Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06402.t1 | XP_024630170.1 | 86 | 750 | 103 | 2 | 1 | 749 | 1 | 749 | 0.00E+00 | 1310 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06402.t1 | Q9SZL8 | 33.2 | 575 | 375 | 7 | 6 | 574 | 69 | 640 | 1.7e-97 | 358.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06402.t1 | A0A396JHA3 | 79.1 | 593 | 124 | 0 | 1 | 593 | 1 | 593 | 5.1e-289 | 1003.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene06402.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06402.t1 | MTR_7g074790 | 72.472 | 178 | 31 | 1 | 1 | 178 | 1 | 160 | 5.66e-82 | 261 |
MS.gene06402.t1 | MTR_7g074790 | 81.081 | 74 | 13 | 1 | 676 | 749 | 157 | 229 | 1.17e-33 | 129 |
MS.gene06402.t1 | MTR_5g039760 | 61.165 | 206 | 55 | 2 | 1 | 205 | 1 | 182 | 2.89e-79 | 252 |
MS.gene06402.t1 | MTR_7g061980 | 66.387 | 119 | 40 | 0 | 1 | 119 | 1 | 119 | 1.35e-50 | 172 |
MS.gene06402.t1 | MTR_0558s0020 | 33.582 | 268 | 155 | 6 | 3 | 250 | 32 | 296 | 6.93e-39 | 146 |
MS.gene06402.t1 | MTR_6g051425 | 31.900 | 279 | 178 | 5 | 9 | 277 | 13 | 289 | 1.42e-37 | 144 |
MS.gene06402.t1 | MTR_3g058090 | 52.846 | 123 | 37 | 1 | 543 | 665 | 5 | 106 | 3.29e-31 | 118 |
MS.gene06402.t1 | MTR_8g446020 | 31.600 | 250 | 145 | 6 | 3 | 250 | 31 | 256 | 9.41e-31 | 122 |
MS.gene06402.t1 | MTR_0402s0040 | 41.989 | 181 | 100 | 4 | 10 | 187 | 26 | 204 | 1.75e-30 | 126 |
MS.gene06402.t1 | MTR_6g090505 | 33.624 | 229 | 136 | 5 | 45 | 257 | 10 | 238 | 4.58e-28 | 117 |
MS.gene06402.t1 | MTR_4g102720 | 34.911 | 169 | 76 | 2 | 7 | 175 | 4 | 138 | 1.24e-26 | 108 |
MS.gene06402.t1 | MTR_1g083640 | 27.984 | 243 | 152 | 6 | 3 | 225 | 47 | 286 | 1.22e-24 | 105 |
MS.gene06402.t1 | MTR_1g070355 | 27.039 | 233 | 163 | 3 | 15 | 243 | 79 | 308 | 5.85e-23 | 104 |
MS.gene06402.t1 | MTR_4g069880 | 58.824 | 68 | 28 | 0 | 1 | 68 | 1 | 68 | 7.30e-21 | 87.4 |
MS.gene06402.t1 | MTR_1g019850 | 33.566 | 143 | 82 | 4 | 3 | 141 | 63 | 196 | 1.95e-17 | 82.8 |
MS.gene06402.t1 | MTR_4g035820 | 23.988 | 321 | 223 | 8 | 10 | 319 | 75 | 385 | 5.66e-17 | 85.9 |
MS.gene06402.t1 | MTR_5g015480 | 37.179 | 156 | 84 | 5 | 4 | 156 | 53 | 197 | 8.17e-17 | 81.6 |
MS.gene06402.t1 | MTR_5g076070 | 25.328 | 229 | 166 | 3 | 13 | 238 | 56 | 282 | 1.38e-16 | 81.3 |
MS.gene06402.t1 | MTR_0337s0040 | 27.751 | 209 | 128 | 4 | 11 | 217 | 37 | 224 | 2.11e-16 | 79.7 |
MS.gene06402.t1 | MTR_2g099430 | 48.276 | 87 | 43 | 2 | 34 | 119 | 27 | 112 | 6.46e-16 | 74.7 |
MS.gene06402.t1 | MTR_6g022070 | 28.571 | 175 | 118 | 3 | 304 | 477 | 1 | 169 | 8.61e-16 | 79.7 |
MS.gene06402.t1 | MTR_4g117620 | 72.000 | 50 | 12 | 2 | 699 | 748 | 30 | 77 | 2.56e-15 | 72.0 |
MS.gene06402.t1 | MTR_7g113010 | 41.732 | 127 | 58 | 5 | 10 | 134 | 457 | 569 | 2.61e-15 | 80.1 |
MS.gene06402.t1 | MTR_7g446510 | 29.651 | 172 | 121 | 0 | 87 | 258 | 158 | 329 | 3.32e-15 | 78.2 |
MS.gene06402.t1 | MTR_1g013060 | 26.923 | 208 | 145 | 3 | 7 | 208 | 21 | 227 | 3.92e-14 | 72.8 |
MS.gene06402.t1 | MTR_2g014100 | 25.837 | 209 | 132 | 6 | 3 | 191 | 40 | 245 | 4.20e-14 | 73.2 |
MS.gene06402.t1 | MTR_7g446520 | 26.872 | 227 | 151 | 3 | 14 | 240 | 92 | 303 | 4.30e-14 | 74.7 |
MS.gene06402.t1 | MTR_7g446480 | 29.651 | 172 | 121 | 0 | 87 | 258 | 143 | 314 | 1.43e-13 | 72.8 |
MS.gene06402.t1 | MTR_5g045210 | 31.000 | 100 | 67 | 1 | 545 | 642 | 20 | 119 | 5.92e-13 | 68.9 |
MS.gene06402.t1 | MTR_6g017200 | 45.783 | 83 | 43 | 2 | 10 | 91 | 58 | 139 | 6.26e-13 | 67.4 |
MS.gene06402.t1 | MTR_1g086270 | 31.707 | 82 | 56 | 0 | 304 | 385 | 1 | 82 | 7.45e-13 | 65.9 |
MS.gene06402.t1 | MTR_2g070590 | 41.346 | 104 | 57 | 3 | 10 | 110 | 17 | 119 | 7.84e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06402.t1 | AT4G38180 | 31.987 | 619 | 409 | 8 | 6 | 615 | 69 | 684 | 7.90e-110 | 352 |
MS.gene06402.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 3.04e-101 | 330 |
