AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064515

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064515.t1 MTR_5g039760 66.019 206 45 2 1 205 1 182 2.56e-92 273
MS.gene064515.t1 MTR_7g074790 64.607 178 45 1 1 178 1 160 2.36e-77 236
MS.gene064515.t1 MTR_7g061980 85.714 119 17 0 1 119 1 119 4.70e-70 214
MS.gene064515.t1 MTR_0402s0040 44.751 181 95 4 10 187 26 204 1.28e-37 140
MS.gene064515.t1 MTR_0558s0020 30.855 269 163 5 2 250 31 296 5.18e-37 134
MS.gene064515.t1 MTR_6g051425 31.579 266 170 5 9 264 13 276 3.49e-33 125
MS.gene064515.t1 MTR_8g446020 32.768 177 117 1 76 250 80 256 3.88e-28 110
MS.gene064515.t1 MTR_6g090505 31.602 231 142 4 42 257 9 238 3.28e-27 110
MS.gene064515.t1 MTR_4g069880 72.059 68 19 0 1 68 1 68 4.55e-27 101
MS.gene064515.t1 MTR_4g102720 33.918 171 79 2 5 175 2 138 2.31e-26 104
MS.gene064515.t1 MTR_1g083640 25.820 244 158 5 2 225 46 286 1.45e-22 95.9
MS.gene064515.t1 MTR_1g070355 27.731 238 163 4 16 247 80 314 1.94e-22 98.2
MS.gene064515.t1 MTR_7g446510 30.526 190 132 0 69 258 140 329 1.52e-20 90.9
MS.gene064515.t1 MTR_7g446480 31.977 172 117 0 87 258 143 314 3.67e-19 87.0
MS.gene064515.t1 MTR_7g446520 26.667 225 150 1 16 240 94 303 2.32e-18 84.7
MS.gene064515.t1 MTR_5g015480 43.902 123 65 3 10 129 56 177 7.23e-18 82.4
MS.gene064515.t1 MTR_5g076070 24.454 229 168 3 13 238 56 282 6.08e-17 80.1
MS.gene064515.t1 MTR_4g035820 26.493 268 184 7 10 269 75 337 2.57e-16 80.1
MS.gene064515.t1 MTR_2g099430 47.727 88 44 2 33 119 26 112 3.96e-16 73.9
MS.gene064515.t1 MTR_2g070590 42.453 106 57 3 10 112 17 121 1.18e-15 72.8
MS.gene064515.t1 MTR_1g013060 27.189 217 151 4 1 211 15 230 3.20e-15 74.3
MS.gene064515.t1 MTR_7g113010 40.945 127 59 5 10 134 457 569 1.99e-14 74.3
MS.gene064515.t1 MTR_0337s0040 27.778 144 102 1 76 217 81 224 1.11e-13 69.7
MS.gene064515.t1 MTR_1g019850 32.624 141 86 3 3 141 63 196 1.81e-13 69.3
MS.gene064515.t1 MTR_2g014100 25.238 210 134 5 2 191 39 245 6.96e-13 67.8
MS.gene064515.t1 MTR_6g022080 28.947 152 103 4 22 169 97 247 2.71e-11 63.2
MS.gene064515.t1 MTR_1g057920 42.222 90 48 3 10 96 34 122 5.95e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064515.t1 AT4G38180 32.659 346 212 6 7 332 70 414 2.79e-52 184
MS.gene064515.t1 AT4G15090 29.513 349 225 6 3 332 44 390 1.02e-44 163
MS.gene064515.t1 AT4G15090 29.513 349 225 6 3 332 44 390 1.02e-44 163
MS.gene064515.t1 AT4G15090 29.513 349 225 6 3 332 44 390 1.02e-44 163
