AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064632

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064632.t1 MTR_3g056010 91.304 207 18 0 1 207 1 207 3.77e-139 405
MS.gene064632.t1 MTR_3g056010 85.965 114 11 1 444 557 189 297 4.87e-59 198
MS.gene064632.t1 MTR_3g056025 91.304 207 18 0 1 207 1 207 5.12e-139 404
MS.gene064632.t1 MTR_3g056025 85.841 113 11 1 444 556 189 296 1.45e-58 197
MS.gene064632.t1 MTR_7g029020 85.507 207 30 0 1 207 1 207 1.47e-129 380
MS.gene064632.t1 MTR_7g029020 73.228 127 25 2 434 556 175 296 6.85e-52 179
MS.gene064632.t1 MTR_3g099940 84.615 208 31 1 1 207 1 208 3.48e-126 372
MS.gene064632.t1 MTR_3g099940 76.577 111 21 1 444 554 190 295 6.96e-49 171
MS.gene064632.t1 MTR_5g094390 78.261 207 45 0 1 207 2 208 1.93e-117 350
MS.gene064632.t1 MTR_5g094390 66.387 119 31 2 430 544 172 285 3.36e-44 159
MS.gene064632.t1 MTR_0283s0050 73.232 198 53 0 10 207 7 204 1.77e-105 318
MS.gene064632.t1 MTR_0283s0050 67.442 86 23 1 444 529 186 266 1.13e-31 124
MS.gene064632.t1 MTR_5g097530 73.232 198 53 0 10 207 7 204 2.58e-105 318
MS.gene064632.t1 MTR_5g097530 67.593 108 30 1 444 551 186 288 1.48e-42 154
MS.gene064632.t1 MTR_5g094390 81.065 169 32 0 1 169 2 170 2.68e-98 297
MS.gene064632.t1 MTR_3g076650 62.887 194 71 1 2 195 3 195 3.05e-80 263
MS.gene064632.t1 MTR_3g076650 52.727 110 47 1 435 544 180 284 2.35e-21 98.2
MS.gene064632.t1 MTR_7g114680 58.081 198 82 1 10 207 8 204 5.21e-75 252
MS.gene064632.t1 MTR_7g114680 59.633 109 37 2 444 550 186 289 5.84e-30 125
MS.gene064632.t1 MTR_1g081330 58.586 198 81 1 10 207 8 204 4.83e-74 250
MS.gene064632.t1 MTR_1g081330 57.798 109 39 2 444 550 186 289 5.55e-29 122
MS.gene064632.t1 MTR_5g075220 56.853 197 85 0 11 207 12 208 7.16e-73 243
MS.gene064632.t1 MTR_5g075220 50.000 110 50 1 435 544 181 285 1.24e-24 108
MS.gene064632.t1 MTR_1g103850 59.391 197 77 3 11 207 10 203 1.16e-72 246
MS.gene064632.t1 MTR_1g103850 57.851 121 42 3 434 550 173 288 4.74e-31 128
MS.gene064632.t1 MTR_3g080960 58.824 187 76 1 9 195 3 188 1.29e-69 235
MS.gene064632.t1 MTR_3g080960 63.158 76 28 0 469 544 202 277 2.23e-23 104
MS.gene064632.t1 MTR_4g028830 58.889 180 74 0 16 195 14 193 2.44e-68 232
MS.gene064632.t1 MTR_4g028830 53.271 107 45 1 444 550 187 288 1.37e-20 95.9
MS.gene064632.t1 MTR_7g072860 56.250 192 84 0 16 207 18 209 3.15e-68 231
MS.gene064632.t1 MTR_7g072860 50.467 107 48 1 444 550 191 292 2.78e-27 116
MS.gene064632.t1 MTR_7g072640 56.250 192 84 0 16 207 18 209 3.15e-68 231
MS.gene064632.t1 MTR_7g072640 50.467 107 48 1 444 550 191 292 2.78e-27 116
MS.gene064632.t1 MTR_8g027265 59.890 182 72 1 14 195 26 206 7.72e-68 232
MS.gene064632.t1 MTR_8g027265 55.085 118 45 2 430 544 183 295 8.56e-25 109
MS.gene064632.t1 MTR_3g095680 54.000 200 88 2 8 207 18 213 6.54e-66 226
MS.gene064632.t1 MTR_3g095680 54.955 111 43 2 437 545 186 291 1.90e-28 120
MS.gene064632.t1 MTR_3g095680 54.000 200 88 2 8 207 50 245 1.27e-65 226
MS.gene064632.t1 MTR_3g095680 54.955 111 43 2 437 545 218 323 3.00e-28 120
MS.gene064632.t1 MTR_7g114680 57.222 180 76 1 28 207 12 190 1.72e-65 226
MS.gene064632.t1 MTR_7g114680 59.633 109 37 2 444 550 172 275 5.79e-30 125
MS.gene064632.t1 MTR_6g016260 58.824 170 70 0 26 195 6 175 2.74e-61 212
MS.gene064632.t1 MTR_6g016260 59.211 76 31 0 469 544 189 264 1.94e-20 95.5
MS.gene064632.t1 MTR_8g093090 50.000 200 96 2 8 207 18 213 2.85e-61 213
MS.gene064632.t1 MTR_8g093090 46.218 119 59 1 425 543 176 289 8.15e-27 115
MS.gene064632.t1 MTR_8g093090 50.000 200 96 2 8 207 36 231 4.73e-61 213
MS.gene064632.t1 MTR_8g093090 46.218 119 59 1 425 543 194 307 8.66e-27 115
MS.gene064632.t1 MTR_8g093090 51.515 132 63 1 76 207 1 131 5.88e-40 153
MS.gene064632.t1 MTR_8g093090 46.218 119 59 1 425 543 94 207 4.83e-27 115
MS.gene064632.t1 MTR_3g056013 90.541 74 7 0 484 557 8 81 7.48e-39 137
MS.gene064632.t1 MTR_1g081330 58.475 118 48 1 90 207 3 119 2.89e-38 149
MS.gene064632.t1 MTR_1g081330 57.798 109 39 2 444 550 101 204 3.31e-29 122
MS.gene064632.t1 MTR_5g049520 65.517 87 30 0 61 147 77 163 5.37e-32 121
MS.gene064632.t1 MTR_3g095680 54.955 111 43 2 437 545 42 147 5.46e-29 120
MS.gene064632.t1 MTR_3g095680 55.072 69 30 1 139 207 2 69 2.93e-17 85.1
MS.gene064632.t1 MTR_8g093090 46.218 119 59 1 425 543 32 145 2.83e-27 115
MS.gene064632.t1 MTR_8g093090 55.072 69 30 1 139 207 2 69 9.45e-18 86.7
MS.gene064632.t1 MTR_0068s0070 70.909 55 16 0 93 147 65 119 1.45e-22 93.6
MS.gene064632.t1 MTR_5g049560 46.018 113 32 2 59 171 179 262 1.62e-22 97.8
MS.gene064632.t1 MTR_8g098425 27.805 205 133 7 2 203 389 581 2.36e-16 83.2
MS.gene064632.t1 MTR_1g100250 27.885 208 135 6 2 206 392 587 2.66e-16 82.8
MS.gene064632.t1 MTR_4g075410 33.516 182 110 7 24 202 19 192 4.55e-16 82.4
MS.gene064632.t1 MTR_4g075410 33.516 182 110 7 24 202 19 192 4.72e-16 82.4
MS.gene064632.t1 MTR_4g074875 32.967 182 111 7 24 202 19 192 6.25e-16 82.0
MS.gene064632.t1 MTR_4g074875 32.967 182 111 7 24 202 19 192 6.48e-16 82.0
MS.gene064632.t1 MTR_1g105290 31.937 191 109 7 27 205 56 237 8.64e-16 80.9
MS.gene064632.t1 MTR_1g105290 31.937 191 109 7 27 205 56 237 1.02e-15 80.5
MS.gene064632.t1 MTR_1g105290 31.937 191 109 7 27 205 56 237 1.02e-15 80.9
MS.gene064632.t1 MTR_4g094415 32.948 173 106 7 31 201 168 332 1.76e-15 79.0
MS.gene064632.t1 MTR_4g094415 32.948 173 106 7 31 201 168 332 2.25e-15 79.3
MS.gene064632.t1 MTR_5g059880 33.333 177 101 8 30 201 196 360 5.34e-14 74.7
MS.gene064632.t1 MTR_5g059940 33.333 177 101 8 30 201 129 293 8.50e-14 73.9
MS.gene064632.t1 MTR_3g095620 29.480 173 114 4 32 202 31 197 1.34e-13 72.0
MS.gene064632.t1 MTR_5g060350 33.333 177 101 8 30 201 325 489 1.48e-13 73.9
MS.gene064632.t1 MTR_3g096230 26.289 194 134 6 16 205 233 421 2.12e-13 73.2
MS.gene064632.t1 MTR_3g096230 26.154 195 135 6 16 206 233 422 3.03e-13 72.8
MS.gene064632.t1 MTR_4g082325 31.792 173 111 5 18 189 135 301 3.76e-13 72.0
MS.gene064632.t1 MTR_5g097540 44.706 85 23 2 64 148 238 298 8.78e-13 69.7
MS.gene064632.t1 MTR_1g081790 31.844 179 107 8 30 203 693 861 1.65e-12 70.9
MS.gene064632.t1 MTR_5g066490 29.714 175 108 7 27 195 647 812 1.95e-12 70.5
MS.gene064632.t1 MTR_1g081790 31.844 179 107 8 30 203 693 861 2.19e-12 70.5
MS.gene064632.t1 MTR_8g093730 26.111 180 125 5 30 206 303 477 4.84e-12 69.3
MS.gene064632.t1 MTR_3g062420 57.143 56 23 1 142 197 1953 2007 8.16e-12 68.9
MS.gene064632.t1 MTR_5g059910 30.968 155 99 6 30 183 135 282 9.91e-12 67.4
MS.gene064632.t1 MTR_2g034020 30.337 178 111 7 30 203 470 638 1.23e-11 67.8
MS.gene064632.t1 MTR_7g072605 27.835 194 129 6 19 206 7 195 1.49e-11 67.0
MS.gene064632.t1 MTR_5g017890 27.374 179 115 7 30 202 376 545 2.26e-11 67.0
MS.gene064632.t1 MTR_4g036575 30.168 179 101 10 29 192 718 887 2.61e-11 67.0
MS.gene064632.t1 MTR_3g101210 28.571 203 124 9 2 193 279 471 2.81e-11 66.6
MS.gene064632.t1 MTR_3g101210 28.571 203 124 9 2 193 279 471 3.15e-11 66.6
MS.gene064632.t1 MTR_4g122160 28.409 176 117 6 30 203 464 632 4.71e-11 66.2
MS.gene064632.t1 MTR_1g113960 26.882 186 124 7 18 202 295 469 4.86e-11 65.9
MS.gene064632.t1 MTR_4g122160 28.409 176 117 6 30 203 464 632 4.90e-11 65.9
MS.gene064632.t1 MTR_1g113960 26.882 186 124 7 18 202 295 469 5.01e-11 65.9
