AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064224

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064224.t1 MTR_0008s0470 81.176 255 35 3 9 257 44 291 4.84e-136 385
MS.gene064224.t1 MTR_0008s0390 77.200 250 35 3 9 257 44 272 1.04e-122 350
MS.gene064224.t1 MTR_0251s0050 68.924 251 54 6 9 257 44 272 2.55e-100 293
MS.gene064224.t1 MTR_2g089420 38.023 263 126 5 9 236 42 302 1.11e-51 174
MS.gene064224.t1 MTR_1g076150 47.205 161 71 3 9 168 43 190 2.33e-38 135
MS.gene064224.t1 MTR_2g089450 35.849 265 94 10 9 257 43 247 4.70e-38 134
MS.gene064224.t1 MTR_1g043050 64.516 93 31 1 12 102 46 138 8.98e-37 130
MS.gene064224.t1 MTR_1g043080 76.389 72 17 0 12 83 46 117 1.31e-36 130
MS.gene064224.t1 MTR_7g096930 69.412 85 24 1 12 96 46 128 1.69e-35 128
MS.gene064224.t1 MTR_4g100720 71.053 76 22 0 7 82 42 117 1.19e-34 123
MS.gene064224.t1 MTR_0197s0010 50.442 113 55 1 9 121 32 143 1.63e-34 124
MS.gene064224.t1 MTR_4g125520 60.000 100 37 1 4 100 35 134 2.78e-34 125
MS.gene064224.t1 MTR_7g115650 65.854 82 28 0 11 92 45 126 3.30e-34 122
MS.gene064224.t1 MTR_1g112760 60.000 85 29 1 4 83 34 118 1.30e-33 122
MS.gene064224.t1 MTR_3g077110 61.176 85 28 1 4 83 33 117 1.57e-33 124
MS.gene064224.t1 MTR_4g105130 42.857 147 68 2 12 158 46 176 2.16e-33 124
MS.gene064224.t1 MTR_3g097450 55.556 108 43 2 11 114 45 151 2.29e-33 123
MS.gene064224.t1 MTR_0008s0280 69.565 69 21 0 12 80 46 114 2.43e-33 121
MS.gene064224.t1 MTR_1g085040 70.270 74 22 0 9 82 43 116 3.12e-33 124
MS.gene064224.t1 MTR_1g100653 72.222 72 20 0 11 82 45 116 3.95e-33 122
MS.gene064224.t1 MTR_8g027345 69.333 75 23 0 11 85 45 119 8.52e-33 121
MS.gene064224.t1 MTR_2g097910 71.831 71 20 0 12 82 54 124 1.50e-32 121
MS.gene064224.t1 MTR_8g031360 68.000 75 24 0 9 83 45 119 1.94e-32 120
MS.gene064224.t1 MTR_4g073420 63.514 74 27 0 11 84 45 118 2.57e-32 120
MS.gene064224.t1 MTR_1g085640 70.423 71 21 0 12 82 46 116 3.01e-32 122
MS.gene064224.t1 MTR_5g079670 65.000 80 27 1 11 89 44 123 3.83e-32 117
MS.gene064224.t1 MTR_7g110830 70.423 71 21 0 12 82 46 116 4.00e-32 121
MS.gene064224.t1 MTR_4g065017 62.069 87 30 1 12 95 51 137 4.16e-32 120
MS.gene064224.t1 MTR_3g028740 72.222 72 20 0 11 82 55 126 4.31e-32 120
MS.gene064224.t1 MTR_7g117730 69.444 72 22 0 11 82 45 116 4.67e-32 118
MS.gene064224.t1 MTR_4g102380 65.333 75 26 0 9 83 43 117 5.26e-32 119
MS.gene064224.t1 MTR_7g076740 70.423 71 21 0 12 82 47 117 6.26e-32 119
MS.gene064224.t1 MTR_1g017000 61.842 76 29 0 12 87 47 122 7.14e-32 118
MS.gene064224.t1 MTR_0063s0090 66.197 71 24 0 9 79 43 113 1.19e-31 116
MS.gene064224.t1 MTR_8g095390 65.278 72 25 0 11 82 45 116 1.29e-31 119
MS.gene064224.t1 MTR_2g064160 65.333 75 26 0 9 83 42 116 1.63e-31 118
MS.gene064224.t1 MTR_3g074520 65.333 75 26 0 9 83 43 117 1.93e-31 119
MS.gene064224.t1 MTR_5g029840 65.753 73 25 0 11 83 45 117 2.57e-31 118
MS.gene064224.t1 MTR_4g082290 71.831 71 20 0 12 82 46 116 3.74e-31 119
MS.gene064224.t1 MTR_1g100667 68.056 72 23 0 11 82 46 117 4.38e-31 116
MS.gene064224.t1 MTR_4g082230 71.831 71 20 0 12 82 46 116 4.68e-31 119
MS.gene064224.t1 MTR_2g089620 67.123 73 24 0 11 83 45 117 5.16e-31 117
MS.gene064224.t1 MTR_6g090405 66.667 72 24 0 12 83 47 118 5.70e-31 115
MS.gene064224.t1 MTR_4g478180 65.333 75 26 0 9 83 44 118 7.56e-31 117
MS.gene064224.t1 MTR_4g091490 66.667 72 24 0 12 83 47 118 7.96e-31 117
MS.gene064224.t1 MTR_3g083540 61.039 77 30 0 11 87 74 150 9.96e-31 116
MS.gene064224.t1 MTR_2g011660 66.667 72 24 0 12 83 47 118 1.17e-30 117
MS.gene064224.t1 MTR_7g011170 70.423 71 21 0 12 82 46 116 1.42e-30 115
MS.gene064224.t1 MTR_6g006030 42.069 145 81 2 7 150 43 185 1.55e-30 113
MS.gene064224.t1 MTR_8g017390 64.935 77 25 1 12 86 47 123 1.69e-30 118
MS.gene064224.t1 MTR_3g065440 54.639 97 43 1 9 105 43 138 1.79e-30 115
MS.gene064224.t1 MTR_3g461490 65.278 72 25 0 11 82 45 116 2.20e-30 115
MS.gene064224.t1 MTR_4g121460 63.889 72 26 0 11 82 45 116 2.44e-30 115
MS.gene064224.t1 MTR_4g485530 63.750 80 28 1 11 89 45 124 2.71e-30 112
MS.gene064224.t1 MTR_8g020490 63.158 76 28 0 7 82 37 112 2.72e-30 114
MS.gene064224.t1 MTR_5g079290 54.167 96 41 1 11 103 50 145 3.08e-30 114
MS.gene064224.t1 MTR_8g017540 60.759 79 30 1 11 88 91 169 3.23e-30 116
MS.gene064224.t1 MTR_5g042030 66.667 72 24 0 12 83 41 112 3.90e-30 114
MS.gene064224.t1 MTR_2g099740 66.667 72 24 0 12 83 46 117 4.11e-30 116
MS.gene064224.t1 MTR_5g007370 62.667 75 28 0 9 83 43 117 5.39e-30 114
MS.gene064224.t1 MTR_8g017340 64.103 78 27 1 12 88 47 124 5.56e-30 117
MS.gene064224.t1 MTR_8g017440 63.889 72 26 0 11 82 45 116 6.63e-30 114
MS.gene064224.t1 MTR_5g078140 62.162 74 28 0 9 82 43 116 6.94e-30 114
MS.gene064224.t1 MTR_6g012690 69.014 71 22 0 12 82 46 116 7.39e-30 115
MS.gene064224.t1 MTR_7g010210 44.231 156 68 4 12 148 46 201 7.49e-30 113
MS.gene064224.t1 MTR_5g014990 61.644 73 28 0 11 83 46 118 7.89e-30 114