MS.gene064515.t1 AT4G15090 29.513 349 225 6 3 332 44 390 1.02e-44 163
MS.gene064515.t1 AT4G15090 29.513 349 225 6 3 332 44 390 1.02e-44 163
MS.gene064515.t1 AT1G76320 30.769 325 189 9 14 316 1 311 6.46e-35 134
MS.gene064515.t1 AT1G76320 30.769 325 189 9 14 316 1 311 8.78e-35 134
MS.gene064515.t1 AT1G76320 30.769 325 189 9 14 316 1 311 9.52e-35 134
MS.gene064515.t1 AT1G76320 30.769 325 189 9 14 316 1 311 9.52e-35 134
MS.gene064515.t1 AT3G06250 28.616 318 169 8 9 308 189 466 2.02e-34 134
MS.gene064515.t1 AT3G06250 35.185 108 54 3 5 110 23 116 4.14e-11 64.7
MS.gene064515.t1 AT3G06250 28.616 318 169 8 9 308 189 466 2.02e-34 134
MS.gene064515.t1 AT3G06250 35.185 108 54 3 5 110 23 116 4.14e-11 64.7
MS.gene064515.t1 AT3G06250 28.616 318 169 8 9 308 189 466 2.02e-34 134
MS.gene064515.t1 AT3G06250 35.185 108 54 3 5 110 23 116 4.14e-11 64.7
MS.gene064515.t1 AT3G22170 28.771 358 194 9 9 332 69 399 1.70e-33 131
MS.gene064515.t1 AT3G22170 28.771 358 194 9 9 332 69 399 1.70e-33 131
MS.gene064515.t1 AT2G27110 29.179 329 187 7 9 319 48 348 2.28e-33 130
MS.gene064515.t1 AT2G27110 29.179 329 187 7 9 319 48 348 2.28e-33 130
MS.gene064515.t1 AT5G18960 26.140 329 182 8 9 316 210 498 8.51e-30 120
MS.gene064515.t1 AT5G18960 35.965 114 53 4 9 116 42 141 1.28e-11 66.2
MS.gene064515.t1 AT5G18960 26.140 329 182 8 9 316 210 498 8.51e-30 120
MS.gene064515.t1 AT5G18960 35.965 114 53 4 9 116 42 141 1.28e-11 66.2
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 24 336 2.74e-29 119
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 24 336 2.74e-29 119
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 24 336 2.77e-29 119
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 24 336 2.77e-29 119
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 24 336 2.79e-29 119
MS.gene064515.t1 AT4G19990 24.928 349 195 6 13 330 38 350 2.94e-29 118
MS.gene064515.t1 AT2G32250 26.606 327 178 7 13 321 41 323 3.57e-26 109
MS.gene064515.t1 AT2G32250 27.302 315 167 7 13 309 41 311 3.67e-26 109
MS.gene064515.t1 AT2G32250 27.302 315 167 7 13 309 41 311 3.67e-26 109
MS.gene064515.t1 AT2G32250 27.302 315 167 7 13 309 41 311 3.93e-26 109
MS.gene064515.t1 AT2G32250 27.302 315 167 7 13 309 41 311 3.93e-26 109
MS.gene064515.t1 AT2G32250 27.302 315 167 7 13 309 41 311 3.93e-26 109
MS.gene064515.t1 AT2G32250 26.380 326 178 7 14 321 1 282 2.41e-25 107
MS.gene064515.t1 AT2G32250 26.380 326 178 7 14 321 1 282 2.57e-25 107
MS.gene064515.t1 AT2G27110 35.570 149 80 1 187 319 55 203 5.84e-25 105
