Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064700.t1 | PNX73002.1 | 42.7 | 854 | 184 | 9 | 105 | 742 | 1 | 765 | 1.70E-160 | 576.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064700.t1 | Q9LKR4 | 32.8 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 5.7e-16 | 87.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064700.t1 | A0A2K3L384 | 42.7 | 854 | 184 | 9 | 105 | 742 | 1 | 765 | 1.2e-160 | 576.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene064700.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064700.t1 | MTR_3g080590 | 84.516 | 155 | 20 | 1 | 1 | 151 | 1 | 155 | 1.63e-76 | 244 |
| MS.gene064700.t1 | MTR_7g446520 | 45.078 | 193 | 91 | 2 | 94 | 286 | 81 | 258 | 1.37e-43 | 161 |
| MS.gene064700.t1 | MTR_0645s0010 | 67.593 | 108 | 29 | 3 | 284 | 391 | 24 | 125 | 7.37e-35 | 129 |
| MS.gene064700.t1 | MTR_7g446480 | 50.893 | 112 | 55 | 0 | 175 | 286 | 140 | 251 | 2.62e-30 | 122 |
| MS.gene064700.t1 | MTR_7g028855 | 43.421 | 152 | 81 | 2 | 94 | 241 | 113 | 263 | 3.26e-28 | 119 |
| MS.gene064700.t1 | MTR_7g446510 | 50.000 | 112 | 56 | 0 | 175 | 286 | 155 | 266 | 8.61e-28 | 115 |
| MS.gene064700.t1 | MTR_5g076070 | 28.916 | 166 | 115 | 2 | 98 | 260 | 50 | 215 | 3.92e-19 | 89.0 |
| MS.gene064700.t1 | MTR_1g070355 | 31.250 | 176 | 118 | 2 | 101 | 273 | 74 | 249 | 5.70e-19 | 91.7 |
| MS.gene064700.t1 | MTR_6g022080 | 25.294 | 170 | 124 | 1 | 94 | 260 | 78 | 247 | 2.93e-16 | 79.7 |
| MS.gene064700.t1 | MTR_8g035530 | 45.455 | 77 | 40 | 1 | 88 | 164 | 1 | 75 | 1.19e-15 | 72.8 |
| MS.gene064700.t1 | MTR_3g450850 | 29.651 | 172 | 109 | 4 | 107 | 266 | 53 | 224 | 2.18e-12 | 69.7 |
| MS.gene064700.t1 | MTR_8g468460 | 40.000 | 100 | 57 | 2 | 305 | 404 | 9 | 105 | 1.68e-11 | 62.0 |
| MS.gene064700.t1 | MTR_0402s0040 | 28.736 | 174 | 119 | 5 | 104 | 274 | 29 | 200 | 1.97e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064700.t1 | AT4G38180 | 28.986 | 207 | 133 | 5 | 248 | 449 | 441 | 638 | 1.39e-17 | 88.2 |
| MS.gene064700.t1 | AT4G38180 | 30.403 | 273 | 167 | 11 | 23 | 286 | 4 | 262 | 8.67e-13 | 72.4 |
| MS.gene064700.t1 | AT4G15090 | 30.516 | 213 | 139 | 5 | 284 | 495 | 452 | 656 | 3.81e-17 | 86.7 |
| MS.gene064700.t1 | AT4G15090 | 30.516 | 213 | 139 | 5 | 284 | 495 | 452 | 656 | 3.81e-17 | 86.7 |
| MS.gene064700.t1 | AT4G15090 | 30.516 | 213 | 139 | 5 | 284 | 495 | 452 | 656 | 3.81e-17 | 86.7 |
| MS.gene064700.t1 | AT4G15090 | 30.516 | 213 | 139 | 5 | 284 | 495 | 452 | 656 | 3.81e-17 | 86.7 |
| MS.gene064700.t1 | AT4G15090 | 30.516 | 213 | 139 | 5 | 284 | 495 | 452 | 656 | 3.81e-17 | 86.7 |
| MS.gene064700.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.05e-17 | 86.3 |
| MS.gene064700.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.38e-17 | 85.9 |
| MS.gene064700.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 4.96e-17 | 85.9 |
| MS.gene064700.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 5.28e-17 | 85.9 |
| MS.gene064700.t1 | AT5G28530 | 32.768 | 177 | 113 | 4 | 107 | 278 | 61 | 236 | 5.28e-17 | 85.9 |
| MS.gene064700.t1 | AT3G22170 | 27.232 | 224 | 152 | 5 | 284 | 504 | 461 | 676 | 1.45e-15 | 81.6 |
| MS.gene064700.t1 | AT3G22170 | 27.232 | 224 | 152 | 5 | 284 | 504 | 461 | 676 | 1.45e-15 | 81.6 |
| MS.gene064700.t1 | AT4G38170 | 26.425 | 193 | 136 | 3 | 256 | 445 | 210 | 399 | 5.45e-15 | 79.3 |
| MS.gene064700.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 386 | 613 | 1.07e-14 | 79.0 |
| MS.gene064700.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 386 | 613 | 1.07e-14 | 79.0 |
| MS.gene064700.t1 | AT2G27110 | 26.423 | 246 | 159 | 8 | 246 | 487 | 241 | 468 | 1.10e-14 | 78.6 |
| MS.gene064700.t1 | AT1G76320 | 26.667 | 180 | 122 | 5 | 273 | 448 | 374 | 547 | 1.85e-11 | 68.2 |
| MS.gene064700.t1 | AT1G76320 | 26.667 | 180 | 122 | 5 | 273 | 448 | 374 | 547 | 1.97e-11 | 68.2 |
| MS.gene064700.t1 | AT1G76320 | 26.667 | 180 | 122 | 5 | 273 | 448 | 374 | 547 | 1.97e-11 | 68.2 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 2.75e-11 | 67.8 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 2.75e-11 | 67.8 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 3.77e-11 | 67.4 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 3.78e-11 | 67.4 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 400 | 563 | 3.78e-11 | 67.4 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 343 | 506 | 4.14e-11 | 67.0 |
| MS.gene064700.t1 | AT1G76320 | 26.667 | 180 | 122 | 5 | 273 | 448 | 374 | 547 | 4.40e-11 | 67.0 |