MS.gene064224.t1 MTR_8g042410 65.714 70 24 0 12 81 71 140 8.83e-30 117
MS.gene064224.t1 MTR_7g010210 67.606 71 23 0 12 82 46 116 8.97e-30 114
MS.gene064224.t1 MTR_7g035075 41.722 151 76 2 7 152 43 186 1.14e-29 110
MS.gene064224.t1 MTR_2g067420 71.212 66 19 0 11 76 47 112 1.33e-29 114
MS.gene064224.t1 MTR_4g057635 54.945 91 35 1 4 88 33 123 1.47e-29 113
MS.gene064224.t1 MTR_8g017500 64.789 71 25 0 12 82 46 116 1.67e-29 114
MS.gene064224.t1 MTR_8g098860 63.889 72 26 0 11 82 45 116 1.81e-29 113
MS.gene064224.t1 MTR_2g034790 61.111 72 28 0 11 82 45 116 1.87e-29 113
MS.gene064224.t1 MTR_5g078910 66.667 72 24 0 12 83 41 112 2.10e-29 112
MS.gene064224.t1 MTR_8g017350 62.821 78 28 1 12 88 47 124 2.10e-29 116
MS.gene064224.t1 MTR_8g060940 70.588 68 20 0 11 78 40 107 2.50e-29 111
MS.gene064224.t1 MTR_3g011610 64.789 71 25 0 12 82 71 141 2.67e-29 115
MS.gene064224.t1 MTR_6g055910 52.577 97 34 1 9 105 16 100 2.70e-29 111
MS.gene064224.t1 MTR_0001s0360 49.573 117 55 2 12 125 41 156 3.13e-29 111
MS.gene064224.t1 MTR_1g073170 53.261 92 40 1 7 98 49 137 4.26e-29 110
MS.gene064224.t1 MTR_1g086530 61.842 76 29 0 7 82 62 137 4.32e-29 111
MS.gene064224.t1 MTR_4g063100 61.333 75 29 0 7 81 36 110 5.18e-29 110
MS.gene064224.t1 MTR_3g052430 46.491 114 50 2 12 117 75 185 5.60e-29 114
MS.gene064224.t1 MTR_5g078800 44.667 150 74 4 11 154 40 186 5.74e-29 110
MS.gene064224.t1 MTR_3g103570 61.644 73 28 0 11 83 46 118 5.86e-29 112
MS.gene064224.t1 MTR_1g045610 55.682 88 39 0 7 94 50 137 6.16e-29 110
MS.gene064224.t1 MTR_1g110460 63.158 76 28 0 7 82 55 130 7.61e-29 111
MS.gene064224.t1 MTR_7g111290 71.875 64 18 0 12 75 4 67 8.10e-29 112
MS.gene064224.t1 MTR_4g063100 64.286 70 25 0 12 81 12 81 8.78e-29 109
MS.gene064224.t1 MTR_1g017140 60.274 73 29 0 11 83 46 118 9.38e-29 111
MS.gene064224.t1 MTR_5g079220 51.546 97 43 1 11 103 54 150 9.68e-29 110
MS.gene064224.t1 MTR_5g078950 70.588 68 20 0 12 79 41 108 1.27e-28 109
MS.gene064224.t1 MTR_6g055910 54.255 94 31 1 12 105 48 129 1.42e-28 110
MS.gene064224.t1 MTR_7g017260 51.579 95 44 1 11 103 60 154 1.50e-28 109
MS.gene064224.t1 MTR_3g052450 60.000 70 28 0 12 81 74 143 2.72e-28 112
MS.gene064224.t1 MTR_5g078860 55.670 97 38 1 12 103 41 137 3.20e-28 109
MS.gene064224.t1 MTR_7g111290 68.657 67 21 0 9 75 43 109 3.60e-28 110
MS.gene064224.t1 MTR_7g102110 54.651 86 33 1 4 83 33 118 4.66e-28 108
MS.gene064224.t1 MTR_5g010020 67.692 65 21 0 12 76 46 110 8.09e-28 109
MS.gene064224.t1 MTR_5g079120 53.125 96 41 2 12 103 95 190 1.06e-27 108
MS.gene064224.t1 MTR_6g009430 61.644 73 28 0 11 83 45 117 1.06e-27 108
MS.gene064224.t1 MTR_1g062940 37.500 168 80 3 7 174 35 177 1.64e-27 105
MS.gene064224.t1 MTR_2g096380 55.696 79 35 0 7 85 35 113 1.95e-27 105
MS.gene064224.t1 MTR_7g087130 64.789 71 25 0 12 82 46 116 2.83e-27 107
MS.gene064224.t1 MTR_2g096380 58.904 73 30 0 12 84 21 93 3.58e-27 104
MS.gene064224.t1 MTR_1g086510 60.526 76 30 0 7 82 50 125 4.25e-27 105
MS.gene064224.t1 MTR_0140s0030 61.972 71 27 0 12 82 47 117 4.31e-27 107
MS.gene064224.t1 MTR_0489s0020 61.972 71 27 0 12 82 47 117 4.31e-27 107
MS.gene064224.t1 MTR_6g012180 69.231 65 20 0 12 76 46 110 5.12e-27 106
MS.gene064224.t1 MTR_1g021230 58.667 75 31 0 12 86 91 165 5.90e-27 108
MS.gene064224.t1 MTR_4g128670 58.228 79 27 1 4 76 33 111 6.09e-27 107
MS.gene064224.t1 MTR_2g095520 58.228 79 27 1 4 76 33 111 6.24e-27 106
MS.gene064224.t1 MTR_3g039990 61.972 71 27 0 12 82 47 117 8.99e-27 105
MS.gene064224.t1 MTR_0193s0090 52.174 92 42 1 11 102 40 129 2.64e-26 102
MS.gene064224.t1 MTR_4g097570 61.538 65 25 0 11 75 47 111 1.43e-25 102
MS.gene064224.t1 MTR_4g097570 55.128 78 29 1 4 75 33 110 1.45e-25 102
MS.gene064224.t1 MTR_0247s0040 43.443 122 50 1 11 113 40 161 1.58e-25 99.4
MS.gene064224.t1 MTR_5g078930 48.454 97 46 1 11 103 42 138 1.72e-24 97.8
MS.gene064224.t1 MTR_2g088170 61.972 71 27 0 11 81 62 132 2.55e-24 101
MS.gene064224.t1 MTR_1g083630 56.338 71 31 0 12 82 46 116 8.27e-24 100
MS.gene064224.t1 MTR_7g109320 62.500 72 27 0 11 82 45 116 9.46e-24 98.6
MS.gene064224.t1 MTR_2g033170 59.211 76 31 0 7 82 53 128 3.39e-23 96.7
MS.gene064224.t1 MTR_3g101290 58.571 70 29 0 13 82 69 138 8.92e-23 93.6
MS.gene064224.t1 MTR_4g123040 60.811 74 29 0 7 80 53 126 9.44e-23 95.1
MS.gene064224.t1 MTR_4g019370 38.655 119 51 1 14 110 71 189 2.23e-22 94.7
MS.gene064224.t1 MTR_5g016510 38.843 121 64 1 14 134 38 148 2.30e-22 94.0
MS.gene064224.t1 MTR_6g015455 43.396 106 53 2 14 112 38 143 4.07e-22 95.9
MS.gene064224.t1 MTR_6g074860 58.209 67 28 0 14 80 37 103 1.35e-21 90.5
MS.gene064224.t1 MTR_4g094982 52.174 69 33 0 14 82 38 106 2.30e-21 90.5
MS.gene064224.t1 MTR_3g045430 54.930 71 32 0 12 82 47 117 2.91e-21 90.9
MS.gene064224.t1 MTR_8g006470 55.714 70 30 1 12 80 44 113 3.22e-21 90.5
MS.gene064224.t1 MTR_5g062790 39.344 122 63 4 11 124 42 160 4.75e-21 90.5
MS.gene064224.t1 MTR_4g128190 35.099 151 86 5 12 150 32 182 5.23e-21 89.0