MS.gene064515.t1 AT4G19990 26.087 276 150 4 73 330 40 279 6.41e-25 105
MS.gene064515.t1 AT1G10240 26.380 326 210 9 10 309 48 369 2.26e-24 104
MS.gene064515.t1 AT1G10240 26.380 326 210 9 10 309 48 369 2.26e-24 104
MS.gene064515.t1 AT1G52520 25.000 332 209 7 10 319 85 398 1.58e-23 101
MS.gene064515.t1 AT1G80010 25.000 328 215 6 9 311 94 415 4.47e-22 97.4
MS.gene064515.t1 AT5G28530 23.824 340 219 7 5 309 50 384 4.20e-21 94.7
MS.gene064515.t1 AT5G28530 23.824 340 219 7 5 309 50 384 4.20e-21 94.7
MS.gene064515.t1 AT5G28530 23.824 340 219 7 5 309 50 384 5.13e-21 94.4
MS.gene064515.t1 AT4G38170 35.433 127 61 3 190 299 24 146 5.21e-15 76.3
MS.gene064515.t1 AT3G07500 43.269 104 56 3 9 110 32 134 4.63e-13 67.8

Find 62 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAGAGGCTAGTAAATTT+TGG 0.221773 5.3:+63219619 MS.gene064515:CDS
TCAAATCCCATTCCAATCTT+TGG 0.252212 5.3:-63219591 None:intergenic
GTGTGATGCACAGATGATTT+TGG 0.260666 5.3:+63220217 MS.gene064515:CDS
CCCTTGCCATTGCTTGATCT+TGG 0.267996 5.3:-63220412 None:intergenic
ATTGTTTGATACATTCTTAC+AGG 0.282596 5.3:+63220352 MS.gene064515:CDS
GCTTGCTTATAGTTTCTGTA+TGG 0.306576 5.3:+63219641 MS.gene064515:CDS
ACATGGCATTTGTTACAAAA+TGG 0.322826 5.3:+63220476 MS.gene064515:CDS
TGGCTAATGACTCTGGATTA+AGG 0.326845 5.3:+63219967 MS.gene064515:CDS
TGGAATGGGATTTGATTCTA+TGG 0.332757 5.3:+63219599 MS.gene064515:CDS
AACATATTACAAATGTGTTT+TGG 0.337041 5.3:+63220195 MS.gene064515:CDS
CAAAATGGAGTTAAACATCT+TGG 0.359049 5.3:+63220491 MS.gene064515:CDS
TGGTCAGTGAAGATTGTCTT+TGG 0.368243 5.3:-63220392 None:intergenic
ATATGACTGAACCTCTATAA+TGG 0.385091 5.3:-63220331 None:intergenic
TCTCTGAAATTTGTAGATCA+TGG 0.390016 5.3:-63219884 None:intergenic
ATGTCGATTGGTTTGTTGTA+AGG 0.397901 5.3:+63219719 MS.gene064515:CDS
GCAAGCATATGAGATTGATT+TGG 0.403796 5.3:+63219947 MS.gene064515:CDS
TATAGTTTCTGTATGGGCTT+CGG 0.408561 5.3:+63219648 MS.gene064515:CDS
ATTACACTTTCTCGTAAGAA+TGG 0.418220 5.3:+63219825 MS.gene064515:CDS
TCTGGTTTCAACCATTATAG+AGG 0.429408 5.3:+63220320 MS.gene064515:CDS
ATTGATTTGGCTAATGACTC+TGG 0.429637 5.3:+63219960 MS.gene064515:CDS
AAAATGGAGTTAAACATCTT+GGG 0.438747 5.3:+63220492 MS.gene064515:CDS
AGTATGGCGTATGGCGAGAT+TGG 0.439808 5.3:+63220095 MS.gene064515:CDS
TGGCATCTTCAGATGATGAT+TGG 0.443033 5.3:+63219565 MS.gene064515:CDS
GATGATTGGAAACCAAAGAT+TGG 0.443445 5.3:+63219579 MS.gene064515:CDS
TGGAAACCAAAGATTGGAAT+GGG 0.444346 5.3:+63219585 MS.gene064515:CDS
