 116 | 393 | 5.45e-52 | 183 |
| MS.gene063573.t1 | MTR_1g116210 | 36.268 | 284 | 165 | 6 | 3 | 275 | 111 | 389 | 1.86e-51 | 181 |
| MS.gene063573.t1 | MTR_8g014050 | 35.915 | 284 | 158 | 7 | 9 | 275 | 128 | 404 | 2.73e-47 | 170 |
| MS.gene063573.t1 | MTR_7g116400 | 52.128 | 94 | 38 | 3 | 80 | 172 | 1 | 88 | 1.05e-21 | 88.6 |
| MS.gene063573.t1 | MTR_5g022030 | 27.434 | 226 | 144 | 6 | 8 | 224 | 98 | 312 | 1.19e-14 | 75.5 |
| MS.gene063573.t1 | MTR_5g022030 | 27.434 | 226 | 144 | 6 | 8 | 224 | 98 | 312 | 1.21e-14 | 75.5 |
| MS.gene063573.t1 | MTR_5g007590 | 45.588 | 68 | 29 | 1 | 72 | 139 | 54 | 113 | 1.36e-12 | 64.7 |
| MS.gene063573.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 8.05e-12 | 65.9 |
| MS.gene063573.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 8.71e-12 | 66.2 |
| MS.gene063573.t1 | MTR_8g079790 | 27.948 | 229 | 126 | 8 | 6 | 213 | 122 | 332 | 8.84e-12 | 66.6 |
| MS.gene063573.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 73 | 298 | 9.09e-12 | 66.2 |
| MS.gene063573.t1 | MTR_3g109390 | 25.217 | 230 | 147 | 7 | 8 | 216 | 51 | 276 | 1.15e-11 | 65.9 |
| MS.gene063573.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 1.92e-11 | 65.5 |
| MS.gene063573.t1 | MTR_3g076540 | 24.896 | 241 | 141 | 7 | 5 | 216 | 90 | 319 | 2.24e-11 | 65.1 |
| MS.gene063573.t1 | MTR_3g076540 | 24.896 | 241 | 141 | 7 | 5 | 216 | 8 | 237 | 2.54e-11 | 64.7 |
| MS.gene063573.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 3.22e-11 | 64.7 |
| MS.gene063573.t1 | MTR_5g092810 | 26.126 | 222 | 142 | 6 | 9 | 221 | 92 | 300 | 4.07e-11 | 64.7 |
| MS.gene063573.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 4.38e-11 | 64.3 |
| MS.gene063573.t1 | MTR_3g092230 | 27.313 | 227 | 127 | 9 | 6 | 213 | 135 | 342 | 4.65e-11 | 64.3 |
| MS.gene063573.t1 | MTR_7g106710 | 26.728 | 217 | 137 | 8 | 9 | 216 | 135 | 338 | 5.79e-11 | 64.3 |
| MS.gene063573.t1 | MTR_4g128820 | 26.697 | 221 | 138 | 6 | 7 | 218 | 8 | 213 | 8.36e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063573.t1 | AT3G23340 | 79.817 | 327 | 63 | 2 | 1 | 326 | 1 | 325 | 0.0 | 543 |
| MS.gene063573.t1 | AT4G14340 | 68.984 | 374 | 92 | 4 | 1 | 352 | 7 | 378 | 0.0 | 526 |
| MS.gene063573.t1 | AT4G14340 | 75.380 | 329 | 78 | 2 | 1 | 328 | 7 | 333 | 0.0 | 518 |
| MS.gene063573.t1 | AT1G03930 | 74.030 | 335 | 79 | 2 | 1 | 329 | 1 | 333 | 0.0 | 517 |
| MS.gene063573.t1 | AT3G23340 | 76.758 | 327 | 59 | 3 | 1 | 326 | 1 | 311 | 0.0 | 512 |
| MS.gene063573.t1 | AT5G44100 | 74.328 | 335 | 77 | 3 | 1 | 329 | 1 | 332 | 0.0 | 510 |
| MS.gene063573.t1 | AT5G44100 | 74.328 | 335 | 77 | 3 | 1 | 329 | 1 | 332 | 0.0 | 510 |
| MS.gene063573.t1 | AT4G28540 | 73.333 | 330 | 81 | 2 | 1 | 325 | 5 | 332 | 1.82e-180 | 509 |
| MS.gene063573.t1 | AT5G43320 | 72.886 | 343 | 85 | 4 | 1 | 337 | 1 | 341 | 2.82e-179 | 506 |
| MS.gene063573.t1 | AT5G43320 | 73.810 | 336 | 81 | 3 | 1 | 331 | 1 | 334 | 3.38e-178 | 499 |
| MS.gene063573.t1 | AT5G43320 | 73.810 | 336 | 81 | 3 | 1 | 331 | 1 | 334 | 3.38e-178 | 499 |
| MS.gene063573.t1 | AT1G04440 | 67.027 | 370 | 95 | 5 | 1 | 349 | 1 | 364 | 8.18e-178 | 502 |
| MS.gene063573.t1 | AT4G26100 | 67.560 | 336 | 103 | 2 | 1 | 332 | 1 | 334 | 1.18e-171 | 485 |
| MS.gene063573.t1 | AT2G19470 | 67.449 | 341 | 97 | 3 | 1 | 331 | 1 | 337 | 2.39e-170 | 481 |
| MS.gene063573.t1 | AT1G72710 | 68.373 | 332 | 98 | 3 | 1 | 328 | 1 | 329 | 1.53e-169 | 481 |
| MS.gene063573.t1 | AT5G57015 | 70.347 | 317 | 91 | 2 | 1 | 316 | 1 | 315 | 9.69e-168 | 475 |
| MS.gene063573.t1 | AT4G28880 | 67.097 | 310 | 100 | 1 | 1 | 310 | 1 | 308 | 5.52e-157 | 447 |
| MS.gene063573.t1 | AT4G28880 | 67.097 | 310 | 100 | 1 | 1 | 310 | 1 | 308 | 5.52e-157 | 447 |
| MS.gene063573.t1 | AT4G28880 | 67.097 | 310 | 100 | 1 | 1 | 310 | 1 | 308 | 5.52e-157 | 447 |
| MS.gene063573.t1 | AT4G28880 | 67.097 | 310 | 100 | 1 | 1 | 310 | 1 | 308 | 5.52e-157 | 447 |
| MS.gene063573.t1 | AT4G28860 | 60.227 | 352 | 133 | 2 | 1 | 352 | 1 | 345 | 1.83e-156 | 444 |
| MS.gene063573.t1 | AT4G28860 | 66.452 | 310 | 102 | 1 | 1 | 310 | 1 | 308 | 4.79e-156 | 444 |
| MS.gene063573.t1 | AT4G08800 | 62.081 | 298 | 79 | 3 | 1 | 298 | 1 | 264 | 6.33e-133 | 381 |
| MS.gene063573.t1 | AT2G25760 | 39.362 | 282 | 154 | 6 | 9 | 275 | 107 | 386 | 7.06e-56 | 193 |