MS.gene06402.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 3.04e-101 | 330 |
MS.gene06402.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 3.04e-101 | 330 |
MS.gene06402.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 3.04e-101 | 330 |
MS.gene06402.t1 | AT4G15090 | 30.890 | 573 | 390 | 6 | 3 | 572 | 44 | 613 | 3.04e-101 | 330 |
MS.gene06402.t1 | AT1G76320 | 29.797 | 641 | 423 | 12 | 14 | 651 | 1 | 617 | 8.79e-84 | 280 |
MS.gene06402.t1 | AT1G76320 | 29.797 | 641 | 423 | 12 | 14 | 651 | 1 | 617 | 2.27e-83 | 280 |
MS.gene06402.t1 | AT1G76320 | 29.797 | 641 | 423 | 12 | 14 | 651 | 1 | 617 | 2.27e-83 | 280 |
MS.gene06402.t1 | AT1G76320 | 29.797 | 641 | 423 | 12 | 14 | 651 | 1 | 617 | 2.44e-83 | 280 |
MS.gene06402.t1 | AT3G06250 | 29.353 | 603 | 368 | 12 | 9 | 604 | 189 | 740 | 2.95e-83 | 281 |
MS.gene06402.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.44e-11 | 65.9 |
MS.gene06402.t1 | AT3G06250 | 29.353 | 603 | 368 | 12 | 9 | 604 | 189 | 740 | 2.95e-83 | 281 |
MS.gene06402.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.44e-11 | 65.9 |
MS.gene06402.t1 | AT3G06250 | 29.353 | 603 | 368 | 12 | 9 | 604 | 189 | 740 | 2.95e-83 | 281 |
MS.gene06402.t1 | AT3G06250 | 38.462 | 104 | 48 | 3 | 9 | 110 | 27 | 116 | 9.44e-11 | 65.9 |
MS.gene06402.t1 | AT3G22170 | 28.916 | 581 | 373 | 8 | 3 | 568 | 63 | 618 | 5.17e-83 | 281 |
MS.gene06402.t1 | AT3G22170 | 28.916 | 581 | 373 | 8 | 3 | 568 | 63 | 618 | 5.17e-83 | 281 |
MS.gene06402.t1 | AT5G18960 | 28.192 | 603 | 378 | 13 | 9 | 604 | 210 | 764 | 1.47e-74 | 258 |
MS.gene06402.t1 | AT5G18960 | 39.423 | 104 | 47 | 3 | 9 | 110 | 42 | 131 | 2.63e-11 | 67.8 |
MS.gene06402.t1 | AT5G18960 | 28.192 | 603 | 378 | 13 | 9 | 604 | 210 | 764 | 1.47e-74 | 258 |
MS.gene06402.t1 | AT5G18960 | 39.423 | 104 | 47 | 3 | 9 | 110 | 42 | 131 | 2.63e-11 | 67.8 |
MS.gene06402.t1 | AT2G27110 | 29.223 | 592 | 384 | 11 | 9 | 596 | 48 | 608 | 4.91e-73 | 254 |
MS.gene06402.t1 | AT2G27110 | 29.223 | 592 | 384 | 11 | 9 | 596 | 48 | 608 | 4.91e-73 | 254 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 4.43e-67 | 236 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 4.78e-67 | 236 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 4.78e-67 | 236 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 38 | 586 | 7.17e-67 | 236 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 7.86e-67 | 236 |
MS.gene06402.t1 | AT4G19990 | 26.531 | 588 | 374 | 8 | 13 | 581 | 24 | 572 | 7.86e-67 | 236 |
MS.gene06402.t1 | AT2G27110 | 31.106 | 434 | 290 | 6 | 167 | 596 | 35 | 463 | 1.28e-65 | 231 |
MS.gene06402.t1 | AT4G38170 | 32.010 | 403 | 253 | 9 | 190 | 587 | 24 | 410 | 2.40e-65 | 227 |
MS.gene06402.t1 | AT4G19990 | 26.449 | 552 | 349 | 7 | 48 | 581 | 3 | 515 | 5.37e-63 | 224 |
MS.gene06402.t1 | AT1G52520 | 26.049 | 572 | 388 | 11 | 10 | 566 | 85 | 636 | 3.32e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 4.86e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 8.38e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 8.38e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 9.20e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 9.20e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.325 | 616 | 404 | 10 | 11 | 620 | 39 | 604 | 9.20e-62 | 222 |
MS.gene06402.t1 | AT2G32250 | 25.122 | 613 | 403 | 10 | 14 | 620 | 1 | 563 | 5.72e-61 | 219 |
MS.gene06402.t1 | AT2G32250 | 25.122 | 613 | 403 | 10 | 14 | 620 | 1 | 563 | 6.03e-61 | 219 |
MS.gene06402.t1 | AT1G10240 | 26.011 | 569 | 396 | 11 | 10 | 565 | 48 | 604 | 3.82e-55 | 201 |
MS.gene06402.t1 | AT1G10240 | 26.011 | 569 | 396 | 11 | 10 | 565 | 48 | 604 | 3.82e-55 | 201 |
MS.gene06402.t1 | AT1G80010 | 25.254 | 590 | 413 | 12 | 10 | 581 | 95 | 674 | 1.39e-54 | 201 |
MS.gene06402.t1 | AT5G28530 | 22.777 | 641 | 447 | 11 | 8 | 620 | 53 | 673 | 9.65e-48 | 180 |
