Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063823.t1 | GAU18476.1 | 86 | 228 | 27 | 4 | 1 | 227 | 1 | 224 | 1.00E-89 | 339.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063823.t1 | O04479 | 62.9 | 210 | 45 | 5 | 2 | 209 | 4 | 182 | 7.0e-63 | 241.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063823.t1 | A0A2Z6LPR6 | 86.0 | 228 | 27 | 4 | 1 | 227 | 1 | 224 | 7.4e-90 | 339.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene063823.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063823.t1 | MTR_8g040900 | 98.684 | 228 | 2 | 1 | 1 | 227 | 1 | 228 | 2.80e-168 | 462 |
| MS.gene063823.t1 | MTR_4g105170 | 66.929 | 127 | 42 | 0 | 5 | 131 | 9 | 135 | 5.27e-59 | 184 |
| MS.gene063823.t1 | MTR_3g077240 | 75.221 | 113 | 25 | 1 | 1 | 110 | 1 | 113 | 5.39e-58 | 182 |
| MS.gene063823.t1 | MTR_7g033800 | 69.912 | 113 | 34 | 0 | 2 | 114 | 6 | 118 | 4.51e-57 | 179 |
| MS.gene063823.t1 | MTR_5g017950 | 73.394 | 109 | 29 | 0 | 2 | 110 | 3 | 111 | 1.06e-53 | 175 |
| MS.gene063823.t1 | MTR_6g005070 | 69.643 | 112 | 32 | 1 | 1 | 110 | 1 | 112 | 1.42e-53 | 169 |
| MS.gene063823.t1 | MTR_6g005080 | 68.750 | 112 | 33 | 1 | 1 | 110 | 2 | 113 | 9.08e-53 | 167 |
| MS.gene063823.t1 | MTR_3g452660 | 69.091 | 110 | 34 | 0 | 1 | 110 | 1 | 110 | 1.22e-50 | 166 |
| MS.gene063823.t1 | MTR_3g073690 | 67.568 | 111 | 35 | 1 | 1 | 110 | 2 | 112 | 2.11e-48 | 158 |
| MS.gene063823.t1 | MTR_5g083230 | 65.049 | 103 | 36 | 0 | 5 | 107 | 4 | 106 | 1.58e-46 | 152 |
| MS.gene063823.t1 | MTR_3g031660 | 62.617 | 107 | 40 | 0 | 1 | 107 | 1 | 107 | 7.28e-46 | 150 |
| MS.gene063823.t1 | MTR_4g083680 | 65.347 | 101 | 35 | 0 | 6 | 106 | 14 | 114 | 5.94e-45 | 148 |
| MS.gene063823.t1 | MTR_5g083010 | 61.321 | 106 | 41 | 0 | 4 | 109 | 8 | 113 | 4.69e-43 | 143 |
| MS.gene063823.t1 | MTR_2g068760 | 60.784 | 102 | 40 | 0 | 6 | 107 | 12 | 113 | 2.76e-42 | 141 |
| MS.gene063823.t1 | MTR_5g083960 | 43.590 | 156 | 88 | 0 | 4 | 159 | 36 | 191 | 3.80e-42 | 142 |
| MS.gene063823.t1 | MTR_3g071590 | 59.615 | 104 | 42 | 0 | 4 | 107 | 5 | 108 | 9.58e-42 | 139 |
| MS.gene063823.t1 | MTR_3g071420 | 61.386 | 101 | 39 | 0 | 4 | 104 | 11 | 111 | 6.15e-41 | 138 |
| MS.gene063823.t1 | MTR_3g094690 | 56.604 | 106 | 46 | 0 | 6 | 111 | 46 | 151 | 1.32e-40 | 139 |
| MS.gene063823.t1 | MTR_3g094690 | 56.604 | 106 | 45 | 1 | 6 | 111 | 46 | 150 | 1.40e-38 | 134 |