MS.gene064224.t1 MTR_5g049190 34.532 139 86 2 5 143 45 178 6.86e-21 88.6
MS.gene064224.t1 MTR_5g041570 53.623 69 32 0 13 81 166 234 8.60e-21 91.3
MS.gene064224.t1 MTR_7g451170 37.405 131 73 3 14 140 224 349 1.71e-20 90.1
MS.gene064224.t1 MTR_4g082040 52.941 68 32 0 14 81 138 205 3.96e-20 89.4
MS.gene064224.t1 MTR_5g070020 46.377 69 37 0 13 81 154 222 4.09e-20 88.6
MS.gene064224.t1 MTR_5g088640 36.066 122 67 3 11 124 45 163 8.11e-20 86.7
MS.gene064224.t1 MTR_5g088080 36.364 121 66 3 12 124 46 163 8.91e-20 86.3
MS.gene064224.t1 MTR_5g088150 36.364 121 66 3 12 124 46 163 8.91e-20 86.3
MS.gene064224.t1 MTR_5g488210 36.364 121 66 3 12 124 46 163 8.91e-20 86.3
MS.gene064224.t1 MTR_4g029540 48.889 90 42 3 12 98 44 132 9.05e-20 86.7
MS.gene064224.t1 MTR_3g463400 47.059 68 36 0 14 81 166 233 2.16e-19 87.0
MS.gene064224.t1 MTR_5g488170 36.364 121 66 3 12 124 46 163 2.46e-19 84.7
MS.gene064224.t1 MTR_5g088610 37.615 109 60 2 11 111 42 150 3.25e-19 85.9
MS.gene064224.t1 MTR_3g077650 42.857 77 42 1 5 81 207 281 3.98e-19 86.3
MS.gene064224.t1 MTR_4g105660 39.326 89 54 0 14 102 213 301 4.85e-19 85.9
MS.gene064224.t1 MTR_7g037260 49.275 69 35 0 13 81 177 245 5.41e-19 85.5
MS.gene064224.t1 MTR_1g026870 39.604 101 59 1 5 105 111 209 6.82e-19 86.3
MS.gene064224.t1 MTR_7g061330 48.718 78 38 1 5 82 139 214 6.91e-19 85.9
MS.gene064224.t1 MTR_7g461410 48.718 78 38 1 5 82 139 214 6.91e-19 85.9
MS.gene064224.t1 MTR_6g027340 47.826 69 36 0 13 81 48 116 7.00e-19 82.4
MS.gene064224.t1 MTR_3g110028 47.436 78 39 1 5 82 111 186 8.55e-19 85.9
MS.gene064224.t1 MTR_7g061330 48.718 78 38 1 5 82 103 178 1.13e-18 85.5
MS.gene064224.t1 MTR_6g027360 48.529 68 35 0 14 81 111 178 1.59e-18 83.6
MS.gene064224.t1 MTR_5g082910 53.030 66 31 0 13 78 51 116 2.11e-18 82.8
MS.gene064224.t1 MTR_4g088015 39.326 89 51 1 14 102 254 339 4.98e-18 83.2
MS.gene064224.t1 MTR_7g086960 54.412 68 31 0 14 81 122 189 6.46e-18 82.4
MS.gene064224.t1 MTR_7g035350 34.848 132 63 5 14 128 258 383 7.35e-18 82.8
MS.gene064224.t1 MTR_6g027370 49.275 69 35 0 13 81 131 199 1.69e-17 81.3
MS.gene064224.t1 MTR_1g057980 36.842 114 63 3 13 122 112 220 2.35e-17 80.1
MS.gene064224.t1 MTR_3g089045 54.412 68 31 0 14 81 49 116 2.90e-17 79.7
MS.gene064224.t1 MTR_7g450950 42.105 76 41 1 13 85 189 264 3.57e-17 80.1
MS.gene064224.t1 MTR_5g007300 68.182 44 14 0 11 54 97 140 4.61e-15 70.5
MS.gene064224.t1 MTR_5g010650 50.000 62 31 0 14 75 143 204 5.54e-15 74.3
MS.gene064224.t1 MTR_7g037130 35.849 106 63 2 13 115 177 280 1.09e-14 73.2
MS.gene064224.t1 MTR_6g055910 47.143 70 25 1 36 105 2 59 6.64e-14 68.9
MS.gene064224.t1 MTR_7g061550 44.615 65 36 0 12 76 41 105 1.10e-13 70.1
MS.gene064224.t1 MTR_4g063100 58.696 46 19 0 36 81 1 46 1.64e-13 67.4
MS.gene064224.t1 MTR_1g085880 43.038 79 44 1 11 88 45 123 4.29e-13 66.6
MS.gene064224.t1 MTR_1g085770 43.038 79 44 1 11 88 45 123 6.54e-13 67.8
MS.gene064224.t1 MTR_2g096380 53.061 49 23 0 36 84 1 49 1.71e-12 64.3
MS.gene064224.t1 MTR_8g468380 41.379 87 49 1 3 89 46 130 2.99e-12 66.2
MS.gene064224.t1 MTR_5g038910 43.939 66 37 0 17 82 62 127 4.17e-12 65.9
MS.gene064224.t1 MTR_1g008970 38.889 90 55 0 13 102 123 212 5.45e-12 64.3
MS.gene064224.t1 MTR_5g038910 43.939 66 37 0 17 82 62 127 6.51e-12 65.1
MS.gene064224.t1 MTR_1g076150 36.975 119 61 3 51 168 33 138 2.55e-11 61.6
MS.gene064224.t1 MTR_2g088730 58.974 39 16 0 36 74 34 72 2.67e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064224.t1 AT3G23250 38.034 234 114 8 12 217 46 276 9.92e-38 134
MS.gene064224.t1 AT2G31180 47.853 163 68 4 11 173 45 190 2.41e-36 129
MS.gene064224.t1 AT5G14750 65.854 82 28 0 1 82 5 86 4.33e-36 126
MS.gene064224.t1 AT3G13540 41.420 169 82 4 11 167 56 219 1.92e-35 127
MS.gene064224.t1 AT5G14750 69.737 76 23 0 7 82 45 120 4.74e-35 125
MS.gene064224.t1 AT5G35550 63.333 90 28 1 7 96 46 130 8.12e-35 125
MS.gene064224.t1 AT1G06180 72.973 74 20 0 9 82 43 116 1.72e-34 124
MS.gene064224.t1 AT3G27920 68.493 73 23 0 11 83 47 119 5.72e-34 122
MS.gene064224.t1 AT4G38620 50.893 112 50 1 11 122 45 151 6.53e-34 124
MS.gene064224.t1 AT1G22640 40.764 157 81 4 11 164 45 192 7.00e-34 123
MS.gene064224.t1 AT5G35550 64.045 89 27 1 8 96 44 127 7.89e-34 123
MS.gene064224.t1 AT5G40330 68.421 76 24 0 7 82 41 116 1.01e-33 122
MS.gene064224.t1 AT1G79180 57.732 97 39 1 12 108 48 142 2.83e-33 122
MS.gene064224.t1 AT1G79180 57.732 97 39 1 12 108 81 175 4.05e-33 123
MS.gene064224.t1 AT1G16490 69.014 71 22 0 12 82 48 118 4.52e-33 121
MS.gene064224.t1 AT4G28110 68.056 72 23 0 12 83 46 117 8.41e-33 121
MS.gene064224.t1 AT5G12870 70.833 72 21 0 11 82 51 122 8.95e-33 121
MS.gene064224.t1 AT3G61250 67.105 76 25 0 8 83 42 117 1.59e-32 120
MS.gene064224.t1 AT5G16770 68.056 72 23 0 12 83 46 117 2.17e-32 121
MS.gene064224.t1 AT5G16770 68.056 72 23 0 12 83 46 117 2.17e-32 121
MS.gene064224.t1 AT2G16720 67.123 73 24 0 11 83 45 117 2.54e-32 119