MS.gene06402.t1 | AT5G28530 | 23.125 | 640 | 442 | 12 | 8 | 620 | 53 | 669 | 1.22e-47 | 180 |
MS.gene06402.t1 | AT5G28530 | 23.125 | 640 | 442 | 12 | 8 | 620 | 53 | 669 | 1.22e-47 | 180 |
MS.gene06402.t1 | AT5G28530 | 21.270 | 630 | 407 | 12 | 8 | 620 | 53 | 610 | 2.14e-34 | 140 |
MS.gene06402.t1 | AT5G28530 | 21.622 | 629 | 402 | 13 | 8 | 620 | 53 | 606 | 3.92e-34 | 139 |
Find 112 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTTGTCTGAAACCGAATT+TGG | 0.185399 | 3.2:+80422910 | MS.gene06402:CDS |
AGACAATTCCATCATTTAAA+TGG | 0.223041 | 3.2:+80422480 | MS.gene06402:CDS |
TGGAAGAGGCTGAACAATTT+TGG | 0.228865 | 3.2:+80421721 | MS.gene06402:CDS |
ATAATCTTCACAATAATAAT+TGG | 0.259572 | 3.2:+80422774 | MS.gene06402:CDS |
CAAAATGTTTGAAGAATTGT+AGG | 0.276339 | 3.2:-80422937 | None:intergenic |
ATTACACTTTCACGTCAAAA+TGG | 0.279218 | 3.2:+80421927 | MS.gene06402:CDS |
TGGAATGAAATTTGATACTA+TGG | 0.288067 | 3.2:+80421701 | MS.gene06402:CDS |
TGATGATGTTACAAATATTC+AGG | 0.293363 | 3.2:+80424059 | MS.gene06402:CDS |
AACAAATTACAAACGTGTTC+TGG | 0.334571 | 3.2:+80422297 | MS.gene06402:CDS |
ATGGCTGATGACTCTGGATT+AGG | 0.348989 | 3.2:+80422068 | MS.gene06402:CDS |
AAATGATCGTACCTCTATAA+TGG | 0.360454 | 3.2:-80422433 | None:intergenic |
GCATGTTTCTTGAATCCCTT+TGG | 0.367868 | 3.2:-80423619 | None:intergenic |
GGAATTAAACATCTTGGAAA+TGG | 0.370237 | 3.2:+80422647 | MS.gene06402:CDS |
TGACATCTTCAAATGTTGAT+TGG | 0.374678 | 3.2:+80421667 | MS.gene06402:CDS |
CAGAATGGAATTAAACATCT+TGG | 0.376869 | 3.2:+80422641 | MS.gene06402:CDS |
CTAGTTTGAGCATGTTTACT+TGG | 0.384506 | 3.2:-80423709 | None:intergenic |
TGGCTGATGACTCTGGATTA+GGG | 0.390441 | 3.2:+80422069 | MS.gene06402:CDS |
AGGAAAATCATGAAGGATCT+TGG | 0.394084 | 3.2:+80423185 | MS.gene06402:CDS |
TCAAATTTCATTCCAAGTCT+TGG | 0.395389 | 3.2:-80421693 | None:intergenic |
GTGTGTATACCTTTCCCATT+TGG | 0.396083 | 3.2:-80423060 | None:intergenic |
TTCACCAATACTAATCCAAA+TGG | 0.397247 | 3.2:+80423045 | MS.gene06402:CDS |
GTTTGTCTGAAACCGAATTT+GGG | 0.397918 | 3.2:+80422911 | MS.gene06402:CDS |
TGTAAGATGTATGATACATT+TGG | 0.401457 | 3.2:+80423250 | MS.gene06402:CDS |
TTATGTCGCTTAGTTCCCTT+TGG | 0.401911 | 3.2:-80423646 | None:intergenic |
CCCTAGACATTGCTTGACTT+TGG | 0.402723 | 3.2:-80422562 | None:intergenic |
TCAAACAACCATTTAAATGA+TGG | 0.407895 | 3.2:-80422488 | None:intergenic |
TGGTCAGTGAAGATCGTCTT+TGG | 0.409022 | 3.2:-80422542 | None:intergenic |
TATACCTGTGAATTTCTTTG+AGG | 0.409803 | 3.2:-80423742 | None:intergenic |
TATAAAATTAACAACTCAAA+TGG | 0.424095 | 3.2:+80423842 | MS.gene06402:CDS |
TTTCCCATTTGGATTAGTAT+TGG | 0.428381 | 3.2:-80423049 | None:intergenic |
CTTCTTAAAATATACTTCTC+AGG | 0.433030 | 3.2:-80423328 | None:intergenic |
GTATTTCCAACAGCAATTGT+TGG | 0.433256 | 3.2:+80422232 | MS.gene06402:CDS |
AATTGTAGGATACCCAAATT+CGG | 0.433675 | 3.2:-80422923 | None:intergenic |
TGTCTAGAAATCGAATGTTC+AGG | 0.434178 | 3.2:+80423422 | MS.gene06402:CDS |
ATCTTGCACAATGCCATAAC+GGG | 0.434412 | 3.2:-80423365 | None:intergenic |
ATGTAGGTTTGTTTGTTGTA+AGG | 0.436082 | 3.2:+80421821 | MS.gene06402:CDS |
ACAAGCAAATGAGATTGATA+TGG | 0.437582 | 3.2:+80422049 | MS.gene06402:CDS |
TTAACAACTCAAATGGTTGA+TGG | 0.439086 | 3.2:+80423849 | MS.gene06402:CDS |
CCGTTCTAGACTCGGCTCTC+CGG | 0.443682 | 3.2:-80421890 | None:intergenic |
TCTGGTTTCAACCATTATAG+AGG | 0.443875 | 3.2:+80422422 | MS.gene06402:CDS |
ATTGATATGGCTGATGACTC+TGG | 0.443968 | 3.2:+80422062 | MS.gene06402:CDS |
ACCTGTGAATTTCTTTGAGG+TGG | 0.445591 | 3.2:-80423739 | None:intergenic |
GTTTGAATTGAATGATGTTA+AGG | 0.447594 | 3.2:+80423300 | MS.gene06402:CDS |
AAAGGAGGTTCTTTGCTAAG+AGG | 0.453456 | 3.2:+80422677 | MS.gene06402:CDS |
CATAAACCATGGTGAGTCTC+AGG | 0.455966 | 3.2:-80422602 | None:intergenic |
ATTCGATTTCTAGACAACTT+AGG | 0.457251 | 3.2:-80423415 | None:intergenic |