| MS.gene063823.t1 | MTR_2g093310 | 54.717 | 106 | 48 | 0 | 6 | 111 | 32 | 137 | 1.50e-38 | 132 |
| MS.gene063823.t1 | MTR_5g075020 | 58.491 | 106 | 44 | 0 | 6 | 111 | 42 | 147 | 2.04e-37 | 130 |
| MS.gene063823.t1 | MTR_5g075020 | 58.491 | 106 | 44 | 0 | 6 | 111 | 46 | 151 | 4.26e-37 | 130 |
| MS.gene063823.t1 | MTR_7g096530 | 56.897 | 116 | 42 | 2 | 1 | 108 | 1 | 116 | 6.61e-37 | 129 |
| MS.gene063823.t1 | MTR_4g060950 | 55.340 | 103 | 45 | 1 | 6 | 107 | 23 | 125 | 3.66e-36 | 126 |
| MS.gene063823.t1 | MTR_1g095850 | 57.000 | 100 | 43 | 0 | 8 | 107 | 73 | 172 | 3.52e-35 | 125 |
| MS.gene063823.t1 | MTR_8g079660 | 49.091 | 110 | 56 | 0 | 7 | 116 | 8 | 117 | 1.30e-34 | 124 |
| MS.gene063823.t1 | MTR_7g028905 | 50.485 | 103 | 51 | 0 | 6 | 108 | 4 | 106 | 7.08e-34 | 118 |
| MS.gene063823.t1 | MTR_1g070220 | 52.679 | 112 | 52 | 1 | 3 | 113 | 11 | 122 | 3.41e-33 | 119 |
| MS.gene063823.t1 | MTR_8g036085 | 52.830 | 106 | 49 | 1 | 7 | 111 | 23 | 128 | 1.01e-32 | 118 |
| MS.gene063823.t1 | MTR_8g036105 | 53.043 | 115 | 53 | 1 | 7 | 120 | 18 | 132 | 1.11e-32 | 118 |
| MS.gene063823.t1 | MTR_8g079620 | 46.087 | 115 | 62 | 0 | 7 | 121 | 8 | 122 | 1.79e-30 | 113 |
| MS.gene063823.t1 | MTR_4g107450 | 39.103 | 156 | 80 | 3 | 8 | 154 | 11 | 160 | 4.26e-30 | 113 |
| MS.gene063823.t1 | MTR_7g074990 | 57.895 | 95 | 39 | 1 | 7 | 100 | 20 | 114 | 4.60e-30 | 112 |
| MS.gene063823.t1 | MTR_6g027710 | 49.515 | 103 | 51 | 1 | 6 | 107 | 39 | 141 | 1.25e-29 | 110 |
| MS.gene063823.t1 | MTR_5g093010 | 50.538 | 93 | 46 | 0 | 8 | 100 | 6 | 98 | 2.96e-29 | 107 |
| MS.gene063823.t1 | MTR_5g080470 | 49.505 | 101 | 50 | 1 | 1 | 100 | 1 | 101 | 4.20e-29 | 108 |
| MS.gene063823.t1 | MTR_7g096610 | 53.465 | 101 | 46 | 1 | 1 | 100 | 2 | 102 | 4.94e-28 | 106 |
| MS.gene063823.t1 | MTR_6g011250 | 43.860 | 114 | 56 | 2 | 1 | 113 | 3 | 109 | 1.04e-27 | 104 |
| MS.gene063823.t1 | MTR_6g011200 | 40.000 | 130 | 69 | 3 | 1 | 121 | 3 | 132 | 1.35e-27 | 105 |
| MS.gene063823.t1 | MTR_1g070205 | 48.246 | 114 | 56 | 2 | 7 | 119 | 12 | 123 | 3.13e-27 | 104 |
| MS.gene063823.t1 | MTR_6g011230 | 42.574 | 101 | 58 | 0 | 4 | 104 | 8 | 108 | 3.70e-27 | 103 |
| MS.gene063823.t1 | MTR_4g099230 | 36.986 | 146 | 72 | 4 | 8 | 152 | 3 | 129 | 9.03e-27 | 101 |
| MS.gene063823.t1 | MTR_7g075230 | 49.550 | 111 | 53 | 2 | 7 | 114 | 12 | 122 | 4.97e-26 | 100 |