| MS.gene063573.t1 | AT2G25760 | 39.007 | 282 | 152 | 5 | 9 | 275 | 107 | 383 | 1.87e-55 | 192 |
| MS.gene063573.t1 | AT3G13670 | 35.495 | 293 | 168 | 6 | 3 | 279 | 129 | 416 | 7.48e-52 | 183 |
| MS.gene063573.t1 | AT3G03940 | 35.915 | 284 | 164 | 5 | 9 | 279 | 140 | 418 | 1.04e-50 | 180 |
| MS.gene063573.t1 | AT5G18190 | 35.563 | 284 | 165 | 5 | 9 | 279 | 130 | 408 | 1.15e-50 | 179 |
| MS.gene063573.t1 | AT5G18190 | 35.563 | 284 | 165 | 5 | 9 | 279 | 130 | 408 | 1.15e-50 | 179 |
| MS.gene063573.t1 | AT2G17890 | 26.339 | 224 | 149 | 6 | 8 | 224 | 107 | 321 | 1.82e-13 | 72.0 |
| MS.gene063573.t1 | AT3G50530 | 27.556 | 225 | 129 | 6 | 6 | 213 | 145 | 352 | 3.55e-13 | 70.9 |
| MS.gene063573.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.33e-12 | 68.2 |
| MS.gene063573.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.33e-12 | 68.2 |
| MS.gene063573.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 114 | 342 | 2.33e-12 | 68.2 |
| MS.gene063573.t1 | AT3G50530 | 26.210 | 248 | 134 | 8 | 6 | 213 | 145 | 383 | 2.59e-12 | 68.6 |
| MS.gene063573.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 100 | 328 | 2.62e-12 | 68.2 |
| MS.gene063573.t1 | AT3G53570 | 26.724 | 232 | 144 | 6 | 8 | 216 | 100 | 328 | 2.62e-12 | 68.2 |
| MS.gene063573.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 70 | 295 | 3.69e-12 | 67.0 |
| MS.gene063573.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 62 | 287 | 4.21e-12 | 67.4 |
| MS.gene063573.t1 | AT4G32660 | 26.778 | 239 | 132 | 7 | 8 | 216 | 70 | 295 | 4.53e-12 | 67.0 |
| MS.gene063573.t1 | AT5G39440 | 28.319 | 226 | 139 | 6 | 9 | 226 | 19 | 229 | 3.29e-11 | 64.7 |
| MS.gene063573.t1 | AT3G49370 | 26.923 | 234 | 133 | 9 | 7 | 221 | 140 | 354 | 4.85e-11 | 64.3 |
Find 76 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCATTTGGGGAGCTTTATT+TGG | 0.240792 | 1.3:+25470276 | MS.gene063573:CDS |
| CTAAATATTGGTACCTCTAT+TGG | 0.252438 | 1.3:-25472970 | None:intergenic |
| GTGATGGCTGTTGACCTTCT+TGG | 0.294544 | 1.3:+25471566 | MS.gene063573:CDS |
| ATATCTTAAGAAACTCTTTC+GGG | 0.305643 | 1.3:+25473247 | MS.gene063573:CDS |
| GTTATGATGGATATTGTTAT+TGG | 0.306877 | 1.3:+25470217 | None:intergenic |
| TTCAAGCTTGGCAGCAAACT+TGG | 0.307902 | 1.3:+25470247 | MS.gene063573:CDS |
| CATATCTTAAGAAACTCTTT+CGG | 0.313975 | 1.3:+25473246 | MS.gene063573:CDS |
| GCATTTGGGGAGCTTTATTT+GGG | 0.341011 | 1.3:+25470277 | MS.gene063573:CDS |
| AGTTTGACTTTGTATTTGAT+TGG | 0.343555 | 1.3:+25473389 | MS.gene063573:CDS |
| TTTAAGACTGGTTTCACATT+TGG | 0.346834 | 1.3:-25473546 | None:intergenic |
| AAACTTGGGAGTGGAGCATT+TGG | 0.356250 | 1.3:+25470262 | MS.gene063573:CDS |
| TTCTTAAGATATGAATAATC+AGG | 0.358182 | 1.3:-25473236 | None:intergenic |
| TTTAACACTCACCTTGGAAT+TGG | 0.359788 | 1.3:+25472600 | MS.gene063573:CDS |
| AACTTGGGAGTGGAGCATTT+GGG | 0.378231 | 1.3:+25470263 | MS.gene063573:CDS |
| AGAAGAAATATGAATGGATA+AGG | 0.378535 | 1.3:+25472929 | MS.gene063573:CDS |
| TCAGGAAGAAATAATGGCTC+TGG | 0.388829 | 1.3:+25473882 | MS.gene063573:intron |
| AAAGCCCGAGAACTTTCTAA+TGG | 0.388867 | 1.3:+25471818 | MS.gene063573:CDS |
| TGTATGAGTCTAAATTGTAT+AGG | 0.392182 | 1.3:+25471272 | MS.gene063573:CDS |
| CAGACTGCAGCATAGGTCTT+TGG | 0.407190 | 1.3:+25473908 | MS.gene063573:CDS |
| CAGGTGTACATTATTGACTA+TGG | 0.410304 | 1.3:+25472225 | MS.gene063573:intron |
| GAGAACTTTCTAATGGGTTC+AGG | 0.413955 | 1.3:+25471825 | MS.gene063573:CDS |
| AGAGGAAGTGGCTCTTAAAC+TGG | 0.426091 | 1.3:+25470398 | MS.gene063573:CDS |
| TATGGTCCTGTGTTTAAGAC+TGG | 0.431845 | 1.3:-25473558 | None:intergenic |
| GTTATAGTCTTCCATGGCAT+GGG | 0.446603 | 1.3:+25472881 | MS.gene063573:intron |
| TTAGAACTGGAACCACTTTG+TGG | 0.457776 | 1.3:-25473427 | None:intergenic |
| AGGGAAAACAAGAATCTCAT+TGG | 0.467420 | 1.3:+25472558 | MS.gene063573:intron |
| AAGCCCGAGAACTTTCTAAT+GGG | 0.468302 | 1.3:+25471819 | MS.gene063573:CDS |
| CGTTCTAATCTCTCTTCATA+TGG | 0.470694 | 1.3:-25473576 | None:intergenic |
| TGAACCCATTAGAAAGTTCT+CGG | 0.471922 | 1.3:-25471823 | None:intergenic |
| ATTTGATTGGACTAAATTGA+AGG | 0.475067 | 1.3:+25473402 | MS.gene063573:CDS |
| ACCGCAATGATCGACAATAG+TGG | 0.481921 | 1.3:-25473202 | None:intergenic |
| TGTTATAGTCTTCCATGGCA+TGG | 0.485138 | 1.3:+25472880 | MS.gene063573:intron |