ACATGTCCTCACGTGCTAGC+GGG | 0.469336 | 3.2:-80423905 | None:intergenic |
CCTGTGAATTTCTTTGAGGT+GGG | 0.471695 | 3.2:-80423738 | None:intergenic |
AATCTTGCACAATGCCATAA+CGG | 0.484556 | 3.2:-80423366 | None:intergenic |
GTTTGAGCATGTTTACTTGG+AGG | 0.485005 | 3.2:-80423706 | None:intergenic |
AGGTTTGTTTGTTGTAAGGA+AGG | 0.486878 | 3.2:+80421825 | MS.gene06402:CDS |
CATCTTACAACTACAAGTAA+TGG | 0.489617 | 3.2:-80423236 | None:intergenic |
TGTCGCTTAGTTCCCTTTGG+AGG | 0.489630 | 3.2:-80423643 | None:intergenic |
TGAGAAAGCTTGGGTTGACT+TGG | 0.491006 | 3.2:+80422742 | MS.gene06402:CDS |
TGGACAAGAGAAGCCCGTTA+TGG | 0.496786 | 3.2:+80423352 | MS.gene06402:CDS |
GTTGATTGGAAGCCAAGACT+TGG | 0.497681 | 3.2:+80421681 | MS.gene06402:CDS |
CTTGGAAATGGAATGAAGAA+AGG | 0.500755 | 3.2:+80422659 | MS.gene06402:CDS |
CATGTCCTCACGTGCTAGCG+GGG | 0.504056 | 3.2:-80423904 | None:intergenic |
CTGGTCATCCATGAGTTTGA+AGG | 0.505313 | 3.2:+80421954 | MS.gene06402:CDS |
CTTCTTTCATGCATATCAGA+TGG | 0.507819 | 3.2:+80422265 | MS.gene06402:CDS |
TAGTTACACAACTATGATGA+TGG | 0.512138 | 3.2:+80423932 | MS.gene06402:CDS |
ACCAAAGTCAAGCAATGTCT+AGG | 0.513361 | 3.2:+80422561 | MS.gene06402:CDS |
GATTCTCCAACAATTGCTGT+TGG | 0.523496 | 3.2:-80422238 | None:intergenic |
GAAATTTGATACTATGGAAG+AGG | 0.525500 | 3.2:+80421707 | MS.gene06402:CDS |
TTCACGTCAAAATGGAAAGC+TGG | 0.527122 | 3.2:+80421935 | MS.gene06402:CDS |
TTCTGATGCTATACAACCAA+AGG | 0.531212 | 3.2:+80423603 | MS.gene06402:CDS |
AGCATGGTGTATGGCGACGC+TGG | 0.534307 | 3.2:+80422197 | MS.gene06402:CDS |
CAACTTATGAGCACACATGC+AGG | 0.537532 | 3.2:+80422107 | MS.gene06402:CDS |
AAGAAACATGCTCCTCCAAA+GGG | 0.539093 | 3.2:+80423631 | MS.gene06402:CDS |
TCACCAATACTAATCCAAAT+GGG | 0.541805 | 3.2:+80423046 | MS.gene06402:CDS |
TAAGCAATCCGTTCTAGACT+CGG | 0.542410 | 3.2:-80421898 | None:intergenic |
CAAGAAACATGCTCCTCCAA+AGG | 0.544628 | 3.2:+80423630 | MS.gene06402:CDS |
ATGGGCTGCATGTTATATGA+AGG | 0.546460 | 3.2:+80422826 | MS.gene06402:CDS |
CATCTGATATGCATGAAAGA+AGG | 0.546601 | 3.2:-80422264 | None:intergenic |
TTGTGAATATGTCATCACTA+AGG | 0.547067 | 3.2:+80423165 | MS.gene06402:CDS |
GAGTCAGATTCATGTCTAGT+TGG | 0.553408 | 3.2:-80423139 | None:intergenic |
ATGAAGGAAGCATTGACACT+TGG | 0.556729 | 3.2:+80422842 | MS.gene06402:CDS |
CTGTGAATTTCTTTGAGGTG+GGG | 0.560693 | 3.2:-80423737 | None:intergenic |
CTCACCATGGTTTATGCACA+TGG | 0.561626 | 3.2:+80422609 | MS.gene06402:CDS |
AAGTGGTCTATTGGCATCGT+TGG | 0.563557 | 3.2:-80422390 | None:intergenic |
CCGGAGAGCCGAGTCTAGAA+CGG | 0.566334 | 3.2:+80421890 | MS.gene06402:CDS |
CGAAATGTTCAAGAAAGCAA+TGG | 0.571716 | 3.2:+80423528 | MS.gene06402:CDS |
ACACAAGCTATAGAAAATGA+TGG | 0.577177 | 3.2:+80423559 | MS.gene06402:CDS |
CCCACCTCAAAGAAATTCAC+AGG | 0.578108 | 3.2:+80423738 | MS.gene06402:CDS |
ATCACTAAGGAAAATCATGA+AGG | 0.579406 | 3.2:+80423178 | MS.gene06402:CDS |
TTCTATGTGATCGAAGCATG+TGG | 0.582014 | 3.2:-80422013 | None:intergenic |
AGTCCTCACATAAGCTTGCA+AGG | 0.585698 | 3.2:+80423008 | MS.gene06402:CDS |
AATACTAATCCAAATGGGAA+AGG | 0.589514 | 3.2:+80423051 | MS.gene06402:CDS |
GCAGGGCATAGAGCTAATGT+TGG | 0.592621 | 3.2:+80422125 | MS.gene06402:CDS |
AACTTATGAGCACACATGCA+GGG | 0.596381 | 3.2:+80422108 | MS.gene06402:CDS |
CCAAAGTCAAGCAATGTCTA+GGG | 0.598556 | 3.2:+80422562 | MS.gene06402:CDS |
TCTGATGCTATACAACCAAA+GGG | 0.598723 | 3.2:+80423604 | MS.gene06402:CDS |
TGTTTCTAAGTTCATTAGAG+CGG | 0.599783 | 3.2:+80423450 | MS.gene06402:CDS |
GCATCAGAACTCACAAATGA+CGG | 0.601171 | 3.2:-80423589 | None:intergenic |
ACGGCGATGTATCGTCATGT+AGG | 0.604688 | 3.2:+80421805 | MS.gene06402:CDS |
AACATGTCCTCACGTGCTAG+CGG | 0.607345 | 3.2:-80423906 | None:intergenic |
TGACTCTGGATTAGGGCAGA+AGG | 0.608129 | 3.2:+80422076 | MS.gene06402:CDS |
TTTGTTGTAAGGAAGGACTA+CGG | 0.614427 | 3.2:+80421832 | MS.gene06402:CDS |
GGCATCGTTGGTACAATATG+TGG | 0.617702 | 3.2:-80422378 | None:intergenic |