| MS.gene063823.t1 | MTR_8g079580 | 45.455 | 110 | 59 | 1 | 7 | 115 | 8 | 117 | 7.17e-26 | 100 |
| MS.gene063823.t1 | MTR_8g017090 | 40.385 | 104 | 62 | 0 | 8 | 111 | 13 | 116 | 2.72e-25 | 100 |
| MS.gene063823.t1 | MTR_6g027700 | 42.056 | 107 | 61 | 1 | 1 | 106 | 1 | 107 | 1.43e-24 | 97.1 |
| MS.gene063823.t1 | MTR_2g100020 | 34.437 | 151 | 86 | 3 | 8 | 158 | 20 | 157 | 2.36e-24 | 97.8 |
| MS.gene063823.t1 | MTR_5g085390 | 41.228 | 114 | 66 | 1 | 1 | 113 | 3 | 116 | 2.10e-22 | 91.7 |
| MS.gene063823.t1 | MTR_4g088035 | 33.721 | 86 | 57 | 0 | 8 | 93 | 7 | 92 | 1.42e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063823.t1 | AT1G65620 | 61.504 | 226 | 57 | 5 | 2 | 227 | 4 | 199 | 5.40e-78 | 233 |
| MS.gene063823.t1 | AT1G65620 | 61.504 | 226 | 57 | 5 | 2 | 227 | 4 | 199 | 5.40e-78 | 233 |
| MS.gene063823.t1 | AT1G65620 | 61.504 | 226 | 57 | 5 | 2 | 227 | 4 | 199 | 5.40e-78 | 233 |
| MS.gene063823.t1 | AT1G65620 | 61.504 | 226 | 57 | 5 | 2 | 227 | 4 | 199 | 5.40e-78 | 233 |
| MS.gene063823.t1 | AT1G65620 | 61.504 | 226 | 57 | 5 | 2 | 227 | 4 | 199 | 5.40e-78 | 233 |
| MS.gene063823.t1 | AT5G63090 | 69.291 | 127 | 34 | 2 | 1 | 123 | 1 | 126 | 1.06e-56 | 179 |
| MS.gene063823.t1 | AT5G63090 | 69.291 | 127 | 34 | 2 | 1 | 123 | 1 | 126 | 1.06e-56 | 179 |
| MS.gene063823.t1 | AT5G63090 | 69.291 | 127 | 34 | 2 | 1 | 123 | 1 | 126 | 1.06e-56 | 179 |
| MS.gene063823.t1 | AT5G63090 | 69.291 | 127 | 34 | 2 | 1 | 123 | 1 | 126 | 1.06e-56 | 179 |
| MS.gene063823.t1 | AT5G66870 | 75.455 | 110 | 27 | 0 | 1 | 110 | 1 | 110 | 1.19e-55 | 180 |
| MS.gene063823.t1 | AT3G27650 | 63.636 | 121 | 43 | 1 | 4 | 124 | 36 | 155 | 1.15e-53 | 170 |
| MS.gene063823.t1 | AT2G23660 | 70.192 | 104 | 31 | 0 | 4 | 107 | 2 | 105 | 1.72e-50 | 167 |
| MS.gene063823.t1 | AT2G23660 | 70.192 | 104 | 31 | 0 | 4 | 107 | 2 | 105 | 1.72e-50 | 167 |
| MS.gene063823.t1 | AT2G23660 | 70.192 | 104 | 31 | 0 | 4 | 107 | 2 | 105 | 1.72e-50 | 167 |
| MS.gene063823.t1 | AT2G30130 | 65.049 | 103 | 36 | 0 | 5 | 107 | 6 | 108 | 7.07e-46 | 151 |
| MS.gene063823.t1 | AT1G31320 | 69.318 | 88 | 27 | 0 | 6 | 93 | 12 | 99 | 8.69e-42 | 140 |
| MS.gene063823.t1 | AT2G30340 | 57.692 | 104 | 44 | 0 | 6 | 109 | 52 | 155 | 6.33e-41 | 140 |
| MS.gene063823.t1 | AT2G30340 | 57.692 | 104 | 44 | 0 | 6 | 109 | 51 | 154 | 7.56e-41 | 140 |