MS.gene064224.t1 AT5G16770 68.056 72 23 0 12 83 46 117 3.06e-32 120
MS.gene064224.t1 AT5G16770 68.056 72 23 0 12 83 46 117 3.06e-32 120
MS.gene064224.t1 AT5G62320 40.000 150 75 2 9 158 51 185 3.98e-32 118
MS.gene064224.t1 AT1G74430 69.444 72 22 0 11 82 45 116 4.10e-32 119
MS.gene064224.t1 AT4G34990 49.580 119 45 2 11 129 45 148 4.76e-32 119
MS.gene064224.t1 AT3G02940 68.056 72 23 0 12 83 46 117 5.51e-32 119
MS.gene064224.t1 AT4G09460 52.000 100 43 2 11 105 45 144 6.12e-32 117
MS.gene064224.t1 AT3G02940 68.056 72 23 0 12 83 46 117 8.34e-32 119
MS.gene064224.t1 AT3G02940 68.056 72 23 0 12 83 46 117 8.34e-32 119
MS.gene064224.t1 AT5G54230 67.123 73 24 0 11 83 45 117 8.46e-32 119
MS.gene064224.t1 AT4G01680 69.444 72 22 0 11 82 45 116 8.72e-32 117
MS.gene064224.t1 AT3G01140 71.233 73 21 0 11 83 45 117 9.90e-32 119
MS.gene064224.t1 AT5G26660 69.014 71 22 0 12 82 15 85 1.18e-31 119
MS.gene064224.t1 AT1G35515 53.763 93 38 1 11 103 45 132 1.93e-31 115
MS.gene064224.t1 AT3G01140 71.233 73 21 0 11 83 88 160 2.24e-31 119
MS.gene064224.t1 AT4G01680 69.444 72 22 0 11 82 45 116 2.57e-31 118
MS.gene064224.t1 AT5G52600 73.239 71 19 0 11 81 45 115 2.69e-31 115
MS.gene064224.t1 AT4G01680 69.444 72 22 0 11 82 57 128 2.86e-31 118
MS.gene064224.t1 AT3G12820 67.143 70 23 0 14 83 2 71 2.88e-31 114
MS.gene064224.t1 AT5G65230 68.056 72 23 0 12 83 46 117 3.04e-31 117
MS.gene064224.t1 AT5G06100 66.197 71 24 0 11 81 65 135 3.15e-31 120
MS.gene064224.t1 AT5G16600 47.107 121 61 1 9 126 40 160 3.52e-31 118
MS.gene064224.t1 AT4G12350 64.000 75 27 0 9 83 43 117 3.73e-31 117
MS.gene064224.t1 AT4G05100 66.667 72 24 0 12 83 47 118 3.81e-31 117
MS.gene064224.t1 AT3G11440 64.789 71 25 0 11 81 74 144 4.10e-31 120
MS.gene064224.t1 AT5G10280 68.056 72 23 0 12 83 46 117 5.08e-31 117
MS.gene064224.t1 AT5G26660 66.216 74 25 0 9 82 43 116 5.36e-31 118
MS.gene064224.t1 AT3G12820 64.000 75 27 0 9 83 45 119 5.36e-31 115
MS.gene064224.t1 AT5G15310 68.493 73 23 0 11 83 45 117 6.08e-31 117
MS.gene064224.t1 AT5G06100 66.197 71 24 0 11 81 65 135 6.17e-31 120
MS.gene064224.t1 AT5G06100 66.197 71 24 0 11 81 65 135 6.17e-31 120
MS.gene064224.t1 AT5G06100 66.197 71 24 0 11 81 65 135 6.17e-31 120
MS.gene064224.t1 AT5G06100 66.197 71 24 0 11 81 65 135 6.17e-31 120
MS.gene064224.t1 AT5G15310 68.493 73 23 0 11 83 45 117 6.26e-31 117
MS.gene064224.t1 AT5G07700 64.474 76 27 0 12 87 46 121 6.72e-31 117
MS.gene064224.t1 AT5G07700 64.474 76 27 0 12 87 46 121 6.72e-31 117
MS.gene064224.t1 AT3G11440 64.789 71 25 0 11 81 74 144 6.96e-31 120
MS.gene064224.t1 AT3G11440 64.789 71 25 0 11 81 74 144 6.96e-31 120
MS.gene064224.t1 AT3G11440 64.789 71 25 0 11 81 74 144 6.96e-31 120
MS.gene064224.t1 AT3G27810 37.640 178 85 6 9 172 2 167 7.43e-31 113
MS.gene064224.t1 AT5G15310 67.568 74 24 0 11 84 45 118 7.49e-31 115
MS.gene064224.t1 AT3G49690 56.818 88 32 1 3 84 32 119 1.20e-30 116
MS.gene064224.t1 AT1G56160 66.216 74 25 0 9 82 45 118 1.27e-30 115
MS.gene064224.t1 AT3G08500 68.056 72 23 0 11 82 63 134 1.40e-30 116
MS.gene064224.t1 AT3G01530 51.456 103 47 1 7 106 54 156 1.53e-30 113
MS.gene064224.t1 AT1G57560 61.333 75 29 0 9 83 43 117 1.82e-30 115
MS.gene064224.t1 AT1G57560 61.333 75 29 0 9 83 43 117 1.84e-30 115
MS.gene064224.t1 AT4G21440 66.667 72 24 0 12 83 46 117 2.33e-30 116
MS.gene064224.t1 AT3G27810 37.778 180 86 6 7 172 49 216 2.56e-30 113
MS.gene064224.t1 AT4G22680 61.333 75 29 0 9 83 43 117 2.57e-30 114
MS.gene064224.t1 AT4G17785 61.644 73 28 0 11 83 46 118 2.60e-30 116
MS.gene064224.t1 AT3G13890 66.667 72 24 0 12 83 46 117 2.63e-30 116
MS.gene064224.t1 AT3G13890 65.753 73 25 0 11 83 54 126 2.76e-30 116
MS.gene064224.t1 AT4G17785 61.644 73 28 0 11 83 46 118 2.86e-30 116
MS.gene064224.t1 AT4G26930 65.217 69 24 0 12 80 53 121 2.97e-30 116
MS.gene064224.t1 AT1G09540 66.197 71 24 0 12 82 46 116 4.37e-30 115
MS.gene064224.t1 AT3G12720 61.111 72 28 0 12 83 56 127 7.64e-30 114
MS.gene064224.t1 AT5G55020 66.667 69 23 0 12 80 60 128 8.87e-30 117
MS.gene064224.t1 AT5G14340 60.256 78 31 0 5 82 51 128 1.12e-29 112
MS.gene064224.t1 AT5G56110 65.278 72 25 0 11 82 45 116 1.29e-29 113
MS.gene064224.t1 AT1G18710 63.014 73 27 0 10 82 44 116 1.30e-29 112
MS.gene064224.t1 AT5G57620 55.814 86 32 1 4 83 33 118 1.32e-29 114
MS.gene064224.t1 AT1G18570 67.123 73 24 0 11 83 46 118 1.44e-29 114
MS.gene064224.t1 AT5G07690 61.842 76 29 0 12 87 46 121 1.59e-29 114
MS.gene064224.t1 AT5G65790 54.545 88 34 1 3 84 32 119 1.63e-29 114
MS.gene064224.t1 AT5G61420 60.526 76 30 0 12 87 46 121 2.44e-29 114
MS.gene064224.t1 AT1G66230 63.889 72 26 0 11 82 45 116 2.70e-29 112
MS.gene064224.t1 AT2G36890 53.846 91 36 1 4 88 33 123 3.17e-29 112
MS.gene064224.t1 AT2G47460 62.500 72 27 0 11 82 45 116 3.27e-29 113
MS.gene064224.t1 AT2G32460 64.286 70 25 0 12 81 52 121 3.60e-29 115
MS.gene064224.t1 AT2G32460 64.286 70 25 0 12 81 40 109 3.90e-29 114