| MS.gene064700.t1 | AT4G19990 | 24.699 | 166 | 123 | 2 | 284 | 449 | 414 | 577 | 4.85e-11 | 67.0 |
Find 138 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGTTGATTGTGATATT+TGG | 0.171428 | 3.4:-97291249 | None:intergenic |
| CTCTTGCAAATCAGACTTTC+AGG | 0.192125 | 3.4:-97290460 | None:intergenic |
| AAAATTGATCCACCATTATT+TGG | 0.205525 | 3.4:-97291486 | None:intergenic |
| CCCATAGTTTCTCAATGTTT+TGG | 0.242135 | 3.4:-97291743 | None:intergenic |
| TCACTCAATTTGCTGTAATT+AGG | 0.275503 | 3.4:-97289161 | None:intergenic |
| AAATGATGATATAAGGGATA+TGG | 0.309095 | 3.4:+97288824 | MS.gene064700:CDS |
| TAACACCATACCCAACATTA+TGG | 0.313783 | 3.4:-97291437 | None:intergenic |
| AGGACTTGGGTTTATCAAAA+AGG | 0.326599 | 3.4:+97289277 | MS.gene064700:CDS |
| TGATAAACCCAAGTCCTTCA+TGG | 0.346028 | 3.4:-97289271 | None:intergenic |
| ATGTGACAAATGATGATATA+AGG | 0.351919 | 3.4:+97288817 | MS.gene064700:CDS |
| ACGACTTTGTTCGTACGATT+TGG | 0.356788 | 3.4:+97289072 | MS.gene064700:CDS |
| ACACCAATTCCAGCAAGTTC+TGG | 0.360337 | 3.4:-97290868 | None:intergenic |
| TAAGAGCGCAAGTGATTATA+AGG | 0.371814 | 3.4:+97290612 | MS.gene064700:CDS |
| AACAACGATGTTCGTATTGA+TGG | 0.384308 | 3.4:+97288705 | MS.gene064700:CDS |
| CACTATGGGCTGCCAAATAA+TGG | 0.387380 | 3.4:+97291474 | MS.gene064700:CDS |
| TGTAAGAACATGTCATATCT+TGG | 0.387474 | 3.4:+97289223 | MS.gene064700:CDS |
| TGTTCTAATTGTAGAAATCC+TGG | 0.392101 | 3.4:+97290826 | MS.gene064700:CDS |
| ATCCATGTTGTCATACTTCA+TGG | 0.394339 | 3.4:-97290431 | None:intergenic |
| ATCATTCGCAACAAATTTGT+TGG | 0.403036 | 3.4:-97290740 | None:intergenic |
| TCTAACACTGCTCTGCATAC+TGG | 0.407068 | 3.4:+97291546 | MS.gene064700:CDS |
| ATATAATTTCACGGATCATC+AGG | 0.409639 | 3.4:+97289304 | MS.gene064700:CDS |
| GATTATAAGGAGGCTCTAGA+AGG | 0.413898 | 3.4:+97290625 | MS.gene064700:CDS |
| GATTCATTATCAGACTCAAT+AGG | 0.414121 | 3.4:-97290922 | None:intergenic |
| GCACTGGTATTACACGTAAG+AGG | 0.418801 | 3.4:+97291130 | MS.gene064700:CDS |
| AACAAATACAAGCACTAGAA+AGG | 0.422563 | 3.4:+97291209 | MS.gene064700:CDS |
| TGTCCAGAACTTGCTGGAAT+TGG | 0.422787 | 3.4:+97290865 | MS.gene064700:CDS |
| TGCTGTAATTAGGCATCAAA+TGG | 0.427394 | 3.4:-97289151 | None:intergenic |
| AAAGTTTAAAGATGTCAAAA+AGG | 0.436388 | 3.4:+97290210 | MS.gene064700:CDS |
| AAGGGTGGCCATGAAGGACT+TGG | 0.449428 | 3.4:+97289263 | MS.gene064700:CDS |
| TAAATTTGTTGCGAGTGATA+AGG | 0.460501 | 3.4:+97290717 | MS.gene064700:CDS |
| AAATGGACATGACAAGGATA+AGG | 0.461918 | 3.4:+97290690 | MS.gene064700:CDS |
| GTAAGAACATGTCATATCTT+GGG | 0.464989 | 3.4:+97289224 | MS.gene064700:CDS |
| GCGTCAATTAGTATGCAATA+AGG | 0.467578 | 3.4:+97288959 | MS.gene064700:CDS |
| TTCGAATGGTTAGCGTAGAT+CGG | 0.471186 | 3.4:-97289019 | None:intergenic |
| AATAGCCGTCATGAGGGAAA+TGG | 0.477370 | 3.4:+97290673 | MS.gene064700:CDS |
| CAAGGGAAAGAGAACTTTGA+TGG | 0.478759 | 3.4:+97288777 | MS.gene064700:CDS |
| CGGACGTGTCCAGAACTTGC+TGG | 0.483560 | 3.4:+97290859 | MS.gene064700:CDS |
| TGCAGAACAATTAGTTCGAA+TGG | 0.488516 | 3.4:-97289033 | None:intergenic |
| ATGTGAAACGTGATTCTAAT+GGG | 0.492055 | 3.4:+97288925 | MS.gene064700:CDS |
| AAAGGACTTATATAATTTCA+CGG | 0.493961 | 3.4:+97289295 | MS.gene064700:CDS |
| GAAATCCTGGGCACACAATA+CGG | 0.497533 | 3.4:+97290839 | MS.gene064700:CDS |
| CACTCTGTAGCAGTGTCAAA+TGG | 0.499398 | 3.4:+97291087 | MS.gene064700:CDS |
| AATGGACATGACAAGGATAA+GGG | 0.502443 | 3.4:+97290691 | MS.gene064700:CDS |
| AGTGTTAGAATGTGATGAGA+GGG | 0.502952 | 3.4:-97291532 | None:intergenic |
| CCACTGGTTTGAAGTAAGAA+AGG | 0.504797 | 3.4:+97288899 | MS.gene064700:CDS |
| AATGGTGTGACCCGTGACTT+TGG | 0.505092 | 3.4:+97291366 | MS.gene064700:CDS |
| GCAAGGGTTAAAATACAAGA+TGG | 0.508614 | 3.4:+97289326 | MS.gene064700:CDS |
| GTATCACTATATACATCAAA+AGG | 0.509968 | 3.4:-97288558 | None:intergenic |
| GGTCAAAAGGGTGGCCATGA+AGG | 0.510809 | 3.4:+97289257 | MS.gene064700:CDS |
| TGTGATGAGAGGGTAGTTGT+CGG | 0.513549 | 3.4:-97291522 | None:intergenic |
| GATGTGAAACGTGATTCTAA+TGG | 0.514927 | 3.4:+97288924 | MS.gene064700:CDS |
| TATTATTTGCAAAATACCAC+TGG | 0.520141 | 3.4:+97288883 | MS.gene064700:CDS |
| ATTTAGTCTGCAACTTGTCA+AGG | 0.524883 | 3.4:-97290348 | None:intergenic |
| CAAGGGTTAAAATACAAGAT+GGG | 0.527779 | 3.4:+97289327 | MS.gene064700:CDS |
| AAAGTCTGATTTGCAAGAGA+TGG | 0.531904 | 3.4:+97290464 | MS.gene064700:CDS |
| GTTCTAATTGTAGAAATCCT+GGG | 0.533951 | 3.4:+97290827 | MS.gene064700:CDS |
| AAGTGCCCCTCGACGAAACA+TGG | 0.534361 | 3.4:-97290554 | None:intergenic |