MS.gene064632.t1 MTR_1g016300 29.444 180 110 8 30 203 667 835 5.64e-11 65.9
MS.gene064632.t1 MTR_6g082370 34.444 90 57 2 292 380 16 104 8.69e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064632.t1 AT5G55560 77.723 202 45 0 6 207 11 212 1.53e-114 343
MS.gene064632.t1 AT5G55560 59.836 122 40 2 430 547 176 292 1.35e-40 149
MS.gene064632.t1 AT3G48260 63.542 192 70 0 14 205 10 201 4.13e-80 261
MS.gene064632.t1 AT3G48260 50.909 110 49 1 435 544 176 280 1.85e-27 116
MS.gene064632.t1 AT3G04910 59.091 198 80 1 10 207 8 204 1.15e-75 253
MS.gene064632.t1 AT3G04910 58.716 109 38 2 444 550 186 289 8.94e-29 121
MS.gene064632.t1 AT5G28080 55.051 198 88 1 10 207 9 205 3.70e-73 241
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 187 282 2.13e-25 110
MS.gene064632.t1 AT3G51630 58.163 196 82 0 12 207 11 206 5.78e-73 243
MS.gene064632.t1 AT3G51630 53.636 110 44 2 444 553 188 290 1.08e-24 108
MS.gene064632.t1 AT3G51630 58.163 196 82 0 12 207 11 206 5.78e-73 243
MS.gene064632.t1 AT3G51630 53.636 110 44 2 444 553 188 290 1.08e-24 108
MS.gene064632.t1 AT3G22420 55.838 197 86 1 11 207 9 204 1.21e-72 242
MS.gene064632.t1 AT3G22420 50.893 112 48 2 437 546 177 283 8.97e-27 114
MS.gene064632.t1 AT3G22420 55.838 197 86 1 11 207 9 204 1.97e-72 243
MS.gene064632.t1 AT3G22420 50.893 112 48 2 437 546 177 283 1.05e-26 114
MS.gene064632.t1 AT3G22420 55.838 197 86 1 11 207 80 275 5.33e-72 242
MS.gene064632.t1 AT3G22420 50.000 116 51 2 437 550 248 358 1.07e-26 115
MS.gene064632.t1 AT3G22420 55.838 197 86 1 11 207 80 275 9.38e-72 242
MS.gene064632.t1 AT3G22420 50.000 116 51 2 437 550 248 358 1.24e-26 115
MS.gene064632.t1 AT5G58350 57.292 192 82 0 16 207 9 200 9.20e-71 238
MS.gene064632.t1 AT5G58350 49.505 101 46 1 444 544 182 277 1.13e-24 108
MS.gene064632.t1 AT3G22420 53.927 191 88 0 11 201 9 199 5.97e-69 233
MS.gene064632.t1 AT3G22420 52.885 104 44 1 443 546 217 315 2.41e-26 114
MS.gene064632.t1 AT3G22420 53.927 191 88 0 11 201 9 199 1.19e-68 233
MS.gene064632.t1 AT3G22420 52.885 104 44 1 443 546 217 315 2.64e-26 114
MS.gene064632.t1 AT5G41990 58.333 180 74 1 16 195 19 197 6.21e-68 229
MS.gene064632.t1 AT5G41990 63.158 76 28 0 469 544 211 286 4.31e-23 103
MS.gene064632.t1 AT1G49160 54.450 191 86 1 17 207 19 208 2.76e-67 228
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 181 286 2.84e-27 116
MS.gene064632.t1 AT3G18750 53.171 205 92 2 3 207 8 208 5.25e-67 227
MS.gene064632.t1 AT3G18750 53.636 110 44 2 437 544 181 285 1.27e-27 117
MS.gene064632.t1 AT3G18750 53.171 205 92 2 3 207 8 208 5.25e-67 227
MS.gene064632.t1 AT3G18750 53.636 110 44 2 437 544 181 285 1.27e-27 117
MS.gene064632.t1 AT3G18750 53.171 205 92 2 3 207 8 208 5.25e-67 227
MS.gene064632.t1 AT3G18750 53.636 110 44 2 437 544 181 285 1.27e-27 117
MS.gene064632.t1 AT1G64630 56.111 180 78 1 16 195 6 184 6.02e-64 218
MS.gene064632.t1 AT1G64630 64.474 76 27 0 469 544 198 273 4.15e-23 103
MS.gene064632.t1 AT3G18750 54.255 188 82 2 3 190 8 191 5.55e-62 212
MS.gene064632.t1 AT3G18750 54.255 188 82 2 3 190 8 191 5.55e-62 212
MS.gene064632.t1 AT3G04910 57.059 170 72 1 38 207 13 181 3.15e-61 214
MS.gene064632.t1 AT3G04910 58.716 109 38 2 444 550 163 266 1.08e-28 121
MS.gene064632.t1 AT3G18750 54.144 181 82 1 27 207 11 190 7.03e-61 211
MS.gene064632.t1 AT3G18750 53.636 110 44 2 437 544 163 267 1.02e-27 117
MS.gene064632.t1 AT1G49160 44.118 238 85 2 17 207 19 255 6.62e-59 204
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 228 333 6.41e-27 114
MS.gene064632.t1 AT1G49160 44.118 238 85 2 17 207 19 255 1.14e-58 206
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 228 333 5.79e-27 115
MS.gene064632.t1 AT1G49160 53.892 167 76 1 41 207 25 190 1.73e-56 198
MS.gene064632.t1 AT1G49160 56.863 102 39 1 444 545 172 268 1.97e-27 116
MS.gene064632.t1 AT5G28080 43.939 198 73 2 10 207 9 168 2.68e-49 177
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 150 245 1.53e-25 110
MS.gene064632.t1 AT3G48260 67.619 105 34 0 101 205 2 106 2.63e-42 157
MS.gene064632.t1 AT3G48260 54.455 101 41 1 444 544 90 185 8.49e-28 116
MS.gene064632.t1 AT5G28080 55.932 118 51 1 90 207 3 119 4.39e-39 148
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 101 196 9.26e-26 110
MS.gene064632.t1 AT5G28080 55.932 118 51 1 90 207 3 119 4.39e-39 148
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 101 196 9.26e-26 110
MS.gene064632.t1 AT5G28080 55.932 118 51 1 90 207 3 119 4.39e-39 148
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 101 196 9.26e-26 110
MS.gene064632.t1 AT5G28080 55.932 118 51 1 90 207 3 119 4.39e-39 148
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 101 196 9.26e-26 110
MS.gene064632.t1 AT5G28080 55.932 118 51 1 90 207 3 119 4.39e-39 148
MS.gene064632.t1 AT5G28080 55.446 101 40 1 444 544 101 196 9.26e-26 110
MS.gene064632.t1 AT3G04910 58.716 109 38 2 444 550 60 163 5.96e-29 121
MS.gene064632.t1 AT3G04910 63.291 79 28 1 129 207 1 78 2.28e-25 110
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 54 159 6.89e-28 116
MS.gene064632.t1 AT1G49160 53.659 82 37 1 126 207 1 81 2.13e-22 100
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 54 159 6.89e-28 116
MS.gene064632.t1 AT1G49160 53.659 82 37 1 126 207 1 81 2.13e-22 100
MS.gene064632.t1 AT1G49160 54.054 111 44 2 437 545 54 159 6.89e-28 116
MS.gene064632.t1 AT1G49160 53.659 82 37 1 126 207 1 81 2.13e-22 100
MS.gene064632.t1 AT5G28080 60.465 86 34 0 459 544 4 89 1.55e-25 107
MS.gene064632.t1 AT3G13530 32.967 182 111 7 24 202 19 192 2.40e-15 80.1
MS.gene064632.t1 AT2G30360 27.660 188 125 6 25 206 18 200 2.58e-15 79.0
MS.gene064632.t1 AT1G09000 30.769 182 114 6 27 201 70 246 3.70e-15 79.0
MS.gene064632.t1 AT1G09000 30.769 182 114 6 27 201 70 246 3.85e-15 79.0
MS.gene064632.t1 AT3G07980 32.418 182 112 7 24 202 19 192 5.20e-15 79.3
MS.gene064632.t1 AT3G07980 32.418 182 112 7 24 202 19 192 5.50e-15 79.0
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 7.49e-15 78.2
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 7.81e-15 77.8
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 7.95e-15 77.8
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 7.95e-15 77.8
MS.gene064632.t1 AT4G08500 32.044 181 110 7 30 205 337 509 8.16e-15 77.8
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 1.01e-14 77.4
MS.gene064632.t1 AT1G53570 28.866 194 125 7 18 205 205 391 1.02e-14 77.4
MS.gene064632.t1 AT1G54960 30.612 196 115 7 17 201 60 245 1.15e-14 77.4
MS.gene064632.t1 AT1G54960 30.612 196 115 7 17 201 60 245 1.15e-14 77.4
MS.gene064632.t1 AT1G63700 26.829 205 135 7 2 203 381 573 3.27e-14 76.3
MS.gene064632.t1 AT1G63700 26.829 205 135 7 2 203 381 573 3.27e-14 76.3
MS.gene064632.t1 AT3G20860 30.534 131 84 4 75 203 51 176 3.49e-14 75.1
MS.gene064632.t1 AT5G28290 32.331 133 84 4 73 203 49 177 4.50e-13 72.4
MS.gene064632.t1 AT5G28290 32.331 133 84 4 73 203 49 177 4.54e-13 72.4
MS.gene064632.t1 AT5G28290 32.331 133 84 4 73 203 49 177 4.54e-13 72.4
MS.gene064632.t1 AT4G08480 35.526 152 88 7 30 179 505 648 4.81e-13 72.4
MS.gene064632.t1 AT4G12020 31.461 178 112 7 30 205 1622 1791 5.14e-13 72.8
MS.gene064632.t1 AT4G12020 31.461 178 112 7 30 205 1630 1799 5.19e-13 72.8
