AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064394

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064394.t1 MTR_3g053330 91.579 475 31 3 2 476 3 468 0.0 859
MS.gene064394.t1 MTR_2g023930 43.958 480 200 13 32 452 60 529 6.78e-97 303
MS.gene064394.t1 MTR_4g132430 39.130 460 198 12 34 441 30 459 2.17e-88 279
MS.gene064394.t1 MTR_2g088000 40.365 493 202 17 34 452 81 555 2.98e-88 281
MS.gene064394.t1 MTR_4g132430 49.117 283 113 5 187 441 46 325 1.43e-78 249
MS.gene064394.t1 MTR_7g110720 36.638 464 206 13 22 461 13 412 4.65e-68 224
MS.gene064394.t1 MTR_4g049760 40.816 343 175 8 87 409 100 434 1.13e-67 226
MS.gene064394.t1 MTR_7g110720 53.846 234 88 7 242 467 172 393 1.80e-65 216
MS.gene064394.t1 MTR_4g049790 38.308 402 203 13 93 461 131 520 7.84e-65 219
MS.gene064394.t1 MTR_4g047580 33.605 491 226 16 39 455 30 494 1.53e-61 210
MS.gene064394.t1 MTR_2g045360 46.983 232 112 5 233 456 185 413 7.89e-58 197
MS.gene064394.t1 MTR_7g009730 49.714 175 62 3 233 381 192 366 1.43e-44 165
MS.gene064394.t1 MTR_4g094412 40.840 262 115 7 243 467 218 476 1.03e-43 160
MS.gene064394.t1 MTR_4g094412 40.840 262 115 7 243 467 227 485 1.04e-43 160
MS.gene064394.t1 MTR_4g107970 70.930 86 25 0 234 319 153 238 1.45e-39 150
MS.gene064394.t1 MTR_4g107970 70.930 86 25 0 234 319 230 315 3.82e-39 150
MS.gene064394.t1 MTR_5g044695 60.465 86 33 1 203 287 20 105 1.43e-29 112
MS.gene064394.t1 MTR_4g007060 34.884 215 96 8 243 455 110 282 2.16e-28 114
MS.gene064394.t1 MTR_6g038890 39.521 167 88 4 131 286 51 215 2.56e-28 112
MS.gene064394.t1 MTR_4g007060 35.407 209 91 8 243 449 144 310 2.82e-28 114
MS.gene064394.t1 MTR_1g013790 47.368 95 48 1 243 335 83 177 1.57e-25 105
MS.gene064394.t1 MTR_3g106060 28.958 259 121 7 59 317 1 196 6.94e-25 104
MS.gene064394.t1 MTR_5g094430 52.564 78 36 1 242 319 235 311 8.12e-24 103
MS.gene064394.t1 MTR_5g094430 52.564 78 36 1 242 319 213 289 9.18e-24 103
MS.gene064394.t1 MTR_5g074400 47.191 89 46 1 231 319 392 479 1.04e-23 104
MS.gene064394.t1 MTR_5g074400 50.000 60 28 2 260 319 244 301 9.25e-12 67.8
MS.gene064394.t1 MTR_5g094430 52.564 78 36 1 242 319 347 423 1.83e-23 103
MS.gene064394.t1 MTR_3g056100 52.564 78 36 1 242 319 254 330 2.01e-23 102
MS.gene064394.t1 MTR_3g056100 52.564 78 36 1 242 319 241 317 2.01e-23 102
MS.gene064394.t1 MTR_3g056100 52.564 78 36 1 242 319 385 461 2.19e-23 103
MS.gene064394.t1 MTR_3g056100 52.564 78 36 1 242 319 398 474 2.30e-23 103
MS.gene064394.t1 MTR_5g097490 45.361 97 51 2 233 329 226 320 2.70e-23 101
MS.gene064394.t1 MTR_4g013260 52.564 78 36 1 242 319 319 395 4.52e-23 102
MS.gene064394.t1 MTR_4g013260 35.955 89 56 1 240 328 165 252 7.20e-13 70.9
MS.gene064394.t1 MTR_1g013760 44.444 108 59 1 244 351 125 231 5.29e-23 99.0
MS.gene064394.t1 MTR_7g011820 45.918 98 49 2 238 335 389 482 6.24e-23 102
MS.gene064394.t1 MTR_7g011820 53.333 60 26 2 260 319 229 286 4.70e-13 71.6
MS.gene064394.t1 MTR_3g031220 44.944 89 48 1 231 319 337 424 8.45e-23 101
MS.gene064394.t1 MTR_3g031220 48.333 60 29 2 260 319 199 256 1.19e-11 67.0
MS.gene064394.t1 MTR_2g105060 29.224 219 99 5 236 449 67 234 1.34e-22 97.1
MS.gene064394.t1 MTR_3g009470 52.564 78 36 1 242 319 478 554 1.59e-22 101
MS.gene064394.t1 MTR_3g009470 42.683 82 44 3 260 340 281 360 9.88e-14 73.9
MS.gene064394.t1 MTR_2g105060 29.224 219 99 5 236 449 142 309 3.03e-22 97.4
MS.gene064394.t1 MTR_7g071120 43.564 101 51 2 224 319 284 383 3.73e-22 99.4
MS.gene064394.t1 MTR_4g094588 43.956 91 50 1 246 336 165 254 4.38e-22 97.4
MS.gene064394.t1 MTR_5g042920 46.988 83 43 1 237 319 298 379 5.83e-22 98.6
MS.gene064394.t1 MTR_5g042920 47.222 72 36 2 260 331 152 221 3.48e-13 71.6
MS.gene064394.t1 MTR_2g033820 48.148 81 41 1 243 323 187 266 7.18e-22 97.4
MS.gene064394.t1 MTR_4g082580 47.561 82 42 1 238 319 257 337 1.58e-21 96.7
MS.gene064394.t1 MTR_4g082580 42.500 80 43 2 260 339 146 222 4.03e-11 65.1
MS.gene064394.t1 MTR_3g104750 43.182 88 49 1 229 316 74 160 2.75e-21 90.9
MS.gene064394.t1 MTR_5g091390 49.383 81 40 1 246 326 144 223 3.05e-21 94.4
MS.gene064394.t1 MTR_7g080020 48.718 78 39 1 242 319 476 552 5.42e-21 96.7
MS.gene064394.t1 MTR_7g080020 46.875 64 32 2 260 323 281 342 8.54e-12 68.2
MS.gene064394.t1 MTR_7g109800 42.857 98 51 2 243 340 129 221 5.61e-21 93.6
MS.gene064394.t1 MTR_7g079010 50.575 87 39 2 243 329 125 207 5.78e-21 91.7
MS.gene064394.t1 MTR_7g080000 48.718 78 39 1 242 319 415 491 8.61e-21 96.3
MS.gene064394.t1 MTR_7g080000 45.455 66 34 2 258 323 233 296 9.78e-12 67.8
MS.gene064394.t1 MTR_4g122530 46.341 82 43 1 243 324 192 272 2.15e-20 93.6
MS.gene064394.t1 MTR_1g086790 40.385 104 60 2 243 345 142 244 2.29e-20 92.4
MS.gene064394.t1 MTR_5g043880 46.914 81 42 1 236 316 101 180 3.36e-20 90.9
MS.gene064394.t1 MTR_7g028415 50.667 75 36 1 248 322 82 155 3.84e-20 87.8
MS.gene064394.t1 MTR_7g028710 50.667 75 36 1 248 322 82 155 3.84e-20 87.8
MS.gene064394.t1 MTR_8g096730 42.857 84 47 1 242 325 53 135 6.77e-20 86.7
MS.gene064394.t1 MTR_1g015140 49.315 73 36 1 244 316 87 158 6.99e-20 87.0
MS.gene064394.t1 MTR_7g100510 46.988 83 43 1 237 319 339 420 9.74e-20 91.7
MS.gene064394.t1 MTR_7g100510 44.000 75 40 2 260 334 190 262 8.49e-13 70.5