MS.gene064224.t1 AT5G60890 62.500 72 27 0 11 82 45 116 4.31e-29 111
MS.gene064224.t1 AT1G34670 65.278 72 25 0 12 83 46 117 4.80e-29 113
MS.gene064224.t1 AT3G62610 62.500 72 27 0 11 82 45 116 5.81e-29 112
MS.gene064224.t1 AT3G46130 55.422 83 37 0 6 88 5 87 6.88e-29 109
MS.gene064224.t1 AT2G36890 53.846 91 36 1 4 88 74 164 6.97e-29 112
MS.gene064224.t1 AT5G23000 56.977 86 31 2 4 83 33 118 7.10e-29 112
MS.gene064224.t1 AT1G63910 62.500 72 27 0 11 82 45 116 7.18e-29 112
MS.gene064224.t1 AT1G74650 65.278 72 25 0 12 83 46 117 7.37e-29 112
MS.gene064224.t1 AT5G49330 61.644 73 28 0 10 82 44 116 8.37e-29 112
MS.gene064224.t1 AT5G59780 56.098 82 36 0 7 88 37 118 8.95e-29 109
MS.gene064224.t1 AT5G40350 62.500 72 27 0 12 83 6 77 9.07e-29 107
MS.gene064224.t1 AT5G40350 59.740 77 31 0 7 83 46 122 1.29e-28 108
MS.gene064224.t1 AT4G37780 55.814 86 32 1 4 83 33 118 1.31e-28 110
MS.gene064224.t1 AT5G59780 55.814 86 37 1 4 88 12 97 1.41e-28 108
MS.gene064224.t1 AT3G46130 56.098 82 36 0 7 88 38 119 1.71e-28 109
MS.gene064224.t1 AT1G68320 61.842 76 29 0 7 82 48 123 1.71e-28 110
MS.gene064224.t1 AT3G24310 56.818 88 38 0 7 94 47 134 2.25e-28 109
MS.gene064224.t1 AT3G46130 58.442 77 32 0 12 88 21 97 2.65e-28 108
MS.gene064224.t1 AT3G23250 40.964 166 74 6 24 168 1 163 3.82e-28 107
MS.gene064224.t1 AT3G47600 63.380 71 26 0 12 82 40 110 3.91e-28 110
MS.gene064224.t1 AT1G74080 63.889 72 26 0 12 83 46 117 4.06e-28 110
MS.gene064224.t1 AT3G28470 69.231 65 20 0 12 76 46 110 4.30e-28 109
MS.gene064224.t1 AT3G47600 63.380 71 26 0 12 82 46 116 5.70e-28 109
MS.gene064224.t1 AT2G26960 57.317 82 33 1 11 90 53 134 5.92e-28 110
MS.gene064224.t1 AT4G13480 55.682 88 39 0 7 94 35 122 1.01e-27 107
MS.gene064224.t1 AT3G28910 62.500 72 27 0 11 82 45 116 1.21e-27 108
MS.gene064224.t1 AT1G25340 60.526 76 30 0 7 82 47 122 1.30e-27 107
MS.gene064224.t1 AT3G30210 45.217 115 53 1 7 121 56 160 1.55e-27 107
MS.gene064224.t1 AT5G62470 63.380 71 26 0 12 82 46 116 1.73e-27 108
MS.gene064224.t1 AT1G66370 48.039 102 44 1 11 103 41 142 4.69e-27 105
MS.gene064224.t1 AT5G62470 63.768 69 25 0 14 82 47 115 5.01e-27 107
MS.gene064224.t1 AT3G48920 61.972 71 27 0 12 82 52 122 8.80e-27 104
MS.gene064224.t1 AT2G47190 36.747 166 79 4 11 152 53 216 9.09e-27 105
MS.gene064224.t1 AT1G08810 63.380 71 26 0 12 82 46 116 9.78e-27 105
MS.gene064224.t1 AT5G52260 67.143 70 23 0 12 81 46 115 1.48e-26 104
MS.gene064224.t1 AT1G48000 60.563 71 28 0 10 80 64 134 2.58e-26 103
MS.gene064224.t1 AT1G25340 64.179 67 24 0 16 82 51 117 3.60e-26 103
MS.gene064224.t1 AT1G25340 64.179 67 24 0 16 82 51 117 7.28e-26 103
MS.gene064224.t1 AT4G25560 61.111 72 28 0 12 83 44 115 7.94e-26 102
MS.gene064224.t1 AT3G53200 44.444 108 59 1 11 117 9 116 2.73e-25 99.8
MS.gene064224.t1 AT5G14750 69.492 59 18 0 24 82 1 59 4.08e-25 97.4
MS.gene064224.t1 AT5G14750 69.492 59 18 0 24 82 1 59 4.08e-25 97.4
MS.gene064224.t1 AT3G53200 43.750 112 62 1 7 117 38 149 7.26e-25 99.4
MS.gene064224.t1 AT1G22640 36.806 144 79 4 24 164 1 135 1.70e-24 97.4
MS.gene064224.t1 AT5G49620 60.811 74 29 0 7 80 55 128 1.29e-23 97.4
MS.gene064224.t1 AT1G66380 56.522 92 33 1 9 100 6 90 1.32e-23 92.4
MS.gene064224.t1 AT3G06490 60.256 78 25 1 11 82 46 123 1.58e-23 97.4
MS.gene064224.t1 AT1G71030 56.716 67 29 0 17 83 5 71 7.31e-23 92.4
MS.gene064224.t1 AT1G71030 54.054 74 34 0 10 83 12 85 9.24e-23 92.8
MS.gene064224.t1 AT3G09230 56.338 71 31 0 14 84 88 158 1.56e-22 95.5
MS.gene064224.t1 AT1G66380 64.789 71 25 0 11 81 41 111 4.22e-22 89.4
MS.gene064224.t1 AT4G33450 53.425 73 34 0 14 86 52 124 1.76e-21 90.5
MS.gene064224.t1 AT1G17950 57.971 69 29 0 13 81 37 105 2.03e-21 90.5
MS.gene064224.t1 AT4G37260 52.857 70 33 0 13 82 45 114 2.77e-21 91.3
MS.gene064224.t1 AT1G69560 46.154 91 48 1 14 103 140 230 4.56e-21 90.9
MS.gene064224.t1 AT1G66390 63.380 71 26 0 11 81 41 111 5.04e-21 89.4
MS.gene064224.t1 AT1G69560 46.154 91 48 1 14 103 156 246 5.32e-21 90.9
MS.gene064224.t1 AT1G56650 61.972 71 27 0 11 81 41 111 5.65e-21 89.0
MS.gene064224.t1 AT1G26780 53.623 69 32 0 13 81 130 198 9.53e-21 90.5
MS.gene064224.t1 AT1G26780 53.623 69 32 0 13 81 130 198 9.67e-21 89.0
MS.gene064224.t1 AT2G25230 52.174 69 32 1 14 82 59 126 1.65e-20 87.4
MS.gene064224.t1 AT5G67300 52.857 70 33 0 13 82 38 107 1.90e-20 88.6
MS.gene064224.t1 AT3G27785 49.275 69 35 0 13 81 221 289 2.56e-20 89.7
MS.gene064224.t1 AT5G11510 53.623 69 32 0 14 82 114 182 2.83e-20 90.5
MS.gene064224.t1 AT5G11510 53.623 69 32 0 14 82 114 182 2.83e-20 90.5
MS.gene064224.t1 AT5G11510 53.623 69 32 0 14 82 114 182 2.83e-20 90.5
MS.gene064224.t1 AT3G60460 37.956 137 61 4 12 124 45 181 3.91e-20 87.8
MS.gene064224.t1 AT5G11510 53.623 69 32 0 14 82 114 182 4.01e-20 89.7
MS.gene064224.t1 AT5G11510 53.623 69 32 0 14 82 114 182 4.24e-20 89.7
MS.gene064224.t1 AT5G49620 51.136 88 29 1 7 80 55 142 4.66e-20 87.8