MS.gene064632.t1 AT4G12020 31.461 178 112 7 30 205 1555 1724 5.96e-13 72.8
MS.gene064632.t1 AT4G12020 32.530 166 101 8 30 193 1622 1778 1.01e-12 72.0
MS.gene064632.t1 AT4G12020 32.530 166 101 8 30 193 1630 1786 1.11e-12 71.6
MS.gene064632.t1 AT1G14000 31.250 160 103 5 31 189 167 320 1.45e-12 70.1
MS.gene064632.t1 AT4G12020 32.680 153 93 7 30 180 1622 1766 2.70e-12 70.5
MS.gene064632.t1 AT4G12020 32.680 153 93 7 30 180 1622 1766 2.70e-12 70.5
MS.gene064632.t1 AT4G12020 32.680 153 93 7 30 180 1622 1766 3.47e-12 70.1
MS.gene064632.t1 AT5G11850 31.492 181 105 9 30 203 613 781 3.67e-12 69.7
MS.gene064632.t1 AT4G12020 32.680 153 93 7 30 180 1630 1774 3.82e-12 70.1
MS.gene064632.t1 AT4G12020 32.680 153 93 7 30 180 1630 1774 3.82e-12 70.1
MS.gene064632.t1 AT5G66850 26.554 177 119 6 30 202 350 519 2.40e-11 67.0
MS.gene064632.t1 AT5G66850 26.554 177 119 6 30 202 350 519 2.44e-11 67.0
MS.gene064632.t1 AT1G73690 30.323 155 95 5 30 181 15 159 6.10e-11 65.1

Find 107 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTATCTGTCTTGATTTC+TGG 0.116640 3.1:+42251870 None:intergenic
CATTCAGCGCATTCAGTTCT+AGG 0.181449 3.1:-42253656 MS.gene064632:CDS
ACATAAGCATGTTTCTATTA+AGG 0.226294 3.1:-42253936 MS.gene064632:CDS
TTCATTTAGCTCTTCAAATA+TGG 0.235075 3.1:+42252301 None:intergenic
AATTCATGTTGAGGGGAAAA+AGG 0.275872 3.1:+42252018 None:intergenic
GGCTGTAGCAATCATGTAAC+AGG 0.296416 3.1:-42252332 MS.gene064632:CDS
AGAGGTCATGGAAGGCATTC+TGG 0.302700 3.1:-42252626 MS.gene064632:CDS
TCATTGGACTTTACAGTGTT+TGG 0.315418 3.1:-42254036 MS.gene064632:CDS
TGGCTTTACTTACACCTTGC+TGG 0.319995 3.1:+42253076 None:intergenic
GTACCGATGATTCATATCTT+TGG 0.323754 3.1:-42251965 MS.gene064632:CDS
TATCTTTGGCATTTGAGATA+TGG 0.325404 3.1:-42251951 MS.gene064632:CDS
ATTATAATTTAACAAAATTC+CGG 0.337673 3.1:+42253629 None:intergenic
TGTTGGACAGATTATGAAAA+GGG 0.337975 3.1:-42252132 MS.gene064632:CDS
ACAATGTCACATTCACTATA+TGG 0.338285 3.1:+42249011 None:intergenic
GAGGAAGCGTTTCTTCGAAT+TGG 0.338857 3.1:+42253165 None:intergenic
GAAGTGGTCTAAGAAAATTT+TGG 0.349420 3.1:-42253906 MS.gene064632:CDS
ATGCCTTCCATGACCTCTAT+TGG 0.359210 3.1:+42252631 None:intergenic
ACTGATCCAACCGGAAGATA+TGG 0.362153 3.1:-42254241 MS.gene064632:CDS
AATGTATATTAGGTTAAGAT+TGG 0.380565 3.1:-42253713 MS.gene064632:intron
AGGAAGCGTTTCTTCGAATT+GGG 0.394793 3.1:+42253166 None:intergenic
ATGGTAGACATATACTCATT+TGG 0.414002 3.1:-42249068 MS.gene064632:CDS
GTGGGAATTTGAGGGAGTAT+AGG 0.417911 3.1:-42253964 MS.gene064632:CDS
AAATGTTTCTGAGTCTTTGT+CGG 0.423160 3.1:+42254270 None:intergenic
TGTTTGTTGCCTTGACTAGT+AGG 0.423714 3.1:+42252206 None:intergenic
CTTGGGTTTGGCAGCAATTG+TGG 0.423716 3.1:-42253687 MS.gene064632:CDS
TTCAAGCAAAGATGAATATC+CGG 0.425954 3.1:-42252706 MS.gene064632:CDS
TAAAGTCTTTCAATCATTGC+AGG 0.427551 3.1:+42254100 None:intergenic
TAAGATTGGTGACTTGGGTT+TGG 0.430424 3.1:-42253699 MS.gene064632:CDS
TATTCTTCTCATGTTGAACT+TGG 0.441697 3.1:-42252275 MS.gene064632:CDS
TCTTCCTTCTTGTCGCGAGT+TGG 0.441864 3.1:+42252679 None:intergenic
GGAAAACATGTTAAAATTGA+AGG 0.444175 3.1:-42252248 MS.gene064632:CDS
ATATACAAGAAGGTGACTTC+AGG 0.446476 3.1:-42248981 MS.gene064632:CDS
ACAGAGGAAGAGGAGGAGAA+AGG 0.448968 3.1:-42252601 MS.gene064632:CDS
CATGTTAAAATTGAAGGAAA+GGG 0.449986 3.1:-42252242 MS.gene064632:CDS
CGTGGACATCCTTCCAATAG+AGG 0.463267 3.1:-42252644 MS.gene064632:CDS
GTGAAATATTAGGAGAGTAA+TGG 0.464479 3.1:+42252168 None:intergenic
ATCGTATCTTCCATATCTTC+CGG 0.474219 3.1:+42254231 None:intergenic
GTGTTGGACAGATTATGAAA+AGG 0.478037 3.1:-42252133 MS.gene064632:CDS
TGAAGAGGATTACACAGAAA+TGG 0.479001 3.1:-42249087 MS.gene064632:CDS
TTAGGTTAAGATTGGTGACT+TGG 0.481009 3.1:-42253705 MS.gene064632:intron
AAACAGAAGAACATGGTTGT+TGG 0.486845 3.1:-42251897 MS.gene064632:CDS
TTGTACAAGTGGGAATTTGA+GGG 0.489551 3.1:-42253972 MS.gene064632:CDS
TCAGCAGAAGGTCTAGCCCT+TGG 0.491026 3.1:+42248885 None:intergenic
TCTCATGTTGAACTTGGTGA+TGG 0.491526 3.1:-42252269 MS.gene064632:CDS
CTATTAAGGCTTTGAAGAAG+TGG 0.492791 3.1:-42253922 MS.gene064632:CDS
TCACAAAATATGTTAAGTGT+TGG 0.497558 3.1:-42252149 MS.gene064632:CDS
AAGAAGGAATAGAAGTAGCA+TGG 0.500540 3.1:-42254156 MS.gene064632:CDS
TTTGTACAAGTGGGAATTTG+AGG 0.501885 3.1:-42253973 MS.gene064632:CDS
TTTGTTGAAACTGATCCAAC+CGG 0.503464 3.1:-42254250 MS.gene064632:CDS
GTTTCTGAGTCTTTGTCGGA+TGG 0.504770 3.1:+42254274 None:intergenic
GGAAGATACGATGAATTACT+TGG 0.505791 3.1:-42254220 MS.gene064632:CDS
CATTCTGGATACAGAGGAAG+AGG 0.506917 3.1:-42252611 MS.gene064632:CDS
AAAGCATTTGATAATGAAGA+AGG 0.507018 3.1:-42254172 MS.gene064632:CDS
CTCTCAAGATCTGTGGGATG+TGG 0.507837 3.1:-42253211 MS.gene064632:intron
TAGGTTAAGATTGGTGACTT+GGG 0.510496 3.1:-42253704 MS.gene064632:CDS
CTGAAATGAATTCATGTTGA+GGG 0.510878 3.1:+42252010 None:intergenic
CATCCTTCCAATAGAGGTCA+TGG 0.514136 3.1:-42252638 MS.gene064632:CDS
ACATGTTAAAATTGAAGGAA+AGG 0.517591 3.1:-42252243 MS.gene064632:CDS
ATCACCGAGGTTTGTACAAG+TGG 0.519419 3.1:-42253983 MS.gene064632:CDS
TACGATGAATTACTTGGAGC+TGG 0.524528 3.1:-42254214 MS.gene064632:CDS
TATCTTCCATATCTTCCGGT+TGG 0.526287 3.1:+42254235 None:intergenic
TTTATCTTGTTCAAGGATTG+CGG 0.530284 3.1:+42248951 None:intergenic
TTGGGTTTGGCAGCAATTGT+GGG 0.541619 3.1:-42253686 MS.gene064632:CDS
TTCTGCTGAGGAATTGCTAA+AGG 0.543607 3.1:-42248871 MS.gene064632:CDS
TGGAATGTTAGTATTAGAGA+TGG 0.547641 3.1:-42249048 MS.gene064632:CDS
ATGTTAAAATTGAAGGAAAG+GGG 0.550193 3.1:-42252241 MS.gene064632:CDS
ATTTATCTCTCAAGATCTGT+GGG 0.551562 3.1:-42253217 MS.gene064632:intron
TGTCAATGGAAATACTGGCC+AGG 0.553529 3.1:-42253813 MS.gene064632:intron
TATTTATCTCTCAAGATCTG+TGG 0.559864 3.1:-42253218 MS.gene064632:intron
ACAGATAATGCAGTTTGTGA+AGG 0.571653 3.1:-42251858 MS.gene064632:intron
AACTCGCGACAAGAAGGAAG+AGG 0.575338 3.1:-42252677 MS.gene064632:CDS
ATAGCAGTTCCTACTAGTCA+AGG 0.578008 3.1:-42252215 MS.gene064632:CDS
AAAAGTGTCTCGCTCAACCA+AGG 0.579858 3.1:-42248902 MS.gene064632:CDS
TTTAGCAATTCCTCAGCAGA+AGG 0.580675 3.1:+42248873 None:intergenic
AGTTCCAACTCGCGACAAGA+AGG 0.586837 3.1:-42252683 MS.gene064632:CDS
TGTTAAAATTGAAGGAAAGG+GGG 0.590478 3.1:-42252240 MS.gene064632:CDS
AGAGAAAGAGAATGAATACA+AGG 0.590619 3.1:-42253136 MS.gene064632:CDS
ATGCCAAAGATATGAATCAT+CGG 0.591444 3.1:+42251962 None:intergenic
GGAAGAGGGGACTCATTTCG+TGG 0.594228 3.1:-42252662 MS.gene064632:CDS
TCTGGATACAGAGGAAGAGG+AGG 0.594683 3.1:-42252608 MS.gene064632:CDS
CTTCCATGACCTCTATTGGA+AGG 0.595689 3.1:+42252635 None:intergenic
GTTGGACAGATTATGAAAAG+GGG 0.601650 3.1:-42252131 MS.gene064632:CDS
ACTCGCGACAAGAAGGAAGA+GGG 0.608915 3.1:-42252676 MS.gene064632:CDS
GGAAGGCATTCTGGATACAG+AGG 0.611151 3.1:-42252617 MS.gene064632:CDS
TATGGTCACTTGAACAACAA+AGG 0.614999 3.1:-42251933 MS.gene064632:CDS
GGCACCAGAGCTATATGAAG+AGG 0.616021 3.1:-42249102 MS.gene064632:intron
TGTTGCAAAGATATACAAGA+AGG 0.616108 3.1:-42248991 MS.gene064632:CDS
AAAGTCTTTCAATCATTGCA+GGG 0.617274 3.1:+42254101 None:intergenic
CTTGTCGCGAGTTGGAACTC+CGG 0.633246 3.1:+42252687 None:intergenic
CTGTGGGATGTGGTTGAAGA+CGG 0.633282 3.1:-42253201 MS.gene064632:CDS
AGGTCTCTATGAATGATACA+AGG 0.636667 3.1:+42253854 None:intergenic
ATTCTCTTTCTCTGCAATCG+AGG 0.641221 3.1:+42253146 None:intergenic
GCTGAAATGAATTCATGTTG+AGG 0.641447 3.1:+42252009 None:intergenic