MS.gene064394.t1 MTR_2g083870 52.857 70 33 0 250 319 71 140 6.33e-19 86.7
MS.gene064394.t1 MTR_3g095040 50.000 74 36 1 246 319 105 177 6.73e-19 85.5
MS.gene064394.t1 MTR_2g016770 58.065 62 26 0 259 320 35 96 8.16e-19 85.5
MS.gene064394.t1 MTR_8g087000 46.739 92 42 2 250 340 66 151 8.96e-19 85.9
MS.gene064394.t1 MTR_8g087000 53.521 71 32 1 250 319 67 137 9.40e-19 85.9
MS.gene064394.t1 MTR_7g109600 42.857 98 47 2 241 332 29 123 9.56e-19 86.3
MS.gene064394.t1 MTR_2g024350 41.975 81 47 0 254 334 3 83 1.07e-18 85.5
MS.gene064394.t1 MTR_2g016770 58.065 62 26 0 259 320 27 88 1.13e-18 84.7
MS.gene064394.t1 MTR_8g092010 44.156 77 42 1 246 322 95 170 1.49e-18 84.0
MS.gene064394.t1 MTR_1g070455 53.731 67 31 0 260 326 294 360 1.55e-18 87.4
MS.gene064394.t1 MTR_8g007270 46.053 76 40 1 242 317 137 211 2.56e-18 84.3
MS.gene064394.t1 MTR_4g130900 48.052 77 39 1 243 319 343 418 2.85e-18 87.8
MS.gene064394.t1 MTR_2g032030 40.000 110 65 1 226 334 233 342 2.90e-18 87.8
MS.gene064394.t1 MTR_4g094908 57.627 59 25 0 260 318 267 325 3.55e-18 85.9
MS.gene064394.t1 MTR_2g032030 40.000 110 65 1 226 334 233 342 4.78e-18 86.7
MS.gene064394.t1 MTR_3g095080 44.737 76 41 1 242 317 151 225 5.80e-18 83.6
MS.gene064394.t1 MTR_3g095080 44.737 76 41 1 242 317 127 201 6.63e-18 82.8
MS.gene064394.t1 MTR_5g016610 48.649 74 38 0 245 318 185 258 7.21e-18 84.0
MS.gene064394.t1 MTR_2g024380 43.210 81 46 0 254 334 246 326 1.08e-17 85.9
MS.gene064394.t1 MTR_1g009613 42.105 76 44 0 243 318 246 321 3.03e-17 83.2
MS.gene064394.t1 MTR_4g127040 46.250 80 42 1 239 317 224 303 4.33e-17 82.4
MS.gene064394.t1 MTR_1g099600 41.489 94 53 1 256 349 182 273 6.88e-17 81.6
MS.gene064394.t1 MTR_1g077780 39.130 92 54 2 243 334 46 135 1.90e-16 76.6
MS.gene064394.t1 MTR_8g092140 44.156 77 41 2 242 317 142 217 2.67e-16 78.6
MS.gene064394.t1 MTR_0117s0040 39.785 93 50 1 246 338 61 147 3.25e-16 78.6
MS.gene064394.t1 MTR_8g028565 45.946 74 40 0 256 329 152 225 4.08e-16 79.7
MS.gene064394.t1 MTR_6g086555 46.512 86 43 3 240 323 186 270 1.20e-15 79.3
MS.gene064394.t1 MTR_3g108960 43.243 74 42 0 243 316 298 371 1.79e-15 78.6
MS.gene064394.t1 MTR_7g079040 39.362 94 50 1 256 349 151 237 2.26e-15 77.4
MS.gene064394.t1 MTR_8g098945 43.056 72 41 0 258 329 128 199 6.91e-15 75.1
MS.gene064394.t1 MTR_7g062220 54.098 61 27 1 260 320 125 184 1.37e-14 75.1
MS.gene064394.t1 MTR_3g009470 42.683 82 44 3 260 340 281 360 5.40e-14 74.7
MS.gene064394.t1 MTR_4g007060 51.786 56 25 2 243 296 144 199 2.89e-13 69.7
MS.gene064394.t1 MTR_1g078260 42.466 73 40 2 246 317 234 305 3.50e-13 72.0
MS.gene064394.t1 MTR_8g069935 32.653 98 54 1 243 328 303 400 1.33e-12 70.1
MS.gene064394.t1 MTR_3g031220 48.333 60 29 2 260 319 199 256 5.81e-12 67.8
MS.gene064394.t1 MTR_8g027860 45.205 73 33 2 258 323 135 207 9.01e-12 66.6
MS.gene064394.t1 MTR_5g067680 50.877 57 26 1 260 314 203 259 1.02e-11 66.6
MS.gene064394.t1 MTR_8g067650 28.289 152 100 3 171 319 254 399 1.18e-11 67.4
MS.gene064394.t1 MTR_7g073430 43.210 81 44 1 260 338 123 203 1.25e-11 65.5
MS.gene064394.t1 MTR_6g053200 37.349 83 49 2 240 319 308 390 2.55e-11 66.2
MS.gene064394.t1 MTR_5g097500 34.783 92 57 3 249 339 220 309 2.79e-11 65.1
MS.gene064394.t1 MTR_7g073380 36.364 99 60 2 243 338 106 204 3.81e-11 64.3
MS.gene064394.t1 MTR_8g099350 47.059 68 29 2 260 320 133 200 5.88e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064394.t1 AT4G04450 40.825 485 217 18 33 452 24 503 1.60e-90 285
MS.gene064394.t1 AT4G04450 43.921 403 184 11 87 452 12 409 3.91e-89 279
MS.gene064394.t1 AT1G62300 39.916 476 228 12 34 462 84 548 5.29e-89 282
MS.gene064394.t1 AT4G22070 42.118 406 181 12 26 381 19 420 1.23e-74 244
MS.gene064394.t1 AT4G22070 42.118 406 181 12 26 381 19 420 1.23e-74 244
MS.gene064394.t1 AT4G22070 42.118 406 181 12 26 381 19 420 1.23e-74 244
MS.gene064394.t1 AT4G22070 42.118 406 181 12 26 381 19 420 1.23e-74 244
MS.gene064394.t1 AT4G01720 48.594 249 107 5 221 449 196 443 9.15e-53 185
MS.gene064394.t1 AT1G68150 40.467 257 123 8 100 355 100 327 2.61e-45 162
MS.gene064394.t1 AT5G15130 31.197 468 227 15 93 473 35 494 9.97e-44 162
MS.gene064394.t1 AT5G15130 41.473 258 106 7 242 455 168 424 2.31e-43 160
MS.gene064394.t1 AT1G18860 58.000 150 55 3 239 381 219 367 8.81e-41 153
MS.gene064394.t1 AT1G69810 33.548 310 186 7 86 381 18 321 6.51e-36 137
MS.gene064394.t1 AT1G69810 49.333 150 70 3 233 381 119 263 4.01e-34 131
MS.gene064394.t1 AT1G80840 25.879 398 184 12 56 449 1 291 6.63e-27 110
MS.gene064394.t1 AT4G31800 32.377 244 118 7 100 337 52 254 1.64e-26 109
MS.gene064394.t1 AT1G13960 43.220 118 56 2 202 319 362 468 1.08e-24 107
MS.gene064394.t1 AT1G13960 53.333 60 26 2 260 319 230 287 4.18e-13 71.6
MS.gene064394.t1 AT1G13960 43.220 118 56 2 202 319 209 315 1.17e-24 105
MS.gene064394.t1 AT1G13960 53.333 60 26 2 260 319 77 134 6.78e-13 70.5
MS.gene064394.t1 AT4G31800 48.485 99 46 2 244 337 91 189 1.36e-24 102
MS.gene064394.t1 AT2G38470 38.636 132 66 4 242 373 345 461 4.64e-24 105
MS.gene064394.t1 AT2G38470 45.205 73 37 3 247 319 173 242 8.87e-12 67.8
MS.gene064394.t1 AT1G29860 38.971 136 72 4 243 368 120 254 8.03e-24 101
MS.gene064394.t1 AT5G07100 45.361 97 47 2 239 330 121 216 3.39e-23 97.8
MS.gene064394.t1 AT5G07100 45.361 97 47 2 239 330 121 216 3.39e-23 97.8