| GAAGAAATATGAATGGATAA+GGG | 0.486661 | 1.3:+25472930 | MS.gene063573:CDS |
| TTATATATTATGTACCTGTA+TGG | 0.490253 | 1.3:-25472291 | None:intergenic |
| ACTCCATACCACTTTATATG+AGG | 0.493402 | 1.3:-25471527 | None:intergenic |
| TTAAATAAGTCTTCAAGACT+TGG | 0.494574 | 1.3:-25471590 | None:intergenic |
| TTCAGGCAGCAAGATAAATC+AGG | 0.499327 | 1.3:+25471842 | MS.gene063573:CDS |
| CAGGAAGAAATAATGGCTCT+GGG | 0.501297 | 1.3:+25473883 | MS.gene063573:intron |
| CCACTTTATATGAGGTATGC+CGG | 0.507981 | 1.3:-25471519 | None:intergenic |
| CGGGAACTATTCATTAGAGA+AGG | 0.512534 | 1.3:+25473266 | MS.gene063573:CDS |
| AAAGAAGCTAACTCCAATAG+AGG | 0.515041 | 1.3:+25472957 | MS.gene063573:CDS |
| ATGATGGATATTGTTATTGG+TGG | 0.521288 | 1.3:+25470220 | None:intergenic |
| CACAAAGGCACATACCATAC+AGG | 0.527052 | 1.3:+25472277 | MS.gene063573:CDS |
| GAGAGATTAGAACGGCCTAC+AGG | 0.527482 | 1.3:+25473585 | MS.gene063573:CDS |
| AAATTGTATAGGCTTCTTCA+AGG | 0.528424 | 1.3:+25471283 | MS.gene063573:CDS |
| AGCTATACTTACTAGTTGAT+CGG | 0.530567 | 1.3:-25471657 | None:intergenic |
| CTGGGGACAGACTGCAGCAT+AGG | 0.535067 | 1.3:+25473901 | MS.gene063573:CDS |
| TCAAGCTTGGCAGCAAACTT+GGG | 0.536290 | 1.3:+25470248 | MS.gene063573:CDS |
| CTAAAGAGAAGAAATATGAA+TGG | 0.541076 | 1.3:+25472923 | MS.gene063573:CDS |
| ATTGGTGGAAAATTCAAGCT+TGG | 0.542077 | 1.3:+25470235 | MS.gene063573:CDS |
| CTTCAAGACTTGGTCCAAGA+AGG | 0.548592 | 1.3:-25471580 | None:intergenic |
| TGTGAAAACTCAAGAGGAAG+TGG | 0.550394 | 1.3:+25470386 | MS.gene063573:CDS |
| TGCACAAATTACCAATTCCA+AGG | 0.554278 | 1.3:-25472611 | None:intergenic |
| TTCATGCCGTGCCCATGCCA+TGG | 0.555518 | 1.3:-25472892 | None:intergenic |
| CTTGGCAGCAAACTTGGGAG+TGG | 0.558158 | 1.3:+25470253 | MS.gene063573:CDS |
| ATACCTCATATAAAGTGGTA+TGG | 0.563349 | 1.3:+25471524 | MS.gene063573:CDS |
| GAACCCATTAGAAAGTTCTC+GGG | 0.565868 | 1.3:-25471822 | None:intergenic |
| CCGGCATACCTCATATAAAG+TGG | 0.567709 | 1.3:+25471519 | MS.gene063573:CDS |
| AAATATGACGCGAACTCTGT+TGG | 0.571147 | 1.3:-25473179 | None:intergenic |
| TTAGACTCATACAGAAGTTG+AGG | 0.573846 | 1.3:-25471262 | None:intergenic |
| AGAGATGATCTAGAATCGCT+TGG | 0.574171 | 1.3:+25472754 | MS.gene063573:CDS |
| ACTTGGGAGTGGAGCATTTG+GGG | 0.577875 | 1.3:+25470264 | MS.gene063573:CDS |
| TATAAAGTGGTATGGAGTCG+AGG | 0.580298 | 1.3:+25471532 | MS.gene063573:CDS |
| AGTCTTCCATGGCATGGGCA+CGG | 0.583186 | 1.3:+25472886 | MS.gene063573:intron |
| GTGAAACCAGTCTTAAACAC+AGG | 0.585633 | 1.3:+25473552 | MS.gene063573:CDS |
| AATCATGGAAGAACATCTGA+AGG | 0.597406 | 1.3:-25473948 | None:intergenic |
| TCCACTATTGTCGATCATTG+CGG | 0.598884 | 1.3:+25473201 | MS.gene063573:CDS |
| ATAAAGTGGTATGGAGTCGA+GGG | 0.602710 | 1.3:+25471533 | MS.gene063573:CDS |
| TGTTGATGTGAAAACTCAAG+AGG | 0.614137 | 1.3:+25470380 | MS.gene063573:CDS |
| AAATTGAAGGTTCCACAAAG+TGG | 0.622358 | 1.3:+25473415 | MS.gene063573:CDS |
| GTAGCGTATATGCACTATCG+TGG | 0.653910 | 1.3:+25471777 | MS.gene063573:CDS |
| CGAGGGTGACTACAATGTGA+TGG | 0.664692 | 1.3:+25471550 | MS.gene063573:CDS |
| ATTGTGATCTTAAAACACAA+AGG | 0.669161 | 1.3:+25472262 | MS.gene063573:CDS |
| TTGTATAGGCTTCTTCAAGG+AGG | 0.676548 | 1.3:+25471286 | MS.gene063573:CDS |
| AGGAAGAAATAATGGCTCTG+GGG | 0.722212 | 1.3:+25473884 | MS.gene063573:intron |
| CATATGAAGAGAGATTAGAA+CGG | 0.732307 | 1.3:+25473577 | MS.gene063573:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTAAACTAAAGATT+TGG | - | chr1.3:25473077-25473096 | None:intergenic | 10.0% |
| !! | GAAAATTAATTTATTACAAA+TGG | + | chr1.3:25473349-25473368 | MS.gene063573:intron | 10.0% |
| !! | TTTAATTAAACTAAAGATTT+GGG | - | chr1.3:25473076-25473095 | None:intergenic | 10.0% |
| !!! | ACATAATATATAATTTTGTT+TGG | + | chr1.3:25472301-25472320 | MS.gene063573:intron | 10.0% |
| !!! | CATAATATATAATTTTGTTT+GGG | + | chr1.3:25472302-25472321 | MS.gene063573:intron | 10.0% |
| !!! | CTAATAAATTTTATTTTAGT+CGG | + | chr1.3:25473809-25473828 | MS.gene063573:intron | 10.0% |
| !!! | TTTTGCATATAATATAATTT+AGG | + | chr1.3:25471883-25471902 | MS.gene063573:intron | 10.0% |
| !! | ATTTATTAAATTATCAGCAT+AGG | - | chr1.3:25473662-25473681 | None:intergenic | 15.0% |
| !! | CGACTAAAATAAAATTTATT+AGG | - | chr1.3:25473811-25473830 | None:intergenic | 15.0% |