AAAGTGTCTCGCTCAACCAA+GGG 0.644670 3.1:-42248901 MS.gene064632:CDS
TCACCGAGGTTTGTACAAGT+GGG 0.644778 3.1:-42253982 MS.gene064632:CDS
AGAGGAGGAGAAAGGATACG+AGG 0.647477 3.1:-42252593 MS.gene064632:intron
TGAAATGAATTCATGTTGAG+GGG 0.649232 3.1:+42252011 None:intergenic
CTTCCAATAGAGGTCATGGA+AGG 0.651365 3.1:-42252634 MS.gene064632:CDS
ATTCCCACTTGTACAAACCT+CGG 0.651475 3.1:+42253979 None:intergenic
TTACAGTGTTTGGAGAGACA+AGG 0.658084 3.1:-42254026 MS.gene064632:CDS
AAGGGCTAGACCTTCTGCTG+AGG 0.666215 3.1:-42248883 MS.gene064632:CDS
CACACTGAATTTCATCACCG+AGG 0.674109 3.1:-42253996 MS.gene064632:CDS
CTCGCGACAAGAAGGAAGAG+GGG 0.678739 3.1:-42252675 MS.gene064632:CDS
GCATTGAGAATCATCCAGCA+AGG 0.679103 3.1:-42253090 MS.gene064632:CDS
GCTCTTAAAACAGAAGAACA+TGG 0.681634 3.1:-42251904 MS.gene064632:CDS
GCATTCAGTTCTAGGCACAC+CGG 0.687251 3.1:-42253648 MS.gene064632:CDS
GCTGTAGCAATCATGTAACA+GGG 0.694929 3.1:-42252331 MS.gene064632:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTAAAAAAAAAAAAAA+AGG - chr3.1:42249768-42249787 MS.gene064632:intron 0.0%
!! ATTATAATTTAACAAAATTC+CGG + chr3.1:42249487-42249506 None:intergenic 10.0%
!! TAAAAAAAAAAAAAAAGGAA+TGG - chr3.1:42249773-42249792 MS.gene064632:intron 10.0%
!!! TATTTGTTTTAATGTATATT+AGG - chr3.1:42249390-42249409 MS.gene064632:intron 10.0%
!!! TTTTTTTTTTTTAATAAACC+AGG + chr3.1:42249766-42249785 None:intergenic 10.0%
!!! AACATATTTTGTGAAATATT+AGG + chr3.1:42250958-42250977 None:intergenic 15.0%
!!! AATTGTTCTATTTTTTCTTT+CGG + chr3.1:42251658-42251677 None:intergenic 15.0%
!! AATGTATATTAGGTTAAGAT+TGG - chr3.1:42249400-42249419 MS.gene064632:intron 20.0%
!! ATAAACTTCTAGATACATTA+AGG + chr3.1:42249535-42249554 None:intergenic 20.0%
!! ATGATTAATGATCAAAAATC+TGG - chr3.1:42250736-42250755 MS.gene064632:intron 20.0%
!! GAAAATTACAAATTAAGAGA+GGG - chr3.1:42253729-42253748 MS.gene064632:intron 20.0%
!! TGAAAATTACAAATTAAGAG+AGG - chr3.1:42253728-42253747 MS.gene064632:intron 20.0%
!! TTTACTTAAAAAGTTCAGAT+TGG - chr3.1:42252979-42252998 MS.gene064632:intron 20.0%
! AAAACGTGACAATTATGAAT+TGG + chr3.1:42253955-42253974 None:intergenic 25.0%
! AAAATAAATCCAAATCATCC+TGG + chr3.1:42251436-42251455 None:intergenic 25.0%
! AAATAGAACAATTGTTGAGA+TGG - chr3.1:42251665-42251684 MS.gene064632:intron 25.0%
! ACATGTTAAAATTGAAGGAA+AGG - chr3.1:42250870-42250889 MS.gene064632:intron 25.0%
! ACTCTACATCATCAAAAAAA+GGG + chr3.1:42254269-42254288 None:intergenic 25.0%
! AGAAGATGATGAAAGAATAA+AGG - chr3.1:42250666-42250685 MS.gene064632:intron 25.0%
! AGAGAAAAGTTTGATGAAAA+AGG - chr3.1:42251891-42251910 MS.gene064632:CDS 25.0%
! ATAACGTGACAATTATGAAT+TGG + chr3.1:42249696-42249715 None:intergenic 25.0%
! ATCAAAAATCTGGTGAAATA+TGG - chr3.1:42250746-42250765 MS.gene064632:intron 25.0%
! ATGAGAAACAAAAACATCAT+TGG - chr3.1:42249061-42249080 MS.gene064632:CDS 25.0%
! ATGTTAAAATTGAAGGAAAG+GGG - chr3.1:42250872-42250891 MS.gene064632:intron 25.0%
! CATGTTAAAATTGAAGGAAA+GGG - chr3.1:42250871-42250890 MS.gene064632:intron 25.0%
! GAAGATGATGAAAGAATAAA+GGG - chr3.1:42250667-42250686 MS.gene064632:intron 25.0%
! GAATATTAAATGTCATTCTC+TGG + chr3.1:42249575-42249594 None:intergenic 25.0%
! GAATGACATTTAATATTCCT+AGG - chr3.1:42249577-42249596 MS.gene064632:intron 25.0%
! GGAAAACATGTTAAAATTGA+AGG - chr3.1:42250865-42250884 MS.gene064632:intron 25.0%
! GGAAATCAAATTAAAAGTTG+TGG - chr3.1:42250242-42250261 MS.gene064632:intron 25.0%
! GGATTAATGAAATACTTTCT+TGG - chr3.1:42252896-42252915 MS.gene064632:intron 25.0%
! TACTCTACATCATCAAAAAA+AGG + chr3.1:42254270-42254289 None:intergenic 25.0%
! TCACAAAATATGTTAAGTGT+TGG - chr3.1:42250964-42250983 MS.gene064632:intron 25.0%
! TCTTTGCAATAATTGAGAAA+CGG + chr3.1:42251579-42251598 None:intergenic 25.0%
! TTCTTTACACCAAATATTCT+AGG + chr3.1:42250068-42250087 None:intergenic 25.0%
!! AATCAAATTCCAGTTTTCAA+TGG - chr3.1:42249834-42249853 MS.gene064632:intron 25.0%
!! ACAACATGTTCAAATTTTTG+TGG + chr3.1:42250317-42250336 None:intergenic 25.0%
!! ACATAAGCATGTTTCTATTA+AGG - chr3.1:42249177-42249196 MS.gene064632:intron 25.0%
!! GAGATTTTTGACAAAAAATC+AGG - chr3.1:42251036-42251055 MS.gene064632:intron 25.0%
!! TACATCTTTTATCTTGTTCA+AGG + chr3.1:42254172-42254191 None:intergenic 25.0%
!! TATAAAAGAAGAAGTATGGA+GGG - chr3.1:42252244-42252263 MS.gene064632:CDS 25.0%
!! TCATTGCTAAGTTTTCAAAT+TGG + chr3.1:42250175-42250194 None:intergenic 25.0%
!! TTGTAATTTTCCATTATCCT+AGG - chr3.1:42249507-42249526 MS.gene064632:intron 25.0%
!!! AAAGCATTTGATAATGAAGA+AGG - chr3.1:42248941-42248960 MS.gene064632:CDS 25.0%
!!! ACCAAATATTCTAGGATAAA+TGG + chr3.1:42250060-42250079 None:intergenic 25.0%
!!! GAAATATGGTTTTTAGATAG+TGG - chr3.1:42250760-42250779 MS.gene064632:intron 25.0%
!!! GTTGATGATTTAATTTATGC+AGG - chr3.1:42252806-42252825 MS.gene064632:intron 25.0%
!!! TAATGTTACATTTTTTGCAC+AGG - chr3.1:42252199-42252218 MS.gene064632:CDS 25.0%
!!! TAGAATATTTGGTGTAAAGA+AGG - chr3.1:42250067-42250086 MS.gene064632:intron 25.0%
!!! TTCATTTAGCTCTTCAAATA+TGG + chr3.1:42250815-42250834 None:intergenic 25.0%
AAAAGTCTATAAGCTACACA+AGG - chr3.1:42252637-42252656 MS.gene064632:CDS 30.0%
AAACTCAGTTGCATTATCTT+CGG - chr3.1:42253393-42253412 MS.gene064632:intron 30.0%
AAAGTCTTTCAATCATTGCA+GGG + chr3.1:42249015-42249034 None:intergenic 30.0%
AATTAGAACTGTTCTTGCTT+TGG - chr3.1:42252493-42252512 MS.gene064632:intron 30.0%
ACAATGTCACATTCACTATA+TGG + chr3.1:42254105-42254124 None:intergenic 30.0%
ACATCTTGAGATAAACAACA+TGG + chr3.1:42249356-42249375 None:intergenic 30.0%
AGAGAAAGAGAATGAATACA+AGG - chr3.1:42249977-42249996 MS.gene064632:intron 30.0%
AGATCCTAGACAAAAAACAT+AGG + chr3.1:42253344-42253363 None:intergenic 30.0%
AGGCTATAAAAGAAGAAGTA+TGG - chr3.1:42252240-42252259 MS.gene064632:CDS 30.0%
AGTCTCATTAAAATCTACAC+CGG + chr3.1:42252447-42252466 None:intergenic 30.0%
ATAAAGTTGCAGTCTTTATG+GGG - chr3.1:42250149-42250168 MS.gene064632:intron 30.0%
ATGCCAAAGATATGAATCAT+CGG + chr3.1:42251154-42251173 None:intergenic 30.0%
ATGGTAGACATATACTCATT+TGG - chr3.1:42254045-42254064 MS.gene064632:CDS 30.0%
ATTCAAGTGAAGCAAACAAA+AGG - chr3.1:42252920-42252939 MS.gene064632:intron 30.0%
ATTTATCTCTCAAGATCTGT+GGG - chr3.1:42249896-42249915 MS.gene064632:intron 30.0%
CATAAAGTTGCAGTCTTTAT+GGG - chr3.1:42250148-42250167 MS.gene064632:intron 30.0%
CTATAAGACCAAGTATAATG+AGG - chr3.1:42252364-42252383 MS.gene064632:intron 30.0%
CTATGCATCAATATAACTAG+AGG - chr3.1:42249626-42249645 MS.gene064632:intron 30.0%
CTCAATTATTGCAAAGAACA+AGG - chr3.1:42251582-42251601 MS.gene064632:intron 30.0%
CTCTTTCTCCAACAAATTTA+TGG - chr3.1:42253990-42254009 MS.gene064632:CDS 30.0%
CTGAAATGAATTCATGTTGA+GGG + chr3.1:42251106-42251125 None:intergenic 30.0%
GAAAACTTAGCAATGAAAGA+AGG - chr3.1:42250179-42250198 MS.gene064632:intron 30.0%
GATGCTTACTTTCTACAAAA+TGG - chr3.1:42252707-42252726 MS.gene064632:CDS 30.0%
GCCATTTATCCTAGAATATT+TGG - chr3.1:42250056-42250075 MS.gene064632:intron 30.0%
GGATATAGTGATGAATCAAA+AGG - chr3.1:42251933-42251952 MS.gene064632:CDS 30.0%
GTGAAATATTAGGAGAGTAA+TGG + chr3.1:42250948-42250967 None:intergenic 30.0%
GTGATGAATCAAAAGGATAT+CGG - chr3.1:42251940-42251959 MS.gene064632:CDS 30.0%
TAAAGTCTTTCAATCATTGC+AGG + chr3.1:42249016-42249035 None:intergenic 30.0%