MS.gene064394.t1 AT5G07100 45.361 97 47 2 239 330 121 216 3.39e-23 97.8
MS.gene064394.t1 AT5G07100 45.361 97 47 2 239 330 121 216 3.39e-23 97.8
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 188 264 4.25e-23 101
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 188 264 4.25e-23 101
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 188 264 4.25e-23 101
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 188 264 4.25e-23 101
MS.gene064394.t1 AT5G07100 45.361 97 47 2 239 330 214 309 5.52e-23 99.8
MS.gene064394.t1 AT5G07100 30.070 143 79 4 190 332 68 189 5.10e-11 64.3
MS.gene064394.t1 AT5G46350 42.969 128 61 4 232 349 147 272 7.15e-23 99.8
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 324 400 7.70e-23 101
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 292 368 8.45e-23 101
MS.gene064394.t1 AT2G25000 57.971 69 28 1 252 319 95 163 9.54e-23 97.1
MS.gene064394.t1 AT2G25000 57.971 69 28 1 252 319 95 163 9.54e-23 97.1
MS.gene064394.t1 AT4G26640 51.282 78 37 1 242 319 364 440 1.10e-22 101
MS.gene064394.t1 AT2G25000 57.971 69 28 1 252 319 117 185 1.48e-22 97.1
MS.gene064394.t1 AT2G25000 57.971 69 28 1 252 319 138 206 1.73e-22 97.4
MS.gene064394.t1 AT2G03340 50.602 83 40 1 237 319 393 474 2.04e-22 100
MS.gene064394.t1 AT2G03340 56.667 60 24 2 260 319 251 308 1.96e-14 75.9
MS.gene064394.t1 AT5G26170 50.685 73 35 1 245 317 99 170 3.65e-22 93.6
MS.gene064394.t1 AT3G01970 43.925 107 46 2 225 318 18 123 4.52e-22 92.8
MS.gene064394.t1 AT5G41570 52.941 85 36 2 243 327 82 162 4.68e-22 93.6
MS.gene064394.t1 AT2G47260 45.545 101 50 2 243 339 158 257 5.32e-22 97.4
MS.gene064394.t1 AT5G56270 49.398 83 41 1 237 319 465 546 6.21e-22 99.8
MS.gene064394.t1 AT5G56270 49.180 61 29 2 260 320 274 332 9.09e-12 67.8
MS.gene064394.t1 AT4G18170 51.948 77 36 1 243 319 156 231 9.11e-22 96.3
MS.gene064394.t1 AT2G04880 48.684 76 38 1 245 320 269 343 1.25e-21 97.8
MS.gene064394.t1 AT2G04880 47.619 63 31 2 257 319 109 169 1.90e-11 66.6
MS.gene064394.t1 AT2G04880 48.684 76 38 1 245 320 293 367 1.50e-21 97.8
MS.gene064394.t1 AT2G04880 47.619 63 31 2 257 319 109 169 2.38e-11 66.2
MS.gene064394.t1 AT2G46130 43.878 98 51 2 232 329 3 96 1.62e-21 89.7
MS.gene064394.t1 AT5G49520 44.944 89 48 1 243 331 205 292 1.65e-21 96.7
MS.gene064394.t1 AT1G64000 55.000 80 32 2 246 325 101 176 1.95e-21 92.4
MS.gene064394.t1 AT2G30250 51.282 78 37 1 242 319 311 387 3.94e-21 95.5
MS.gene064394.t1 AT3G01080 48.718 78 39 1 242 319 327 403 4.41e-21 96.3
MS.gene064394.t1 AT3G01080 50.000 60 28 2 260 319 206 263 2.11e-11 66.2
MS.gene064394.t1 AT3G01080 48.718 78 39 1 242 319 289 365 4.65e-21 95.5
MS.gene064394.t1 AT3G01080 50.000 60 28 2 260 319 168 225 2.22e-11 66.2
MS.gene064394.t1 AT1G69310 44.444 81 44 1 236 316 124 203 4.40e-20 90.9
MS.gene064394.t1 AT1G69310 44.444 81 44 1 236 316 124 203 4.40e-20 90.9
MS.gene064394.t1 AT1G69310 44.444 81 44 1 236 316 124 203 4.40e-20 90.9
MS.gene064394.t1 AT5G13080 53.425 73 33 1 246 318 54 125 7.98e-20 86.3
MS.gene064394.t1 AT3G62340 53.247 77 35 1 243 319 102 177 2.55e-19 88.2
MS.gene064394.t1 AT4G30935 49.351 77 38 1 243 319 315 390 4.55e-19 90.1
MS.gene064394.t1 AT1G55600 47.436 78 40 1 243 320 291 367 7.96e-19 89.4
MS.gene064394.t1 AT1G29280 38.053 113 55 1 225 322 25 137 8.95e-19 86.3
MS.gene064394.t1 AT4G26440 40.594 101 57 2 243 343 356 453 1.14e-18 89.4
MS.gene064394.t1 AT2G23320 57.627 59 25 0 260 318 241 299 1.23e-18 87.0
MS.gene064394.t1 AT5G28650 44.565 92 45 2 232 317 229 320 2.73e-18 86.3
MS.gene064394.t1 AT2G30590 45.122 82 41 1 244 321 294 375 3.41e-18 86.7
MS.gene064394.t1 AT2G44745 45.333 75 40 1 242 316 128 201 4.12e-18 83.6
MS.gene064394.t1 AT4G23550 44.444 81 45 0 254 334 135 215 7.71e-18 84.7
MS.gene064394.t1 AT4G39410 44.737 76 41 1 242 317 206 280 9.19e-18 84.3
MS.gene064394.t1 AT4G24240 46.914 81 42 1 239 318 260 340 1.01e-17 84.7
MS.gene064394.t1 AT5G64810 46.479 71 37 1 246 316 97 166 1.01e-17 81.6
MS.gene064394.t1 AT2G34830 41.748 103 59 1 225 326 180 282 1.14e-17 85.5
MS.gene064394.t1 AT2G37260 42.105 95 45 3 234 325 248 335 1.16e-17 84.7
MS.gene064394.t1 AT2G37260 46.667 75 36 3 260 332 84 156 2.10e-14 74.7
MS.gene064394.t1 AT2G37260 42.105 95 45 3 234 325 250 337 1.29e-17 84.7
MS.gene064394.t1 AT2G37260 46.667 75 36 3 260 332 86 158 2.19e-14 74.7
MS.gene064394.t1 AT2G34830 41.748 103 59 1 225 326 189 291 1.43e-17 85.1
MS.gene064394.t1 AT1G30650 41.748 103 59 1 225 326 182 284 1.52e-17 85.1
MS.gene064394.t1 AT3G04670 46.914 81 37 2 243 317 240 320 1.54e-17 84.0
MS.gene064394.t1 AT4G01250 39.048 105 51 1 259 350 128 232 1.67e-17 83.6
MS.gene064394.t1 AT2G37260 42.105 95 45 3 234 325 330 417 2.00e-17 84.7
MS.gene064394.t1 AT2G37260 46.667 75 36 3 260 332 166 238 3.18e-14 75.1
MS.gene064394.t1 AT3G58710 51.429 70 34 0 250 319 61 130 2.69e-17 82.4
MS.gene064394.t1 AT3G58710 51.429 70 34 0 250 319 62 131 2.81e-17 82.4
MS.gene064394.t1 AT4G31550 43.421 76 43 0 241 316 228 303 1.33e-16 81.3
MS.gene064394.t1 AT4G31550 43.421 76 43 0 241 316 227 302 1.40e-16 81.3
MS.gene064394.t1 AT2G46130 40.816 98 50 3 232 329 3 92 1.40e-16 75.9
MS.gene064394.t1 AT2G24570 43.421 76 43 0 241 316 225 300 2.21e-16 80.5