| MS.gene063823.t1 | AT1G07900 | 57.547 | 106 | 45 | 0 | 6 | 111 | 32 | 137 | 1.56e-39 | 135 |
| MS.gene063823.t1 | AT3G11090 | 56.731 | 104 | 45 | 0 | 4 | 107 | 8 | 111 | 1.48e-38 | 131 |
| MS.gene063823.t1 | AT1G16530 | 57.798 | 109 | 45 | 1 | 6 | 113 | 13 | 121 | 1.88e-38 | 131 |
| MS.gene063823.t1 | AT2G28500 | 56.604 | 106 | 46 | 0 | 6 | 111 | 54 | 159 | 6.27e-38 | 132 |
| MS.gene063823.t1 | AT2G40470 | 57.547 | 106 | 45 | 0 | 6 | 111 | 19 | 124 | 2.26e-37 | 129 |
| MS.gene063823.t1 | AT2G40470 | 51.200 | 125 | 60 | 1 | 6 | 129 | 44 | 168 | 3.47e-37 | 130 |
| MS.gene063823.t1 | AT3G26660 | 52.679 | 112 | 46 | 1 | 8 | 112 | 6 | 117 | 4.21e-37 | 126 |
| MS.gene063823.t1 | AT3G26620 | 53.333 | 105 | 49 | 0 | 8 | 112 | 6 | 110 | 5.83e-37 | 126 |
| MS.gene063823.t1 | AT3G03760 | 55.340 | 103 | 45 | 1 | 6 | 107 | 50 | 152 | 3.51e-33 | 121 |
| MS.gene063823.t1 | AT4G00210 | 54.630 | 108 | 48 | 1 | 7 | 113 | 11 | 118 | 1.00e-32 | 118 |
| MS.gene063823.t1 | AT3G50510 | 48.182 | 110 | 57 | 0 | 1 | 110 | 6 | 115 | 1.19e-32 | 117 |
| MS.gene063823.t1 | AT3G50510 | 48.182 | 110 | 57 | 0 | 1 | 110 | 6 | 115 | 1.19e-32 | 117 |
| MS.gene063823.t1 | AT2G42430 | 50.893 | 112 | 54 | 1 | 2 | 112 | 10 | 121 | 1.83e-32 | 118 |
| MS.gene063823.t1 | AT5G06080 | 50.450 | 111 | 54 | 1 | 1 | 110 | 1 | 111 | 3.94e-30 | 110 |
| MS.gene063823.t1 | AT2G45420 | 51.456 | 103 | 49 | 1 | 10 | 111 | 40 | 142 | 1.66e-29 | 111 |
| MS.gene063823.t1 | AT2G31310 | 49.091 | 110 | 55 | 1 | 1 | 109 | 1 | 110 | 1.67e-29 | 109 |
| MS.gene063823.t1 | AT4G00220 | 52.427 | 103 | 48 | 1 | 10 | 111 | 20 | 122 | 2.05e-29 | 110 |
| MS.gene063823.t1 | AT2G45410 | 52.336 | 107 | 50 | 1 | 10 | 115 | 19 | 125 | 3.85e-29 | 108 |
| MS.gene063823.t1 | AT5G35900 | 48.113 | 106 | 55 | 0 | 8 | 113 | 6 | 111 | 4.26e-29 | 108 |
| MS.gene063823.t1 | AT3G58190 | 49.038 | 104 | 52 | 1 | 7 | 109 | 11 | 114 | 4.69e-28 | 106 |
| MS.gene063823.t1 | AT2G42440 | 47.273 | 110 | 57 | 1 | 1 | 109 | 1 | 110 | 6.51e-28 | 106 |
| MS.gene063823.t1 | AT3G13850 | 40.952 | 105 | 62 | 0 | 8 | 112 | 37 | 141 | 6.18e-27 | 104 |
| MS.gene063823.t1 | AT3G47870 | 40.000 | 105 | 63 | 0 | 8 | 112 | 37 | 141 | 1.62e-25 | 102 |
| MS.gene063823.t1 | AT1G72980 | 37.838 | 111 | 69 | 0 | 4 | 114 | 10 | 120 | 1.15e-20 | 86.7 |