| !! | TATGCTGATAATTTAATAAA+TGG | + | chr1.3:25473661-25473680 | MS.gene063573:intron | 15.0% |
| !! | TTAATTAAACTAAAGATTTG+GGG | - | chr1.3:25473075-25473094 | None:intergenic | 15.0% |
| !!! | AAATTTTCAATTTCTTAAAC+AGG | + | chr1.3:25473139-25473158 | MS.gene063573:intron | 15.0% |
| !!! | ATGTTTTCTTTGAATAATTT+GGG | + | chr1.3:25470341-25470360 | MS.gene063573:intron | 15.0% |
| !!! | TATGTTTTCTTTGAATAATT+TGG | + | chr1.3:25470340-25470359 | MS.gene063573:intron | 15.0% |
| !!! | TTAAATGCATTTATTTTTAC+CGG | + | chr1.3:25472057-25472076 | MS.gene063573:intron | 15.0% |
| !! | AAAATCATAAAGTTTGACAT+AGG | - | chr1.3:25472192-25472211 | None:intergenic | 20.0% |
| !! | AAAGATGTTCCTAATATAAT+CGG | - | chr1.3:25471983-25472002 | None:intergenic | 20.0% |
| !! | AATGTGTACGAAAATAATTA+TGG | - | chr1.3:25472493-25472512 | None:intergenic | 20.0% |
| !! | ATGCATATTATTTAAACAAG+TGG | - | chr1.3:25473708-25473727 | None:intergenic | 20.0% |
| !! | CATTAAATACTCAAACTATT+AGG | - | chr1.3:25471480-25471499 | None:intergenic | 20.0% |
| !! | TAAAGGTAGAAAAATACAAA+CGG | + | chr1.3:25472091-25472110 | MS.gene063573:intron | 20.0% |
| !! | TTATATATTATGTACCTGTA+TGG | - | chr1.3:25472294-25472313 | None:intergenic | 20.0% |
| !! | TTCTTAAGATATGAATAATC+AGG | - | chr1.3:25473239-25473258 | None:intergenic | 20.0% |
| !!! | AATTTTCAACAGATGAAATT+TGG | - | chr1.3:25473124-25473143 | None:intergenic | 20.0% |
| !!! | ATATAAATCTTTAGTTTTGC+CGG | + | chr1.3:25472119-25472138 | MS.gene063573:intron | 20.0% |
| !!! | ATCTAAAACATTGGAATTTA+GGG | - | chr1.3:25470669-25470688 | None:intergenic | 20.0% |
| !!! | CATTTTCCAATTAGTATTTA+AGG | + | chr1.3:25470737-25470756 | MS.gene063573:intron | 20.0% |
| !!! | GTTGAGTTATTTTATTGAAA+GGG | - | chr1.3:25470983-25471002 | None:intergenic | 20.0% |
| !!! | TACCTTTATTTTTTGTTTTC+CGG | - | chr1.3:25472079-25472098 | None:intergenic | 20.0% |
| !!! | TATCTAAAACATTGGAATTT+AGG | - | chr1.3:25470670-25470689 | None:intergenic | 20.0% |
| !!! | TCTTTTTTCTACATTTTCAT+TGG | + | chr1.3:25471210-25471229 | MS.gene063573:intron | 20.0% |
| !!! | TGTTATTTTAATTCTAGGAT+AGG | + | chr1.3:25473754-25473773 | MS.gene063573:intron | 20.0% |
| !!! | TGTTGAGTTATTTTATTGAA+AGG | - | chr1.3:25470984-25471003 | None:intergenic | 20.0% |
| !!! | TTTATAACTATCACAAGTTT+TGG | + | chr1.3:25473608-25473627 | MS.gene063573:intron | 20.0% |
| !!! | TTTCACTATATCTAAAACAT+TGG | - | chr1.3:25470678-25470697 | None:intergenic | 20.0% |
| ! | AAACATGATGCAGAAAAATA+AGG | - | chr1.3:25473035-25473054 | None:intergenic | 25.0% |
| ! | AAAGATTGTATTTCACATGA+AGG | - | chr1.3:25471162-25471181 | None:intergenic | 25.0% |
| ! | AACATGATGCAGAAAAATAA+GGG | - | chr1.3:25473034-25473053 | None:intergenic | 25.0% |
| ! | AACTCAACATATTTACTTGT+CGG | + | chr1.3:25470995-25471014 | MS.gene063573:intron | 25.0% |
| ! | AGAAGAAATATGAATGGATA+AGG | + | chr1.3:25472929-25472948 | MS.gene063573:CDS | 25.0% |
| ! | AGCTTCTTGAAACTAAATAT+TGG | - | chr1.3:25472985-25473004 | None:intergenic | 25.0% |
| ! | AGTTGAAACAAAACGTATAA+AGG | - | chr1.3:25472427-25472446 | None:intergenic | 25.0% |
| ! | ATAAAGGGAACAAAATACAA+AGG | - | chr1.3:25472411-25472430 | None:intergenic | 25.0% |
| ! | ATATCTTAAGAAACTCTTTC+GGG | + | chr1.3:25473247-25473266 | MS.gene063573:CDS | 25.0% |
| ! | ATTGTGATCTTAAAACACAA+AGG | + | chr1.3:25472262-25472281 | MS.gene063573:CDS | 25.0% |
| ! | ATTTGATTGGACTAAATTGA+AGG | + | chr1.3:25473402-25473421 | MS.gene063573:CDS | 25.0% |
| ! | CATATCTTAAGAAACTCTTT+CGG | + | chr1.3:25473246-25473265 | MS.gene063573:CDS | 25.0% |
| ! | CTAAAGAGAAGAAATATGAA+TGG | + | chr1.3:25472923-25472942 | MS.gene063573:CDS | 25.0% |
| ! | GAAGAAATATGAATGGATAA+GGG | + | chr1.3:25472930-25472949 | MS.gene063573:CDS | 25.0% |
| ! | GGCAAAACTAAAGATTTATA+TGG | - | chr1.3:25472120-25472139 | None:intergenic | 25.0% |
| ! | GTTGAAACAAAACGTATAAA+GGG | - | chr1.3:25472426-25472445 | None:intergenic | 25.0% |
| ! | TACCGGAAAACAAAAAATAA+AGG | + | chr1.3:25472074-25472093 | MS.gene063573:intron | 25.0% |
| ! | TATAATCCCATCACTAAAAT+AGG | + | chr1.3:25472150-25472169 | MS.gene063573:intron | 25.0% |
| ! | TATGAAAAGAAGAGTAAAAG+AGG | - | chr1.3:25471185-25471204 | None:intergenic | 25.0% |
| ! | TGTATGAGTCTAAATTGTAT+AGG | + | chr1.3:25471272-25471291 | MS.gene063573:CDS | 25.0% |