TATAGTGCATTCAGTTAGTT+TGG - chr3.1:42253138-42253157 MS.gene064632:CDS 30.0%
TATTCTTCTCATGTTGAACT+TGG - chr3.1:42250838-42250857 MS.gene064632:intron 30.0%
TATTTATCTCTCAAGATCTG+TGG - chr3.1:42249895-42249914 MS.gene064632:intron 30.0%
TGAAACAGAAATAATGTACC+TGG + chr3.1:42249321-42249340 None:intergenic 30.0%
TGAAATGAATTCATGTTGAG+GGG + chr3.1:42251105-42251124 None:intergenic 30.0%
TGATTACTGGAATTCTCAAA+TGG - chr3.1:42249866-42249885 MS.gene064632:intron 30.0%
TGATTCAAGAATTTCTTGCA+AGG + chr3.1:42252177-42252196 None:intergenic 30.0%
TGCTGTTATTGAAGAAACAA+AGG - chr3.1:42250337-42250356 MS.gene064632:intron 30.0%
TGGAATGTTAGTATTAGAGA+TGG - chr3.1:42254065-42254084 MS.gene064632:CDS 30.0%
TGTTAAAATTGAAGGAAAGG+GGG - chr3.1:42250873-42250892 MS.gene064632:intron 30.0%
TGTTGCAAAGATATACAAGA+AGG - chr3.1:42254122-42254141 MS.gene064632:CDS 30.0%
TGTTGGACAGATTATGAAAA+GGG - chr3.1:42250981-42251000 MS.gene064632:intron 30.0%
TTCAAGCAAAGATGAATATC+CGG - chr3.1:42250407-42250426 MS.gene064632:intron 30.0%
TTGTATCTATTCACTTTGTG+AGG + chr3.1:42250364-42250383 None:intergenic 30.0%
TTTATCTTGTTCAAGGATTG+CGG + chr3.1:42254165-42254184 None:intergenic 30.0%
! AAATGTTTCTGAGTCTTTGT+CGG + chr3.1:42248846-42248865 None:intergenic 30.0%
! AACTTTTCTCTATTTTGTGC+AGG + chr3.1:42251882-42251901 None:intergenic 30.0%
! AAGAGCTTCCAAATAGTTTT+TGG - chr3.1:42251709-42251728 MS.gene064632:intron 30.0%
! AGAGCTTCCAAATAGTTTTT+GGG - chr3.1:42251710-42251729 MS.gene064632:intron 30.0%
! CATGTTCAAATTTTTGTGGA+AGG + chr3.1:42250313-42250332 None:intergenic 30.0%
! CTATAAAAGAAGAAGTATGG+AGG - chr3.1:42252243-42252262 MS.gene064632:CDS 30.0%
! GAAGTGGTCTAAGAAAATTT+TGG - chr3.1:42249207-42249226 MS.gene064632:intron 30.0%
! GTAAGTCAACTTAAAGTGTT+TGG - chr3.1:42251834-42251853 MS.gene064632:intron 30.0%
! GTTTTTGTCAATGGAAATAC+TGG - chr3.1:42249295-42249314 MS.gene064632:intron 30.0%
! TAGGATCTAAAGCTATTTCA+TGG - chr3.1:42253356-42253375 MS.gene064632:intron 30.0%
! TATCTTTGGCATTTGAGATA+TGG - chr3.1:42251162-42251181 MS.gene064632:intron 30.0%
! TGGTCTAAGAAAATTTTGGA+AGG - chr3.1:42249211-42249230 MS.gene064632:intron 30.0%
!! CATAAATTTGTTGGAGAAAG+AGG + chr3.1:42253992-42254011 None:intergenic 30.0%
!! GGTCTAAGAAAATTTTGGAA+GGG - chr3.1:42249212-42249231 MS.gene064632:intron 30.0%
!! TACCTTTTATTTCCAAGAGA+TGG + chr3.1:42251387-42251406 None:intergenic 30.0%
!! TGCAGTAATGTTTTTGTCAA+TGG - chr3.1:42249286-42249305 MS.gene064632:intron 30.0%
!! TGCCTTATTTGCAAAAAATC+TGG - chr3.1:42250559-42250578 MS.gene064632:intron 30.0%
!! TGCTTTAAAATGCAAGAACT+TGG + chr3.1:42251484-42251503 None:intergenic 30.0%
!! TTCTAGTTCTTCATTCAAGA+AGG + chr3.1:42252564-42252583 None:intergenic 30.0%
!!! GGTGAAAAGCTTATTTTTGT+TGG - chr3.1:42251912-42251931 MS.gene064632:CDS 30.0%
!!! GTCCAGATTTTTTGCAAATA+AGG + chr3.1:42250564-42250583 None:intergenic 30.0%
AAAATACAAGGCACGTTTAG+TGG - chr3.1:42252400-42252419 MS.gene064632:intron 35.0%
AAACAGAAGAACATGGTTGT+TGG - chr3.1:42251216-42251235 MS.gene064632:intron 35.0%
AAGAAGGAATAGAAGTAGCA+TGG - chr3.1:42248957-42248976 MS.gene064632:CDS 35.0%
AAGACCAAGTATAATGAGGA+TGG - chr3.1:42252368-42252387 MS.gene064632:intron 35.0%
AATTCATGTTGAGGGGAAAA+AGG + chr3.1:42251098-42251117 None:intergenic 35.0%
ACAATCTCTACTTGAATGGT+TGG + chr3.1:42250632-42250651 None:intergenic 35.0%
ACAGATAATGCAGTTTGTGA+AGG - chr3.1:42251255-42251274 MS.gene064632:intron 35.0%
ACATTCGTGATATGGTTCAA+AGG - chr3.1:42253605-42253624 MS.gene064632:intron 35.0%
ACCATTCAAGTAGAGATTGT+TGG - chr3.1:42250632-42250651 MS.gene064632:intron 35.0%
ACTTCCATCCTCATTATACT+TGG + chr3.1:42252375-42252394 None:intergenic 35.0%
AGAAGTTCCAGAAAAGAAAG+TGG - chr3.1:42250268-42250287 MS.gene064632:intron 35.0%
AGAGGTTCTATGTATTGTCA+AGG - chr3.1:42249644-42249663 MS.gene064632:intron 35.0%
AGATGTTGTGAAAACACCTT+TGG - chr3.1:42252046-42252065 MS.gene064632:CDS 35.0%
AGGTCTCTATGAATGATACA+AGG + chr3.1:42249262-42249281 None:intergenic 35.0%
ATAGCCTCTTCAAAACATTG+TGG + chr3.1:42252227-42252246 None:intergenic 35.0%
ATATACAAGAAGGTGACTTC+AGG - chr3.1:42254132-42254151 MS.gene064632:CDS 35.0%
ATCGTATCTTCCATATCTTC+CGG + chr3.1:42248885-42248904 None:intergenic 35.0%
ATGGTGAACACTATGATTAC+TGG - chr3.1:42249853-42249872 MS.gene064632:intron 35.0%
CAAAAACATTACTGCAGTTG+AGG + chr3.1:42249282-42249301 None:intergenic 35.0%
CAAGAATTTCTTGCAAGGAA+CGG + chr3.1:42252172-42252191 None:intergenic 35.0%
CAATCTCTACTTGAATGGTT+GGG + chr3.1:42250631-42250650 None:intergenic 35.0%
CATTAAGGAACCTAGGATAA+TGG + chr3.1:42249520-42249539 None:intergenic 35.0%
CCAAAAGGAAAAGATGCAAT+TGG - chr3.1:42252329-42252348 MS.gene064632:CDS 35.0%
CCATAAAGACTGCAACTTTA+TGG + chr3.1:42250150-42250169 None:intergenic 35.0%
CCATAAAGTTGCAGTCTTTA+TGG - chr3.1:42250147-42250166 MS.gene064632:intron 35.0%
CTAACTGAATGCACTATATC+CGG + chr3.1:42253136-42253155 None:intergenic 35.0%
CTAGATACATTAAGGAACCT+AGG + chr3.1:42249527-42249546 None:intergenic 35.0%
CTCCATCTCTTGGAAATAAA+AGG - chr3.1:42251382-42251401 MS.gene064632:intron 35.0%
CTTAGAATACATCAAGACCA+CGG - chr3.1:42253639-42253658 MS.gene064632:intron 35.0%
GAATATGAGATGACAGATCT+TGG - chr3.1:42252875-42252894 MS.gene064632:intron 35.0%
GCATTATCTGTCTTGATTTC+TGG + chr3.1:42251246-42251265 None:intergenic 35.0%
GCATTGAAAAGAATCGTACT+TGG - chr3.1:42252291-42252310 MS.gene064632:CDS 35.0%
GCTCTTAAAACAGAAGAACA+TGG - chr3.1:42251209-42251228 MS.gene064632:intron 35.0%
GCTGAAATGAATTCATGTTG+AGG + chr3.1:42251107-42251126 None:intergenic 35.0%
GCTTGAAAAACATTCTCCAA+TGG + chr3.1:42250394-42250413 None:intergenic 35.0%
GGAAGATACGATGAATTACT+TGG - chr3.1:42248893-42248912 MS.gene064632:CDS 35.0%
GTAAATAAGTGAATGCACCT+AGG + chr3.1:42249597-42249616 None:intergenic 35.0%
GTCTCATTAAAATCTACACC+GGG + chr3.1:42252446-42252465 None:intergenic 35.0%
GTGTTGGACAGATTATGAAA+AGG - chr3.1:42250980-42250999 MS.gene064632:intron 35.0%
GTTGGACAGATTATGAAAAG+GGG - chr3.1:42250982-42251001 MS.gene064632:intron 35.0%
GTTTGTGAAGGTTGCATATA+CGG - chr3.1:42251267-42251286 MS.gene064632:intron 35.0%
TAATCCTCTTCATATAGCTC+TGG + chr3.1:42254018-42254037 None:intergenic 35.0%
TAGATACAACAATCAGCCAT+TGG - chr3.1:42250375-42250394 MS.gene064632:intron 35.0%
TAGTGTTCACCATTGAAAAC+TGG + chr3.1:42249846-42249865 None:intergenic 35.0%
TATGGTCACTTGAACAACAA+AGG - chr3.1:42251180-42251199 MS.gene064632:intron 35.0%
TCACAACTACATTCGTGATA+TGG - chr3.1:42253597-42253616 MS.gene064632:intron 35.0%
TCATTGGACTTTACAGTGTT+TGG - chr3.1:42249077-42249096 MS.gene064632:CDS 35.0%
TCCATGAAAAACTGGATTCT+TGG + chr3.1:42253554-42253573 None:intergenic 35.0%
TCTATGTATTGTCAAGGCAT+TGG - chr3.1:42249650-42249669 MS.gene064632:intron 35.0%
TCTCTGTATGTGAAAAGAAG+TGG - chr3.1:42252755-42252774 MS.gene064632:intron 35.0%
TGAAGAGGATTACACAGAAA+TGG - chr3.1:42254026-42254045 MS.gene064632:CDS 35.0%
TGCAGGAACAAATCATGATA+TGG - chr3.1:42252823-42252842 MS.gene064632:intron 35.0%
TGGACATTGAAATTGCTGAT+TGG + chr3.1:42253534-42253553 None:intergenic 35.0%
TTCCATTTCCAAAAACAGCA+TGG - chr3.1:42251304-42251323 MS.gene064632:intron 35.0%
TTGAGGGGAAAAAGGTTATT+AGG + chr3.1:42251090-42251109 None:intergenic 35.0%
TTGTACAAGTGGGAATTTGA+GGG - chr3.1:42249141-42249160 MS.gene064632:intron 35.0%