| MS.gene063823.t1 | AT4G22700 | 40.385 | 104 | 60 | 2 | 8 | 110 | 6 | 108 | 1.91e-19 | 83.2 |
| MS.gene063823.t1 | AT1G06280 | 39.080 | 87 | 53 | 0 | 8 | 94 | 25 | 111 | 1.67e-18 | 80.9 |
| MS.gene063823.t1 | AT2G19820 | 32.584 | 89 | 59 | 1 | 6 | 93 | 11 | 99 | 3.00e-14 | 67.4 |
| MS.gene063823.t1 | AT5G15060 | 39.726 | 73 | 42 | 1 | 8 | 78 | 18 | 90 | 8.78e-14 | 66.6 |
| MS.gene063823.t1 | AT3G27940 | 42.424 | 66 | 38 | 0 | 7 | 72 | 5 | 70 | 4.99e-11 | 59.3 |
| MS.gene063823.t1 | AT3G27940 | 42.424 | 66 | 38 | 0 | 7 | 72 | 5 | 70 | 4.99e-11 | 59.3 |
| MS.gene063823.t1 | AT3G27940 | 42.424 | 66 | 38 | 0 | 7 | 72 | 5 | 70 | 4.99e-11 | 59.3 |
Find 45 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTTCGTGATCCTGTTTA+TGG | 0.153983 | 8.1:-63107523 | MS.gene063823:CDS |
| TCAACATCAACAACATAATT+TGG | 0.253618 | 8.1:-63107233 | MS.gene063823:CDS |
| CACATTCTGGTTGGCATTTG+CGG | 0.315598 | 8.1:+63107698 | None:intergenic |
| GTGCTAAATCCGAACTTTCT+CGG | 0.374243 | 8.1:-63107438 | MS.gene063823:CDS |
| TAAGGTGCAAATGCACATTC+TGG | 0.376608 | 8.1:+63107685 | None:intergenic |
| GGCTGATCAGGTGGAAAATA+AGG | 0.377629 | 8.1:+63107667 | None:intergenic |
| ATGAATATTTCTGCTAGCTT+AGG | 0.398380 | 8.1:-63107157 | MS.gene063823:CDS |
| ATCGCAGCAGCGGCTACTGC+CGG | 0.436451 | 8.1:-63107400 | MS.gene063823:CDS |
| GCCGGTCATGGACTCATAAC+CGG | 0.444703 | 8.1:-63107382 | MS.gene063823:CDS |
| CATAGTGCTGCTGGTGGTGG+TGG | 0.453028 | 8.1:-63107112 | MS.gene063823:CDS |
| TGTTGTTGATGTTGATCCCT+TGG | 0.455156 | 8.1:+63107241 | None:intergenic |
| ACACCAACACAACCATAAAC+AGG | 0.455574 | 8.1:+63107511 | None:intergenic |
| GCTGACGAAGCTGGTGTTGA+AGG | 0.471284 | 8.1:+63107479 | None:intergenic |
| CTTCAACATCATAGTGCTGC+TGG | 0.473475 | 8.1:-63107121 | MS.gene063823:CDS |
| CCAGCTTCGTCAGCTTCAAA+TGG | 0.474279 | 8.1:-63107470 | MS.gene063823:CDS |
| GAATCTGTCACGGCCGCTGC+AGG | 0.483621 | 8.1:-63107349 | MS.gene063823:CDS |
| CAACTATGATGCTAGTCTCT+TGG | 0.489577 | 8.1:-63107182 | MS.gene063823:CDS |
| GGACTCATAACCGGCATGAC+AGG | 0.499561 | 8.1:-63107373 | MS.gene063823:CDS |
| CATCATAGTGCTGCTGGTGG+TGG | 0.501541 | 8.1:-63107115 | MS.gene063823:CDS |
| CCATTTGAAGCTGACGAAGC+TGG | 0.508322 | 8.1:+63107470 | None:intergenic |
| GCAGCGGCTACTGCCGGTCA+TGG | 0.512116 | 8.1:-63107394 | MS.gene063823:CDS |
| GCCGGTTATGAGTCCATGAC+CGG | 0.516685 | 8.1:+63107381 | None:intergenic |