ACATGGCACTTGTTGCAGAA+TGG | 0.627403 | 3.2:+80422626 | MS.gene06402:CDS |
ATGTCCTCACGTGCTAGCGG+GGG | 0.629467 | 3.2:-80423903 | None:intergenic |
GGAAATGGAATGAAGAAAGG+AGG | 0.638695 | 3.2:+80422662 | MS.gene06402:CDS |
TGATATGCATGAAAGAAGGA+CGG | 0.649185 | 3.2:-80422260 | None:intergenic |
TAACCTTGCAAGCTTATGTG+AGG | 0.652535 | 3.2:-80423011 | None:intergenic |
CACTATTATCAAGAAGCATG+AGG | 0.669252 | 3.2:-80423501 | None:intergenic |
TCTATGTGATCGAAGCATGT+GGG | 0.671774 | 3.2:-80422012 | None:intergenic |
ATATTTGTAACATCATCAAG+AGG | 0.673556 | 3.2:-80424054 | None:intergenic |
GGGCTCATAAGTTGGAGGCG+CGG | 0.683549 | 3.2:-80423883 | None:intergenic |
TAATGTTGGATATACAGAAG+TGG | 0.683641 | 3.2:+80422139 | MS.gene06402:CDS |
TTTACAAACAAGAACAAACA+CGG | 0.696353 | 3.2:+80421786 | MS.gene06402:CDS |
GTGATGCCTGAGACTCACCA+TGG | 0.716138 | 3.2:+80422596 | MS.gene06402:CDS |
AGTGCCATGTGCATAAACCA+TGG | 0.773388 | 3.2:-80422613 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAATAATTAATATCC+AGG | - | chr3.2:80423988-80424007 | None:intergenic | 10.0% |
!!! | TTATTTCTTATTATTAATGT+AGG | + | chr3.2:80424029-80424048 | MS.gene06402:intron | 10.0% |
!! | ATAATCTTCACAATAATAAT+TGG | + | chr3.2:80422774-80422793 | MS.gene06402:CDS | 15.0% |
!! | TATAAAATTAACAACTCAAA+TGG | + | chr3.2:80423842-80423861 | MS.gene06402:CDS | 15.0% |
!! | TTATGCCATTAAAAAAAAAT+GGG | + | chr3.2:80422808-80422827 | MS.gene06402:CDS | 15.0% |
!! | TTTATGCCATTAAAAAAAAA+TGG | + | chr3.2:80422807-80422826 | MS.gene06402:CDS | 15.0% |
!!! | TAGTTTTACATAATCATTTT+AGG | + | chr3.2:80423818-80423837 | MS.gene06402:intron | 15.0% |
!!! | AATTTCATATCATTTTCATG+AGG | + | chr3.2:80423956-80423975 | MS.gene06402:intron | 20.0% |
! | AGACAATTCCATCATTTAAA+TGG | + | chr3.2:80422480-80422499 | MS.gene06402:CDS | 25.0% |
! | ATATTTGTAACATCATCAAG+AGG | - | chr3.2:80424057-80424076 | None:intergenic | 25.0% |
! | CAAAATGTTTGAAGAATTGT+AGG | - | chr3.2:80422940-80422959 | None:intergenic | 25.0% |
! | CTTCTTAAAATATACTTCTC+AGG | - | chr3.2:80423331-80423350 | None:intergenic | 25.0% |
! | GAGAAAAAATATGCATATGA+AGG | + | chr3.2:80421861-80421880 | MS.gene06402:CDS | 25.0% |
! | GTTTGAATTGAATGATGTTA+AGG | + | chr3.2:80423300-80423319 | MS.gene06402:CDS | 25.0% |
! | TACAAAAAGAAAAAGAAGCA+TGG | + | chr3.2:80422181-80422200 | MS.gene06402:CDS | 25.0% |
! | TCAAACAACCATTTAAATGA+TGG | - | chr3.2:80422491-80422510 | None:intergenic | 25.0% |
! | TGGAATGAAATTTGATACTA+TGG | + | chr3.2:80421701-80421720 | MS.gene06402:CDS | 25.0% |
! | TGTAAGATGTATGATACATT+TGG | + | chr3.2:80423250-80423269 | MS.gene06402:CDS | 25.0% |
! | TTTACAAACAAGAACAAACA+CGG | + | chr3.2:80421786-80421805 | MS.gene06402:CDS | 25.0% |
!! | CAAAAATGATTTTGGATTAC+GGG | + | chr3.2:80422327-80422346 | MS.gene06402:CDS | 25.0% |
!! | GCAAAAATGATTTTGGATTA+CGG | + | chr3.2:80422326-80422345 | MS.gene06402:CDS | 25.0% |
!! | TGATGATGTTACAAATATTC+AGG | + | chr3.2:80424059-80424078 | MS.gene06402:CDS | 25.0% |
!!! | AGAAGTATATTTTAAGAAGG+TGG | + | chr3.2:80423332-80423351 | MS.gene06402:CDS | 25.0% |
!!! | CTGAGAAGTATATTTTAAGA+AGG | + | chr3.2:80423329-80423348 | MS.gene06402:CDS | 25.0% |
AAAAAAAGCAAGTGGTCTAT+TGG | - | chr3.2:80422402-80422421 | None:intergenic | 30.0% | |
AAACCAGAAAAAAAAGCAAG+TGG | - | chr3.2:80422410-80422429 | None:intergenic | 30.0% | |
AAATGATCGTACCTCTATAA+TGG | - | chr3.2:80422436-80422455 | None:intergenic | 30.0% | |
AACAAATTACAAACGTGTTC+TGG | + | chr3.2:80422297-80422316 | MS.gene06402:CDS | 30.0% | |
AATACTAATCCAAATGGGAA+AGG | + | chr3.2:80423051-80423070 | MS.gene06402:CDS | 30.0% | |
AATTGTAGGATACCCAAATT+CGG | - | chr3.2:80422926-80422945 | None:intergenic | 30.0% | |
ACAAGCAAATGAGATTGATA+TGG | + | chr3.2:80422049-80422068 | MS.gene06402:CDS | 30.0% | |
ACACAAGCTATAGAAAATGA+TGG | + | chr3.2:80423559-80423578 | MS.gene06402:CDS | 30.0% | |