MS.gene064224.t1 AT2G23290 51.429 70 34 0 13 82 45 114 4.87e-20 87.8
MS.gene064224.t1 AT5G40360 49.254 67 34 0 14 80 191 257 6.62e-20 87.8
MS.gene064224.t1 AT2G39880 54.412 68 31 0 14 81 83 150 7.69e-20 87.8
MS.gene064224.t1 AT5G17800 41.000 100 50 1 12 111 124 214 9.35e-20 87.0
MS.gene064224.t1 AT3G55730 50.704 71 35 0 14 84 89 159 1.57e-19 87.4
MS.gene064224.t1 AT2G26950 54.237 59 27 0 18 76 56 114 2.14e-19 86.7
MS.gene064224.t1 AT3G50060 39.796 98 57 1 13 110 38 133 2.53e-19 85.5
MS.gene064224.t1 AT4G18770 47.059 68 36 0 14 81 250 317 3.12e-19 86.7
MS.gene064224.t1 AT1G73410 57.971 69 29 0 14 82 39 107 3.84e-19 84.0
MS.gene064224.t1 AT1G73410 57.971 69 29 0 13 81 38 106 7.33e-19 82.4
MS.gene064224.t1 AT5G02320 47.436 78 39 1 5 82 153 228 8.42e-19 85.9
MS.gene064224.t1 AT5G02320 47.436 78 39 1 5 82 153 228 8.42e-19 85.9
MS.gene064224.t1 AT5G02320 47.436 78 39 1 5 82 93 168 1.15e-18 85.1
MS.gene064224.t1 AT3G09370 51.471 68 33 0 14 81 168 235 1.26e-18 85.1
MS.gene064224.t1 AT3G09370 51.471 68 33 0 14 81 163 230 1.33e-18 85.1
MS.gene064224.t1 AT5G11050 27.650 217 127 6 14 212 138 342 1.50e-18 84.7
MS.gene064224.t1 AT3G09370 51.471 68 33 0 14 81 176 243 1.57e-18 85.1
MS.gene064224.t1 AT5G58850 44.118 68 38 0 14 81 138 205 2.14e-18 84.3
MS.gene064224.t1 AT4G32730 49.275 69 35 0 14 82 120 188 2.52e-18 84.7
MS.gene064224.t1 AT4G32730 49.275 69 35 0 14 82 120 188 2.52e-18 84.7
MS.gene064224.t1 AT4G32730 49.275 69 35 0 14 82 120 188 2.52e-18 84.7
MS.gene064224.t1 AT4G32730 49.275 69 35 0 14 82 120 188 2.52e-18 84.7
MS.gene064224.t1 AT3G29020 47.826 69 36 0 14 82 98 166 2.57e-18 81.6
MS.gene064224.t1 AT3G29020 47.826 69 36 0 14 82 100 168 2.78e-18 82.8
MS.gene064224.t1 AT4G32730 49.275 69 35 0 14 82 120 188 2.80e-18 84.3
MS.gene064224.t1 AT1G18960 46.250 80 37 2 12 87 41 118 2.49e-17 80.1
MS.gene064224.t1 AT5G40430 46.377 69 36 1 14 82 86 153 6.90e-17 78.2
MS.gene064224.t1 AT4G00540 47.826 69 36 0 14 82 139 207 7.23e-17 79.7
MS.gene064224.t1 AT4G00540 47.826 69 36 0 14 82 137 205 9.83e-17 79.3
MS.gene064224.t1 AT5G39700 52.857 70 32 1 14 83 89 157 9.35e-16 73.9
MS.gene064224.t1 AT2G37630 41.489 94 49 1 12 105 38 125 9.87e-16 76.3
MS.gene064224.t1 AT5G59780 52.830 53 25 0 36 88 1 53 2.23e-14 69.7
MS.gene064224.t1 AT3G46130 52.830 53 25 0 36 88 1 53 3.50e-14 69.3
MS.gene064224.t1 AT4G25560 62.791 43 16 0 39 81 5 47 1.11e-12 65.9
MS.gene064224.t1 AT1G14350 38.750 80 49 0 17 96 61 140 1.34e-12 67.4
MS.gene064224.t1 AT1G14350 38.750 80 49 0 17 96 61 140 1.34e-12 67.4
MS.gene064224.t1 AT2G02820 40.541 74 44 0 17 90 66 139 1.86e-12 67.0
MS.gene064224.t1 AT2G02820 40.541 74 44 0 17 90 66 139 2.01e-12 66.6
MS.gene064224.t1 AT2G02820 43.939 66 37 0 17 82 66 131 2.02e-12 67.0

Find 55 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACTACTTTGGATGATTT+TGG 0.124584 4.2:+55440845 MS.gene064224:CDS
GTGGATTTGGTTTCTTCATT+TGG 0.182912 4.2:-55440668 None:intergenic
CTATAGTATATGATGATATT+TGG 0.196587 4.2:+55441152 MS.gene064224:CDS
AATTCACTAGATGATGAAAA+TGG 0.245627 4.2:-55440797 None:intergenic
TTGAGGAGTAATTTGGTAAA+TGG 0.245669 4.2:-55440735 None:intergenic
GGCCCTTGGTGTCTGAGATT+TGG 0.262281 4.2:-55440766 None:intergenic
GATGATGAAAATGGGGATAA+AGG 0.281197 4.2:-55440788 None:intergenic
TGGATTTGGTTTCTTCATTT+GGG 0.298248 4.2:-55440667 None:intergenic
AACTGGATTGAGGAGTAATT+TGG 0.303507 4.2:-55440742 None:intergenic
ATCCATAACAAAACTTTCAT+TGG 0.308172 4.2:-55440993 None:intergenic
GCCCTTGGTGTCTGAGATTT+GGG 0.309174 4.2:-55440765 None:intergenic
TTTGTTATGGATAACGATTT+TGG 0.329855 4.2:+55441004 MS.gene064224:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4.2:-55440593 None:intergenic
TTAGGTGGCTGAATTATCTT+AGG 0.343554 4.2:+55440468 MS.gene064224:CDS
AAGATGTGGATGAAAACTTT+TGG 0.346585 4.2:+55440888 MS.gene064224:CDS
CTAGATATGGTTGCTGGAAT+TGG 0.347558 4.2:+55440273 None:intergenic
GGTGTCTGAGATTTGGGAAC+TGG 0.373391 4.2:-55440759 None:intergenic
ATTCACTAGATGATGAAAAT+GGG 0.403181 4.2:-55440796 None:intergenic
ATATCACAGTTCCACTACTT+TGG 0.405915 4.2:+55440835 MS.gene064224:CDS
ATGATGAAAATGGGGATAAA+GGG 0.417667 4.2:-55440787 None:intergenic
ACCATTGCGGCCGAGTTACC+TGG 0.444329 4.2:+55440575 MS.gene064224:CDS
ATGTCACTAGATATGGTTGC+TGG 0.454705 4.2:+55440267 None:intergenic
ACTTTCATTGGACGAATGAC+CGG 0.459504 4.2:-55440981 None:intergenic
TACCTGCAAACTTGGGAAGT+TGG 0.466120 4.2:-55440298 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4.2:-55440585 None:intergenic
GAGATTTGGGAACTGGATTG+AGG 0.491808 4.2:-55440752 None:intergenic
ATTGCTGACATCTTTGCCGT+TGG 0.498202 4.2:+55441114 MS.gene064224:CDS
TACTATTCCACTTGGTGTGT+TGG 0.498616 4.2:-55440924 None:intergenic
CTTTCATTGGACGAATGACC+GGG 0.500764 4.2:-55440980 None:intergenic
CTTAGGCCTAATATCAAAAG+AGG 0.501825 4.2:+55440485 MS.gene064224:CDS
GGATTCATTTATAAAAGATG+TGG 0.515547 4.2:+55440874 MS.gene064224:CDS
TGGGACATGTCATCCTCATA+TGG 0.519430 4.2:-55441079 None:intergenic