| CACGTCCGTATTGTGTGCCC+AGG | 0.534840 | 3.4:-97290844 | None:intergenic |
| ACAAATACAAGCACTAGAAA+GGG | 0.535750 | 3.4:+97291210 | MS.gene064700:CDS |
| GTAGTTGTCGGAGGGAATTG+TGG | 0.539742 | 3.4:-97291510 | None:intergenic |
| TGTGACAAATGATGATATAA+GGG | 0.541240 | 3.4:+97288818 | MS.gene064700:CDS |
| AGCTAATTCGTGGTTGTGAG+AGG | 0.541718 | 3.4:-97289114 | None:intergenic |
| AATAAGGAGGGTGTTAATGA+TGG | 0.543414 | 3.4:+97288975 | MS.gene064700:CDS |
| AAGACAGCCATTGTGCAAGT+TGG | 0.545484 | 3.4:+97291412 | MS.gene064700:CDS |
| ACTTCATGGCACAAATAATG+TGG | 0.547507 | 3.4:-97290417 | None:intergenic |
| TCGTCATTTGCCTCCCAAGA+AGG | 0.555407 | 3.4:+97290514 | MS.gene064700:CDS |
| CACTGGTATTACACGTAAGA+GGG | 0.559146 | 3.4:+97291131 | MS.gene064700:CDS |
| GGTGTCGTGTCTGAAGATCA+AGG | 0.560464 | 3.4:+97290886 | MS.gene064700:CDS |
| CAGTGTTAGAATGTGATGAG+AGG | 0.563750 | 3.4:-97291533 | None:intergenic |
| CGAGATGTTGAGAAAAGCAC+TGG | 0.563759 | 3.4:+97291114 | MS.gene064700:CDS |
| TTCATCATTACCTTCTTGGG+AGG | 0.565482 | 3.4:-97290524 | None:intergenic |
| GTCTGAAGATCAAGGGGAGA+AGG | 0.567087 | 3.4:+97290894 | MS.gene064700:CDS |
| CCTTTGACATTCACCATCAG+TGG | 0.574175 | 3.4:-97290763 | None:intergenic |
| AACGCAAAGGAGCTAATTCG+TGG | 0.575631 | 3.4:-97289124 | None:intergenic |
| GTGGAATTTAACCATGGTAA+TGG | 0.576772 | 3.4:+97288741 | MS.gene064700:CDS |
| GCACAAATAATGTGGGAACA+TGG | 0.578248 | 3.4:-97290409 | None:intergenic |
| AAATGACCATGTTTCGTCGA+GGG | 0.581274 | 3.4:+97290548 | MS.gene064700:CDS |
| GTGTCGTGTCTGAAGATCAA+GGG | 0.581492 | 3.4:+97290887 | MS.gene064700:CDS |
| GCTAATTCGTGGTTGTGAGA+GGG | 0.582404 | 3.4:-97289113 | None:intergenic |
| TCAATTAGTATGCAATAAGG+AGG | 0.584633 | 3.4:+97288962 | MS.gene064700:CDS |
| AATGACCATGTTTCGTCGAG+GGG | 0.585541 | 3.4:+97290549 | MS.gene064700:CDS |
| GCAAGTTGGAACCATAATGT+TGG | 0.585606 | 3.4:+97291426 | MS.gene064700:CDS |
| TAAGATAAATAGCCGTCATG+AGG | 0.585792 | 3.4:+97290666 | MS.gene064700:CDS |
| AGGGTGGCCATGAAGGACTT+GGG | 0.586883 | 3.4:+97289264 | MS.gene064700:CDS |
| GAAGCTTCAAAGATATTCAC+CGG | 0.587720 | 3.4:+97290184 | MS.gene064700:CDS |
| AAGATAAATAGCCGTCATGA+GGG | 0.587755 | 3.4:+97290667 | MS.gene064700:CDS |
| ATACTCACCGGTGTATAACT+CGG | 0.588936 | 3.4:-97291582 | None:intergenic |
| ATGAGAGGGTAGTTGTCGGA+GGG | 0.591320 | 3.4:-97291518 | None:intergenic |
| CATGTCCATTTCCCTCATGA+CGG | 0.591948 | 3.4:-97290678 | None:intergenic |
| ATTTCACGGATCATCAGGCA+AGG | 0.592596 | 3.4:+97289309 | MS.gene064700:CDS |
| TGGAACCATAATGTTGGGTA+TGG | 0.594448 | 3.4:+97291432 | MS.gene064700:CDS |
| CTTCATGGCACAAATAATGT+GGG | 0.594948 | 3.4:-97290416 | None:intergenic |
| GCTACTTTGAGTTATTTCCA+AGG | 0.596592 | 3.4:+97289359 | MS.gene064700:CDS |
| TATGAGTGCGTTGAAGAATG+TGG | 0.597255 | 3.4:+97291685 | MS.gene064700:CDS |
| GAACGAGATGAAGATGAGGA+TGG | 0.598765 | 3.4:+97290265 | MS.gene064700:CDS |
| CAAGTTGGAACCATAATGTT+GGG | 0.599464 | 3.4:+97291427 | MS.gene064700:CDS |
| CCTTTCTTACTTCAAACCAG+TGG | 0.606619 | 3.4:-97288899 | None:intergenic |
| GTCAATGCAGTTGTCAGCAT+AGG | 0.607551 | 3.4:-97290148 | None:intergenic |
| ATATAGTGATACAGATGAGG+TGG | 0.607738 | 3.4:+97288569 | MS.gene064700:CDS |
| AAGGGTTAAAATACAAGATG+GGG | 0.610552 | 3.4:+97289328 | MS.gene064700:CDS |
| AAACATCGCAGTGACTATTG+TGG | 0.611836 | 3.4:+97291719 | MS.gene064700:CDS |
| ATTATAAGGAGGCTCTAGAA+GGG | 0.613050 | 3.4:+97290626 | MS.gene064700:CDS |
| GACACTGATAGTGATACAGA+TGG | 0.614810 | 3.4:+97288615 | MS.gene064700:CDS |
| TTAGAACAACATCTTGTCCT+CGG | 0.616961 | 3.4:-97290811 | None:intergenic |
| GTTGATAAACAAGTTGCTAG+TGG | 0.617676 | 3.4:+97289185 | MS.gene064700:CDS |
| TGATAGTGATACAGATGGGG+TGG | 0.618742 | 3.4:+97288620 | MS.gene064700:CDS |
| GATGAGAGGGTAGTTGTCGG+AGG | 0.619255 | 3.4:-97291519 | None:intergenic |
| CATTGAACGAGATGAAGATG+AGG | 0.623154 | 3.4:+97290261 | MS.gene064700:CDS |
| CCACTGATGGTGAATGTCAA+AGG | 0.624002 | 3.4:+97290763 | MS.gene064700:CDS |
| TATGGTTCCAACTTGCACAA+TGG | 0.627946 | 3.4:-97291419 | None:intergenic |
| TTTCACGGATCATCAGGCAA+GGG | 0.637022 | 3.4:+97289310 | MS.gene064700:CDS |
| CATTGCAAACACCATTACCA+TGG | 0.642035 | 3.4:-97288752 | None:intergenic |
| TATGGGCTGCCAAATAATGG+TGG | 0.644398 | 3.4:+97291477 | MS.gene064700:CDS |
| AATGGTGTTTGCAATGAGCA+AGG | 0.648235 | 3.4:+97288759 | MS.gene064700:CDS |
| GCTAGTGGTCTACATTCGCA+AGG | 0.649023 | 3.4:+97289200 | MS.gene064700:CDS |
| ATCAAATGGACAAAACGCAA+AGG | 0.651947 | 3.4:-97289137 | None:intergenic |
| AAAATGACCATGTTTCGTCG+AGG | 0.652304 | 3.4:+97290547 | MS.gene064700:CDS |