| TGCTGCACATGGTGAATTTG+AGG | 0.533620 | 8.1:+63107735 | None:intergenic |
| GACAGATTCACCTGTCATGC+CGG | 0.536335 | 8.1:+63107363 | None:intergenic |
| GATCCTGTTTATGGTTGTGT+TGG | 0.542374 | 8.1:-63107514 | MS.gene063823:CDS |
| CAGCATCTTCACGTTGGTGA+GGG | 0.561735 | 8.1:+63107575 | None:intergenic |
| GCTAGGAGCGGTTAACAGTA+CGG | 0.578504 | 8.1:+63107080 | None:intergenic |
| ACAGCATCTTCACGTTGGTG+AGG | 0.580209 | 8.1:+63107574 | None:intergenic |
| ACGCAGAATACTGCTGTTGG+TGG | 0.584252 | 8.1:-63107313 | MS.gene063823:CDS |
| AAACTTGAGCATCGCAGCAG+CGG | 0.588874 | 8.1:-63107410 | MS.gene063823:CDS |
| GTGCAAATGCACATTCTGGT+TGG | 0.592305 | 8.1:+63107689 | None:intergenic |
| CACACGCAGAATACTGCTGT+TGG | 0.626411 | 8.1:-63107316 | MS.gene063823:CDS |
| CAGCAGTATTCTGCGTGTGG+TGG | 0.626937 | 8.1:+63107320 | None:intergenic |
| GTTGGTGGTAATAACAGTAA+CGG | 0.628758 | 8.1:-63107298 | MS.gene063823:CDS |
| TGGTGAATTTGAGGATGCCA+TGG | 0.633685 | 8.1:+63107744 | None:intergenic |
| AGAAACTTGCATGCTGCACA+TGG | 0.636607 | 8.1:+63107724 | None:intergenic |
| CAACAGCAGTATTCTGCGTG+TGG | 0.645847 | 8.1:+63107317 | None:intergenic |
| CATGACAGGTGAATCTGTCA+CGG | 0.646689 | 8.1:-63107359 | MS.gene063823:CDS |
| AATTAACAGCATCTTCACGT+TGG | 0.680722 | 8.1:+63107569 | None:intergenic |
| GTGGTGGTAATTACCTGCAG+CGG | 0.695355 | 8.1:+63107336 | None:intergenic |
| TTAGAAACCCTAGCTAGGAG+CGG | 0.696119 | 8.1:+63107068 | None:intergenic |
| GATGTTGATAACGATGGTCA+CGG | 0.703058 | 8.1:+63107275 | None:intergenic |
| ACTGATGATGTTGATAACGA+TGG | 0.704667 | 8.1:+63107269 | None:intergenic |
| CAACATCATAGTGCTGCTGG+TGG | 0.709794 | 8.1:-63107118 | MS.gene063823:CDS |
| AGGAGCGGTTAACAGTACGG+CGG | 0.830864 | 8.1:+63107083 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTGGTAAGAAATTTTGA+TGG | - | chr8.1:63107606-63107625 | MS.gene063823:CDS | 20.0% |
| ! | TCAACATCAACAACATAATT+TGG | - | chr8.1:63107590-63107609 | MS.gene063823:CDS | 25.0% |
| !! | GCAAATGTTCATAGAATTTT+TGG | - | chr8.1:63107189-63107208 | MS.gene063823:CDS | 25.0% |
| !! | TGAACATTTGCAAATTTTTG+TGG | + | chr8.1:63107180-63107199 | None:intergenic | 25.0% |
| ! | ATGAATATTTCTGCTAGCTT+AGG | - | chr8.1:63107666-63107685 | MS.gene063823:CDS | 30.0% |
| !! | TTGGTAAGAAATTTTGATGG+TGG | - | chr8.1:63107609-63107628 | MS.gene063823:CDS | 30.0% |