GATATATCTCTCCCTTGTGT+GGG 0.527770 4.2:-55440713 None:intergenic
GGATATATCTCTCCCTTGTG+TGG 0.530263 4.2:-55440714 None:intergenic
TCCAGGTAACTCGGCCGCAA+TGG 0.530910 4.2:-55440576 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.533782 4.2:+55440432 MS.gene064224:intron
ATTTCAGGTCTTTCAAGGTG+TGG 0.533848 4.2:+55440431 MS.gene064224:intron
CCCAAAATCATCCAAAGTAG+TGG 0.535258 4.2:-55440846 None:intergenic
ATAATGAAGTGAAGAACCAT+TGG 0.547695 4.2:+55440606 MS.gene064224:CDS
GTGGGAAGAGTTGTAGACTT+AGG 0.560267 4.2:+55440450 MS.gene064224:CDS
AAACTTTACTCAACAAGAAG+AGG 0.563987 4.2:+55440508 MS.gene064224:CDS
AAAGATGTCAGCAATTGTCT+TGG 0.567913 4.2:-55441106 None:intergenic
TCAGCAATTGTCTTGGAACG+TGG 0.572071 4.2:-55441099 None:intergenic
AAATGGGGATAAAGGGCCCT+TGG 0.573461 4.2:-55440780 None:intergenic
GATATTTCCAACACACCAAG+TGG 0.595510 4.2:+55440917 MS.gene064224:CDS
TCTTGAGAGAAGTATGCCAA+TGG 0.612444 4.2:-55440622 None:intergenic
TTCACTAGATGATGAAAATG+GGG 0.618182 4.2:-55440795 None:intergenic
GAAATTATTGAACCCACACA+AGG 0.622478 4.2:+55440701 MS.gene064224:CDS
CAGCAATTGTCTTGGAACGT+GGG 0.630429 4.2:-55441098 None:intergenic
TTCCCAAATCTCAGACACCA+AGG 0.638261 4.2:+55440763 MS.gene064224:CDS
GAATAGATGGTCGACCATTG+CGG 0.650619 4.2:+55440562 MS.gene064224:CDS
GGAACTGTGATATGAAGATG+TGG 0.659577 4.2:-55440825 None:intergenic
TCCCAAATCTCAGACACCAA+GGG 0.664108 4.2:+55440764 MS.gene064224:CDS
GGAAGAGTTGTAGACTTAGG+TGG 0.671039 4.2:+55440453 MS.gene064224:CDS
AAATTATTGAACCCACACAA+GGG 0.718502 4.2:+55440702 MS.gene064224:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCAATAATTTCTTTTGATT+TGG - chr4.2:55440693-55440712 None:intergenic 15.0%
!! CTATAGTATATGATGATATT+TGG + chr4.2:55441152-55441171 MS.gene064224:CDS 20.0%
!! GGTAATTAATATATAGAACT+TGG + chr4.2:55440317-55440336 MS.gene064224:intron 20.0%
!!! AATAATTTCTTTTGATTTGG+TGG - chr4.2:55440690-55440709 None:intergenic 20.0%
!!! ATTTCATTGTTTTTGATTTC+AGG + chr4.2:55440416-55440435 MS.gene064224:intron 20.0%
! AATTCACTAGATGATGAAAA+TGG - chr4.2:55440800-55440819 None:intergenic 25.0%
! ATATTAATTACCTGCAAACT+TGG - chr4.2:55440309-55440328 None:intergenic 25.0%
! ATCCATAACAAAACTTTCAT+TGG - chr4.2:55440996-55441015 None:intergenic 25.0%
! ATGATTCTTGTGAAAAATTG+TGG + chr4.2:55440368-55440387 MS.gene064224:intron 25.0%
! ATTCACTAGATGATGAAAAT+GGG - chr4.2:55440799-55440818 None:intergenic 25.0%
! GAAAAATATTCAGATTCCAA+CGG - chr4.2:55441133-55441152 None:intergenic 25.0%
! GGATTCATTTATAAAAGATG+TGG + chr4.2:55440874-55440893 MS.gene064224:CDS 25.0%
! TATTAATTACCTGCAAACTT+GGG - chr4.2:55440308-55440327 None:intergenic 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - chr4.2:55440494-55440513 None:intergenic 25.0%
!!! TTTGTTATGGATAACGATTT+TGG + chr4.2:55441004-55441023 MS.gene064224:CDS 25.0%
AAACTTTACTCAACAAGAAG+AGG + chr4.2:55440508-55440527 MS.gene064224:CDS 30.0%
AAATTATTGAACCCACACAA+GGG + chr4.2:55440702-55440721 MS.gene064224:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + chr4.2:55440549-55440568 MS.gene064224:CDS 30.0%
ATAATGAAGTGAAGAACCAT+TGG + chr4.2:55440606-55440625 MS.gene064224:CDS 30.0%
ATGATGAAAATGGGGATAAA+GGG - chr4.2:55440790-55440809 None:intergenic 30.0%
TTCACTAGATGATGAAAATG+GGG - chr4.2:55440798-55440817 None:intergenic 30.0%
TTGAGGAGTAATTTGGTAAA+TGG - chr4.2:55440738-55440757 None:intergenic 30.0%
! AAGATGTGGATGAAAACTTT+TGG + chr4.2:55440888-55440907 MS.gene064224:CDS 30.0%
! AAGCTTTTTAGATGCTTACA+AGG + chr4.2:55441027-55441046 MS.gene064224:CDS 30.0%
! TGGATTTGGTTTCTTCATTT+GGG - chr4.2:55440670-55440689 None:intergenic 30.0%
!! TTGTTTTGTACTATTCCACT+TGG - chr4.2:55440935-55440954 None:intergenic 30.0%
!!! GTCCAATGAAAGTTTTGTTA+TGG + chr4.2:55440991-55441010 MS.gene064224:CDS 30.0%
!!! TTCTTTTGATTTGGTGGATT+TGG - chr4.2:55440684-55440703 None:intergenic 30.0%
!!! TTTTGATTTCAGGTCTTTCA+AGG + chr4.2:55440426-55440445 MS.gene064224:intron 30.0%
AAAGATGTCAGCAATTGTCT+TGG - chr4.2:55441109-55441128 None:intergenic 35.0%
AACTGGATTGAGGAGTAATT+TGG - chr4.2:55440745-55440764 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - chr4.2:55440596-55440615 None:intergenic 35.0%
ATATCACAGTTCCACTACTT+TGG + chr4.2:55440835-55440854 MS.gene064224:CDS 35.0%
ATCCGAATGCATAAAAAGCT+TGG + chr4.2:55440539-55440558 MS.gene064224:CDS 35.0%
CTTAGGCCTAATATCAAAAG+AGG + chr4.2:55440485-55440504 MS.gene064224:CDS 35.0%
GAAATTATTGAACCCACACA+AGG + chr4.2:55440701-55440720 MS.gene064224:CDS 35.0%
GATGATGAAAATGGGGATAA+AGG - chr4.2:55440791-55440810 None:intergenic 35.0%
TCCGAATGCATAAAAAGCTT+GGG + chr4.2:55440540-55440559 MS.gene064224:CDS 35.0%
TTAGGTGGCTGAATTATCTT+AGG + chr4.2:55440468-55440487 MS.gene064224:CDS 35.0%
! CCACTACTTTGGATGATTTT+GGG + chr4.2:55440846-55440865 MS.gene064224:CDS 35.0%
! GTGGATTTGGTTTCTTCATT+TGG - chr4.2:55440671-55440690 None:intergenic 35.0%