| TGAGGGAAATGGACATGACA+AGG | 0.654599 | 3.4:+97290684 | MS.gene064700:CDS |
| ATGGTGTTTGCAATGAGCAA+GGG | 0.657603 | 3.4:+97288760 | MS.gene064700:CDS |
| TCTGTAGCAGTGTCAAATGG+TGG | 0.657609 | 3.4:+97291090 | MS.gene064700:CDS |
| TGATGGAGATGCAGACGGTG+TGG | 0.658848 | 3.4:+97288722 | MS.gene064700:CDS |
| ACACTGATAGTGATACAGAT+GGG | 0.663559 | 3.4:+97288616 | MS.gene064700:CDS |
| TGTCGTGTCTGAAGATCAAG+GGG | 0.668190 | 3.4:+97290888 | MS.gene064700:CDS |
| TGCCATGAAGTATGACAACA+TGG | 0.671427 | 3.4:+97290429 | MS.gene064700:CDS |
| TGAATGTCAAAGGTGCCCGT+AGG | 0.674674 | 3.4:+97290773 | MS.gene064700:CDS |
| CAATTAGTATGCAATAAGGA+GGG | 0.675920 | 3.4:+97288963 | MS.gene064700:CDS |
| CGTATTGATGGAGATGCAGA+CGG | 0.679775 | 3.4:+97288717 | MS.gene064700:CDS |
| CAATGTTCCGAGTTATACAC+CGG | 0.682160 | 3.4:+97291575 | MS.gene064700:CDS |
| CATTTGACACTGCTACAGAG+TGG | 0.682675 | 3.4:-97291086 | None:intergenic |
| GAGCGCAAGTGATTATAAGG+AGG | 0.683366 | 3.4:+97290615 | MS.gene064700:CDS |
| TGTTGCGAATGATCCACTGA+TGG | 0.687875 | 3.4:+97290750 | MS.gene064700:CDS |
| GACGGTGTGGAATTTAACCA+TGG | 0.688761 | 3.4:+97288735 | MS.gene064700:CDS |
| TGTATATAGTGATACAGATG+AGG | 0.703043 | 3.4:+97288566 | MS.gene064700:CDS |
| TGTAGACGCTTTGAACGCAG+AGG | 0.705116 | 3.4:+97290382 | MS.gene064700:CDS |
| ACATAGACTATTGAACGCAG+CGG | 0.723695 | 3.4:-97290578 | None:intergenic |
| CACTGATAGTGATACAGATG+GGG | 0.724418 | 3.4:+97288617 | MS.gene064700:CDS |
| AATTATGCAAGAAATCCACA+AGG | 0.743577 | 3.4:-97290057 | None:intergenic |
| GGATATGGAATTCAACACAG+AGG | 0.763384 | 3.4:+97288839 | MS.gene064700:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATTTTAATATGCACTA+TGG | + | chr3.4:97291459-97291478 | MS.gene064700:CDS | 15.0% |
| !!! | ATTATTTTAATATGCACTAT+GGG | + | chr3.4:97291460-97291479 | MS.gene064700:CDS | 15.0% |
| !!! | TCATAAACTGTTTTAAATAT+AGG | - | chr3.4:97291670-97291689 | None:intergenic | 15.0% |
| !!! | TGAAATTGTATATGATATTT+TGG | + | chr3.4:97291015-97291034 | MS.gene064700:intron | 15.0% |
| !! | AAAGGACTTATATAATTTCA+CGG | + | chr3.4:97289295-97289314 | MS.gene064700:CDS | 20.0% |
| !! | AAAGTTTAAAGATGTCAAAA+AGG | + | chr3.4:97290210-97290229 | MS.gene064700:CDS | 20.0% |
| !!! | ATTTTCAAGGTTAATGTATT+TGG | + | chr3.4:97290298-97290317 | MS.gene064700:CDS | 20.0% |
| !!! | TTGTTTTAATTGTTGTAGAA+TGG | + | chr3.4:97291348-97291367 | MS.gene064700:intron | 20.0% |
| ! | AAAATTGATCCACCATTATT+TGG | - | chr3.4:97291489-97291508 | None:intergenic | 25.0% |
| ! | AAATGATGATATAAGGGATA+TGG | + | chr3.4:97288824-97288843 | MS.gene064700:CDS | 25.0% |
| ! | AATTAAAGCACAAGCAAAAA+TGG | - | chr3.4:97289591-97289610 | None:intergenic | 25.0% |
| ! | ATATCCACTAAAAATGACAA+GGG | - | chr3.4:97289549-97289568 | None:intergenic | 25.0% |
| ! | ATGTGACAAATGATGATATA+AGG | + | chr3.4:97288817-97288836 | MS.gene064700:CDS | 25.0% |
| ! | CAGCAAATATACTATAACAA+AGG | - | chr3.4:97291285-97291304 | None:intergenic | 25.0% |
| ! | GATGGAAAAAATAAGAAGAA+TGG | + | chr3.4:97288993-97289012 | MS.gene064700:CDS | 25.0% |
| ! | GGTGGGTAAAAAAAATTTAT+CGG | + | chr3.4:97289915-97289934 | MS.gene064700:intron | 25.0% |
| ! | GTATCACTATATACATCAAA+AGG | - | chr3.4:97288561-97288580 | None:intergenic | 25.0% |
| ! | TAAACAATCAAAATACTCAC+CGG | - | chr3.4:97291597-97291616 | None:intergenic | 25.0% |
| ! | TATATCCACTAAAAATGACA+AGG | - | chr3.4:97289550-97289569 | None:intergenic | 25.0% |
| ! | TATTATTTGCAAAATACCAC+TGG | + | chr3.4:97288883-97288902 | MS.gene064700:CDS | 25.0% |
| ! | TGTGACAAATGATGATATAA+GGG | + | chr3.4:97288818-97288837 | MS.gene064700:CDS | 25.0% |
| !! | CAAAAAAGATGTAGCTTTTT+CGG | + | chr3.4:97290321-97290340 | MS.gene064700:CDS | 25.0% |
| !! | GACATCTTTAAACTTTTTAC+CGG | - | chr3.4:97290206-97290225 | None:intergenic | 25.0% |
| !! | TCAATGTTGATTGTGATATT+TGG | - | chr3.4:97291252-97291271 | None:intergenic | 25.0% |
| !! | TTTTTCATCATTACCTTCTT+GGG | - | chr3.4:97290530-97290549 | None:intergenic | 25.0% |
| !!! | GGTTCTAAATTTGTTTTCAA+AGG | + | chr3.4:97289640-97289659 | MS.gene064700:intron | 25.0% |
| !!! | TTTTTTCATCATTACCTTCT+TGG | - | chr3.4:97290531-97290550 | None:intergenic | 25.0% |
| AAACAATAGAGACATACAAG+TGG | + | chr3.4:97289618-97289637 | MS.gene064700:intron | 30.0% | |
| AACAAATACAAGCACTAGAA+AGG | + | chr3.4:97291209-97291228 | MS.gene064700:CDS | 30.0% | |
| AACAATAGAGACATACAAGT+GGG | + | chr3.4:97289619-97289638 | MS.gene064700:intron | 30.0% | |