ATCACTAAGGAAAATCATGA+AGG | + | chr3.2:80423178-80423197 | MS.gene06402:CDS | 30.0% | |
ATGCATATGAAGGAAAAATC+CGG | + | chr3.2:80421871-80421890 | MS.gene06402:CDS | 30.0% | |
ATTACACTTTCACGTCAAAA+TGG | + | chr3.2:80421927-80421946 | MS.gene06402:CDS | 30.0% | |
CAGAATGGAATTAAACATCT+TGG | + | chr3.2:80422641-80422660 | MS.gene06402:CDS | 30.0% | |
CATCTTACAACTACAAGTAA+TGG | - | chr3.2:80423239-80423258 | None:intergenic | 30.0% | |
GAAATTTGATACTATGGAAG+AGG | + | chr3.2:80421707-80421726 | MS.gene06402:CDS | 30.0% | |
GGAATTAAACATCTTGGAAA+TGG | + | chr3.2:80422647-80422666 | MS.gene06402:CDS | 30.0% | |
TAATGTTGGATATACAGAAG+TGG | + | chr3.2:80422139-80422158 | MS.gene06402:CDS | 30.0% | |
TAGTTACACAACTATGATGA+TGG | + | chr3.2:80423932-80423951 | MS.gene06402:CDS | 30.0% | |
TATACCTGTGAATTTCTTTG+AGG | - | chr3.2:80423745-80423764 | None:intergenic | 30.0% | |
TCAAATTTCATTCCAAGTCT+TGG | - | chr3.2:80421696-80421715 | None:intergenic | 30.0% | |
TCACCAATACTAATCCAAAT+GGG | + | chr3.2:80423046-80423065 | MS.gene06402:CDS | 30.0% | |
TGACATCTTCAAATGTTGAT+TGG | + | chr3.2:80421667-80421686 | MS.gene06402:CDS | 30.0% | |
TTAACAACTCAAATGGTTGA+TGG | + | chr3.2:80423849-80423868 | MS.gene06402:CDS | 30.0% | |
TTCACCAATACTAATCCAAA+TGG | + | chr3.2:80423045-80423064 | MS.gene06402:CDS | 30.0% | |
TTGTGAATATGTCATCACTA+AGG | + | chr3.2:80423165-80423184 | MS.gene06402:CDS | 30.0% | |
! | ATTCGATTTCTAGACAACTT+AGG | - | chr3.2:80423418-80423437 | None:intergenic | 30.0% |
! | ATTTTGGATTACGGGTATTT+TGG | + | chr3.2:80422335-80422354 | MS.gene06402:CDS | 30.0% |
! | GTGTGATGCAAAAATGATTT+TGG | + | chr3.2:80422319-80422338 | MS.gene06402:CDS | 30.0% |
! | TATGTTTTCCTTCAAACTCA+TGG | - | chr3.2:80421965-80421984 | None:intergenic | 30.0% |
! | TGTTTCTAAGTTCATTAGAG+CGG | + | chr3.2:80423450-80423469 | MS.gene06402:CDS | 30.0% |
!! | ATGTAGGTTTGTTTGTTGTA+AGG | + | chr3.2:80421821-80421840 | MS.gene06402:CDS | 30.0% |
!! | TATAGAGGTACGATCATTTT+TGG | + | chr3.2:80422437-80422456 | MS.gene06402:CDS | 30.0% |
!! | TTTCCCATTTGGATTAGTAT+TGG | - | chr3.2:80423052-80423071 | None:intergenic | 30.0% |
!!! | TGCAGCCCATTTTTTTTTAA+TGG | - | chr3.2:80422816-80422835 | None:intergenic | 30.0% |
!!! | TTTTGGTGATGTTGTTTCAT+TGG | + | chr3.2:80422352-80422371 | MS.gene06402:CDS | 30.0% |
AATCTTGCACAATGCCATAA+CGG | - | chr3.2:80423369-80423388 | None:intergenic | 35.0% | |
AGGAAAATCATGAAGGATCT+TGG | + | chr3.2:80423185-80423204 | MS.gene06402:CDS | 35.0% | |
CATCTGATATGCATGAAAGA+AGG | - | chr3.2:80422267-80422286 | None:intergenic | 35.0% | |
CGAAATGTTCAAGAAAGCAA+TGG | + | chr3.2:80423528-80423547 | MS.gene06402:CDS | 35.0% | |
CTAGTTTGAGCATGTTTACT+TGG | - | chr3.2:80423712-80423731 | None:intergenic | 35.0% | |
CTTCTTTCATGCATATCAGA+TGG | + | chr3.2:80422265-80422284 | MS.gene06402:CDS | 35.0% | |
CTTGGAAATGGAATGAAGAA+AGG | + | chr3.2:80422659-80422678 | MS.gene06402:CDS | 35.0% | |
GTATTTCCAACAGCAATTGT+TGG | + | chr3.2:80422232-80422251 | MS.gene06402:CDS | 35.0% | |
TCTGATGCTATACAACCAAA+GGG | + | chr3.2:80423604-80423623 | MS.gene06402:CDS | 35.0% | |
TGATATGCATGAAAGAAGGA+CGG | - | chr3.2:80422263-80422282 | None:intergenic | 35.0% | |
TGTCTAGAAATCGAATGTTC+AGG | + | chr3.2:80423422-80423441 | MS.gene06402:CDS | 35.0% | |
TTCTGATGCTATACAACCAA+AGG | + | chr3.2:80423603-80423622 | MS.gene06402:CDS | 35.0% | |
! | AGAAAAAGAAGCATGGTGTA+TGG | + | chr3.2:80422188-80422207 | MS.gene06402:CDS | 35.0% |
! | AGTTTGTCTGAAACCGAATT+TGG | + | chr3.2:80422910-80422929 | MS.gene06402:CDS | 35.0% |
! | ATGGCATTGTGCAAGATTTT+AGG | + | chr3.2:80423371-80423390 | MS.gene06402:CDS | 35.0% |
! | CACTATTATCAAGAAGCATG+AGG | - | chr3.2:80423504-80423523 | None:intergenic | 35.0% |
! | GTTTGTCTGAAACCGAATTT+GGG | + | chr3.2:80422911-80422930 | MS.gene06402:CDS | 35.0% |