MS.gene064394.t1 AT5G52830 44.156 77 43 0 253 329 159 235 3.53e-16 80.1
MS.gene064394.t1 AT1G69310 40.741 81 43 2 236 316 124 199 4.06e-15 76.3
MS.gene064394.t1 AT4G31800 30.049 203 95 7 100 296 52 213 1.25e-14 73.9
MS.gene064394.t1 AT5G45260 43.434 99 49 3 238 334 1192 1285 4.13e-14 75.9
MS.gene064394.t1 AT5G45050 43.678 87 38 1 259 334 1180 1266 7.10e-14 75.1
MS.gene064394.t1 AT5G45050 43.678 87 38 1 259 334 1152 1238 7.51e-14 74.7
MS.gene064394.t1 AT5G45050 43.678 87 38 1 259 334 1041 1127 7.53e-14 74.7
MS.gene064394.t1 AT5G43290 40.244 82 47 2 240 320 94 174 9.58e-14 72.0
MS.gene064394.t1 AT2G21900 43.548 62 34 1 258 319 108 168 3.88e-13 68.6
MS.gene064394.t1 AT2G46400 43.210 81 44 1 236 314 81 161 1.75e-12 68.6
MS.gene064394.t1 AT3G01080 50.000 60 28 2 260 319 206 263 1.21e-11 66.2
MS.gene064394.t1 AT2G40740 42.500 80 42 2 260 335 174 253 5.12e-11 63.9
MS.gene064394.t1 AT2G40740 42.500 80 42 2 260 335 183 262 6.40e-11 63.9

Find 76 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGCTTTATTGCAATTC+TGG 0.180524 3.3:+43925619 None:intergenic
AAGAATTCAGCCTTGGAATT+TGG 0.219629 3.3:+43927567 None:intergenic
GCTGCATAATATGCTCTTCT+AGG 0.248057 3.3:+43928116 None:intergenic
GCAGCATCAATGCTACTTTC+AGG 0.315857 3.3:-43926035 MS.gene064394:CDS
GGATGTCAATGGAGAAAATA+TGG 0.325975 3.3:-43926911 MS.gene064394:CDS
GATCCACTTTCTAATATTGT+TGG 0.346118 3.3:+43925981 None:intergenic
TCACCTCCTTCAACCAATCT+TGG 0.349365 3.3:-43925835 MS.gene064394:CDS
AGCAAGATCAGAAACTAATA+TGG 0.381760 3.3:-43927483 MS.gene064394:intron
GCTCCATTTGGTGTAGGGTT+AGG 0.385260 3.3:+43929170 None:intergenic
TTGGTAGTACCATTATTGTT+TGG 0.387147 3.3:+43925657 None:intergenic
CCTTGAAATGCTTTATTAGC+TGG 0.391672 3.3:+43927602 None:intergenic
TGTAGGGTTAGGTCATTAAC+TGG 0.394243 3.3:+43929181 None:intergenic
GTATATACTTGCTTCCGAAC+TGG 0.394378 3.3:+43926821 None:intergenic
ACTTTCAATGATGGAAGTTA+TGG 0.396495 3.3:+43925689 None:intergenic
AATTCAAATCCAAACAATAA+TGG 0.398112 3.3:-43925666 MS.gene064394:CDS
ATAAATTTCTGAGCCAAGAT+TGG 0.398326 3.3:+43925822 None:intergenic
AAACCATCTGCACTTGTCAT+TGG 0.402705 3.3:+43926011 None:intergenic
TGCTGAAGATAGAAGTGTTT+TGG 0.402931 3.3:-43926132 MS.gene064394:CDS
TTTGTTGCTAGGAGAAATCT+TGG 0.415907 3.3:+43929013 None:intergenic
CCCATGTTCAAGAATGGCCT+TGG 0.418842 3.3:+43927767 None:intergenic
TCCAAGGCTGAATTCTTTCA+AGG 0.422017 3.3:-43927561 MS.gene064394:CDS
ACTAGAGCAGAAGTGAATTT+CGG 0.430200 3.3:+43925717 None:intergenic
CCAGCTAATAAAGCATTTCA+AGG 0.433719 3.3:-43927602 MS.gene064394:CDS
ATTTGAATTACTTTCAATGA+TGG 0.439445 3.3:+43925680 None:intergenic
GATTTCTCCTAGCAACAAAC+TGG 0.442717 3.3:-43929009 MS.gene064394:CDS
GTTTGAGAGAGCTAATTGAT+AGG 0.446725 3.3:-43928159 MS.gene064394:CDS
CTATCATCCAGTTTGTTGCT+AGG 0.450663 3.3:+43929002 None:intergenic
GTCATTTGCAATGATACTAT+AGG 0.455756 3.3:-43929319 MS.gene064394:CDS
TGACCTAACCCTACACCAAA+TGG 0.459298 3.3:-43929173 MS.gene064394:CDS
GCTTATTATCGTTGCACAAT+GGG 0.468330 3.3:-43926854 MS.gene064394:CDS
TCCAAGGCCATTCTTGAACA+TGG 0.473443 3.3:-43927768 MS.gene064394:CDS
GCAAAACCCATGTTCAAGAA+TGG 0.479173 3.3:+43927761 None:intergenic
CCAAGGCTGAATTCTTTCAA+GGG 0.480719 3.3:-43927560 MS.gene064394:CDS
TCTAGTGTGATAGTTGGAAA+TGG 0.482456 3.3:+43925915 None:intergenic
CTGGTCTCCACTTGTACCAT+TGG 0.482489 3.3:+43925638 None:intergenic
CTACGTGATGATGCTCCATT+TGG 0.485074 3.3:+43929158 None:intergenic
CCAAGGCCATTCTTGAACAT+GGG 0.488187 3.3:-43927767 MS.gene064394:CDS
CCCTTGAAAGAATTCAGCCT+TGG 0.496679 3.3:+43927560 None:intergenic
TCTGAGCCAAGATTGGTTGA+AGG 0.497109 3.3:+43925829 None:intergenic
GTGCAACGATAATAAGCTCT+TGG 0.499916 3.3:+43926860 None:intergenic
GAGAAAATATGGACAGAAGA+TGG 0.503010 3.3:-43926900 MS.gene064394:CDS
TATGGACAGAAGATGGCAAA+GGG 0.509004 3.3:-43926893 MS.gene064394:CDS
TGGGCACTGCTTGTCCAGTT+CGG 0.509323 3.3:-43926835 MS.gene064394:CDS
CGATAATAAGCTCTTGGACA+TGG 0.509444 3.3:+43926866 None:intergenic
AATCCAACAATATTAGAAAG+TGG 0.511191 3.3:-43925984 MS.gene064394:CDS
AACAATAATGGTACTACCAA+TGG 0.512435 3.3:-43925654 MS.gene064394:CDS
GTGAGATCTAGTGTGATAGT+TGG 0.515834 3.3:+43925909 None:intergenic
TTATGCAGCTGAAGCAGAAA+CGG 0.537748 3.3:-43928102 MS.gene064394:CDS
GATGATGCTCCATTTGGTGT+AGG 0.540710 3.3:+43929164 None:intergenic
TTGCTGTTGGTGGTAGAGCA+TGG 0.541988 3.3:+43926084 None:intergenic
ATGATGCTCCATTTGGTGTA+GGG 0.544067 3.3:+43929165 None:intergenic
AGATTTCAGATGGATGTCAA+TGG 0.544482 3.3:-43926922 MS.gene064394:CDS
GGCTTTCAAACCAAATTCCA+AGG 0.544959 3.3:-43927577 MS.gene064394:CDS
AATGTATCACAGATTTCAGA+TGG 0.548456 3.3:-43926932 MS.gene064394:intron
AGCTTATTATCGTTGCACAA+TGG 0.549784 3.3:-43926855 MS.gene064394:CDS
TATACAAGAGAAAACTGAAA+GGG 0.553286 3.3:-43927648 MS.gene064394:CDS
CTGCATAATATGCTCTTCTA+GGG 0.557538 3.3:+43928117 None:intergenic
ATGGTATGAATATGATTCCA+AGG 0.557677 3.3:-43927784 MS.gene064394:CDS
GGACCAATGACAAGTGCAGA+TGG 0.572451 3.3:-43926014 MS.gene064394:CDS
GAAGCAACTGAAGAAAAGAA+TGG 0.574998 3.3:-43927803 MS.gene064394:CDS
CTAATAAAGCATTTCAAGGG+TGG 0.575072 3.3:-43927598 MS.gene064394:CDS
GGTACTACCAATGGTACAAG+TGG 0.580829 3.3:-43925645 MS.gene064394:CDS
TGATGCAAGGAACGAAAATG+AGG 0.583927 3.3:-43928970 MS.gene064394:intron