TTGTCACAGAAAATAGGAGT+TGG + chr3.1:42253511-42253530 None:intergenic 35.0%
TTTGACCTTCCATGAAAAAC+TGG + chr3.1:42253562-42253581 None:intergenic 35.0%
TTTGTACAAGTGGGAATTTG+AGG - chr3.1:42249140-42249159 MS.gene064632:intron 35.0%
TTTGTTGAAACTGATCCAAC+CGG - chr3.1:42248863-42248882 MS.gene064632:CDS 35.0%
! AACTTTTCATTCAAGGCCAT+TGG + chr3.1:42253028-42253047 None:intergenic 35.0%
! AAGTGGTGCTAATTTCTTGA+TGG - chr3.1:42252772-42252791 MS.gene064632:intron 35.0%
! ACTTTTCATTCAAGGCCATT+GGG + chr3.1:42253027-42253046 None:intergenic 35.0%
! AGAATCCAGTTTTTCATGGA+AGG - chr3.1:42253554-42253573 MS.gene064632:intron 35.0%
! ATGGCTAGAAGCATGTTAAA+AGG - chr3.1:42251684-42251703 MS.gene064632:intron 35.0%
! ATTCTAAAGACGGAGTTTCA+AGG - chr3.1:42250107-42250126 MS.gene064632:intron 35.0%
! CCAATTGCATCTTTTCCTTT+TGG + chr3.1:42252332-42252351 None:intergenic 35.0%
! CTTCTTTTCACATACAGAGA+TGG + chr3.1:42252755-42252774 None:intergenic 35.0%
! GATTGGTTGTCACAGAAAAT+AGG + chr3.1:42253517-42253536 None:intergenic 35.0%
! GCACTTGTTGAAAATCAAAG+TGG - chr3.1:42251501-42251520 MS.gene064632:intron 35.0%
! GTACCGATGATTCATATCTT+TGG - chr3.1:42251148-42251167 MS.gene064632:intron 35.0%
! TAGGTTAAGATTGGTGACTT+GGG - chr3.1:42249409-42249428 MS.gene064632:intron 35.0%
! TCCAAGAATCCAGTTTTTCA+TGG - chr3.1:42253550-42253569 MS.gene064632:intron 35.0%
! TGGAAGTGTGCAAAAATACA+AGG - chr3.1:42252388-42252407 MS.gene064632:intron 35.0%
! TTAGGTTAAGATTGGTGACT+TGG - chr3.1:42249408-42249427 MS.gene064632:intron 35.0%
! TTCATTTTGCAGCAGCAAAA+AGG - chr3.1:42253191-42253210 MS.gene064632:CDS 35.0%
! TTCTCAACCACTTTCTTTTC+TGG + chr3.1:42250278-42250297 None:intergenic 35.0%
! TTTGAAGTTGAAGGAAAGGA+AGG - chr3.1:42252614-42252633 MS.gene064632:CDS 35.0%
!! AAGATGCAATTGGTTTGAAG+TGG - chr3.1:42252339-42252358 MS.gene064632:CDS 35.0%
!! ACTTTAAGTTGACTTACGAC+TGG + chr3.1:42251831-42251850 None:intergenic 35.0%
!! AGATGCAATTGGTTTGAAGT+GGG - chr3.1:42252340-42252359 MS.gene064632:CDS 35.0%
!! CTATTAAGGCTTTGAAGAAG+TGG - chr3.1:42249191-42249210 MS.gene064632:intron 35.0%
!! GATGGATTTTGTTGAACACT+TGG + chr3.1:42248824-42248843 None:intergenic 35.0%
!! TTCTCTAGAGTAACTGAGAT+TGG - chr3.1:42250221-42250240 MS.gene064632:intron 35.0%
!! TTTGATTGACTTGCAGCAAA+AGG - chr3.1:42253477-42253496 MS.gene064632:intron 35.0%
!! TTTTTGATGAAAGTGCAGCA+TGG - chr3.1:42252009-42252028 MS.gene064632:CDS 35.0%
!!! AGGTTTTGAAGTTGAAGGAA+AGG - chr3.1:42252610-42252629 MS.gene064632:CDS 35.0%
!!! TCAGCCTATGTTTTTTGTCT+AGG - chr3.1:42253337-42253356 MS.gene064632:intron 35.0%
AAGACTCTTAGAACCGATAG+AGG - chr3.1:42251534-42251553 MS.gene064632:intron 40.0%
AAGCTACACAAGGCTCTTTA+CGG - chr3.1:42252647-42252666 MS.gene064632:CDS 40.0%
AATTGTCTCCATGCGTACAA+CGG + chr3.1:42252477-42252496 None:intergenic 40.0%
ACATACAGAGATGGTTCAGA+TGG + chr3.1:42252746-42252765 None:intergenic 40.0%
ACCAAAACTGTTGGAGAAAG+AGG + chr3.1:42249733-42249752 None:intergenic 40.0%
AGACACACACCACAACAAAA+TGG - chr3.1:42251627-42251646 MS.gene064632:intron 40.0%
ATAATGTTGCTGAACCATCG+AGG - chr3.1:42252096-42252115 MS.gene064632:CDS 40.0%
ATAGCAGTTCCTACTAGTCA+AGG - chr3.1:42250898-42250917 MS.gene064632:intron 40.0%
ATGACTACACCAGGATGATT+TGG - chr3.1:42251424-42251443 MS.gene064632:intron 40.0%
ATTCCCACTTGTACAAACCT+CGG + chr3.1:42249137-42249156 None:intergenic 40.0%
ATTCTCTTTCTCTGCAATCG+AGG + chr3.1:42249970-42249989 None:intergenic 40.0%
CAGCTAGTAGATCTTCCAAA+AGG - chr3.1:42252314-42252333 MS.gene064632:CDS 40.0%
CCCTCTTGAACTAGTACATT+CGG - chr3.1:42251338-42251357 MS.gene064632:intron 40.0%
CCGAATGTACTAGTTCAAGA+GGG + chr3.1:42251341-42251360 None:intergenic 40.0%
CCTTCAACTTCAAAACCTTG+TGG + chr3.1:42252608-42252627 None:intergenic 40.0%
CGAATGTACTAGTTCAAGAG+GGG + chr3.1:42251340-42251359 None:intergenic 40.0%
CTAGTACATTCGGACATTTG+TGG - chr3.1:42251348-42251367 MS.gene064632:intron 40.0%
GAAAAGTTGCAGCTGAATGA+TGG - chr3.1:42253040-42253059 MS.gene064632:intron 40.0%
GAACTGTTCAAGCTTCTCAA+TGG + chr3.1:42253698-42253717 None:intergenic 40.0%
GAAGGAAGAAAACAACGAGT+TGG - chr3.1:42253261-42253280 MS.gene064632:intron 40.0%
GATAAATTCGCCTCCTCTAT+CGG + chr3.1:42251550-42251569 None:intergenic 40.0%
GATGGTTCAGCAACATTATG+AGG + chr3.1:42252095-42252114 None:intergenic 40.0%
GCCAACAATCTCTACTTGAA+TGG + chr3.1:42250636-42250655 None:intergenic 40.0%
GCTGCAAAATGAAGCTTACT+CGG + chr3.1:42253184-42253203 None:intergenic 40.0%
GCTGTAGCAATCATGTAACA+GGG - chr3.1:42250782-42250801 MS.gene064632:intron 40.0%
GCTTCAGCCCAAAAACTATT+TGG + chr3.1:42251720-42251739 None:intergenic 40.0%
GCTTGGTATCAAGTATGTGA+AGG - chr3.1:42253243-42253262 MS.gene064632:intron 40.0%
GGTGATTGCTTGAATTCAAC+AGG + chr3.1:42252074-42252093 None:intergenic 40.0%
GTTGGAGAAAGAGGAAGAAA+AGG + chr3.1:42249724-42249743 None:intergenic 40.0%
TACGATGAATTACTTGGAGC+TGG - chr3.1:42248899-42248918 MS.gene064632:CDS 40.0%
TAGAATATCCCACGCATCTT+TGG + chr3.1:42250093-42250112 None:intergenic 40.0%
TATCTTCCATATCTTCCGGT+TGG + chr3.1:42248881-42248900 None:intergenic 40.0%
TCCGAATGTACTAGTTCAAG+AGG + chr3.1:42251342-42251361 None:intergenic 40.0%
TCGTGATATGGTTCAAAGGA+AGG - chr3.1:42253609-42253628 MS.gene064632:intron 40.0%
TGATATGGTGCAGTCATTCA+AGG - chr3.1:42252838-42252857 MS.gene064632:intron 40.0%
TTACAGTGTTTGGAGAGACA+AGG - chr3.1:42249087-42249106 MS.gene064632:CDS 40.0%
TTCTGCTGAGGAATTGCTAA+AGG - chr3.1:42254242-42254261 MS.gene064632:CDS 40.0%
TTGAATTCAACAGGCACCAA+AGG + chr3.1:42252065-42252084 None:intergenic 40.0%
TTTAATAAACCAGGCTGCTC+TGG + chr3.1:42249757-42249776 None:intergenic 40.0%
TTTAGCAATTCCTCAGCAGA+AGG + chr3.1:42254243-42254262 None:intergenic 40.0%
! AAAGTCTACAGAAGCCTTGT+TGG - chr3.1:42253082-42253101 MS.gene064632:intron 40.0%
! AAGGAACGGAATTTTCTTGG+TGG + chr3.1:42252158-42252177 None:intergenic 40.0%
! ACAAGGCTTCTGTAGACTTT+TGG + chr3.1:42253082-42253101 None:intergenic 40.0%
! ATGAAAGTGCAGCATGGAAA+TGG - chr3.1:42252015-42252034 MS.gene064632:CDS 40.0%
! ATTACGAGCTGACTAGTTGT+TGG + chr3.1:42251975-42251994 None:intergenic 40.0%
! CAGCTGCAACTTTTCATTCA+AGG + chr3.1:42253035-42253054 None:intergenic 40.0%
! CTTTTACTGCTAAATGCAGC+AGG + chr3.1:42251129-42251148 None:intergenic 40.0%
! CTTTTCATTCAAGGCCATTG+GGG + chr3.1:42253026-42253045 None:intergenic 40.0%
! GCTTTTCATTTCCACATCCA+TGG + chr3.1:42252273-42252292 None:intergenic 40.0%
! TAAGATTGGTGACTTGGGTT+TGG - chr3.1:42249414-42249433 MS.gene064632:intron 40.0%
! TCCTCTTTCTCCAACAGTTT+TGG - chr3.1:42249729-42249748 MS.gene064632:intron 40.0%
! TCGAGATAGAACTCCTTTTG+AGG - chr3.1:42251788-42251807 MS.gene064632:intron 40.0%
! TCTCATGTTGAACTTGGTGA+TGG - chr3.1:42250844-42250863 MS.gene064632:intron 40.0%
! TGAAAGTGCAGCATGGAAAT+GGG - chr3.1:42252016-42252035 MS.gene064632:CDS 40.0%
! TGCAAGGAACGGAATTTTCT+TGG + chr3.1:42252161-42252180 None:intergenic 40.0%
! TGCGTGGGATATTCTAAAGA+CGG - chr3.1:42250097-42250116 MS.gene064632:intron 40.0%
! TGTTTGTTGCCTTGACTAGT+AGG + chr3.1:42250910-42250929 None:intergenic 40.0%
!! AGGAAGCGTTTCTTCGAATT+GGG + chr3.1:42249950-42249969 None:intergenic 40.0%
!! CTCTGGTGCCATAAATTTGT+TGG + chr3.1:42254001-42254020 None:intergenic 40.0%
!! GAAGAAAACAACGAGTTGGT+TGG - chr3.1:42253265-42253284 MS.gene064632:intron 40.0%