| AAGGGTTAAAATACAAGATG+GGG | + | chr3.4:97289328-97289347 | MS.gene064700:CDS | 30.0% | |
| AATTATGCAAGAAATCCACA+AGG | - | chr3.4:97290060-97290079 | None:intergenic | 30.0% | |
| ACAAATACAAGCACTAGAAA+GGG | + | chr3.4:97291210-97291229 | MS.gene064700:CDS | 30.0% | |
| ACCTATAGAAAGAACAAGTA+TGG | + | chr3.4:97289518-97289537 | MS.gene064700:intron | 30.0% | |
| ATACTTGTTCTTTCTATAGG+TGG | - | chr3.4:97289519-97289538 | None:intergenic | 30.0% | |
| ATATAATTTCACGGATCATC+AGG | + | chr3.4:97289304-97289323 | MS.gene064700:CDS | 30.0% | |
| ATCATTCGCAACAAATTTGT+TGG | - | chr3.4:97290743-97290762 | None:intergenic | 30.0% | |
| ATGTGAAACGTGATTCTAAT+GGG | + | chr3.4:97288925-97288944 | MS.gene064700:CDS | 30.0% | |
| CAAGGGTTAAAATACAAGAT+GGG | + | chr3.4:97289327-97289346 | MS.gene064700:CDS | 30.0% | |
| CAATTAGTATGCAATAAGGA+GGG | + | chr3.4:97288963-97288982 | MS.gene064700:CDS | 30.0% | |
| GAGTTTACATTTACAGATGA+TGG | + | chr3.4:97289413-97289432 | MS.gene064700:intron | 30.0% | |
| GATTCATTATCAGACTCAAT+AGG | - | chr3.4:97290925-97290944 | None:intergenic | 30.0% | |
| GTAAGAACATGTCATATCTT+GGG | + | chr3.4:97289224-97289243 | MS.gene064700:CDS | 30.0% | |
| GTTCTAATTGTAGAAATCCT+GGG | + | chr3.4:97290827-97290846 | MS.gene064700:CDS | 30.0% | |
| TATCCACTAAAAATGACAAG+GGG | - | chr3.4:97289548-97289567 | None:intergenic | 30.0% | |
| TCAATTAGTATGCAATAAGG+AGG | + | chr3.4:97288962-97288981 | MS.gene064700:CDS | 30.0% | |
| TCCATACTTGTTCTTTCTAT+AGG | - | chr3.4:97289522-97289541 | None:intergenic | 30.0% | |
| TGTAAGAACATGTCATATCT+TGG | + | chr3.4:97289223-97289242 | MS.gene064700:CDS | 30.0% | |
| TGTATATAGTGATACAGATG+AGG | + | chr3.4:97288566-97288585 | MS.gene064700:CDS | 30.0% | |
| TGTTCTAATTGTAGAAATCC+TGG | + | chr3.4:97290826-97290845 | MS.gene064700:CDS | 30.0% | |
| TTCTAACACCACACAAAAAA+TGG | - | chr3.4:97289976-97289995 | None:intergenic | 30.0% | |
| ! | ATTTTTCATGTCCAAAGTCA+CGG | - | chr3.4:97291380-97291399 | None:intergenic | 30.0% |
| ! | TTTGAGTTATTTCCAAGGTA+AGG | + | chr3.4:97289364-97289383 | MS.gene064700:intron | 30.0% |
| ! | TTTTGGATGTTTGTCATACA+TGG | - | chr3.4:97289666-97289685 | None:intergenic | 30.0% |
| !! | ATTTTGACCTATCAAACAAC+AGG | + | chr3.4:97289894-97289913 | MS.gene064700:intron | 30.0% |
| !! | TAAATTTGTTGCGAGTGATA+AGG | + | chr3.4:97290717-97290736 | MS.gene064700:CDS | 30.0% |
| !! | TCACTCAATTTGCTGTAATT+AGG | - | chr3.4:97289164-97289183 | None:intergenic | 30.0% |
| !!! | ACGCCTAGAAAACATTTTTT+GGG | + | chr3.4:97289436-97289455 | MS.gene064700:intron | 30.0% |
| !!! | CATATCTTGGGTTTTTTGAT+GGG | + | chr3.4:97289236-97289255 | MS.gene064700:CDS | 30.0% |
| !!! | TCATATCTTGGGTTTTTTGA+TGG | + | chr3.4:97289235-97289254 | MS.gene064700:CDS | 30.0% |
| !!! | TGGAAACATTGTCATTTTCA+AGG | + | chr3.4:97290285-97290304 | MS.gene064700:CDS | 30.0% |
| AAATGGACATGACAAGGATA+AGG | + | chr3.4:97290690-97290709 | MS.gene064700:CDS | 35.0% | |
| AACAACGATGTTCGTATTGA+TGG | + | chr3.4:97288705-97288724 | MS.gene064700:CDS | 35.0% | |
| AAGATAAATAGCCGTCATGA+GGG | + | chr3.4:97290667-97290686 | MS.gene064700:CDS | 35.0% | |
| AATGGACATGACAAGGATAA+GGG | + | chr3.4:97290691-97290710 | MS.gene064700:CDS | 35.0% | |
| ACTTCATGGCACAAATAATG+TGG | - | chr3.4:97290420-97290439 | None:intergenic | 35.0% | |
| AGGACTTGGGTTTATCAAAA+AGG | + | chr3.4:97289277-97289296 | MS.gene064700:CDS | 35.0% | |
| AGTGTTAGAATGTGATGAGA+GGG | - | chr3.4:97291535-97291554 | None:intergenic | 35.0% | |
| ATATAGTGATACAGATGAGG+TGG | + | chr3.4:97288569-97288588 | MS.gene064700:CDS | 35.0% | |
| ATCAAATGGACAAAACGCAA+AGG | - | chr3.4:97289140-97289159 | None:intergenic | 35.0% | |
| ATCCATGTTGTCATACTTCA+TGG | - | chr3.4:97290434-97290453 | None:intergenic | 35.0% | |
| ATTTAGTCTGCAACTTGTCA+AGG | - | chr3.4:97290351-97290370 | None:intergenic | 35.0% | |
| CTGAAAAGTTTGAATCTGAG+TGG | + | chr3.4:97289855-97289874 | MS.gene064700:intron | 35.0% | |
| CTTCATGGCACAAATAATGT+GGG | - | chr3.4:97290419-97290438 | None:intergenic | 35.0% | |
| GAAGCTTCAAAGATATTCAC+CGG | + | chr3.4:97290184-97290203 | MS.gene064700:CDS | 35.0% | |
| GAGTTGTGTTTCCAAATACA+AGG | + | chr3.4:97289729-97289748 | MS.gene064700:intron | 35.0% | |
| GATGTGAAACGTGATTCTAA+TGG | + | chr3.4:97288924-97288943 | MS.gene064700:CDS | 35.0% | |
| GCAAGGGTTAAAATACAAGA+TGG | + | chr3.4:97289326-97289345 | MS.gene064700:CDS | 35.0% | |
| GCGTCAATTAGTATGCAATA+AGG | + | chr3.4:97288959-97288978 | MS.gene064700:CDS | 35.0% | |
| GTATGACAAACATCCAAAAG+CGG | + | chr3.4:97289667-97289686 | MS.gene064700:intron | 35.0% | |