CTTGGCTCAGAAATTTATGT+CGG 0.584406 3.3:-43925817 MS.gene064394:CDS
ATAGAGAATATTCTGATGCA+AGG 0.587268 3.3:-43928983 MS.gene064394:CDS
GAGCCAAGATTGGTTGAAGG+AGG 0.613229 3.3:+43925832 None:intergenic
CAGCTAATAAAGCATTTCAA+GGG 0.630313 3.3:-43927601 MS.gene064394:CDS
TTATACAAGAGAAAACTGAA+AGG 0.640687 3.3:-43927649 MS.gene064394:CDS
ACCACCAACAGCAAAAGCAA+TGG 0.641019 3.3:-43926075 MS.gene064394:CDS
GTTGCCATGGTATGTGAACA+AGG 0.642115 3.3:+43925954 None:intergenic
ATATGGACAGAAGATGGCAA+AGG 0.645418 3.3:-43926894 MS.gene064394:CDS
ACTCCCTTGTTCACATACCA+TGG 0.652335 3.3:-43925958 MS.gene064394:CDS
GCAGAAACGGAGTAAACTTG+AGG 0.652579 3.3:-43928089 MS.gene064394:intron
TGAAGCTGAGAGTGTTGCCA+TGG 0.661880 3.3:+43925941 None:intergenic
ATGGACAGAAGATGGCAAAG+GGG 0.709928 3.3:-43926892 MS.gene064394:CDS
TTGCCATGGTATGTGAACAA+GGG 0.750098 3.3:+43925955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAATTGCAAAA+TGG + chr3.3:43925848-43925867 None:intergenic 10.0%
!! TATGCTTATTTATTAAATAT+AGG - chr3.3:43928783-43928802 MS.gene064394:intron 10.0%
!! AAGTTGTAAAAAGATTATTA+AGG + chr3.3:43928561-43928580 None:intergenic 15.0%
!! ATGTAATCAAATTTCATAAA+AGG + chr3.3:43928163-43928182 None:intergenic 15.0%
!! ATTAAAAAAAAAATAGCGAA+GGG - chr3.3:43928325-43928344 MS.gene064394:intron 15.0%
!! CAAATATATTCTTAATGTAA+AGG + chr3.3:43926705-43926724 None:intergenic 15.0%
!! CATTAATAATCATTGTATAA+TGG + chr3.3:43926529-43926548 None:intergenic 15.0%
!! TATTAAAAAAAAAATAGCGA+AGG - chr3.3:43928324-43928343 MS.gene064394:intron 15.0%
!!! AGAATTTTTCAATAAATAGT+TGG + chr3.3:43926475-43926494 None:intergenic 15.0%
!!! GTAGTTGAAATATTTTAAAT+TGG - chr3.3:43928236-43928255 MS.gene064394:intron 15.0%
!!! TAGTTTTTTATATTATTTCC+AGG + chr3.3:43926224-43926243 None:intergenic 15.0%
!!! TATTTCAACTACATTAATTT+TGG + chr3.3:43928228-43928247 None:intergenic 15.0%
!!! TTACAAATATTTGTTTCTTT+TGG - chr3.3:43928272-43928291 MS.gene064394:intron 15.0%
!! AATTCAAATCCAAACAATAA+TGG - chr3.3:43929282-43929301 MS.gene064394:CDS 20.0%
!! ACTTACTAAGATCAAATTTA+AGG - chr3.3:43928656-43928675 MS.gene064394:intron 20.0%
!! ATTAAAGTGACGTTAATAAT+AGG - chr3.3:43928362-43928381 MS.gene064394:intron 20.0%
!! ATTTGAATTACTTTCAATGA+TGG + chr3.3:43929271-43929290 None:intergenic 20.0%
!! GAATTGAGATTTACAAATAT+TGG - chr3.3:43926142-43926161 MS.gene064394:CDS 20.0%
!! TAATGGAAAAAGACTAATTA+TGG - chr3.3:43925709-43925728 MS.gene064394:CDS 20.0%
!! TCTATATACTAGTGTATATT+GGG - chr3.3:43927913-43927932 MS.gene064394:intron 20.0%
!! TTCATTCAAATAATCGAAAA+CGG - chr3.3:43926578-43926597 MS.gene064394:intron 20.0%
!!! AATAGTTGGCAAATTTTAAT+TGG + chr3.3:43926461-43926480 None:intergenic 20.0%
!!! AGATTATCTTTAAAGAATGA+CGG + chr3.3:43928521-43928540 None:intergenic 20.0%
!!! ATTCAAAAGTTTTACAACAA+TGG - chr3.3:43927274-43927293 MS.gene064394:intron 20.0%
!!! ATTTTTCCTGTAATTAAATC+CGG + chr3.3:43926927-43926946 None:intergenic 20.0%
!!! TAAGATTTTGTTCTTTCAAA+TGG - chr3.3:43927046-43927065 MS.gene064394:intron 20.0%
!!! TAATAAAGACACATTTTCAT+TGG - chr3.3:43928479-43928498 MS.gene064394:intron 20.0%
!!! TGTTTTGATTTTGTTAAGAA+TGG - chr3.3:43926039-43926058 MS.gene064394:CDS 20.0%
!!! TTAACAAATTTTAGCATAGA+TGG - chr3.3:43927569-43927588 MS.gene064394:CDS 20.0%
!!! TTAATTTTTTGGACAAGATT+TGG - chr3.3:43927835-43927854 MS.gene064394:intron 20.0%
!!! TTTTACTAAAAGAGCTAATT+TGG - chr3.3:43925868-43925887 MS.gene064394:CDS 20.0%
!!! TTTTCCATTCCAAAAATATT+TGG + chr3.3:43929159-43929178 None:intergenic 20.0%
! AAAAAGACTAATTATGGATG+AGG - chr3.3:43925715-43925734 MS.gene064394:CDS 25.0%
! AAAGAAGAATGATCATTTGA+TGG + chr3.3:43926121-43926140 None:intergenic 25.0%
! AAATTTGCATCTCAAGATTA+AGG - chr3.3:43928593-43928612 MS.gene064394:intron 25.0%
! AATCCAACAATATTAGAAAG+TGG - chr3.3:43928964-43928983 MS.gene064394:intron 25.0%
! ACTTCACAAAAATGTAATGT+GGG - chr3.3:43926255-43926274 MS.gene064394:intron 25.0%
! AGTGTATAACTCTTTGTTAA+TGG + chr3.3:43928732-43928751 None:intergenic 25.0%
! ATAGGTTATCCATAGAAAAA+TGG - chr3.3:43928391-43928410 MS.gene064394:intron 25.0%
! ATATACACTAGTATATAGAC+AGG + chr3.3:43927912-43927931 None:intergenic 25.0%
! CAAAGTTAAACACAAAACTA+CGG - chr3.3:43926285-43926304 MS.gene064394:intron 25.0%
! CTAGTTTAATGACTAACATA+TGG - chr3.3:43927097-43927116 MS.gene064394:intron 25.0%
! GAGATTTACAAATATTGGAT+TGG - chr3.3:43926147-43926166 MS.gene064394:intron 25.0%
! GTCTATATACTAGTGTATAT+TGG - chr3.3:43927912-43927931 MS.gene064394:intron 25.0%
! TAATGACTAACATATGGATT+TGG - chr3.3:43927103-43927122 MS.gene064394:intron 25.0%
! TACTTCACAAAAATGTAATG+TGG - chr3.3:43926254-43926273 MS.gene064394:intron 25.0%
! TAGCGAAGAAAAATGTTATT+TGG - chr3.3:43926633-43926652 MS.gene064394:intron 25.0%
! TATACAAGAGAAAACTGAAA+GGG - chr3.3:43927300-43927319 MS.gene064394:intron 25.0%
! TTATACAAGAGAAAACTGAA+AGG - chr3.3:43927299-43927318 MS.gene064394:intron 25.0%
!! AAAATGAGGTATGTTTTTCT+TGG - chr3.3:43925992-43926011 MS.gene064394:CDS 25.0%
!! AATCTTTTTACAACTTTGAG+AGG - chr3.3:43928565-43928584 MS.gene064394:intron 25.0%
!! AATGTGTCTTTATTAGTTTG+TGG + chr3.3:43928474-43928493 None:intergenic 25.0%
!! GATTATCTTTAAAGAATGAC+GGG + chr3.3:43928520-43928539 None:intergenic 25.0%
!! TAACATTTTTCTTCGCTATA+AGG + chr3.3:43926631-43926650 None:intergenic 25.0%