| !!! | AACATCATCAGTTTTTTCCA+AGG | - | chr8.1:63107565-63107584 | MS.gene063823:CDS | 30.0% |
| !!! | ACATCATCAGTTTTTTCCAA+GGG | - | chr8.1:63107566-63107585 | MS.gene063823:CDS | 30.0% |
| !!! | AGAAATTTTGATGGTGGAAT+TGG | - | chr8.1:63107615-63107634 | MS.gene063823:CDS | 30.0% |
| !!! | GAAATTTTGATGGTGGAATT+GGG | - | chr8.1:63107616-63107635 | MS.gene063823:CDS | 30.0% |
| AATTAACAGCATCTTCACGT+TGG | + | chr8.1:63107257-63107276 | None:intergenic | 35.0% | |
| !! | ACTGATGATGTTGATAACGA+TGG | + | chr8.1:63107557-63107576 | None:intergenic | 35.0% |
| !! | GTTGGTGGTAATAACAGTAA+CGG | - | chr8.1:63107525-63107544 | MS.gene063823:CDS | 35.0% |
| !!! | GTTTTGAAACCGAGAAAGTT+CGG | + | chr8.1:63107397-63107416 | None:intergenic | 35.0% |
| ACACCAACACAACCATAAAC+AGG | + | chr8.1:63107315-63107334 | None:intergenic | 40.0% | |
| GATCCTGTTTATGGTTGTGT+TGG | - | chr8.1:63107309-63107328 | MS.gene063823:CDS | 40.0% | |
| GTGCTAAATCCGAACTTTCT+CGG | - | chr8.1:63107385-63107404 | MS.gene063823:CDS | 40.0% | |
| TAAGGTGCAAATGCACATTC+TGG | + | chr8.1:63107141-63107160 | None:intergenic | 40.0% | |
| TGTTGTTGATGTTGATCCCT+TGG | + | chr8.1:63107585-63107604 | None:intergenic | 40.0% | |
| ! | AATTTTTGTGGCTGATCAGG+TGG | + | chr8.1:63107168-63107187 | None:intergenic | 40.0% |
| ! | CAACTATGATGCTAGTCTCT+TGG | - | chr8.1:63107641-63107660 | MS.gene063823:CDS | 40.0% |
| ! | GCAAATTTTTGTGGCTGATC+AGG | + | chr8.1:63107171-63107190 | None:intergenic | 40.0% |
| !! | GATGTTGATAACGATGGTCA+CGG | + | chr8.1:63107551-63107570 | None:intergenic | 40.0% |
| AGAAACTTGCATGCTGCACA+TGG | + | chr8.1:63107102-63107121 | None:intergenic | 45.0% | |
| CATGACAGGTGAATCTGTCA+CGG | - | chr8.1:63107464-63107483 | MS.gene063823:CDS | 45.0% | |
| CGACTTCGTGATCCTGTTTA+TGG | - | chr8.1:63107300-63107319 | MS.gene063823:CDS | 45.0% | |
| CTTCAACATCATAGTGCTGC+TGG | - | chr8.1:63107702-63107721 | MS.gene063823:CDS | 45.0% | |
| GGCTGATCAGGTGGAAAATA+AGG | + | chr8.1:63107159-63107178 | None:intergenic | 45.0% | |
| GTGCAAATGCACATTCTGGT+TGG | + | chr8.1:63107137-63107156 | None:intergenic | 45.0% | |
| TGCTGCACATGGTGAATTTG+AGG | + | chr8.1:63107091-63107110 | None:intergenic | 45.0% | |
| ! | CACATTCTGGTTGGCATTTG+CGG | + | chr8.1:63107128-63107147 | None:intergenic | 45.0% |
| ACAGCATCTTCACGTTGGTG+AGG | + | chr8.1:63107252-63107271 | None:intergenic | 50.0% | |