CTTGCTTATAGTTTCTGTAT+GGG 0.460395 5.3:+63219642 MS.gene064515:CDS
ACTGTACCAACCATGCCAAT+AGG 0.468155 5.3:+63220282 MS.gene064515:CDS
GTTGTAAGGAAGGGCTAAAG+AGG 0.472997 5.3:+63219733 MS.gene064515:CDS
TTCTCGTAAGAATGGAAAGT+TGG 0.483302 5.3:+63219833 MS.gene064515:CDS
CAGAGACAACACACATGCTT+CGG 0.486204 5.3:+63219901 MS.gene064515:CDS
GGGATTTGATTCTATGGAAG+AGG 0.495105 5.3:+63219605 MS.gene064515:CDS
GAGAAAAGATATGCATATGA+AGG 0.500242 5.3:+63219759 MS.gene064515:CDS
TAAGGAAGGGCTAAAGAGGA+AGG 0.502968 5.3:+63219737 MS.gene064515:CDS
CGATTGGTTTGTTGTAAGGA+AGG 0.503555 5.3:+63219723 MS.gene064515:CDS
CTTCTTTCATGCATATCAGA+TGG 0.507409 5.3:+63220163 MS.gene064515:CDS
TATGTTTGTCTTCAAAGTCA+TGG 0.512296 5.3:-63219860 None:intergenic
CATAAACCATGATGAGTCTC+GGG 0.518603 5.3:-63220452 None:intergenic
GCGAGATTGGATGTCTTTCA+CGG 0.526117 5.3:+63220108 MS.gene064515:CDS
CAACTTATGAGCACACAAGC+AGG 0.527478 5.3:+63220005 MS.gene064515:CDS
CTCATCATGGTTTATGCACA+TGG 0.528564 5.3:+63220459 MS.gene064515:CDS
TTGGAAACCAAAGATTGGAA+TGG 0.532585 5.3:+63219584 MS.gene064515:CDS
CATCTGATATGCATGAAAGA+AGG 0.541375 5.3:-63220162 None:intergenic
GCATAAACCATGATGAGTCT+CGG 0.547827 5.3:-63220453 None:intergenic
TAGTGTATCGTCATGTCGAT+TGG 0.553968 5.3:+63219707 MS.gene064515:CDS
ACCAAGATCAAGCAATGGCA+AGG 0.557252 5.3:+63220411 MS.gene064515:CDS
GAGAAAGTGTAATTCTTGCA+AGG 0.558104 5.3:-63219815 None:intergenic
AAGTGGCCTATTGGCATGGT+TGG 0.563834 5.3:-63220288 None:intergenic
GATTGGTTTGTTGTAAGGAA+GGG 0.585108 5.3:+63219724 MS.gene064515:CDS
GCAGGGCATAGAGCTAATGT+TGG 0.587433 5.3:+63220023 MS.gene064515:CDS
CATCTTGGGAACTTGATGAC+GGG 0.592368 5.3:+63220506 MS.gene064515:CDS
ACATCTTGGGAACTTGATGA+CGG 0.592717 5.3:+63220505 MS.gene064515:CDS
TGATATGCATGAAAGAAGGA+TGG 0.595909 5.3:-63220158 None:intergenic
AAGGCAATTTGTTCTAACAT+CGG 0.596957 5.3:-63219796 None:intergenic
AAGCAAGTGGCCTATTGGCA+TGG 0.598989 5.3:-63220292 None:intergenic
AACTTATGAGCACACAAGCA+GGG 0.601558 5.3:+63220006 MS.gene064515:CDS
AGCTAATGTTGGATTTACAA+AGG 0.609390 5.3:+63220034 MS.gene064515:CDS
GTGATGCCCGAGACTCATCA+TGG 0.618218 5.3:+63220446 MS.gene064515:CDS
CACTGACCAAGATCAAGCAA+TGG 0.631892 5.3:+63220406 MS.gene064515:CDS
CTTGGGAACTTGATGACGGG+AGG 0.649703 5.3:+63220509 MS.gene064515:CDS
CCAAGATCAAGCAATGGCAA+GGG 0.649905 5.3:+63220412 MS.gene064515:CDS
TAATGTTGGATTTACAAAGG+TGG 0.674204 5.3:+63220037 MS.gene064515:CDS
GGCATGGTTGGTACAGTACG+TGG 0.693635 5.3:-63220276 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCGTAAACAAAAAAAAAGA+TGG + chr5.3:63219684-63219703 MS.gene064515:CDS 20.0%