!! TTCAGTCTTTATTTCGAATT+TGG - chr3.3:43927713-43927732 MS.gene064394:CDS 25.0%
!!! ATGTGTCTTTATTAGTTTGT+GGG + chr3.3:43928473-43928492 None:intergenic 25.0%
AACAATAATGGTACTACCAA+TGG - chr3.3:43929294-43929313 MS.gene064394:CDS 30.0%
AATGTATCACAGATTTCAGA+TGG - chr3.3:43928016-43928035 MS.gene064394:intron 30.0%
AGCAAGATCAGAAACTAATA+TGG - chr3.3:43927465-43927484 MS.gene064394:intron 30.0%
AGTTTGATAAATGTTGTGAC+TGG + chr3.3:43927875-43927894 None:intergenic 30.0%
ATAAATTTCTGAGCCAAGAT+TGG + chr3.3:43929129-43929148 None:intergenic 30.0%
ATAGAGAATATTCTGATGCA+AGG - chr3.3:43925965-43925984 MS.gene064394:CDS 30.0%
ATGGTATGAATATGATTCCA+AGG - chr3.3:43927164-43927183 MS.gene064394:intron 30.0%
ATTGGATATGTGATATGTGT+AGG - chr3.3:43926165-43926184 MS.gene064394:intron 30.0%
CTTGAACATATAACAATGAG+TGG + chr3.3:43927073-43927092 None:intergenic 30.0%
GATCCACTTTCTAATATTGT+TGG + chr3.3:43928970-43928989 None:intergenic 30.0%
GTCATTTGCAATGATACTAT+AGG - chr3.3:43925629-43925648 MS.gene064394:CDS 30.0%
GTTAATAATAGGTGACACAT+AGG - chr3.3:43928373-43928392 MS.gene064394:intron 30.0%
GTTATCCATAGAAAAATGGT+GGG - chr3.3:43928395-43928414 MS.gene064394:intron 30.0%
TAGTATATAGACAGGTTCTA+CGG + chr3.3:43927904-43927923 None:intergenic 30.0%
TTCACAAGAGAGAAAAAACA+TGG - chr3.3:43927222-43927241 MS.gene064394:intron 30.0%
! AAAGACACATTTTCATTGGT+TGG - chr3.3:43928483-43928502 MS.gene064394:intron 30.0%
! ACTTTCAATGATGGAAGTTA+TGG + chr3.3:43929262-43929281 None:intergenic 30.0%
! ATGATCATTTGATGGATGAT+AGG + chr3.3:43926113-43926132 None:intergenic 30.0%
! CAGCTAATAAAGCATTTCAA+GGG - chr3.3:43927347-43927366 MS.gene064394:intron 30.0%
! TCTCAAGTCATGTCTTTTAA+TGG - chr3.3:43925692-43925711 MS.gene064394:CDS 30.0%
! TTGGTAGTACCATTATTGTT+TGG + chr3.3:43929294-43929313 None:intergenic 30.0%
!! AAAAAACATGGTTGACTTGA+TGG - chr3.3:43927234-43927253 MS.gene064394:intron 30.0%
!! AAAAAATCAACTAGTTCTGC+CGG - chr3.3:43926905-43926924 MS.gene064394:CDS 30.0%
!! AATTACCCACCATTTTTCTA+TGG + chr3.3:43928403-43928422 None:intergenic 30.0%
!! CACATAAGTAGATTTTCAAG+TGG - chr3.3:43928445-43928464 MS.gene064394:intron 30.0%
!! GTTTTGGTAACAACATATGA+AGG - chr3.3:43928832-43928851 MS.gene064394:intron 30.0%
!!! AACAATTTTGTTGTTCGACA+AGG - chr3.3:43926658-43926677 MS.gene064394:intron 30.0%
!!! ATGTTTTTTCTCTCTTGTGA+AGG + chr3.3:43927223-43927242 None:intergenic 30.0%
!!! TTCCTTTGAGATTTTCAAAC+CGG - chr3.3:43927740-43927759 MS.gene064394:CDS 30.0%
!!! TTGTTGTAGTTGTTTTTGTG+AGG + chr3.3:43929085-43929104 None:intergenic 30.0%
AACGTGTGTGGCTAAAAAAT+AGG - chr3.3:43926416-43926435 MS.gene064394:intron 35.0%
AAGAATTCAGCCTTGGAATT+TGG + chr3.3:43927384-43927403 None:intergenic 35.0%
ACTAGAGCAGAAGTGAATTT+CGG + chr3.3:43929234-43929253 None:intergenic 35.0%
AGATTTCAGATGGATGTCAA+TGG - chr3.3:43928026-43928045 MS.gene064394:intron 35.0%
AGCTTATTATCGTTGCACAA+TGG - chr3.3:43928093-43928112 MS.gene064394:CDS 35.0%
CTGCATAATATGCTCTTCTA+GGG + chr3.3:43926834-43926853 None:intergenic 35.0%
CTTGGCTCAGAAATTTATGT+CGG - chr3.3:43929131-43929150 MS.gene064394:intron 35.0%
GAAGCAACTGAAGAAAAGAA+TGG - chr3.3:43927145-43927164 MS.gene064394:intron 35.0%
GAGAAAATATGGACAGAAGA+TGG - chr3.3:43928048-43928067 MS.gene064394:intron 35.0%
GCTTATTATCGTTGCACAAT+GGG - chr3.3:43928094-43928113 MS.gene064394:CDS 35.0%
GGATGTCAATGGAGAAAATA+TGG - chr3.3:43928037-43928056 MS.gene064394:intron 35.0%
GGTTATCCATAGAAAAATGG+TGG - chr3.3:43928394-43928413 MS.gene064394:intron 35.0%
GTTTGAGAGAGCTAATTGAT+AGG - chr3.3:43926789-43926808 MS.gene064394:intron 35.0%
TAGAAAAGTTGAAGTAGCGA+CGG - chr3.3:43927614-43927633 MS.gene064394:CDS 35.0%
TCGCTATAAGGCTTATTCTA+GGG + chr3.3:43926619-43926638 None:intergenic 35.0%
TCTAGTGTGATAGTTGGAAA+TGG + chr3.3:43929036-43929055 None:intergenic 35.0%
TGAGAAGAAGAAGAAGAATG+TGG + chr3.3:43925677-43925696 None:intergenic 35.0%
TGTGGCTAAAAAATAGGAAG+TGG - chr3.3:43926422-43926441 MS.gene064394:intron 35.0%
TTCGCTATAAGGCTTATTCT+AGG + chr3.3:43926620-43926639 None:intergenic 35.0%
TTTGTTGCTAGGAGAAATCT+TGG + chr3.3:43925938-43925957 None:intergenic 35.0%
! CCAGCTAATAAAGCATTTCA+AGG - chr3.3:43927346-43927365 MS.gene064394:intron 35.0%
! CCTTGAAATGCTTTATTAGC+TGG + chr3.3:43927349-43927368 None:intergenic 35.0%
! CTAATAAAGCATTTCAAGGG+TGG - chr3.3:43927350-43927369 MS.gene064394:intron 35.0%
! TTGAACATGGGTTTTGCTAA+AGG - chr3.3:43927193-43927212 MS.gene064394:intron 35.0%
! TTTTAGCATAGATGGCTAGT+TGG - chr3.3:43927577-43927596 MS.gene064394:CDS 35.0%
!! GTTGATTTTCAGCATTCGTT+TGG + chr3.3:43926769-43926788 None:intergenic 35.0%
!! TATTGAGCCTCTACTTTTAG+AGG - chr3.3:43927803-43927822 MS.gene064394:CDS 35.0%
!! TTATAAAGTTGAGTTGAGCC+TGG - chr3.3:43926203-43926222 MS.gene064394:intron 35.0%
!!! ATGTCGGCTCCAAATATTTT+TGG - chr3.3:43929147-43929166 MS.gene064394:intron 35.0%
!!! GGCTCCAAATATTTTTGGAA+TGG - chr3.3:43929152-43929171 MS.gene064394:intron 35.0%
!!! TGCTGAAGATAGAAGTGTTT+TGG - chr3.3:43928816-43928835 MS.gene064394:intron 35.0%
AAACCATCTGCACTTGTCAT+TGG + chr3.3:43928940-43928959 None:intergenic 40.0%
AAGTCTCTCTTTGAGTAGTG+TGG - chr3.3:43927771-43927790 MS.gene064394:CDS 40.0%
ACACTACTCAAAGAGAGACT+TGG + chr3.3:43927772-43927791 None:intergenic 40.0%