!! TCTTTGTTGATGACTACACC+AGG - chr3.1:42251415-42251434 MS.gene064632:intron 40.0%
!!! ATAGAACTCCTTTTGAGGCA+TGG - chr3.1:42251793-42251812 MS.gene064632:intron 40.0%
!!! ATTTTGCTGTTCCATGCTCT+CGG + chr3.1:42252686-42252705 None:intergenic 40.0%
!!! CCACAAGGTTTTGAAGTTGA+AGG - chr3.1:42252605-42252624 MS.gene064632:CDS 40.0%
!!! CTCCATGCTGTTTTTGGAAA+TGG + chr3.1:42251309-42251328 None:intergenic 40.0%
!!! GGAACCACAATGTTTTGAAG+AGG - chr3.1:42252220-42252239 MS.gene064632:CDS 40.0%
!!! TGAGATCTCCATGCTGTTTT+TGG + chr3.1:42251315-42251334 None:intergenic 40.0%
AAAATCTACACCGGGCTGTT+GGG + chr3.1:42252438-42252457 None:intergenic 45.0%
AAAGAAGGCCAAAGATGCGT+GGG - chr3.1:42250082-42250101 MS.gene064632:intron 45.0%
AAGGCACGTTTAGTGGCAAA+AGG - chr3.1:42252407-42252426 MS.gene064632:intron 45.0%
ACTCTTAGAACCGATAGAGG+AGG - chr3.1:42251537-42251556 MS.gene064632:intron 45.0%
ACTGATCCAACCGGAAGATA+TGG - chr3.1:42248872-42248891 MS.gene064632:CDS 45.0%
AGTTGCATTATCTTCGGCAG+AGG - chr3.1:42253399-42253418 MS.gene064632:intron 45.0%
ATCACCGAGGTTTGTACAAG+TGG - chr3.1:42249130-42249149 MS.gene064632:intron 45.0%
ATGCCTTCCATGACCTCTAT+TGG + chr3.1:42250485-42250504 None:intergenic 45.0%
ATTGTCTCCATGCGTACAAC+GGG + chr3.1:42252476-42252495 None:intergenic 45.0%
CACACCACAACAAAATGGTG+TGG - chr3.1:42251632-42251651 MS.gene064632:intron 45.0%
CACACTGAATTTCATCACCG+AGG - chr3.1:42249117-42249136 MS.gene064632:intron 45.0%
CATCCTTCCAATAGAGGTCA+TGG - chr3.1:42250475-42250494 MS.gene064632:intron 45.0%
CATTCAGCGCATTCAGTTCT+AGG - chr3.1:42249457-42249476 MS.gene064632:intron 45.0%
CATTCTGGATACAGAGGAAG+AGG - chr3.1:42250502-42250521 MS.gene064632:intron 45.0%
CCTACTAGAACTCCATCTCT+TGG - chr3.1:42251372-42251391 MS.gene064632:intron 45.0%
CCTCAATCGATCTCCTACAA+AGG - chr3.1:42251761-42251780 MS.gene064632:intron 45.0%
CCTTTGTAGGAGATCGATTG+AGG + chr3.1:42251764-42251783 None:intergenic 45.0%
CTATCTCGAACTGCCTTTGT+AGG + chr3.1:42251777-42251796 None:intergenic 45.0%
CTTCCAATAGAGGTCATGGA+AGG - chr3.1:42250479-42250498 MS.gene064632:intron 45.0%
CTTCCATGACCTCTATTGGA+AGG + chr3.1:42250481-42250500 None:intergenic 45.0%
CTTCCATTCCATGCCTCAAA+AGG + chr3.1:42251804-42251823 None:intergenic 45.0%
CTTCTCAATGGACACTGCTT+TGG + chr3.1:42253686-42253705 None:intergenic 45.0%
GCATTGAGAATCATCCAGCA+AGG - chr3.1:42250023-42250042 MS.gene064632:intron 45.0%
GGCTGTAGCAATCATGTAAC+AGG - chr3.1:42250781-42250800 MS.gene064632:intron 45.0%
GTTTCTGAGTCTTTGTCGGA+TGG + chr3.1:42248842-42248861 None:intergenic 45.0%
TAAAATCTACACCGGGCTGT+TGG + chr3.1:42252439-42252458 None:intergenic 45.0%
TAAAGAAGGCCAAAGATGCG+TGG - chr3.1:42250081-42250100 MS.gene064632:intron 45.0%
TCACCGAGGTTTGTACAAGT+GGG - chr3.1:42249131-42249150 MS.gene064632:intron 45.0%
TCATGAGAATTGCTCCTCGA+TGG + chr3.1:42252113-42252132 None:intergenic 45.0%
TGCTCTGGTACCAAAACTGT+TGG + chr3.1:42249742-42249761 None:intergenic 45.0%
TGGCTATACCGATAGCGATT+GGG - chr3.1:42253285-42253304 MS.gene064632:intron 45.0%
TGTCAATGGAAATACTGGCC+AGG - chr3.1:42249300-42249319 MS.gene064632:intron 45.0%
TTGGCTATACCGATAGCGAT+TGG - chr3.1:42253284-42253303 MS.gene064632:intron 45.0%
TTGGGTTTGGCAGCAATTGT+GGG - chr3.1:42249427-42249446 MS.gene064632:intron 45.0%
! AAAGTGTCTCGCTCAACCAA+GGG - chr3.1:42254212-42254231 MS.gene064632:CDS 45.0%
! AGGATTTTGCGCTATCTCCA+AGG - chr3.1:42253211-42253230 MS.gene064632:intron 45.0%
! CACTATATCCGGCCTTGTAT+TGG + chr3.1:42253125-42253144 None:intergenic 45.0%
! CCAAGAGATGGAGTTCTAGT+AGG + chr3.1:42251375-42251394 None:intergenic 45.0%
! GCTGAATGATGGTGCAGAAA+AGG - chr3.1:42253051-42253070 MS.gene064632:intron 45.0%
! GTGGGAATTTGAGGGAGTAT+AGG - chr3.1:42249149-42249168 MS.gene064632:intron 45.0%
! TGGCTTTACTTACACCTTGC+TGG + chr3.1:42250040-42250059 None:intergenic 45.0%
!! AAAAGTGTCTCGCTCAACCA+AGG - chr3.1:42254211-42254230 MS.gene064632:CDS 45.0%
!! GAGGAAGCGTTTCTTCGAAT+TGG + chr3.1:42249951-42249970 None:intergenic 45.0%
!!! ACTCCTTTTGAGGCATGGAA+TGG - chr3.1:42251798-42251817 MS.gene064632:intron 45.0%
AAAGGCTATTCCCAACAGCC+CGG - chr3.1:42252425-42252444 MS.gene064632:intron 50.0%
AACATCTGCAGGTTGTTCCG+TGG + chr3.1:42253659-42253678 None:intergenic 50.0%
AACTCGCGACAAGAAGGAAG+AGG - chr3.1:42250436-42250455 MS.gene064632:intron 50.0%
ACAGAGGAAGAGGAGGAGAA+AGG - chr3.1:42250512-42250531 MS.gene064632:intron 50.0%
ACTACCAGCCCAATCGCTAT+CGG + chr3.1:42253296-42253315 None:intergenic 50.0%
ACTCGCGACAAGAAGGAAGA+GGG - chr3.1:42250437-42250456 MS.gene064632:intron 50.0%
AGAGGAGGAGAAAGGATACG+AGG - chr3.1:42250520-42250539 MS.gene064632:intron 50.0%
AGTTCCAACTCGCGACAAGA+AGG - chr3.1:42250430-42250449 MS.gene064632:intron 50.0%
CAAACCAGTCTCAACCCCAA+TGG - chr3.1:42253009-42253028 MS.gene064632:intron 50.0%
CGTGGACATCCTTCCAATAG+AGG - chr3.1:42250469-42250488 MS.gene064632:intron 50.0%
CTCTCAAGATCTGTGGGATG+TGG - chr3.1:42249902-42249921 MS.gene064632:intron 50.0%
CTGTGGGATGTGGTTGAAGA+CGG - chr3.1:42249912-42249931 MS.gene064632:intron 50.0%
CTTGGGTTTGGCAGCAATTG+TGG - chr3.1:42249426-42249445 MS.gene064632:intron 50.0%
GCTTTGGTGAGAACATCTGC+AGG + chr3.1:42253670-42253689 None:intergenic 50.0%
GGCACCAGAGCTATATGAAG+AGG - chr3.1:42254011-42254030 MS.gene064632:CDS 50.0%
GTTTACGTGAAGCAGCCACA+AGG - chr3.1:42252590-42252609 MS.gene064632:intron 50.0%
TACCAAGCTTCTTCGTGCCT+TGG + chr3.1:42253231-42253250 None:intergenic 50.0%
TATACCGATAGCGATTGGGC+TGG - chr3.1:42253289-42253308 MS.gene064632:intron 50.0%
TCTGGATACAGAGGAAGAGG+AGG - chr3.1:42250505-42250524 MS.gene064632:intron 50.0%
TCTTCCTTCTTGTCGCGAGT+TGG + chr3.1:42250437-42250456 None:intergenic 50.0%
! AGAAGTATGGAGGGAAGCCA+TGG - chr3.1:42252253-42252272 MS.gene064632:CDS 50.0%
! TCGGCCACACCATTTTGTTG+TGG + chr3.1:42251639-42251658 None:intergenic 50.0%
! TTTTGCTCCCGTTGTACGCA+TGG - chr3.1:42252466-42252485 MS.gene064632:intron 50.0%
!! AGAGGTCATGGAAGGCATTC+TGG - chr3.1:42250487-42250506 MS.gene064632:intron 50.0%
!! GCATTCAGTTCTAGGCACAC+CGG - chr3.1:42249465-42249484 MS.gene064632:intron 50.0%
!! GGAAGGCATTCTGGATACAG+AGG - chr3.1:42250496-42250515 MS.gene064632:intron 50.0%
!! TAAAACAAGCGCCGAGAGCA+TGG - chr3.1:42252672-42252691 MS.gene064632:CDS 50.0%
AAGGCCATTGGGGTTGAGAC+TGG + chr3.1:42253016-42253035 None:intergenic 55.0%
AAGGGCTAGACCTTCTGCTG+AGG - chr3.1:42254230-42254249 MS.gene064632:CDS 55.0%
ATGGAGGGAAGCCATGGATG+TGG - chr3.1:42252259-42252278 MS.gene064632:CDS 55.0%
CTCCAAGGCACGAAGAAGCT+TGG - chr3.1:42253226-42253245 MS.gene064632:intron 55.0%
CTCGCGACAAGAAGGAAGAG+GGG - chr3.1:42250438-42250457 MS.gene064632:intron 55.0%
GGAAGAGGGGACTCATTTCG+TGG - chr3.1:42250451-42250470 MS.gene064632:intron 55.0%
TCAGCAGAAGGTCTAGCCCT+TGG + chr3.1:42254231-42254250 None:intergenic 55.0%
! CTTGTCGCGAGTTGGAACTC+CGG + chr3.1:42250429-42250448 None:intergenic 55.0%
!! GTTTTGGTACCAGAGCAGCC+TGG - chr3.1:42249745-42249764 MS.gene064632:intron 55.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 42248818 42254317 42248818 ID=MS.gene064632
chr3.1 mRNA 42248818 42254317 42248818 ID=MS.gene064632.t1;Parent=MS.gene064632
chr3.1 exon 42253814 42254317 42253814 ID=MS.gene064632.t1.exon1;Parent=MS.gene064632.t1