| GTGGAATTTAACCATGGTAA+TGG | + | chr3.4:97288741-97288760 | MS.gene064700:CDS | 35.0% | |
| TAACACCATACCCAACATTA+TGG | - | chr3.4:97291440-97291459 | None:intergenic | 35.0% | |
| TAAGATAAATAGCCGTCATG+AGG | + | chr3.4:97290666-97290685 | MS.gene064700:CDS | 35.0% | |
| TATCATTACTCATAGACAGC+TGG | - | chr3.4:97291053-97291072 | None:intergenic | 35.0% | |
| TGCAGAACAATTAGTTCGAA+TGG | - | chr3.4:97289036-97289055 | None:intergenic | 35.0% | |
| TGCTGTAATTAGGCATCAAA+TGG | - | chr3.4:97289154-97289173 | None:intergenic | 35.0% | |
| TTAGAACAACATCTTGTCCT+CGG | - | chr3.4:97290814-97290833 | None:intergenic | 35.0% | |
| ! | AAAGTCTGATTTGCAAGAGA+TGG | + | chr3.4:97290464-97290483 | MS.gene064700:CDS | 35.0% |
| ! | ACACTGATAGTGATACAGAT+GGG | + | chr3.4:97288616-97288635 | MS.gene064700:CDS | 35.0% |
| ! | AGGTTTGACTATGAGTGTTT+TGG | + | chr3.4:97289473-97289492 | MS.gene064700:intron | 35.0% |
| ! | CAAGTTGGAACCATAATGTT+GGG | + | chr3.4:97291427-97291446 | MS.gene064700:CDS | 35.0% |
| ! | CACTCAGATTCAAACTTTTC+AGG | - | chr3.4:97289857-97289876 | None:intergenic | 35.0% |
| ! | CTGCCCAAAAAATGTTTTCT+AGG | - | chr3.4:97289442-97289461 | None:intergenic | 35.0% |
| ! | GCTACTTTGAGTTATTTCCA+AGG | + | chr3.4:97289359-97289378 | MS.gene064700:CDS | 35.0% |
| ! | GTTGATAAACAAGTTGCTAG+TGG | + | chr3.4:97289185-97289204 | MS.gene064700:CDS | 35.0% |
| ! | TAAGAGCGCAAGTGATTATA+AGG | + | chr3.4:97290612-97290631 | MS.gene064700:CDS | 35.0% |
| ! | TTATCGGTTGAAGAGAATGT+GGG | + | chr3.4:97289931-97289950 | MS.gene064700:intron | 35.0% |
| ! | TTTAGTGGATATAACCACCA+TGG | + | chr3.4:97289557-97289576 | MS.gene064700:intron | 35.0% |
| ! | TTTATCGGTTGAAGAGAATG+TGG | + | chr3.4:97289930-97289949 | MS.gene064700:intron | 35.0% |
| ! | TTTTTCATGTCCAAAGTCAC+GGG | - | chr3.4:97291379-97291398 | None:intergenic | 35.0% |
| !! | AATAAGGAGGGTGTTAATGA+TGG | + | chr3.4:97288975-97288994 | MS.gene064700:CDS | 35.0% |
| !! | ATTATAAGGAGGCTCTAGAA+GGG | + | chr3.4:97290626-97290645 | MS.gene064700:CDS | 35.0% |
| !! | CAAAAATGGTTGTTTCTCCA+TGG | - | chr3.4:97289577-97289596 | None:intergenic | 35.0% |
| !! | TGCTGAAAATTGTGTTGCTT+TGG | + | chr3.4:97291300-97291319 | MS.gene064700:intron | 35.0% |
| !!! | AAACCCCTTGTCATTTTTAG+TGG | + | chr3.4:97289542-97289561 | MS.gene064700:intron | 35.0% |
| !!! | GACGCCTAGAAAACATTTTT+TGG | + | chr3.4:97289435-97289454 | MS.gene064700:intron | 35.0% |
| !!! | GGTTTTTTGATGGGTCAAAA+GGG | + | chr3.4:97289245-97289264 | MS.gene064700:CDS | 35.0% |
| !!! | GTGTTGACTTTTTACTCCTA+CGG | - | chr3.4:97290792-97290811 | None:intergenic | 35.0% |
| !!! | TCAAACTTTTCAGGTGTACA+AGG | - | chr3.4:97289848-97289867 | None:intergenic | 35.0% |
| !!! | TGTTGACTTTTTACTCCTAC+GGG | - | chr3.4:97290791-97290810 | None:intergenic | 35.0% |
| AAAAGCGGTGATTACTGATG+GGG | + | chr3.4:97289682-97289701 | MS.gene064700:intron | 40.0% | |
| AAAATGACCATGTTTCGTCG+AGG | + | chr3.4:97290547-97290566 | MS.gene064700:CDS | 40.0% | |
| AAACATCGCAGTGACTATTG+TGG | + | chr3.4:97291719-97291738 | MS.gene064700:CDS | 40.0% | |
| AAATGACCATGTTTCGTCGA+GGG | + | chr3.4:97290548-97290567 | MS.gene064700:CDS | 40.0% | |
| AACATTTCGATGCAAATGCC+AGG | - | chr3.4:97289768-97289787 | None:intergenic | 40.0% | |
| AATGGTGTTTGCAATGAGCA+AGG | + | chr3.4:97288759-97288778 | MS.gene064700:CDS | 40.0% | |
| ACATAGACTATTGAACGCAG+CGG | - | chr3.4:97290581-97290600 | None:intergenic | 40.0% | |
| ACGACTTTGTTCGTACGATT+TGG | + | chr3.4:97289072-97289091 | MS.gene064700:CDS | 40.0% | |
| AGAACGACATCAATCTGTGA+AGG | + | chr3.4:97289992-97290011 | MS.gene064700:intron | 40.0% | |
| AGATGTCAAAAAGGCGATAG+AGG | + | chr3.4:97290219-97290238 | MS.gene064700:CDS | 40.0% | |
| AGTTTGAATCTGAGTGGAAG+AGG | + | chr3.4:97289861-97289880 | MS.gene064700:intron | 40.0% | |
| ATACTCACCGGTGTATAACT+CGG | - | chr3.4:97291585-97291604 | None:intergenic | 40.0% | |
| ATGGTGTTTGCAATGAGCAA+GGG | + | chr3.4:97288760-97288779 | MS.gene064700:CDS | 40.0% | |
| CAAAAGCGGTGATTACTGAT+GGG | + | chr3.4:97289681-97289700 | MS.gene064700:intron | 40.0% | |
| CAAAGGTGATGCCTTGTATT+TGG | - | chr3.4:97289743-97289762 | None:intergenic | 40.0% | |
| CAAGGGAAAGAGAACTTTGA+TGG | + | chr3.4:97288777-97288796 | MS.gene064700:CDS | 40.0% | |
| CAATGTTCCGAGTTATACAC+CGG | + | chr3.4:97291575-97291594 | MS.gene064700:CDS | 40.0% | |
| CACTGGTATTACACGTAAGA+GGG | + | chr3.4:97291131-97291150 | MS.gene064700:CDS | 40.0% | |
| CAGTGTTAGAATGTGATGAG+AGG | - | chr3.4:97291536-97291555 | None:intergenic | 40.0% | |