| ! | TTAAATAAGTCTTCAAGACT+TGG | - | chr1.3:25471593-25471612 | None:intergenic | 25.0% |
| ! | TTTGGTCCTTAAATACTAAT+TGG | - | chr1.3:25470746-25470765 | None:intergenic | 25.0% |
| !! | AGTTTGACTTTGTATTTGAT+TGG | + | chr1.3:25473389-25473408 | MS.gene063573:CDS | 25.0% |
| !! | TGTACCATGATTTTAAATTG+CGG | + | chr1.3:25470555-25470574 | MS.gene063573:intron | 25.0% |
| !! | TTCACTCTTGTATTTGAAAT+AGG | - | chr1.3:25472024-25472043 | None:intergenic | 25.0% |
| !! | TTTGCAAGAATTTTCAAATG+AGG | - | chr1.3:25473325-25473344 | None:intergenic | 25.0% |
| !!! | AAGCATCAATACTGTTTTTA+AGG | - | chr1.3:25471636-25471655 | None:intergenic | 25.0% |
| !!! | AATTTTGTTATAGTCTTCCA+TGG | + | chr1.3:25472875-25472894 | MS.gene063573:intron | 25.0% |
| !!! | GATTTTCTTTTGATTATTGC+AGG | + | chr1.3:25472206-25472225 | MS.gene063573:intron | 25.0% |
| !!! | GTTGGTGTTATTTTAATTCT+AGG | + | chr1.3:25473749-25473768 | MS.gene063573:intron | 25.0% |
| !!! | TGCTAATTTTTATTTGAAGC+CGG | + | chr1.3:25471500-25471519 | MS.gene063573:intron | 25.0% |
| AAATTGTATAGGCTTCTTCA+AGG | + | chr1.3:25471283-25471302 | MS.gene063573:CDS | 30.0% | |
| AATGTATAATGACGAGTACA+AGG | - | chr1.3:25472840-25472859 | None:intergenic | 30.0% | |
| ACTCAACATATTTACTTGTC+GGG | + | chr1.3:25470996-25471015 | MS.gene063573:intron | 30.0% | |
| AGCTATACTTACTAGTTGAT+CGG | - | chr1.3:25471660-25471679 | None:intergenic | 30.0% | |
| ATACCTCATATAAAGTGGTA+TGG | + | chr1.3:25471524-25471543 | MS.gene063573:CDS | 30.0% | |
| CATATGAAGAGAGATTAGAA+CGG | + | chr1.3:25473577-25473596 | MS.gene063573:CDS | 30.0% | |
| CCGCTTATTAACAAAATTGT+CGG | - | chr1.3:25471355-25471374 | None:intergenic | 30.0% | |
| CTAAAGATTTGGGGATTAAA+AGG | - | chr1.3:25473066-25473085 | None:intergenic | 30.0% | |
| CTAAATATTGGTACCTCTAT+TGG | - | chr1.3:25472973-25472992 | None:intergenic | 30.0% | |
| TATATGATACACTGCAAAGT+TGG | + | chr1.3:25473731-25473750 | MS.gene063573:intron | 30.0% | |
| TCTAGTTAAGATAGTACACA+TGG | - | chr1.3:25471749-25471768 | None:intergenic | 30.0% | |
| TGTATAGGTATGATGTGTAT+GGG | - | chr1.3:25470951-25470970 | None:intergenic | 30.0% | |
| TGTGATAGTTATAAACCTGT+AGG | - | chr1.3:25473603-25473622 | None:intergenic | 30.0% | |
| TTTGAAAAGTCGTTGATCAT+AGG | + | chr1.3:25473779-25473798 | MS.gene063573:intron | 30.0% | |
| TTTGCTTCATGCTAGAAATA+TGG | - | chr1.3:25471705-25471724 | None:intergenic | 30.0% | |
| ! | CCGACAATTTTGTTAATAAG+CGG | + | chr1.3:25471352-25471371 | MS.gene063573:intron | 30.0% |
| ! | TAGTTTCAAGAAGCTCTTTT+AGG | + | chr1.3:25472990-25473009 | MS.gene063573:intron | 30.0% |
| !! | AGTTATTTTATTGAAAGGGC+AGG | - | chr1.3:25470979-25470998 | None:intergenic | 30.0% |
| !! | GCATTTTCAGGAAGAAATAA+TGG | + | chr1.3:25473876-25473895 | MS.gene063573:intron | 30.0% |
| !! | GTACTAATGTACTTTTTGAG+AGG | + | chr1.3:25472781-25472800 | MS.gene063573:CDS | 30.0% |
| !! | TAATGTACTTTTTGAGAGGA+AGG | + | chr1.3:25472785-25472804 | MS.gene063573:CDS | 30.0% |
| !! | TTTAAGACTGGTTTCACATT+TGG | - | chr1.3:25473549-25473568 | None:intergenic | 30.0% |
| !!! | AACACAACCTATTTTAGTGA+TGG | - | chr1.3:25472160-25472179 | None:intergenic | 30.0% |
| !!! | ACACAACCTATTTTAGTGAT+GGG | - | chr1.3:25472159-25472178 | None:intergenic | 30.0% |
| !!! | GATCACAATACTTTTTTGCA+AGG | - | chr1.3:25472251-25472270 | None:intergenic | 30.0% |
| AAAGAAGCTAACTCCAATAG+AGG | + | chr1.3:25472957-25472976 | MS.gene063573:CDS | 35.0% | |
| AAATTGAAGGTTCCACAAAG+TGG | + | chr1.3:25473415-25473434 | MS.gene063573:CDS | 35.0% | |
| ACCTGTTGTCCGATTATATT+AGG | + | chr1.3:25471971-25471990 | MS.gene063573:intron | 35.0% | |
| ACTCCATACCACTTTATATG+AGG | - | chr1.3:25471530-25471549 | None:intergenic | 35.0% | |
| AGGGAAAACAAGAATCTCAT+TGG | + | chr1.3:25472558-25472577 | MS.gene063573:intron | 35.0% | |
| AGTACACATGGAAGGTAAAT+CGG | - | chr1.3:25471737-25471756 | None:intergenic | 35.0% | |
| ATAGATTATGAGGTGAGGTT+GGG | + | chr1.3:25473853-25473872 | MS.gene063573:intron | 35.0% | |
| ATTGGTGGAAAATTCAAGCT+TGG | + | chr1.3:25470235-25470254 | MS.gene063573:CDS | 35.0% | |
| CAAAGTCAGACTCTACTATA+GGG | + | chr1.3:25470762-25470781 | MS.gene063573:intron | 35.0% | |
| CAAAGTTCACATCGCAATTA+CGG | - | chr1.3:25470643-25470662 | None:intergenic | 35.0% | |