! TCCACTACTTTGGATGATTT+TGG + chr4.2:55440845-55440864 MS.gene064224:CDS 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - chr4.2:55440544-55440563 None:intergenic 35.0%
! TTTTTGGACACAACCATATG+AGG + chr4.2:55441066-55441085 MS.gene064224:CDS 35.0%
!!! AGTCAGCAGTTGATAGTTTT+TGG + chr4.2:55441050-55441069 MS.gene064224:CDS 35.0%
!!! TTTGGATGATTTTGGGTTTC+TGG + chr4.2:55440853-55440872 MS.gene064224:CDS 35.0%
AAAGTCCAAGATCCAACTTC+AGG - chr4.2:55440344-55440363 None:intergenic 40.0%
ACTTTCATTGGACGAATGAC+CGG - chr4.2:55440984-55441003 None:intergenic 40.0%
ATAGAACTTGGACCTGAAGT+TGG + chr4.2:55440329-55440348 MS.gene064224:intron 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - chr4.2:55440588-55440607 None:intergenic 40.0%
CCCAAAATCATCCAAAGTAG+TGG - chr4.2:55440849-55440868 None:intergenic 40.0%
GATATATCTCTCCCTTGTGT+GGG - chr4.2:55440716-55440735 None:intergenic 40.0%
GATATTTCCAACACACCAAG+TGG + chr4.2:55440917-55440936 MS.gene064224:CDS 40.0%
GGAACTGTGATATGAAGATG+TGG - chr4.2:55440828-55440847 None:intergenic 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + chr4.2:55440431-55440450 MS.gene064224:intron 40.0%
! TCTTGAGAGAAGTATGCCAA+TGG - chr4.2:55440625-55440644 None:intergenic 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + chr4.2:55440432-55440451 MS.gene064224:intron 40.0%
!! TACTATTCCACTTGGTGTGT+TGG - chr4.2:55440927-55440946 None:intergenic 40.0%
!!! GATGCTTTTTTAGTGTCTCC+CGG + chr4.2:55440962-55440981 MS.gene064224:CDS 40.0%
ATTGCTGACATCTTTGCCGT+TGG + chr4.2:55441114-55441133 MS.gene064224:CDS 45.0%
CAGCAATTGTCTTGGAACGT+GGG - chr4.2:55441101-55441120 None:intergenic 45.0%
CTTTCATTGGACGAATGACC+GGG - chr4.2:55440983-55441002 None:intergenic 45.0%
GAATAGATGGTCGACCATTG+CGG + chr4.2:55440562-55440581 MS.gene064224:CDS 45.0%
GAGATTTGGGAACTGGATTG+AGG - chr4.2:55440755-55440774 None:intergenic 45.0%
GGAAGAGTTGTAGACTTAGG+TGG + chr4.2:55440453-55440472 MS.gene064224:CDS 45.0%
GGATATATCTCTCCCTTGTG+TGG - chr4.2:55440717-55440736 None:intergenic 45.0%
GTGGGAAGAGTTGTAGACTT+AGG + chr4.2:55440450-55440469 MS.gene064224:CDS 45.0%
TACCTGCAAACTTGGGAAGT+TGG - chr4.2:55440301-55440320 None:intergenic 45.0%
TCAGCAATTGTCTTGGAACG+TGG - chr4.2:55441102-55441121 None:intergenic 45.0%
TCCCAAATCTCAGACACCAA+GGG + chr4.2:55440764-55440783 MS.gene064224:CDS 45.0%
TGGGACATGTCATCCTCATA+TGG - chr4.2:55441082-55441101 None:intergenic 45.0%
TTCCCAAATCTCAGACACCA+AGG + chr4.2:55440763-55440782 MS.gene064224:CDS 45.0%
TTGGACCTGAAGTTGGATCT+TGG + chr4.2:55440336-55440355 MS.gene064224:intron 45.0%
AAATGGGGATAAAGGGCCCT+TGG - chr4.2:55440783-55440802 None:intergenic 50.0%
! GGTGTCTGAGATTTGGGAAC+TGG - chr4.2:55440762-55440781 None:intergenic 50.0%
!! GCCCTTGGTGTCTGAGATTT+GGG - chr4.2:55440768-55440787 None:intergenic 50.0%
CGCCAACTTCCCAAGTTTGC+AGG + chr4.2:55440296-55440315 MS.gene064224:intron 55.0%
!! GGCCCTTGGTGTCTGAGATT+TGG - chr4.2:55440769-55440788 None:intergenic 55.0%
ACCATTGCGGCCGAGTTACC+TGG + chr4.2:55440575-55440594 MS.gene064224:CDS 60.0%
TCCAGGTAACTCGGCCGCAA+TGG - chr4.2:55440579-55440598 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 55440279 55441180 55440279 ID=MS.gene064224
chr4.2 mRNA 55440279 55441180 55440279 ID=MS.gene064224.t1;Parent=MS.gene064224
chr4.2 exon 55440279 55440309 55440279 ID=MS.gene064224.t1.exon1;Parent=MS.gene064224.t1
chr4.2 CDS 55440279 55440309 55440279 ID=cds.MS.gene064224.t1;Parent=MS.gene064224.t1
chr4.2 exon 55440438 55441180 55440438 ID=MS.gene064224.t1.exon2;Parent=MS.gene064224.t1
chr4.2 CDS 55440438 55441180 55440438 ID=cds.MS.gene064224.t1;Parent=MS.gene064224.t1
Gene Sequence

>MS.gene064224

ATGGTTGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTAATTAATATATAGAACTTGGACCTGAAGTTGGATCTTGGACTTTGATGATGATTCTTGTGAAAAATTGTGGTCAAATAACATAAAATTTACTCACTATTTCATTGTTTTTGATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGACTTAGGTGGCTGAATTATCTTAGGCCTAATATCAAAAGAGGAAACTTTACTCAACAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCGACCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACCATTGGCATACTTCTCTCAAGAAGAGAGTTATAGATAACATAGTCCCAAATGAAGAAACCAAATCCACCAAATCAAAAGAAATTATTGAACCCACACAAGGGAGAGATATATCCATTTACCAAATTACTCCTCAATCCAGTTCCCAAATCTCAGACACCAAGGGCCCTTTATCCCCATTTTCATCATCTAGTGAATTCTCTTCCACATCTTCATATCACAGTTCCACTACTTTGGATGATTTTGGGTTTCTGGATTCATTTATAAAAGATGTGGATGAAAACTTTTGGCTTAATGATATTTCCAACACACCAAGTGGAATAGTACAAAACAATACTAATGATGCTTTTTTAGTGTCTCCCGGTCATTCGTCCAATGAAAGTTTTGTTATGGATAACGATTTTGGAAGCTTTTTAGATGCTTACAAGGAGTCAGCAGTTGATAGTTTTTGGACACAACCATATGAGGATGACATGTCCCACGTTCCAAGACAATTGCTGACATCTTTGCCGTTGGAATCTGAATATTTTTCTATAGTATATGATGATATTTGGAGTTGA
Protein sequence

>MS.gene064224.t1

MVAGIGANFPSLSRCGKSCRLRWLNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSTIAAELPGRTDNEVKNHWHTSLKKRVIDNIVPNEETKSTKSKEIIEPTQGRDISIYQITPQSSSQISDTKGPLSPFSSSSEFSSTSSYHSSTTLDDFGFLDSFIKDVDENFWLNDISNTPSGIVQNNTNDAFLVSPGHSSNESFVMDNDFGSFLDAYKESAVDSFWTQPYEDDMSHVPRQLLTSLPLESEYFSIVYDDIWS