| CATTGAACGAGATGAAGATG+AGG | + | chr3.4:97290261-97290280 | MS.gene064700:CDS | 40.0% | |
| CATTGCAAACACCATTACCA+TGG | - | chr3.4:97288755-97288774 | None:intergenic | 40.0% | |
| CCTTTCTTACTTCAAACCAG+TGG | - | chr3.4:97288902-97288921 | None:intergenic | 40.0% | |
| CTCTTGCAAATCAGACTTTC+AGG | - | chr3.4:97290463-97290482 | None:intergenic | 40.0% | |
| GCACAAATAATGTGGGAACA+TGG | - | chr3.4:97290412-97290431 | None:intergenic | 40.0% | |
| GGATATGGAATTCAACACAG+AGG | + | chr3.4:97288839-97288858 | MS.gene064700:CDS | 40.0% | |
| GTTTGAATCTGAGTGGAAGA+GGG | + | chr3.4:97289862-97289881 | MS.gene064700:intron | 40.0% | |
| TATCAGTATCAGCCTTACCT+TGG | - | chr3.4:97289379-97289398 | None:intergenic | 40.0% | |
| TATGAGTGCGTTGAAGAATG+TGG | + | chr3.4:97291685-97291704 | MS.gene064700:CDS | 40.0% | |
| TATGGTTCCAACTTGCACAA+TGG | - | chr3.4:97291422-97291441 | None:intergenic | 40.0% | |
| TGACCTATCAAACAACAGGT+GGG | + | chr3.4:97289898-97289917 | MS.gene064700:intron | 40.0% | |
| TGATAAACCCAAGTCCTTCA+TGG | - | chr3.4:97289274-97289293 | None:intergenic | 40.0% | |
| TGCCATGAAGTATGACAACA+TGG | + | chr3.4:97290429-97290448 | MS.gene064700:CDS | 40.0% | |
| TGGAACCATAATGTTGGGTA+TGG | + | chr3.4:97291432-97291451 | MS.gene064700:CDS | 40.0% | |
| TTCATCATTACCTTCTTGGG+AGG | - | chr3.4:97290527-97290546 | None:intergenic | 40.0% | |
| TTCGAATGGTTAGCGTAGAT+CGG | - | chr3.4:97289022-97289041 | None:intergenic | 40.0% | |
| TTGACCTATCAAACAACAGG+TGG | + | chr3.4:97289897-97289916 | MS.gene064700:intron | 40.0% | |
| TTTGGGCAGATTCTACTAGT+AGG | + | chr3.4:97289453-97289472 | MS.gene064700:intron | 40.0% | |
| ! | CACTGATAGTGATACAGATG+GGG | + | chr3.4:97288617-97288636 | MS.gene064700:CDS | 40.0% |
| ! | GACACTGATAGTGATACAGA+TGG | + | chr3.4:97288615-97288634 | MS.gene064700:CDS | 40.0% |
| ! | GCAAGTTGGAACCATAATGT+TGG | + | chr3.4:97291426-97291445 | MS.gene064700:CDS | 40.0% |
| ! | TTACCCACCTGTTGTTTGAT+AGG | - | chr3.4:97289904-97289923 | None:intergenic | 40.0% |
| !! | AAATGGTTGTTTCTCCATGG+TGG | - | chr3.4:97289574-97289593 | None:intergenic | 40.0% |
| !! | CCACTGGTTTGAAGTAAGAA+AGG | + | chr3.4:97288899-97288918 | MS.gene064700:CDS | 40.0% |
| !! | GATTATAAGGAGGCTCTAGA+AGG | + | chr3.4:97290625-97290644 | MS.gene064700:CDS | 40.0% |
| !! | TTTTTGATGGGTCAAAAGGG+TGG | + | chr3.4:97289248-97289267 | MS.gene064700:CDS | 40.0% |
| !!! | ATGCGAGACCATTTTTTGTG+TGG | + | chr3.4:97289965-97289984 | MS.gene064700:intron | 40.0% |
| !!! | CCACAAGGCTATTTTTGTGT+CGG | - | chr3.4:97290045-97290064 | None:intergenic | 40.0% |
| !!! | GGGTTTTTTGATGGGTCAAA+AGG | + | chr3.4:97289244-97289263 | MS.gene064700:CDS | 40.0% |
| AACGCAAAGGAGCTAATTCG+TGG | - | chr3.4:97289127-97289146 | None:intergenic | 45.0% | |
| AAGACAGCCATTGTGCAAGT+TGG | + | chr3.4:97291412-97291431 | MS.gene064700:CDS | 45.0% | |
| AATAGCCGTCATGAGGGAAA+TGG | + | chr3.4:97290673-97290692 | MS.gene064700:CDS | 45.0% | |
| AATGACCATGTTTCGTCGAG+GGG | + | chr3.4:97290549-97290568 | MS.gene064700:CDS | 45.0% | |
| ACACCAATTCCAGCAAGTTC+TGG | - | chr3.4:97290871-97290890 | None:intergenic | 45.0% | |
| AGCTAATTCGTGGTTGTGAG+AGG | - | chr3.4:97289117-97289136 | None:intergenic | 45.0% | |
| ATTTCACGGATCATCAGGCA+AGG | + | chr3.4:97289309-97289328 | MS.gene064700:CDS | 45.0% | |
| CACTCTGTAGCAGTGTCAAA+TGG | + | chr3.4:97291087-97291106 | MS.gene064700:CDS | 45.0% | |
| CATGTCCATTTCCCTCATGA+CGG | - | chr3.4:97290681-97290700 | None:intergenic | 45.0% | |
| CATTTGACACTGCTACAGAG+TGG | - | chr3.4:97291089-97291108 | None:intergenic | 45.0% | |
| CCAAAAGCGGTGATTACTGA+TGG | + | chr3.4:97289680-97289699 | MS.gene064700:intron | 45.0% | |
| CCTTTGACATTCACCATCAG+TGG | - | chr3.4:97290766-97290785 | None:intergenic | 45.0% | |
| GAAATCCTGGGCACACAATA+CGG | + | chr3.4:97290839-97290858 | MS.gene064700:CDS | 45.0% | |
| GAACGAGATGAAGATGAGGA+TGG | + | chr3.4:97290265-97290284 | MS.gene064700:CDS | 45.0% | |
| GACGGTGTGGAATTTAACCA+TGG | + | chr3.4:97288735-97288754 | MS.gene064700:CDS | 45.0% | |
| GAGCGCAAGTGATTATAAGG+AGG | + | chr3.4:97290615-97290634 | MS.gene064700:CDS | 45.0% | |
| GCTAATTCGTGGTTGTGAGA+GGG | - | chr3.4:97289116-97289135 | None:intergenic | 45.0% | |
| GGAGTAAAAAGTCAACACCG+AGG | + | chr3.4:97290794-97290813 | MS.gene064700:CDS | 45.0% | |
| GTCAATGCAGTTGTCAGCAT+AGG | - | chr3.4:97290151-97290170 | None:intergenic | 45.0% | |
| GTGTCGTGTCTGAAGATCAA+GGG | + | chr3.4:97290887-97290906 | MS.gene064700:CDS | 45.0% | |