! | TCTGGTTTCAACCATTATAG+AGG | + | chr3.2:80422422-80422441 | MS.gene06402:CDS | 35.0% |
! | TGGCATTGTGCAAGATTTTA+GGG | + | chr3.2:80423372-80423391 | MS.gene06402:CDS | 35.0% |
! | TTTGTTGTAAGGAAGGACTA+CGG | + | chr3.2:80421832-80421851 | MS.gene06402:CDS | 35.0% |
!! | AAGCAGATTTTGAGAAAGCT+TGG | + | chr3.2:80422732-80422751 | MS.gene06402:CDS | 35.0% |
!! | AGCAGATTTTGAGAAAGCTT+GGG | + | chr3.2:80422733-80422752 | MS.gene06402:CDS | 35.0% |
!! | AGGTTTGTTTGTTGTAAGGA+AGG | + | chr3.2:80421825-80421844 | MS.gene06402:CDS | 35.0% |
!! | TCTCTCGTTTTAGTAGATCA+TGG | - | chr3.2:80421989-80422008 | None:intergenic | 35.0% |
!!! | AGACCACTTGCTTTTTTTTC+TGG | + | chr3.2:80422404-80422423 | MS.gene06402:CDS | 35.0% |
!!! | GAACAATTTTGGCTTGCTTA+CGG | + | chr3.2:80421732-80421751 | MS.gene06402:CDS | 35.0% |
AAAGGAGGTTCTTTGCTAAG+AGG | + | chr3.2:80422677-80422696 | MS.gene06402:CDS | 40.0% | |
AACTTATGAGCACACATGCA+GGG | + | chr3.2:80422108-80422127 | MS.gene06402:CDS | 40.0% | |
AAGAAACATGCTCCTCCAAA+GGG | + | chr3.2:80423631-80423650 | MS.gene06402:CDS | 40.0% | |
ACCAAAGTCAAGCAATGTCT+AGG | + | chr3.2:80422561-80422580 | MS.gene06402:CDS | 40.0% | |
ATCTTGCACAATGCCATAAC+GGG | - | chr3.2:80423368-80423387 | None:intergenic | 40.0% | |
ATTGATATGGCTGATGACTC+TGG | + | chr3.2:80422062-80422081 | MS.gene06402:CDS | 40.0% | |
CCAAAGTCAAGCAATGTCTA+GGG | + | chr3.2:80422562-80422581 | MS.gene06402:CDS | 40.0% | |
GAGTCAGATTCATGTCTAGT+TGG | - | chr3.2:80423142-80423161 | None:intergenic | 40.0% | |
GATTCTCCAACAATTGCTGT+TGG | - | chr3.2:80422241-80422260 | None:intergenic | 40.0% | |
GCATCAGAACTCACAAATGA+CGG | - | chr3.2:80423592-80423611 | None:intergenic | 40.0% | |
GCATGTTTCTTGAATCCCTT+TGG | - | chr3.2:80423622-80423641 | None:intergenic | 40.0% | |
GGAAATGGAATGAAGAAAGG+AGG | + | chr3.2:80422662-80422681 | MS.gene06402:CDS | 40.0% | |
GTGTGTATACCTTTCCCATT+TGG | - | chr3.2:80423063-80423082 | None:intergenic | 40.0% | |
GTTTGAGCATGTTTACTTGG+AGG | - | chr3.2:80423709-80423728 | None:intergenic | 40.0% | |
TAACCTTGCAAGCTTATGTG+AGG | - | chr3.2:80423014-80423033 | None:intergenic | 40.0% | |
TCTATGTGATCGAAGCATGT+GGG | - | chr3.2:80422015-80422034 | None:intergenic | 40.0% | |
TTCACGTCAAAATGGAAAGC+TGG | + | chr3.2:80421935-80421954 | MS.gene06402:CDS | 40.0% | |
TTCTATGTGATCGAAGCATG+TGG | - | chr3.2:80422016-80422035 | None:intergenic | 40.0% | |
! | ACCTGTGAATTTCTTTGAGG+TGG | - | chr3.2:80423742-80423761 | None:intergenic | 40.0% |
! | ATGGGCTGCATGTTATATGA+AGG | + | chr3.2:80422826-80422845 | MS.gene06402:CDS | 40.0% |
! | ATTTTCATGAGGAACTGTCC+TGG | + | chr3.2:80423967-80423986 | MS.gene06402:intron | 40.0% |
! | GGCATTGTGCAAGATTTTAG+GGG | + | chr3.2:80423373-80423392 | MS.gene06402:CDS | 40.0% |
! | TAAGCAATCCGTTCTAGACT+CGG | - | chr3.2:80421901-80421920 | None:intergenic | 40.0% |
! | TGGAAGAGGCTGAACAATTT+TGG | + | chr3.2:80421721-80421740 | MS.gene06402:CDS | 40.0% |
! | TTATGTCGCTTAGTTCCCTT+TGG | - | chr3.2:80423649-80423668 | None:intergenic | 40.0% |
!! | ATGAAGGAAGCATTGACACT+TGG | + | chr3.2:80422842-80422861 | MS.gene06402:CDS | 40.0% |
!! | CCTGTGAATTTCTTTGAGGT+GGG | - | chr3.2:80423741-80423760 | None:intergenic | 40.0% |
!! | CTGTGAATTTCTTTGAGGTG+GGG | - | chr3.2:80423740-80423759 | None:intergenic | 40.0% |
!! | TGTGCAAGATTTTAGGGGAA+AGG | + | chr3.2:80423378-80423397 | MS.gene06402:CDS | 40.0% |
AAGTGGTCTATTGGCATCGT+TGG | - | chr3.2:80422393-80422412 | None:intergenic | 45.0% | |
AGTCCTCACATAAGCTTGCA+AGG | + | chr3.2:80423008-80423027 | MS.gene06402:CDS | 45.0% | |
AGTGCCATGTGCATAAACCA+TGG | - | chr3.2:80422616-80422635 | None:intergenic | 45.0% | |
ATGGCTGATGACTCTGGATT+AGG | + | chr3.2:80422068-80422087 | MS.gene06402:CDS | 45.0% | |
CAACTTATGAGCACACATGC+AGG | + | chr3.2:80422107-80422126 | MS.gene06402:CDS | 45.0% | |
CAAGAAACATGCTCCTCCAA+AGG | + | chr3.2:80423630-80423649 | MS.gene06402:CDS | 45.0% | |