!!! AACATATTACAAATGTGTTT+TGG + chr5.3:63220195-63220214 MS.gene064515:CDS 20.0%
! AAAATGGAGTTAAACATCTT+GGG + chr5.3:63220492-63220511 MS.gene064515:CDS 25.0%
! ATTGTTTGATACATTCTTAC+AGG + chr5.3:63220352-63220371 MS.gene064515:CDS 25.0%
AAACCAGAAAAAAAAGCAAG+TGG - chr5.3:63220308-63220327 None:intergenic 30.0%
AGCTAATGTTGGATTTACAA+AGG + chr5.3:63220034-63220053 MS.gene064515:CDS 30.0%
ATATGACTGAACCTCTATAA+TGG - chr5.3:63220334-63220353 None:intergenic 30.0%
ATTACACTTTCTCGTAAGAA+TGG + chr5.3:63219825-63219844 MS.gene064515:CDS 30.0%
CAAAATGGAGTTAAACATCT+TGG + chr5.3:63220491-63220510 MS.gene064515:CDS 30.0%
CTTGCTTATAGTTTCTGTAT+GGG + chr5.3:63219642-63219661 MS.gene064515:CDS 30.0%
GAGAAAAGATATGCATATGA+AGG + chr5.3:63219759-63219778 MS.gene064515:CDS 30.0%
TAATGTTGGATTTACAAAGG+TGG + chr5.3:63220037-63220056 MS.gene064515:CDS 30.0%
TATGTTTGTCTTCAAAGTCA+TGG - chr5.3:63219863-63219882 None:intergenic 30.0%
TGAGAGAAGAAAAAGAAGTA+TGG + chr5.3:63220079-63220098 MS.gene064515:CDS 30.0%
! AAGGCAATTTGTTCTAACAT+CGG - chr5.3:63219799-63219818 None:intergenic 30.0%
! ACATGGCATTTGTTACAAAA+TGG + chr5.3:63220476-63220495 MS.gene064515:CDS 30.0%
! ATTTTGGATTACGGGTATTT+TGG + chr5.3:63220233-63220252 MS.gene064515:CDS 30.0%
! GTATTTTCAACGACAATTGT+TGG + chr5.3:63220130-63220149 MS.gene064515:CDS 30.0%
!! TCTCTGAAATTTGTAGATCA+TGG - chr5.3:63219887-63219906 None:intergenic 30.0%
AAAAAAAGCAAGTGGCCTAT+TGG - chr5.3:63220300-63220319 None:intergenic 35.0%
CATCTGATATGCATGAAAGA+AGG - chr5.3:63220165-63220184 None:intergenic 35.0%
CTTCTTTCATGCATATCAGA+TGG + chr5.3:63220163-63220182 MS.gene064515:CDS 35.0%
GATGATTGGAAACCAAAGAT+TGG + chr5.3:63219579-63219598 MS.gene064515:CDS 35.0%
GCAAGCATATGAGATTGATT+TGG + chr5.3:63219947-63219966 MS.gene064515:CDS 35.0%
GCTTGCTTATAGTTTCTGTA+TGG + chr5.3:63219641-63219660 MS.gene064515:CDS 35.0%
TATAGTTTCTGTATGGGCTT+CGG + chr5.3:63219648-63219667 MS.gene064515:CDS 35.0%
TCAAATCCCATTCCAATCTT+TGG - chr5.3:63219594-63219613 None:intergenic 35.0%
TGATATGCATGAAAGAAGGA+TGG - chr5.3:63220161-63220180 None:intergenic 35.0%
TGGAAACCAAAGATTGGAAT+GGG + chr5.3:63219585-63219604 MS.gene064515:CDS 35.0%
TGGAATGGGATTTGATTCTA+TGG + chr5.3:63219599-63219618 MS.gene064515:CDS 35.0%
TTCTCGTAAGAATGGAAAGT+TGG + chr5.3:63219833-63219852 MS.gene064515:CDS 35.0%
TTGGAAACCAAAGATTGGAA+TGG + chr5.3:63219584-63219603 MS.gene064515:CDS 35.0%