| CGTTCTAATCTCTCTTCATA+TGG | - | chr1.3:25473579-25473598 | None:intergenic | 35.0% | |
| CTAAAATATTGCTGATGTGG+TGG | + | chr1.3:25470597-25470616 | MS.gene063573:intron | 35.0% | |
| GAGATTCGAGATAGATTATG+AGG | + | chr1.3:25473843-25473862 | MS.gene063573:intron | 35.0% | |
| GTCACTCCAATTTCTATGTA+GGG | + | chr1.3:25470445-25470464 | MS.gene063573:intron | 35.0% | |
| GTGTATAGGTATGATGTGTA+TGG | - | chr1.3:25470952-25470971 | None:intergenic | 35.0% | |
| GTTAAGATAGTACACATGGA+AGG | - | chr1.3:25471745-25471764 | None:intergenic | 35.0% | |
| TCCTAATATAATCGGACAAC+AGG | - | chr1.3:25471975-25471994 | None:intergenic | 35.0% | |
| TGAACCCATTAGAAAGTTCT+CGG | - | chr1.3:25471826-25471845 | None:intergenic | 35.0% | |
| TGCACAAATTACCAATTCCA+AGG | - | chr1.3:25472614-25472633 | None:intergenic | 35.0% | |
| TGTCACTCCAATTTCTATGT+AGG | + | chr1.3:25470444-25470463 | MS.gene063573:intron | 35.0% | |
| TGTTGATGTGAAAACTCAAG+AGG | + | chr1.3:25470380-25470399 | MS.gene063573:CDS | 35.0% | |
| TTAGACTCATACAGAAGTTG+AGG | - | chr1.3:25471265-25471284 | None:intergenic | 35.0% | |
| TTTAACACTCACCTTGGAAT+TGG | + | chr1.3:25472600-25472619 | MS.gene063573:CDS | 35.0% | |
| ! | ATTTGGGACTTGTTTGTTTC+AGG | + | chr1.3:25470357-25470376 | MS.gene063573:intron | 35.0% |
| ! | CAGGTGTACATTATTGACTA+TGG | + | chr1.3:25472225-25472244 | MS.gene063573:intron | 35.0% |
| ! | CCATGATTTTAAATTGCGGT+CGG | + | chr1.3:25470559-25470578 | MS.gene063573:intron | 35.0% |
| ! | CGTCTAAAATATTGCTGATG+TGG | + | chr1.3:25470594-25470613 | MS.gene063573:intron | 35.0% |
| ! | TACATTTTCATTGGCATCTC+AGG | + | chr1.3:25471219-25471238 | MS.gene063573:intron | 35.0% |
| ! | TTAAATTGCGGTTCTAGTCA+CGG | - | chr1.3:25470914-25470933 | None:intergenic | 35.0% |
| !!! | ACTCACACTTGTTTTAGAAC+TGG | - | chr1.3:25473443-25473462 | None:intergenic | 35.0% |
| AAAGCCCGAGAACTTTCTAA+TGG | + | chr1.3:25471818-25471837 | MS.gene063573:CDS | 40.0% | |
| AAATATGACGCGAACTCTGT+TGG | - | chr1.3:25473182-25473201 | None:intergenic | 40.0% | |
| AAGCCCGAGAACTTTCTAAT+GGG | + | chr1.3:25471819-25471838 | MS.gene063573:CDS | 40.0% | |
| ACTGGTGAGTGAAGTTGTTA+TGG | + | chr1.3:25470416-25470435 | MS.gene063573:intron | 40.0% | |
| ATAAAGTGGTATGGAGTCGA+GGG | + | chr1.3:25471533-25471552 | MS.gene063573:CDS | 40.0% | |
| ATATCTGTGCTCTAGCATAG+TGG | + | chr1.3:25471377-25471396 | MS.gene063573:intron | 40.0% | |
| ATGGGATTATACAATGTCGC+CGG | - | chr1.3:25472141-25472160 | None:intergenic | 40.0% | |
| ATTTAGGCACGTATCTGCTA+AGG | + | chr1.3:25471899-25471918 | MS.gene063573:intron | 40.0% | |
| CAGGAAGAAATAATGGCTCT+GGG | + | chr1.3:25473883-25473902 | MS.gene063573:intron | 40.0% | |
| CCAAAGTCAGACTCTACTAT+AGG | + | chr1.3:25470761-25470780 | MS.gene063573:intron | 40.0% | |
| CCACTTTATATGAGGTATGC+CGG | - | chr1.3:25471522-25471541 | None:intergenic | 40.0% | |
| CCTATAGTAGAGTCTGACTT+TGG | - | chr1.3:25470764-25470783 | None:intergenic | 40.0% | |
| CGGGAACTATTCATTAGAGA+AGG | + | chr1.3:25473266-25473285 | MS.gene063573:CDS | 40.0% | |
| CTAGTGACAGATGTAAGTCA+TGG | - | chr1.3:25471932-25471951 | None:intergenic | 40.0% | |
| GAACCCATTAGAAAGTTCTC+GGG | - | chr1.3:25471825-25471844 | None:intergenic | 40.0% | |
| GATAGATTATGAGGTGAGGT+TGG | + | chr1.3:25473852-25473871 | MS.gene063573:intron | 40.0% | |
| GCACGTAGTTGGACAAAATA+TGG | + | chr1.3:25470516-25470535 | MS.gene063573:intron | 40.0% | |
| GTGAAACCAGTCTTAAACAC+AGG | + | chr1.3:25473552-25473571 | MS.gene063573:CDS | 40.0% | |
| GTGACTAGAACCGCAATTTA+AGG | + | chr1.3:25470913-25470932 | MS.gene063573:intron | 40.0% | |
| GTTATAGTCTTCCATGGCAT+GGG | + | chr1.3:25472881-25472900 | MS.gene063573:intron | 40.0% | |
| TAGATTATGAGGTGAGGTTG+GGG | + | chr1.3:25473854-25473873 | MS.gene063573:intron | 40.0% | |
| TATAAAGTGGTATGGAGTCG+AGG | + | chr1.3:25471532-25471551 | MS.gene063573:CDS | 40.0% | |
| TCAGGAAGAAATAATGGCTC+TGG | + | chr1.3:25473882-25473901 | MS.gene063573:intron | 40.0% | |
| TCCACTATTGTCGATCATTG+CGG | + | chr1.3:25473201-25473220 | MS.gene063573:CDS | 40.0% | |
| TCGAGATAGATTATGAGGTG+AGG | + | chr1.3:25473848-25473867 | MS.gene063573:intron | 40.0% | |
| TGTGAAAACTCAAGAGGAAG+TGG | + | chr1.3:25470386-25470405 | MS.gene063573:CDS | 40.0% | |
| TGTTATAGTCTTCCATGGCA+TGG | + | chr1.3:25472880-25472899 | MS.gene063573:intron | 40.0% | |