AGCAGCATACTGTATACACA+AGG + chr3.3:43926729-43926748 None:intergenic 40.0%
ATATGGACAGAAGATGGCAA+AGG - chr3.3:43928054-43928073 MS.gene064394:intron 40.0%
CCAAGGCTGAATTCTTTCAA+GGG - chr3.3:43927388-43927407 MS.gene064394:intron 40.0%
CGATAATAAGCTCTTGGACA+TGG + chr3.3:43928085-43928104 None:intergenic 40.0%
CTTTGAGTAGTGTGGACAAA+AGG - chr3.3:43927779-43927798 MS.gene064394:CDS 40.0%
GATTTCTCCTAGCAACAAAC+TGG - chr3.3:43925939-43925958 MS.gene064394:CDS 40.0%
GCAAAACCCATGTTCAAGAA+TGG + chr3.3:43927190-43927209 None:intergenic 40.0%
GCTGCATAATATGCTCTTCT+AGG + chr3.3:43926835-43926854 None:intergenic 40.0%
GGCTTTCAAACCAAATTCCA+AGG - chr3.3:43927371-43927390 MS.gene064394:intron 40.0%
GTATATACTTGCTTCCGAAC+TGG + chr3.3:43928130-43928149 None:intergenic 40.0%
GTGAGATCTAGTGTGATAGT+TGG + chr3.3:43929042-43929061 None:intergenic 40.0%
GTGCAACGATAATAAGCTCT+TGG + chr3.3:43928091-43928110 None:intergenic 40.0%
GTTCTGCCGGATTTAATTAC+AGG - chr3.3:43926918-43926937 MS.gene064394:CDS 40.0%
TATATAGACAGGTTCTACGG+AGG + chr3.3:43927901-43927920 None:intergenic 40.0%
TATGGACAGAAGATGGCAAA+GGG - chr3.3:43928055-43928074 MS.gene064394:intron 40.0%
TCCAAGGCTGAATTCTTTCA+AGG - chr3.3:43927387-43927406 MS.gene064394:intron 40.0%
TGATGCAAGGAACGAAAATG+AGG - chr3.3:43925978-43925997 MS.gene064394:CDS 40.0%
TGTAGGGTTAGGTCATTAAC+TGG + chr3.3:43925770-43925789 None:intergenic 40.0%
TTATGCAGCTGAAGCAGAAA+CGG - chr3.3:43926846-43926865 MS.gene064394:CDS 40.0%
TTGCCATGGTATGTGAACAA+GGG + chr3.3:43928996-43929015 None:intergenic 40.0%
! GTAGAAAACCTGGACTTGTT+AGG + chr3.3:43926390-43926409 None:intergenic 40.0%
!! ATGATGCTCCATTTGGTGTA+GGG + chr3.3:43925786-43925805 None:intergenic 40.0%
!! CACCGGTTTGAAAATCTCAA+AGG + chr3.3:43927745-43927764 None:intergenic 40.0%
!! CTATCATCCAGTTTGTTGCT+AGG + chr3.3:43925949-43925968 None:intergenic 40.0%
!! GACACATTTTCATTGGTTGG+TGG - chr3.3:43928486-43928505 MS.gene064394:intron 40.0%
!! TTTTTAGCCACACACGTTCA+TGG + chr3.3:43926414-43926433 None:intergenic 40.0%
!!! GGACGGCGTCATTAATTTTT+TGG - chr3.3:43927824-43927843 MS.gene064394:intron 40.0%
ACCACCAACAGCAAAAGCAA+TGG - chr3.3:43928873-43928892 MS.gene064394:intron 45.0%
ACTCCCTTGTTCACATACCA+TGG - chr3.3:43928990-43929009 MS.gene064394:CDS 45.0%
ATGGACAGAAGATGGCAAAG+GGG - chr3.3:43928056-43928075 MS.gene064394:intron 45.0%
CCAAGGCCATTCTTGAACAT+GGG - chr3.3:43927181-43927200 MS.gene064394:intron 45.0%
CCCTTGAAAGAATTCAGCCT+TGG + chr3.3:43927391-43927410 None:intergenic 45.0%
CGTTCATGGTGTAGAAAACC+TGG + chr3.3:43926400-43926419 None:intergenic 45.0%
GCAGAAACGGAGTAAACTTG+AGG - chr3.3:43926859-43926878 MS.gene064394:CDS 45.0%
GGTACTACCAATGGTACAAG+TGG - chr3.3:43929303-43929322 MS.gene064394:CDS 45.0%
GTTGAAGTAGCGACGGAAAA+AGG - chr3.3:43927621-43927640 MS.gene064394:CDS 45.0%
GTTGCCATGGTATGTGAACA+AGG + chr3.3:43928997-43929016 None:intergenic 45.0%
TCACCTCCTTCAACCAATCT+TGG - chr3.3:43929113-43929132 MS.gene064394:intron 45.0%
TCCAAGGCCATTCTTGAACA+TGG - chr3.3:43927180-43927199 MS.gene064394:intron 45.0%
TGACCTAACCCTACACCAAA+TGG - chr3.3:43925775-43925794 MS.gene064394:CDS 45.0%
TTCTACACCATGAACGTGTG+TGG - chr3.3:43926404-43926423 MS.gene064394:intron 45.0%
! AAGAGAGACTTGGTTGACAC+CGG + chr3.3:43927762-43927781 None:intergenic 45.0%
! CTACGTGATGATGCTCCATT+TGG + chr3.3:43925793-43925812 None:intergenic 45.0%
! TCTGAGCCAAGATTGGTTGA+AGG + chr3.3:43929122-43929141 None:intergenic 45.0%
!! GAGCCTCTACTTTTAGAGGA+CGG - chr3.3:43927807-43927826 MS.gene064394:CDS 45.0%
!! GATGATGCTCCATTTGGTGT+AGG + chr3.3:43925787-43925806 None:intergenic 45.0%
!! GATGCCATTGCTTTTGCTGT+TGG + chr3.3:43928880-43928899 None:intergenic 45.0%
!! GCAGCATCAATGCTACTTTC+AGG - chr3.3:43928913-43928932 MS.gene064394:intron 45.0%
!! AAAAAGTAATTTAATTATAT+TGG - chr3.3:43926996-43927015 MS.gene064394:intron 5.0%
CCCATGTTCAAGAATGGCCT+TGG + chr3.3:43927184-43927203 None:intergenic 50.0%
CTGGTCTCCACTTGTACCAT+TGG + chr3.3:43929313-43929332 None:intergenic 50.0%
GGACCAATGACAAGTGCAGA+TGG - chr3.3:43928934-43928953 MS.gene064394:intron 50.0%
! ACGCCGTCCTCTAAAAGTAG+AGG + chr3.3:43927813-43927832 None:intergenic 50.0%
! GAGCCAAGATTGGTTGAAGG+AGG + chr3.3:43929119-43929138 None:intergenic 50.0%
!! ACCTGGACTTGTTAGGTGTC+AGG + chr3.3:43926383-43926402 None:intergenic 50.0%
!! GCTCCATTTGGTGTAGGGTT+AGG + chr3.3:43925781-43925800 None:intergenic 50.0%
!! TGAAGCTGAGAGTGTTGCCA+TGG + chr3.3:43929010-43929029 None:intergenic 50.0%
!! TTGCTGTTGGTGGTAGAGCA+TGG + chr3.3:43928867-43928886 None:intergenic 50.0%
!!! GCCATTGCTTTTGCTGTTGG+TGG + chr3.3:43928877-43928896 None:intergenic 50.0%
GCCTGACACCTAACAAGTCC+AGG - chr3.3:43926379-43926398 MS.gene064394:intron 55.0%
! TGGGCACTGCTTGTCCAGTT+CGG - chr3.3:43928113-43928132 MS.gene064394:CDS 55.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 43925620 43929350 43925620 ID=MS.gene064394
chr3.3 mRNA 43925620 43929350 43925620 ID=MS.gene064394.t1;Parent=MS.gene064394
chr3.3 exon 43929156 43929350 43929156 ID=MS.gene064394.t1.exon1;Parent=MS.gene064394.t1
chr3.3 CDS 43929156 43929350 43929156 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
chr3.3 exon 43928971 43929054 43928971 ID=MS.gene064394.t1.exon2;Parent=MS.gene064394.t1