| TCTAACACTGCTCTGCATAC+TGG | + | chr3.4:97291546-97291565 | MS.gene064700:CDS | 45.0% | |
| TCTGTAGCAGTGTCAAATGG+TGG | + | chr3.4:97291090-97291109 | MS.gene064700:CDS | 45.0% | |
| TGAGGGAAATGGACATGACA+AGG | + | chr3.4:97290684-97290703 | MS.gene064700:CDS | 45.0% | |
| TGTCGTGTCTGAAGATCAAG+GGG | + | chr3.4:97290888-97290907 | MS.gene064700:CDS | 45.0% | |
| TGTGATGAGAGGGTAGTTGT+CGG | - | chr3.4:97291525-97291544 | None:intergenic | 45.0% | |
| TGTTGCGAATGATCCACTGA+TGG | + | chr3.4:97290750-97290769 | MS.gene064700:CDS | 45.0% | |
| TTTCACGGATCATCAGGCAA+GGG | + | chr3.4:97289310-97289329 | MS.gene064700:CDS | 45.0% | |
| ! | CACTATGGGCTGCCAAATAA+TGG | + | chr3.4:97291474-97291493 | MS.gene064700:CDS | 45.0% |
| ! | CCACTGATGGTGAATGTCAA+AGG | + | chr3.4:97290763-97290782 | MS.gene064700:CDS | 45.0% |
| ! | CCATCAGTAATCACCGCTTT+TGG | - | chr3.4:97289683-97289702 | None:intergenic | 45.0% |
| ! | CCGACACAAAAATAGCCTTG+TGG | + | chr3.4:97290042-97290061 | MS.gene064700:CDS | 45.0% |
| ! | CGAGATGTTGAGAAAAGCAC+TGG | + | chr3.4:97291114-97291133 | MS.gene064700:CDS | 45.0% |
| ! | CGTATTGATGGAGATGCAGA+CGG | + | chr3.4:97288717-97288736 | MS.gene064700:CDS | 45.0% |
| ! | GCACTGGTATTACACGTAAG+AGG | + | chr3.4:97291130-97291149 | MS.gene064700:CDS | 45.0% |
| ! | TATGGGCTGCCAAATAATGG+TGG | + | chr3.4:97291477-97291496 | MS.gene064700:CDS | 45.0% |
| ! | TGATAGTGATACAGATGGGG+TGG | + | chr3.4:97288620-97288639 | MS.gene064700:CDS | 45.0% |
| !! | TGTCCAGAACTTGCTGGAAT+TGG | + | chr3.4:97290865-97290884 | MS.gene064700:CDS | 45.0% |
| AATGGTGTGACCCGTGACTT+TGG | + | chr3.4:97291366-97291385 | MS.gene064700:CDS | 50.0% | |
| ATGAGAGGGTAGTTGTCGGA+GGG | - | chr3.4:97291521-97291540 | None:intergenic | 50.0% | |
| GCTAGTGGTCTACATTCGCA+AGG | + | chr3.4:97289200-97289219 | MS.gene064700:CDS | 50.0% | |
| GTAGTTGTCGGAGGGAATTG+TGG | - | chr3.4:97291513-97291532 | None:intergenic | 50.0% | |
| GTCTGAAGATCAAGGGGAGA+AGG | + | chr3.4:97290894-97290913 | MS.gene064700:CDS | 50.0% | |
| TCGTCATTTGCCTCCCAAGA+AGG | + | chr3.4:97290514-97290533 | MS.gene064700:CDS | 50.0% | |
| ! | GGTGTCGTGTCTGAAGATCA+AGG | + | chr3.4:97290886-97290905 | MS.gene064700:CDS | 50.0% |
| ! | TGTAGACGCTTTGAACGCAG+AGG | + | chr3.4:97290382-97290401 | MS.gene064700:CDS | 50.0% |
| !! | TGAATGTCAAAGGTGCCCGT+AGG | + | chr3.4:97290773-97290792 | MS.gene064700:CDS | 50.0% |
| AAGGGTGGCCATGAAGGACT+TGG | + | chr3.4:97289263-97289282 | MS.gene064700:CDS | 55.0% | |
| AAGTGCCCCTCGACGAAACA+TGG | - | chr3.4:97290557-97290576 | None:intergenic | 55.0% | |
| AGGGTGGCCATGAAGGACTT+GGG | + | chr3.4:97289264-97289283 | MS.gene064700:CDS | 55.0% | |
| GATGAGAGGGTAGTTGTCGG+AGG | - | chr3.4:97291522-97291541 | None:intergenic | 55.0% | |
| GATGCAAATGCCAGGCGCAA+AGG | - | chr3.4:97289760-97289779 | None:intergenic | 55.0% | |
| GGTCAAAAGGGTGGCCATGA+AGG | + | chr3.4:97289257-97289276 | MS.gene064700:CDS | 55.0% | |
| TGATGGAGATGCAGACGGTG+TGG | + | chr3.4:97288722-97288741 | MS.gene064700:CDS | 55.0% | |
| CACGTCCGTATTGTGTGCCC+AGG | - | chr3.4:97290847-97290866 | None:intergenic | 60.0% | |
| CGGACGTGTCCAGAACTTGC+TGG | + | chr3.4:97290859-97290878 | MS.gene064700:CDS | 60.0% | |
| ! | CAAGGCATCACCTTTGCGCC+TGG | + | chr3.4:97289747-97289766 | MS.gene064700:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97288531 | 97291754 | 97288531 | ID=MS.gene064700 |
| chr3.4 | mRNA | 97288531 | 97291754 | 97288531 | ID=MS.gene064700.t1;Parent=MS.gene064700 |
| chr3.4 | exon | 97288531 | 97289380 | 97288531 | ID=MS.gene064700.t1.exon1;Parent=MS.gene064700.t1 |
| chr3.4 | CDS | 97288531 | 97289380 | 97288531 | ID=cds.MS.gene064700.t1;Parent=MS.gene064700.t1 |
| chr3.4 | exon | 97290017 | 97290957 | 97290017 | ID=MS.gene064700.t1.exon2;Parent=MS.gene064700.t1 |
| chr3.4 | CDS | 97290017 | 97290957 | 97290017 | ID=cds.MS.gene064700.t1;Parent=MS.gene064700.t1 |
| chr3.4 | exon | 97291054 | 97291275 | 97291054 | ID=MS.gene064700.t1.exon3;Parent=MS.gene064700.t1 |
| chr3.4 | CDS | 97291054 | 97291275 | 97291054 | ID=cds.MS.gene064700.t1;Parent=MS.gene064700.t1 |
| chr3.4 | exon | 97291366 | 97291596 | 97291366 | ID=MS.gene064700.t1.exon4;Parent=MS.gene064700.t1 |
| chr3.4 | CDS | 97291366 | 97291596 | 97291366 | ID=cds.MS.gene064700.t1;Parent=MS.gene064700.t1 |
| chr3.4 | exon | 97291683 | 97291754 | 97291683 | ID=MS.gene064700.t1.exon5;Parent=MS.gene064700.t1 |
| chr3.4 | CDS | 97291683 | 97291754 | 97291683 | ID=cds.MS.gene064700.t1;Parent=MS.gene064700.t1 |
| Gene Sequence |
| Protein sequence |