| TTAGAACTGGAACCACTTTG+TGG | - | chr1.3:25473430-25473449 | None:intergenic | 40.0% | |
| TTCAGGCAGCAAGATAAATC+AGG | + | chr1.3:25471842-25471861 | MS.gene063573:CDS | 40.0% | |
| TTCCACTGATGTTGCATGAA+TGG | + | chr1.3:25472514-25472533 | MS.gene063573:intron | 40.0% | |
| TTGTATAGGCTTCTTCAAGG+AGG | + | chr1.3:25471286-25471305 | MS.gene063573:CDS | 40.0% | |
| ! | AGAGATGATCTAGAATCGCT+TGG | + | chr1.3:25472754-25472773 | MS.gene063573:CDS | 40.0% |
| ! | AGGAAGAAATAATGGCTCTG+GGG | + | chr1.3:25473884-25473903 | MS.gene063573:intron | 40.0% |
| ! | ATTACAAATGGCGCTTTTGC+AGG | + | chr1.3:25473361-25473380 | MS.gene063573:intron | 40.0% |
| ! | ATTTTGTCCAACTACGTGCA+AGG | - | chr1.3:25470515-25470534 | None:intergenic | 40.0% |
| ! | CCGACCGCAATTTAAAATCA+TGG | - | chr1.3:25470562-25470581 | None:intergenic | 40.0% |
| ! | GCACTGTTTTACTCTCAACA+GGG | + | chr1.3:25472539-25472558 | MS.gene063573:intron | 40.0% |
| ! | TACCTGTTCAGCTTCTTTTC+AGG | + | chr1.3:25471326-25471345 | MS.gene063573:intron | 40.0% |
| ! | TATGGTCCTGTGTTTAAGAC+TGG | - | chr1.3:25473561-25473580 | None:intergenic | 40.0% |
| ! | TGCACTGTTTTACTCTCAAC+AGG | + | chr1.3:25472538-25472557 | MS.gene063573:intron | 40.0% |
| ! | TTTTGTCCAACTACGTGCAA+GGG | - | chr1.3:25470514-25470533 | None:intergenic | 40.0% |
| !! | AGCATTTGGGGAGCTTTATT+TGG | + | chr1.3:25470276-25470295 | MS.gene063573:CDS | 40.0% |
| !! | GAGAACTTTCTAATGGGTTC+AGG | + | chr1.3:25471825-25471844 | MS.gene063573:CDS | 40.0% |
| !! | GCAAGTTTTAACACTCACCT+TGG | + | chr1.3:25472594-25472613 | MS.gene063573:CDS | 40.0% |
| !! | GCATTTGGGGAGCTTTATTT+GGG | + | chr1.3:25470277-25470296 | MS.gene063573:CDS | 40.0% |
| !! | GTACTTTTTGAGAGGAAGGT+TGG | + | chr1.3:25472789-25472808 | MS.gene063573:intron | 40.0% |
| !! | TTTTTGAGAGGAAGGTTGGT+TGG | + | chr1.3:25472793-25472812 | MS.gene063573:intron | 40.0% |
| AAAGGGCAGGTGATGTGTAT+AGG | - | chr1.3:25470966-25470985 | None:intergenic | 45.0% | |
| ACCGCAATGATCGACAATAG+TGG | - | chr1.3:25473205-25473224 | None:intergenic | 45.0% | |
| AGAGGAAGTGGCTCTTAAAC+TGG | + | chr1.3:25470398-25470417 | MS.gene063573:CDS | 45.0% | |
| AGCCATTCATGCAACATCAG+TGG | - | chr1.3:25472519-25472538 | None:intergenic | 45.0% | |
| ATGTGTATGGGTACGAGTCA+TGG | - | chr1.3:25470939-25470958 | None:intergenic | 45.0% | |
| CCGGCATACCTCATATAAAG+TGG | + | chr1.3:25471519-25471538 | MS.gene063573:CDS | 45.0% | |
| CGGCATCCCTACATAGAAAT+TGG | - | chr1.3:25470454-25470473 | None:intergenic | 45.0% | |
| GTAGCGTATATGCACTATCG+TGG | + | chr1.3:25471777-25471796 | MS.gene063573:CDS | 45.0% | |
| TCAAGCTTGGCAGCAAACTT+GGG | + | chr1.3:25470248-25470267 | MS.gene063573:CDS | 45.0% | |
| TCTACCAAAACCCTACCCAT+CGG | - | chr1.3:25470474-25470493 | None:intergenic | 45.0% | |
| TGCCTGAAAAGAAGCTGAAC+AGG | - | chr1.3:25471331-25471350 | None:intergenic | 45.0% | |
| TTCAAGCTTGGCAGCAAACT+TGG | + | chr1.3:25470247-25470266 | MS.gene063573:CDS | 45.0% | |
| TTCTATGTAGGGATGCCGAT+GGG | + | chr1.3:25470456-25470475 | MS.gene063573:intron | 45.0% | |
| TTTCTATGTAGGGATGCCGA+TGG | + | chr1.3:25470455-25470474 | MS.gene063573:intron | 45.0% | |
| TTTGTCCAACTACGTGCAAG+GGG | - | chr1.3:25470513-25470532 | None:intergenic | 45.0% | |
| ! | AAACTTGGGAGTGGAGCATT+TGG | + | chr1.3:25470262-25470281 | MS.gene063573:CDS | 45.0% |
| ! | AACTTGGGAGTGGAGCATTT+GGG | + | chr1.3:25470263-25470282 | MS.gene063573:CDS | 45.0% |
| ! | CACAAAGGCACATACCATAC+AGG | + | chr1.3:25472277-25472296 | MS.gene063573:CDS | 45.0% |
| ! | CGAGTCATGGCCTTAAATTG+CGG | - | chr1.3:25470926-25470945 | None:intergenic | 45.0% |
| ! | CTTCAAGACTTGGTCCAAGA+AGG | - | chr1.3:25471583-25471602 | None:intergenic | 45.0% |
| !! | AATTTCATATTTAAATAAAT+TGG | + | chr1.3:25472683-25472702 | MS.gene063573:intron | 5.0% |
| !! | TACAAAATATTATTATATAT+CGG | + | chr1.3:25471440-25471459 | MS.gene063573:intron | 5.0% |
| CACTGATGCGACTCGCATTA+AGG | - | chr1.3:25470864-25470883 | None:intergenic | 50.0% | |
| CAGACTGCAGCATAGGTCTT+TGG | + | chr1.3:25473908-25473927 | MS.gene063573:CDS | 50.0% | |
| CGAGGGTGACTACAATGTGA+TGG | + | chr1.3:25471550-25471569 | MS.gene063573:CDS | 50.0% | |
| GAGAGATTAGAACGGCCTAC+AGG | + | chr1.3:25473585-25473604 | MS.gene063573:CDS | 50.0% | |