chr3.3 CDS 43928971 43929054 43928971 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
chr3.3 exon 43928090 43928230 43928090 ID=MS.gene064394.t1.exon3;Parent=MS.gene064394.t1
chr3.3 CDS 43928090 43928230 43928090 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
chr3.3 exon 43927484 43927834 43927484 ID=MS.gene064394.t1.exon4;Parent=MS.gene064394.t1
chr3.3 CDS 43927484 43927834 43927484 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
chr3.3 exon 43926829 43926942 43926829 ID=MS.gene064394.t1.exon5;Parent=MS.gene064394.t1
chr3.3 CDS 43926829 43926942 43926829 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
chr3.3 exon 43925620 43926165 43925620 ID=MS.gene064394.t1.exon6;Parent=MS.gene064394.t1
chr3.3 CDS 43925620 43926165 43925620 ID=cds.MS.gene064394.t1;Parent=MS.gene064394.t1
Gene Sequence

>MS.gene064394

ATGGAAGAAGTCATTTGCAATGATACTATAGGAAATTCTAGTGTTGTTGAAGTTCCACATTCTTCTTCTTCTTCTCAAGTCATGTCTTTTAATGGAAAAAGACTAATTATGGATGAGGTTGATTTCTTTGCAGAGAAGAAAATGAGTCCAGTTAATGACCTAACCCTACACCAAATGGAGCATCATCACGTAGATGTAATTGAACTCATAATTTCATTAGATATTCCATTTTGCAATTTTATTTTATTTTTTACTAAAAGAGCTAATTTGGCTTATCATTGTTGATGACTTTTTAGACTAGTTTAGATCTTCTCACCAAGATTTCTCCTAGCAACAAACTGGATGATAGAGAATATTCTGATGCAAGGAACGAAAATGAGGTATGTTTTTCTTGGTGTTCATCTATAGACTATAGATATTGTTTTGATTTTGTTAAGAATGGTTTTTAATTTTCTTTCACATTATCACAACATATAGCTTTCTATATTTTCCTATCATCCATCAAATGATCATTCTTCTTTCGAATTGAGATTTACAAATATTGGATTGGATATGTGATATGTGTAGGAAATCGATCACTCTATTATAAAGTTGAGTTGAGCCTGGAAATAATATAAAAAACTAAGAAACACGATACTTCACAAAAATGTAATGTGGGAAAACTTCAAAGTTAAACACAAAACTACGGTTTTTGTCTAATGAAGACTAAATAATTAGAACACTCTAATTTTTTTCACAATACATGAAATTTTCTCAAACGCCTGACACCTAACAAGTCCAGGTTTTCTACACCATGAACGTGTGTGGCTAAAAAATAGGAAGTGGACAAATAAATCATCCAATTAAAATTTGCCAACTATTTATTGAAAAATTCTTGAAGCTATTTTTCTTGAGACGTAGCATTTTCCATTATACAATGATTATTAATGATTTTATGCATAAAAAAATACTAAAAGAATTCATTCAAATAATCGAAAACGGTTTCATTTCTTCTTGCCCTAGAATAAGCCTTATAGCGAAGAAAAATGTTATTTGGACAACAATTTTGTTGTTCGACAAGGTGTGTTTGTATGTATATTTTTCCTTTACATTAAGAATATATTTGTCCTTGTGTATACAGTATGCTGCTGTGTTAGCTAAATTGCACCAAACGAATGCTGAAAATCAACGTTTGAGAGAGCTAATTGATAGGCTTAGAATTGATCACAATGCCCTAGAAGAGCATATTATGCAGCTGAAGCAGAAACGGAGTAAACTTGAGGTAGTTCTATTCTTTCTTTTATAAAAAAAATCAACTAGTTCTGCCGGATTTAATTACAGGAAAAATAATTAATTATAATCATATTGAAAATAATTTAATTATATAATACAATTAAAAAAAGTAATTTAATTATATTGGATTTAAAGTTTAAAGTATAACTTATTTTAAGATTTTGTTCTTTCAAATGGACCACTCATTGTTATATGTTCAAGCTAGCTAGTTTAATGACTAACATATGGATTTGGTTTTGTATAGATTAATGATGAAGCAACTGAAGAAAAGAATGGTATGAATATGATTCCAAGGCCATTCTTGAACATGGGTTTTGCTAAAGGTGAGCCTTCACAAGAGAGAAAAAACATGGTTGACTTGATGGAATGTGATAAAAAGAGTATTCAAAAGTTTTACAACAATGGAATTATACAAGAGAAAACTGAAAGGGAAGAAGATCATCATGAGAATTCACCAGCTAATAAAGCATTTCAAGGGTGGCTTTCAAACCAAATTCCAAGGCTGAATTCTTTCAAGGGTGTTGATGATCAAGCTTCAGAATCAATGATTAAGAAAGCTCGTGTCTCAGTTAGAGCAAGATCAGAAACTAATATGGTTAGTGTTAGATTAAGTAGCAAATCATGCATGTTTATATCTTTCAAAACTTTTCAATTAATGAAATCTCACATCTAGTTAATTAACAAATTTTAGCATAGATGGCTAGTTGGTGAATTCTAACAGATAGAAAAGTTGAAGTAGCGACGGAAAAAGGCAAAATATGTCTCTAACTTCATCGCTAAGTGTTTAATTTAGTGAGCAATTTTATTTTTATGTCTCAAATTTCAGTCTTTATTTCGAATTTGGTGAATTCCTTTGAGATTTTCAAACCGGTGTCAACCAAGTCTCTCTTTGAGTAGTGTGGACAAAAGGATATTGAGCCTCTACTTTTAGAGGACGGCGTCATTAATTTTTTGGACAAGATTTGGACAATTTTCAAACACCAGTCACAACATTTATCAAACTAGTCCTCCGTAGAACCTGTCTATATACTAGTGTATATTGGGTGTGTATTGTTGAAGTACAACGATATTGTATTCTCTATGAATTATAATTGCTGCTAGACTAATTTTCTTTTTGATCAATTAATGTATCACAGATTTCAGATGGATGTCAATGGAGAAAATATGGACAGAAGATGGCAAAGGGGAATCCATGTCCAAGAGCTTATTATCGTTGCACAATGGGCACTGCTTGTCCAGTTCGGAAGCAAGTATATACAATCTCTCTACCTTTTATGAAATTTGATTACATACTTTTATGTTCAGTAATTTGCACATATAGAAAAGAGTCAGTCCAAAATTAATGTAGTTGAAATATTTTAAATTGGTTCTAATATAAAGTTACAAATATTTGTTTCTTTTGGTCACTCATATAGACTTGTTAAGATTTTTTTATTAAAAAAAAAATAGCGAAGGGCAAAATTATTTTTAATTAAAGTGACGTTAATAATAGGTGACACATAGGTTATCCATAGAAAAATGGTGGGTAATTTATCTAATTAATGAACATTAGTCACATAAGTAGATTTTCAAGTGGCACCCACAAACTAATAAAGACACATTTTCATTGGTTGGTGGATAAGTTACCCGTCATTCTTTAAAGATAATCTAGAAGAAGAAAAAAAAACCTTAATAATCTTTTTACAACTTTGAGAGGATTTAAAATTTGCATCTCAAGATTAAGGTCAAATTCTTAACTACTTAGCAGACTTTGTGAACATATAAACTTACTAAGATCAAATTTAAGGTTCATAAAATTTTTAAAAAGAGAAATTTGATCAACTTGACTTAATAAAGACCATTAACAAAGAGTTATACACTTTTTATACATTTTAATTATTCATTTAATTGTTATGCTTATTTATTAAATATAGGTTCAAAGATGTGCTGAAGATAGAAGTGTTTTGGTAACAACATATGAAGGACAACATAACCATGCTCTACCACCAACAGCAAAAGCAATGGCATCAACAACAACATCAGCAGCATCAATGCTACTTTCAGGACCAATGACAAGTGCAGATGGTTTAATAAATCCAACAATATTAGAAAGTGGATCACTCCCTTGTTCACATACCATGGCAACACTCTCAGCTTCAGCTCCATTTCCAACTATCACACTAGATCTCACTGAAGAAGCTATCAATAATTCCTCACAAAAACAACTACAACAAAGTCAATTTCACCTCCTTCAACCAATCTTGGCTCAGAAATTTATGTCGGCTCCAAATATTTTTGGAATGGAAAATGCTTCATTTGCTGATACAGTTAGTGCTGCAACAGCTGCTATGACTTCTGATCCGAAATTCACTTCTGCTCTAGTTGCTGCCATAACTTCCATCATTGAAAGTAATTCAAATCCAAACAATAATGGTACTACCAATGGTACAAGTGGAGACCAGAATTGCAATAAAGCTTAA
Protein sequence

>MS.gene064394.t1

MEEVICNDTIGNSSVVEVPHSSSSSQVMSFNGKRLIMDEVDFFAEKKMSPVNDLTLHQMEHHHVDTSLDLLTKISPSNKLDDREYSDARNENEYAAVLAKLHQTNAENQRLRELIDRLRIDHNALEEHIMQLKQKRSKLEINDEATEEKNGMNMIPRPFLNMGFAKGEPSQERKNMVDLMECDKKSIQKFYNNGIIQEKTEREEDHHENSPANKAFQGWLSNQIPRLNSFKGVDDQASESMIKKARVSVRARSETNMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGTACPVRKQVQRCAEDRSVLVTTYEGQHNHALPPTAKAMASTTTSAASMLLSGPMTSADGLINPTILESGSLPCSHTMATLSASAPFPTITLDLTEEAINNSSQKQLQQSQFHLLQPILAQKFMSAPNIFGMENASFADTVSAATAAMTSDPKFTSALVAAITSIIESNSNPNNNGTTNGTSGDQNCNKA