| ACGCAGAATACTGCTGTTGG+TGG | - | chr8.1:63107510-63107529 | MS.gene063823:CDS | 50.0% | |
| CAACAGCAGTATTCTGCGTG+TGG | + | chr8.1:63107509-63107528 | None:intergenic | 50.0% | |
| CACACGCAGAATACTGCTGT+TGG | - | chr8.1:63107507-63107526 | MS.gene063823:CDS | 50.0% | |
| CCAGCTTCGTCAGCTTCAAA+TGG | - | chr8.1:63107353-63107372 | MS.gene063823:CDS | 50.0% | |
| GACAGATTCACCTGTCATGC+CGG | + | chr8.1:63107463-63107482 | None:intergenic | 50.0% | |
| GTGGTGGTAATTACCTGCAG+CGG | + | chr8.1:63107490-63107509 | None:intergenic | 50.0% | |
| ! | AAACTTGAGCATCGCAGCAG+CGG | - | chr8.1:63107413-63107432 | MS.gene063823:CDS | 50.0% |
| ! | CAACATCATAGTGCTGCTGG+TGG | - | chr8.1:63107705-63107724 | MS.gene063823:CDS | 50.0% |
| ! | CAGCATCTTCACGTTGGTGA+GGG | + | chr8.1:63107251-63107270 | None:intergenic | 50.0% |
| ! | CCATTTGAAGCTGACGAAGC+TGG | + | chr8.1:63107356-63107375 | None:intergenic | 50.0% |
| AGGAGCGGTTAACAGTACGG+CGG | + | chr8.1:63107743-63107762 | None:intergenic | 55.0% | |
| CAGCAGTATTCTGCGTGTGG+TGG | + | chr8.1:63107506-63107525 | None:intergenic | 55.0% | |
| GCCGGTCATGGACTCATAAC+CGG | - | chr8.1:63107441-63107460 | MS.gene063823:CDS | 55.0% | |
| GCCGGTTATGAGTCCATGAC+CGG | + | chr8.1:63107445-63107464 | None:intergenic | 55.0% | |
| GGACTCATAACCGGCATGAC+AGG | - | chr8.1:63107450-63107469 | MS.gene063823:CDS | 55.0% | |
| ! | CATCATAGTGCTGCTGGTGG+TGG | - | chr8.1:63107708-63107727 | MS.gene063823:CDS | 55.0% |
| ! | GCTGACGAAGCTGGTGTTGA+AGG | + | chr8.1:63107347-63107366 | None:intergenic | 55.0% |
| !! | CATAGTGCTGCTGGTGGTGG+TGG | - | chr8.1:63107711-63107730 | MS.gene063823:CDS | 60.0% |
| ATCGCAGCAGCGGCTACTGC+CGG | - | chr8.1:63107423-63107442 | MS.gene063823:CDS | 65.0% | |
| GAATCTGTCACGGCCGCTGC+AGG | - | chr8.1:63107474-63107493 | MS.gene063823:CDS | 65.0% | |
| GCAGCGGCTACTGCCGGTCA+TGG | - | chr8.1:63107429-63107448 | MS.gene063823:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 63107081 | 63107764 | 63107081 | ID=MS.gene063823 |
| chr8.1 | mRNA | 63107081 | 63107764 | 63107081 | ID=MS.gene063823.t1;Parent=MS.gene063823 |
| chr8.1 | exon | 63107081 | 63107764 | 63107081 | ID=MS.gene063823.t1.exon1;Parent=MS.gene063823.t1 |
| chr8.1 | CDS | 63107081 | 63107764 | 63107081 | ID=cds.MS.gene063823.t1;Parent=MS.gene063823.t1 |
| Gene Sequence |
| Protein sequence |