| GTGATGGCTGTTGACCTTCT+TGG | + | chr1.3:25471566-25471585 | MS.gene063573:CDS | 50.0% | |
| TCGCAATTACGGTGCCTTTG+CGG | - | chr1.3:25470632-25470651 | None:intergenic | 50.0% | |
| ! | ACTTGGGAGTGGAGCATTTG+GGG | + | chr1.3:25470264-25470283 | MS.gene063573:CDS | 50.0% |
| AGTCTTCCATGGCATGGGCA+CGG | + | chr1.3:25472886-25472905 | MS.gene063573:intron | 55.0% | |
| ATGTAGGGATGCCGATGGGT+AGG | + | chr1.3:25470460-25470479 | MS.gene063573:intron | 55.0% | |
| CTTGGCAGCAAACTTGGGAG+TGG | + | chr1.3:25470253-25470272 | MS.gene063573:CDS | 55.0% | |
| TCTGTCCCCTTGCACGTAGT+TGG | + | chr1.3:25470505-25470524 | MS.gene063573:intron | 55.0% | |
| TGTAGGGATGCCGATGGGTA+GGG | + | chr1.3:25470461-25470480 | MS.gene063573:intron | 55.0% | |
| TTACGGTGCCTTTGCGGTTG+CGG | - | chr1.3:25470626-25470645 | None:intergenic | 55.0% | |
| ! | GATGCCGATGGGTAGGGTTT+TGG | + | chr1.3:25470467-25470486 | MS.gene063573:intron | 55.0% |
| !! | GGTGAGGTTGGGGCATTTTC+AGG | + | chr1.3:25473864-25473883 | MS.gene063573:intron | 55.0% |
| CTACGTGCAAGGGGACAGAC+AGG | - | chr1.3:25470504-25470523 | None:intergenic | 60.0% | |
| CTGGGGACAGACTGCAGCAT+AGG | + | chr1.3:25473901-25473920 | MS.gene063573:CDS | 60.0% | |
| TTCATGCCGTGCCCATGCCA+TGG | - | chr1.3:25472895-25472914 | None:intergenic | 60.0% | |
| CGGTGCCTTTGCGGTTGCGG+TGG | - | chr1.3:25470623-25470642 | None:intergenic | 70.0% | |
| GGTGGCCACCGCAACCGCAA+AGG | + | chr1.3:25470615-25470634 | MS.gene063573:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 25470223 | 25473968 | 25470223 | ID=MS.gene063573 |
| chr1.3 | mRNA | 25470223 | 25473968 | 25470223 | ID=MS.gene063573.t1;Parent=MS.gene063573 |
| chr1.3 | exon | 25470223 | 25470298 | 25470223 | ID=MS.gene063573.t1.exon1;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25470223 | 25470298 | 25470223 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25470379 | 25470419 | 25470379 | ID=MS.gene063573.t1.exon2;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25470379 | 25470419 | 25470379 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25471241 | 25471310 | 25471241 | ID=MS.gene063573.t1.exon3;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25471241 | 25471310 | 25471241 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25471519 | 25471667 | 25471519 | ID=MS.gene063573.t1.exon4;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25471519 | 25471667 | 25471519 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25471768 | 25471863 | 25471768 | ID=MS.gene063573.t1.exon5;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25471768 | 25471863 | 25471768 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25472228 | 25472298 | 25472228 | ID=MS.gene063573.t1.exon6;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25472228 | 25472298 | 25472228 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25472560 | 25472621 | 25472560 | ID=MS.gene063573.t1.exon7;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25472560 | 25472621 | 25472560 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25472743 | 25472806 | 25472743 | ID=MS.gene063573.t1.exon8;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25472743 | 25472806 | 25472743 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25472888 | 25472978 | 25472888 | ID=MS.gene063573.t1.exon9;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25472888 | 25472978 | 25472888 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25473161 | 25473287 | 25473161 | ID=MS.gene063573.t1.exon10;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25473161 | 25473287 | 25473161 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25473383 | 25473456 | 25473383 | ID=MS.gene063573.t1.exon11;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25473383 | 25473456 | 25473383 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25473546 | 25473606 | 25473546 | ID=MS.gene063573.t1.exon12;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25473546 | 25473606 | 25473546 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| chr1.3 | exon | 25473886 | 25473968 | 25473886 | ID=MS.gene063573.t1.exon13;Parent=MS.gene063573.t1 |
| chr1.3 | CDS | 25473886 | 25473968 | 25473886 | ID=cds.MS.gene063573.t1;Parent=MS.gene063573.t1 |
| Gene Sequence |
| Protein sequence |