chr3.1 CDS 42253814 42254317 42253814 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
chr3.1 exon 42253642 42253723 42253642 ID=MS.gene064632.t1.exon2;Parent=MS.gene064632.t1
chr3.1 CDS 42253642 42253723 42253642 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
chr3.1 exon 42253089 42253225 42253089 ID=MS.gene064632.t1.exon3;Parent=MS.gene064632.t1
chr3.1 CDS 42253089 42253225 42253089 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
chr3.1 exon 42252594 42252744 42252594 ID=MS.gene064632.t1.exon4;Parent=MS.gene064632.t1
chr3.1 CDS 42252594 42252744 42252594 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
chr3.1 exon 42251859 42252359 42251859 ID=MS.gene064632.t1.exon5;Parent=MS.gene064632.t1
chr3.1 CDS 42251859 42252359 42251859 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
chr3.1 exon 42248818 42249116 42248818 ID=MS.gene064632.t1.exon6;Parent=MS.gene064632.t1
chr3.1 CDS 42248818 42249116 42248818 ID=cds.MS.gene064632.t1;Parent=MS.gene064632.t1
Gene Sequence

>MS.gene064632

ATGCCAAGTGTTCAACAAAATCCATCCGACAAAGACTCAGAAACATTTGTTGAAACTGATCCAACCGGAAGATATGGAAGATACGATGAATTACTTGGAGCTGGTGCTTGTAAAAAAGTCTATAAAGCATTTGATAATGAAGAAGGAATAGAAGTAGCATGGAATCAAGTTAAGCTCAGAAATTTCAGCAATGACCCTGCAATGATTGAAAGACTTTACTCTGAAGTGAGACTTCTTAGAAACATGAGAAACAAAAACATCATTGGACTTTACAGTGTTTGGAGAGACAAGGAGCATAGCACACTGAATTTCATCACCGAGGTTTGTACAAGTGGGAATTTGAGGGAGTATAGGAAGAAACATAAGCATGTTTCTATTAAGGCTTTGAAGAAGTGGTCTAAGAAAATTTTGGAAGGGTTGAATTATTTACATGTGCATGATCCTTGTATCATTCATAGAGACCTCAACTGCAGTAATGTTTTTGTCAATGGAAATACTGGCCAGGTACATTATTTCTGTTTCATATTCTAATTTTCCATGTTGTTTATCTCAAGATGTCATTAGTACTAAATTATTTGTTTTAATGTATATTAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGAAAGAATCATTCAGCGCATTCAGTTCTAGGCACACCGGAATTTTGTTAAATTATAATTTGTAATTTTCCATTATCCTAGGTTCCTTAATGTATCTAGAAGTTTATTCATGTATCTGTAAGTTCCAGAGAATGACATTTAATATTCCTAGGTGCATTCACTTATTTACTAGAACTTTCTATGCATCAATATAACTAGAGGTTCTATGTATTGTCAAGGCATTGGAATGAAAAGAATTATTACTGCCAATTCATAATTGTCACGTTATCTGTTCCTTTTCTTCCTCTTTCTCCAACAGTTTTGGTACCAGAGCAGCCTGGTTTATTAAAAAAAAAAAAAAAGGAATGGCAACGTCAAATTCAAATTCAATCTTCTCTTACACAACAAATCAAATTCCAGTTTTCAATGGTGAACACTATGATTACTGGAATTCTCAAATGGAAACTATATTTATCTCTCAAGATCTGTGGGATGTGGTTGAAGACGGATACGAAGAACGCCCAATTCGAAGAAACGCTTCCTCGATTGCAGAGAAAGAGAATGAATACAAGGAGAATGTGAAGAAAAATGCTACAGCATTGAGAATCATCCAGCAAGGTGTAAGTAAAGCCATTTATCCTAGAATATTTGGTGTAAAGAAGGCCAAAGATGCGTGGGATATTCTAAAGACGGAGTTTCAAGGCTCGTCAAAAGTGATTTCCATAAAGTTGCAGTCTTTATGGGGCCAATTTGAAAACTTAGCAATGAAAGAAGGTGAGAAAGTCAAAGATTTCTTCTCTAGAGTAACTGAGATTGGAAATCAAATTAAAAGTTGTGGAGAAGAAGTTCCAGAAAAGAAAGTGGTTGAGAAAATATTAAGAAGCCTTCCACAAAAATTTGAACATGTTGTTGCTGTTATTGAAGAAACAAAGGACCTCACAAAGTGAATAGATACAACAATCAGCCATTGGAGAATGTTTTTCAAGCAAAGATGAATATCCGGAGTTCCAACTCGCGACAAGAAGGAAGAGGGGACTCATTTCGTGGACATCCTTCCAATAGAGGTCATGGAAGGCATTCTGGATACAGAGGAAGAGGAGGAGAAAGGATACGAGGTAATTCTAATTCTTATTGCCTTATTTGCAAAAAATCTGGACATGAATCAAAAGATTGTCGTTTTAGATGTACTAGATGCAAAATTCCCAACCATTCAAGTAGAGATTGTTGGCGTAAGAAGAAAGAAGATGATGAAAGAATAAAGGGAATTAATTTTTCTGCAGAAGATGATGCAAATAAGTTATTCTCTACGATGATTAATGATCAAAAATCTGGTGAAATATGGTTTTTAGATAGTGGCTGTAGCAATCATGTAACAGGGAATCAAACCATATTTGAAGAGCTAAATGAAAATTATTCTTCTCATGTTGAACTTGGTGATGGAAAACATGTTAAAATTGAAGGAAAGGGGGTTATAGCAGTTCCTACTAGTCAAGGCAACAAACAATTCATTCATGATGTCCATTACTCTCCTAATATTTCACAAAATATGTTAAGTGTTGGACAGATTATGAAAAGGGGTTACAAGCTGATTTTTGATGATGATAAATGTGAGATTTTTGACAAAAAATCAGGAGAGCATATTGTCACTGTGTTGCAGACTCCTAATAACCTTTTTCCCCTCAACATGAATTCATTTCAGCCTGCTGCATTTAGCAGTAAAAGTACCGATGATTCATATCTTTGGCATTTGAGATATGGTCACTTGAACAACAAAGGTTTGCAGCTCTTAAAACAGAAGAACATGGTTGTTGGTCTTCCAGAAATCAAGACAGATAATGCAGTTTGTGAAGGTTGCATATACGGAAAAATGTATCGTCTTCCATTTCCAAAAACAGCATGGAGATCTCAAGCCCCTCTTGAACTAGTACATTCGGACATTTGTGGACCTACTAGAACTCCATCTCTTGGAAATAAAAGGTACTTTCTGCTCTTTGTTGATGACTACACCAGGATGATTTGGATTTATTTTCTTGATAAGAAATCAGAATCTTTCACCAAGTTCTTGCATTTTAAAGCACTTGTTGAAAATCAAAGTGGTTGCAAGTTGAAGACTCTTAGAACCGATAGAGGAGGCGAATTTATCTACAAGCCGTTTCTCAATTATTGCAAAGAACAAGGCATTAGCAGACAGCTCACAATTAGACACACACCACAACAAAATGGTGTGGCCGAAAGAAAAAATAGAACAATTGTTGAGATGGCTAGAAGCATGTTAAAAGGTAAAGAGCTTCCAAATAGTTTTTGGGCTGAAGCTGTCAGCAGTGCTGTTTACATCCTCAATCGATCTCCTACAAAGGCAGTTCGAGATAGAACTCCTTTTGAGGCATGGAATGGAAGAAAACCAGTCGTAAGTCAACTTAAAGTGTTTGGTTGTATTGCATATTCTCTTGTTCCTGCACAAAATAGAGAAAAGTTTGATGAAAAAGGTGAAAAGCTTATTTTTGTTGGATATAGTGATGAATCAAAAGGATATCGGCTTATTAATCCAACAACTAGTCAGCTCGTAATTTCAAGAGATGTGATTTTTGATGAAAGTGCAGCATGGAAATGGGAAGTTGAAGATGTTGTGAAAACACCTTTGGTGCCTGTTGAATTCAAGCAATCACCTCATAATGTTGCTGAACCATCGAGGAGCAATTCTCATGAAGAAGATTCTGATTCAGAAACACCACCAAGAAAATTCCGTTCCTTGCAAGAAATTCTTGAATCATGTAATGTTACATTTTTTGCACAGGAACCACAATGTTTTGAAGAGGCTATAAAAGAAGAAGTATGGAGGGAAGCCATGGATGTGGAAATGAAAAGCATTGAAAAGAATCGTACTTGGCAGCTAGTAGATCTTCCAAAAGGAAAAGATGCAATTGGTTTGAAGTGGGTCTATAAGACCAAGTATAATGAGGATGGAAGTGTGCAAAAATACAAGGCACGTTTAGTGGCAAAAGGCTATTCCCAACAGCCCGGTGTAGATTTTAATGAGACTTTTGCTCCCGTTGTACGCATGGAGACAATTAGAACTGTTCTTGCTTTGGCAGCTCAATTAGAATTACAAGTTTTTCAACTTGATGTCAAATCAGCCTTCTTGAATGAAGAACTAGAAGAAGAAGTTTACGTGAAGCAGCCACAAGGTTTTGAAGTTGAAGGAAAGGAAGGAAAAGTCTATAAGCTACACAAGGCTCTTTACGGTTTAAAACAAGCGCCGAGAGCATGGAACAGCAAAATTGATGCTTACTTTCTACAAAATGGATTTGTTAAAAGTCCATCTGAACCATCTCTGTATGTGAAAAGAAGTGGTGCTAATTTCTTGATGGTTTGTCTCTATGTTGATGATTTAATTTATGCAGGAACAAATCATGATATGGTGCAGTCATTCAAGGAAGCAATGATGAAAGAATATGAGATGACAGATCTTGGATTAATGAAATACTTTCTTGGAATTCAAGTGAAGCAAACAAAAGGCGAGATTTTTATCACACAAGAAAAATACATTCAAGATTTACTTAAAAAGTTCAGATTGGAGAGCTGCAAACCAGTCTCAACCCCAATGGCCTTGAATGAAAAGTTGCAGCTGAATGATGGTGCAGAAAAGGCAGATCCAAAAGTCTACAGAAGCCTTGTTGGTTCCTTGATTTATCTCACCAATACAAGGCCGGATATAGTGCATTCAGTTAGTTTGGTTTCTAGATTCATGAATGAGCCGAGTAAGCTTCATTTTGCAGCAGCAAAAAGGATTTTGCGCTATCTCCAAGGCACGAAGAAGCTTGGTATCAAGTATGTGAAGGAAGAAAACAACGAGTTGGTTGGCTATACCGATAGCGATTGGGCTGGTAGTTTCGATGACAGAAAAAGCACTTCAGCCTATGTTTTTTGTCTAGGATCTAAAGCTATTTCATGGAGTTCTAAAAAGCAAAACTCAGTTGCATTATCTTCGGCAGAGGCTGAATATATCTCAGCGAATGAAGCTACACGTGAAGCTGTTTAGTTGAGAAGAATTTTGATTGACTTGCAGCAAAAGGTAGAAGATCCAACTCCTATTTTCTGTGACAACCAATCAGCAATTTCAATGTCCAAGAATCCAGTTTTTCATGGAAGGTCAAAGCATATTGAGCTGCGTCACAACTACATTCGTGATATGGTTCAAAGGAAGGAAATCAACTTAGAATACATCAAGACCACGGAACAACCTGCAGATGTTCTCACCAAAGCAGTGTCCATTGAGAAGCTTGAACAGTTCAAAGATATTATGAAAATTACAAATTAAGAGAGGGTGTTAAATTATAATTTGTAATTTTCCATTATCCTAGGTTCCTTAATGTATCTAGAAGTTTATTCATGTATCTGTAAGTTCCAGAGAATGACATTTAATATTCCTAGGTGCATTCACTTATTTACTAGAACTTTCTATGCATCAATATAACTAGAGGTTCTATGTATTGTCAAGGCATTGGAATGAAAAGAATTATTACTGCCAATTCATAATTGTCACGTTTTCTGTTCCTTTTCTTCCTCTTTCTCCAACAAATTTATGGCACCAGAGCTATATGAAGAGGATTACACAGAAATGGTAGACATATACTCATTTGGAATGTTAGTATTAGAGATGGTGACACTAGAGATTCCATATAGTGAATGTGACATTGTTGCAAAGATATACAAGAAGGTGACTTCAGGTGTGAGACCGCAATCCTTGAACAAGATAAAAGATGTAGAAGTGAAGACTTTCATCGAAAAGTGTCTCGCTCAACCAAGGGCTAGACCTTCTGCTGAGGAATTGCTAAAGGACCCTTTTTTTGATGATGTAGAGTACGATGAAAACGACGATGTTGATTACTAA
Protein sequence

>MS.gene064632.t1

MPSVQQNPSDKDSETFVETDPTGRYGRYDELLGAGACKKVYKAFDNEEGIEVAWNQVKLRNFSNDPAMIERLYSEVRLLRNMRNKNIIGLYSVWRDKEHSTLNFITEVCTSGNLREYRKKHKHVSIKALKKWSKKILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSVLGTPEFYLWDVVEDGYEERPIRRNASSIAEKENEYKENVKKNATALRIIQQGPLENVFQAKMNIRSSNSRQEGRGDSFRGHPSNRGHGRHSGYRGRGGERIRDSGCSNHVTGNQTIFEELNENYSSHVELGDGKHVKIEGKGVIAVPTSQGNKQFIHDVHYSPNISQNMLSVGQIMKRGYKLIFDDDKCEIFDKKSGEHIVTVLQTPNNLFPLNMNSFQPAAFSSKSTDDSYLWHLRYGHLNNKGLQLLKQKNMVVGLPEIKTDNAVCEELYEEDYTEMVDIYSFGMLVLEMVTLEIPYSECDIVAKIYKKVTSGVRPQSLNKIKDVEVKTFIEKCLAQPRARPSAEELLKDPFFDDVEYDENDDVDY