! AGAAAAAGAAGTATGGCGTA+TGG + chr5.3:63220086-63220105 MS.gene064515:CDS 35.0%
! CACAGATGATTTTGGATTAC+GGG + chr5.3:63220225-63220244 MS.gene064515:CDS 35.0%
! GAGAAAGTGTAATTCTTGCA+AGG - chr5.3:63219818-63219837 None:intergenic 35.0%
! GCACAGATGATTTTGGATTA+CGG + chr5.3:63220224-63220243 MS.gene064515:CDS 35.0%
! TCTGGTTTCAACCATTATAG+AGG + chr5.3:63220320-63220339 MS.gene064515:CDS 35.0%
! TGGAAGAGGCTAGTAAATTT+TGG + chr5.3:63219619-63219638 MS.gene064515:CDS 35.0%
!! ATGTCGATTGGTTTGTTGTA+AGG + chr5.3:63219719-63219738 MS.gene064515:CDS 35.0%
!! ATTGATTTGGCTAATGACTC+TGG + chr5.3:63219960-63219979 MS.gene064515:CDS 35.0%
!! GATTGGTTTGTTGTAAGGAA+GGG + chr5.3:63219724-63219743 MS.gene064515:CDS 35.0%
!!! TTTTGGCGATGTTGTTTCTT+TGG + chr5.3:63220250-63220269 MS.gene064515:CDS 35.0%
AACTTATGAGCACACAAGCA+GGG + chr5.3:63220006-63220025 MS.gene064515:CDS 40.0%
ACATCTTGGGAACTTGATGA+CGG + chr5.3:63220505-63220524 MS.gene064515:CDS 40.0%
CATAAACCATGATGAGTCTC+GGG - chr5.3:63220455-63220474 None:intergenic 40.0%
CTCATCATGGTTTATGCACA+TGG + chr5.3:63220459-63220478 MS.gene064515:CDS 40.0%
GCATAAACCATGATGAGTCT+CGG - chr5.3:63220456-63220475 None:intergenic 40.0%
GGGATTTGATTCTATGGAAG+AGG + chr5.3:63219605-63219624 MS.gene064515:CDS 40.0%
TAGTGTATCGTCATGTCGAT+TGG + chr5.3:63219707-63219726 MS.gene064515:CDS 40.0%
TGGCATCTTCAGATGATGAT+TGG + chr5.3:63219565-63219584 MS.gene064515:CDS 40.0%
TGGCTAATGACTCTGGATTA+AGG + chr5.3:63219967-63219986 MS.gene064515:CDS 40.0%
TGGTCAGTGAAGATTGTCTT+TGG - chr5.3:63220395-63220414 None:intergenic 40.0%
! GTGTGATGCACAGATGATTT+TGG + chr5.3:63220217-63220236 MS.gene064515:CDS 40.0%
!! CGATTGGTTTGTTGTAAGGA+AGG + chr5.3:63219723-63219742 MS.gene064515:CDS 40.0%
!!! AGGCCACTTGCTTTTTTTTC+TGG + chr5.3:63220302-63220321 MS.gene064515:CDS 40.0%
ACCAAGATCAAGCAATGGCA+AGG + chr5.3:63220411-63220430 MS.gene064515:CDS 45.0%
ACTGTACCAACCATGCCAAT+AGG + chr5.3:63220282-63220301 MS.gene064515:CDS 45.0%
CAACTTATGAGCACACAAGC+AGG + chr5.3:63220005-63220024 MS.gene064515:CDS 45.0%
CACTGACCAAGATCAAGCAA+TGG + chr5.3:63220406-63220425 MS.gene064515:CDS 45.0%
CAGAGACAACACACATGCTT+CGG + chr5.3:63219901-63219920 MS.gene064515:CDS 45.0%
CCAAGATCAAGCAATGGCAA+GGG + chr5.3:63220412-63220431 MS.gene064515:CDS 45.0%
GCGAGATTGGATGTCTTTCA+CGG + chr5.3:63220108-63220127 MS.gene064515:CDS 45.0%
GTTGTAAGGAAGGGCTAAAG+AGG + chr5.3:63219733-63219752 MS.gene064515:CDS 45.0%
TAAGGAAGGGCTAAAGAGGA+AGG + chr5.3:63219737-63219756 MS.gene064515:CDS 45.0%