CATAAACCATGGTGAGTCTC+AGG | - | chr3.2:80422605-80422624 | None:intergenic | 45.0% | |
CCCACCTCAAAGAAATTCAC+AGG | + | chr3.2:80423738-80423757 | MS.gene06402:CDS | 45.0% | |
CCCTAGACATTGCTTGACTT+TGG | - | chr3.2:80422565-80422584 | None:intergenic | 45.0% | |
CTCACCATGGTTTATGCACA+TGG | + | chr3.2:80422609-80422628 | MS.gene06402:CDS | 45.0% | |
CTGGTCATCCATGAGTTTGA+AGG | + | chr3.2:80421954-80421973 | MS.gene06402:CDS | 45.0% | |
GGCATCGTTGGTACAATATG+TGG | - | chr3.2:80422381-80422400 | None:intergenic | 45.0% | |
GTTGATTGGAAGCCAAGACT+TGG | + | chr3.2:80421681-80421700 | MS.gene06402:CDS | 45.0% | |
TGGCTGATGACTCTGGATTA+GGG | + | chr3.2:80422069-80422088 | MS.gene06402:CDS | 45.0% | |
TGGTCAGTGAAGATCGTCTT+TGG | - | chr3.2:80422545-80422564 | None:intergenic | 45.0% | |
! | ACATGGCACTTGTTGCAGAA+TGG | + | chr3.2:80422626-80422645 | MS.gene06402:CDS | 45.0% |
! | CTTGCTTACGGTTTTCGTGA+GGG | + | chr3.2:80421744-80421763 | MS.gene06402:CDS | 45.0% |
! | TTTTCTTAGGCTGACGCTCA+AGG | - | chr3.2:80423678-80423697 | None:intergenic | 45.0% |
!! | GCAAGATTTTAGGGGAAAGG+AGG | + | chr3.2:80423381-80423400 | MS.gene06402:CDS | 45.0% |
!! | TGAGAAAGCTTGGGTTGACT+TGG | + | chr3.2:80422742-80422761 | MS.gene06402:CDS | 45.0% |
!!! | GGAGGAGCACTTCTTTTCTT+AGG | - | chr3.2:80423691-80423710 | None:intergenic | 45.0% |
AACATGTCCTCACGTGCTAG+CGG | - | chr3.2:80423909-80423928 | None:intergenic | 50.0% | |
ACGGCGATGTATCGTCATGT+AGG | + | chr3.2:80421805-80421824 | MS.gene06402:CDS | 50.0% | |
GCAGGGCATAGAGCTAATGT+TGG | + | chr3.2:80422125-80422144 | MS.gene06402:CDS | 50.0% | |
TGGACAAGAGAAGCCCGTTA+TGG | + | chr3.2:80423352-80423371 | MS.gene06402:CDS | 50.0% | |
! | GCTTGCTTACGGTTTTCGTG+AGG | + | chr3.2:80421743-80421762 | MS.gene06402:CDS | 50.0% |
! | TACGGTTTTCGTGAGGGCTT+CGG | + | chr3.2:80421750-80421769 | MS.gene06402:CDS | 50.0% |
! | TGACTCTGGATTAGGGCAGA+AGG | + | chr3.2:80422076-80422095 | MS.gene06402:CDS | 50.0% |
! | TGTCGCTTAGTTCCCTTTGG+AGG | - | chr3.2:80423646-80423665 | None:intergenic | 50.0% |
ACATGTCCTCACGTGCTAGC+GGG | - | chr3.2:80423908-80423927 | None:intergenic | 55.0% | |
GTGATGCCTGAGACTCACCA+TGG | + | chr3.2:80422596-80422615 | MS.gene06402:CDS | 55.0% | |
AGCATGGTGTATGGCGACGC+TGG | + | chr3.2:80422197-80422216 | MS.gene06402:CDS | 60.0% | |
ATGTCCTCACGTGCTAGCGG+GGG | - | chr3.2:80423906-80423925 | None:intergenic | 60.0% | |
CATGTCCTCACGTGCTAGCG+GGG | - | chr3.2:80423907-80423926 | None:intergenic | 60.0% | |
CCGGAGAGCCGAGTCTAGAA+CGG | + | chr3.2:80421890-80421909 | MS.gene06402:CDS | 60.0% | |
GCTAGCGGGGGCTCATAAGT+TGG | - | chr3.2:80423894-80423913 | None:intergenic | 60.0% | |
! | AGCGGGGGCTCATAAGTTGG+AGG | - | chr3.2:80423891-80423910 | None:intergenic | 60.0% |
! | CCGTTCTAGACTCGGCTCTC+CGG | - | chr3.2:80421893-80421912 | None:intergenic | 60.0% |
! | GGGCTCATAAGTTGGAGGCG+CGG | - | chr3.2:80423886-80423905 | None:intergenic | 60.0% |
TGAGCCCCCGCTAGCACGTG+AGG | + | chr3.2:80423899-80423918 | MS.gene06402:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 80421666 | 80424092 | 80421666 | ID=MS.gene06402 |
chr3.2 | mRNA | 80421666 | 80424092 | 80421666 | ID=MS.gene06402.t1;Parent=MS.gene06402 |
chr3.2 | exon | 80421666 | 80423759 | 80421666 | ID=MS.gene06402.t1.exon1;Parent=MS.gene06402.t1 |
chr3.2 | CDS | 80421666 | 80423759 | 80421666 | ID=cds.MS.gene06402.t1;Parent=MS.gene06402.t1 |
chr3.2 | exon | 80423840 | 80423953 | 80423840 | ID=MS.gene06402.t1.exon2;Parent=MS.gene06402.t1 |
chr3.2 | CDS | 80423840 | 80423953 | 80423840 | ID=cds.MS.gene06402.t1;Parent=MS.gene06402.t1 |
chr3.2 | exon | 80424051 | 80424092 | 80424051 | ID=MS.gene06402.t1.exon3;Parent=MS.gene06402.t1 |
chr3.2 | CDS | 80424051 | 80424092 | 80424051 | ID=cds.MS.gene06402.t1;Parent=MS.gene06402.t1 |
Gene Sequence |
Protein sequence |