! CATCTTGGGAACTTGATGAC+GGG + chr5.3:63220506-63220525 MS.gene064515:CDS 45.0%
AAGCAAGTGGCCTATTGGCA+TGG - chr5.3:63220295-63220314 None:intergenic 50.0%
AAGTGGCCTATTGGCATGGT+TGG - chr5.3:63220291-63220310 None:intergenic 50.0%
AGTATGGCGTATGGCGAGAT+TGG + chr5.3:63220095-63220114 MS.gene064515:CDS 50.0%
CCCTTGCCATTGCTTGATCT+TGG - chr5.3:63220415-63220434 None:intergenic 50.0%
GCAGGGCATAGAGCTAATGT+TGG + chr5.3:63220023-63220042 MS.gene064515:CDS 50.0%
GTGATGCCCGAGACTCATCA+TGG + chr5.3:63220446-63220465 MS.gene064515:CDS 55.0%
! GGCATGGTTGGTACAGTACG+TGG - chr5.3:63220279-63220298 None:intergenic 55.0%
!! CTTGGGAACTTGATGACGGG+AGG + chr5.3:63220509-63220528 MS.gene064515:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 63219564 63220562 63219564 ID=MS.gene064515
chr5.3 mRNA 63219564 63220562 63219564 ID=MS.gene064515.t1;Parent=MS.gene064515
chr5.3 exon 63219564 63220562 63219564 ID=MS.gene064515.t1.exon1;Parent=MS.gene064515.t1
chr5.3 CDS 63219564 63220562 63219564 ID=cds.MS.gene064515.t1;Parent=MS.gene064515.t1
Gene Sequence

>MS.gene064515

ATGGCATCTTCAGATGATGATTGGAAACCAAAGATTGGAATGGGATTTGATTCTATGGAAGAGGCTAGTAAATTTTGGCTTGCTTATAGTTTCTGTATGGGCTTCGGAGTTAGAGTACGTTTCGTAAACAAAAAAAAAGATGGTAGTGTATCGTCATGTCGATTGGTTTGTTGTAAGGAAGGGCTAAAGAGGAAGGAGAAAAGATATGCATATGAAGGAAAATATAAGAGAGCCGATGTTAGAACAAATTGCCTTGCAAGAATTACACTTTCTCGTAAGAATGGAAAGTTGGTCATCCATGACTTTGAAGACAAACATAACCATGATCTACAAATTTCAGAGACAACACACATGCTTCGGTCACATAGAAAGATAACTGAAGTGCAAGCATATGAGATTGATTTGGCTAATGACTCTGGATTAAGGCAGAAGTCAACATTTCAACTTATGAGCACACAAGCAGGGCATAGAGCTAATGTTGGATTTACAAAGGTGGATGTAAGAAACTACATCACTGAGAGAAGAAAAAGAAGTATGGCGTATGGCGAGATTGGATGTCTTTCACGGTATTTTCAACGACAATTGTTGGAGAATCCATCCTTCTTTCATGCATATCAGATGGATGTAGAAGAACATATTACAAATGTGTTTTGGTGTGATGCACAGATGATTTTGGATTACGGGTATTTTGGCGATGTTGTTTCTTTGGACACCACGTACTGTACCAACCATGCCAATAGGCCACTTGCTTTTTTTTCTGGTTTCAACCATTATAGAGGTTCAGTCATATTGTTTGATACATTCTTACAGGCACACAACAACAAAAAACCAAAGACAATCTTCACTGACCAAGATCAAGCAATGGCAAGGGCAGTTGCAGATGTGATGCCCGAGACTCATCATGGTTTATGCACATGGCATTTGTTACAAAATGGAGTTAAACATCTTGGGAACTTGATGACGGGAGGATCTTCTTTGCTTAGTGATATCAAAAAATGA
Protein sequence

>MS.gene064515.t1

MASSDDDWKPKIGMGFDSMEEASKFWLAYSFCMGFGVRVRFVNKKKDGSVSSCRLVCCKEGLKRKEKRYAYEGKYKRADVRTNCLARITLSRKNGKLVIHDFEDKHNHDLQISETTHMLRSHRKITEVQAYEIDLANDSGLRQKSTFQLMSTQAGHRANVGFTKVDVRNYITERRKRSMAYGEIGCLSRYFQRQLLENPSFFHAYQMDVEEHITNVFWCDAQMILDYGYFGDVVSLDTTYCTNHANRPLAFFSGFNHYRGSVILFDTFLQAHNNKKPKTIFTDQDQAMARAVADVMPETHHGLCTWHLLQNGVKHLGNLMTGGSSLLSDIKK