Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064722.t1 | XP_003603721.1 | 100 | 229 | 0 | 0 | 1 | 229 | 1 | 229 | 4.10E-123 | 450.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064722.t1 | E0CPH4 | 69.5 | 223 | 66 | 1 | 1 | 223 | 1 | 221 | 9.8e-81 | 301.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064722.t1 | G7J4N1 | 100.0 | 229 | 0 | 0 | 1 | 229 | 1 | 229 | 3.0e-123 | 450.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene064722.t1 | TF | MADS-MIKC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064722.t1 | MTR_3g113030 | 100.000 | 229 | 0 | 0 | 1 | 229 | 1 | 229 | 6.14e-175 | 479 |
| MS.gene064722.t1 | MTR_5g021270 | 54.091 | 220 | 95 | 4 | 1 | 215 | 1 | 219 | 1.75e-75 | 228 |
| MS.gene064722.t1 | MTR_5g021270 | 53.846 | 221 | 95 | 5 | 1 | 215 | 1 | 220 | 3.70e-74 | 224 |
| MS.gene064722.t1 | MTR_3g088615 | 45.775 | 142 | 77 | 0 | 1 | 142 | 1 | 142 | 8.75e-44 | 145 |
| MS.gene064722.t1 | MTR_1g029670 | 43.662 | 142 | 80 | 0 | 1 | 142 | 1 | 142 | 4.31e-39 | 133 |
| MS.gene064722.t1 | MTR_7g075850 | 34.874 | 238 | 126 | 6 | 1 | 228 | 1 | 219 | 2.87e-35 | 125 |
| MS.gene064722.t1 | MTR_2g009890 | 41.463 | 164 | 80 | 3 | 1 | 155 | 1 | 157 | 1.75e-34 | 124 |
| MS.gene064722.t1 | MTR_2g017865 | 39.801 | 201 | 102 | 5 | 1 | 187 | 16 | 211 | 1.40e-32 | 119 |
| MS.gene064722.t1 | MTR_8g087860 | 42.424 | 165 | 89 | 3 | 1 | 162 | 17 | 178 | 1.90e-32 | 118 |
| MS.gene064722.t1 | MTR_4g102530 | 42.581 | 155 | 78 | 3 | 1 | 148 | 1 | 151 | 2.14e-32 | 117 |
| MS.gene064722.t1 | MTR_7g075870 | 43.030 | 165 | 80 | 4 | 1 | 156 | 1 | 160 | 2.55e-32 | 117 |
| MS.gene064722.t1 | MTR_8g033270 | 35.443 | 237 | 125 | 7 | 1 | 228 | 1 | 218 | 3.78e-32 | 117 |
| MS.gene064722.t1 | MTR_3g084980 | 42.138 | 159 | 86 | 2 | 1 | 153 | 1 | 159 | 1.35e-31 | 116 |
| MS.gene064722.t1 | MTR_8g033220 | 41.250 | 160 | 84 | 3 | 1 | 153 | 1 | 157 | 1.83e-31 | 115 |
| MS.gene064722.t1 | MTR_3g452380 | 38.857 | 175 | 91 | 4 | 1 | 166 | 16 | 183 | 1.87e-31 | 115 |
| MS.gene064722.t1 | MTR_8g033220 | 41.250 | 160 | 84 | 3 | 1 | 153 | 1 | 157 | 2.01e-31 | 115 |
| MS.gene064722.t1 | MTR_7g075870 | 41.818 | 165 | 81 | 4 | 1 | 156 | 1 | 159 | 4.39e-31 | 114 |
| MS.gene064722.t1 | MTR_4g109830 | 42.353 | 170 | 91 | 3 | 1 | 165 | 1 | 168 | 6.39e-31 | 114 |
| MS.gene064722.t1 | MTR_7g016630 | 39.205 | 176 | 89 | 4 | 1 | 166 | 1 | 168 | 9.21e-31 | 114 |
| MS.gene064722.t1 | MTR_3g005530 | 37.576 | 165 | 82 | 3 | 1 | 153 | 1 | 156 | 1.31e-30 | 113 |
| MS.gene064722.t1 | MTR_5g046790 | 39.429 | 175 | 96 | 3 | 1 | 168 | 1 | 172 | 3.29e-30 | 111 |
| MS.gene064722.t1 | MTR_8g097090 | 43.396 | 159 | 84 | 3 | 1 | 153 | 1 | 159 | 4.19e-30 | 112 |
| MS.gene064722.t1 | MTR_5g031000 | 38.854 | 157 | 77 | 3 | 1 | 147 | 1 | 148 | 4.83e-30 | 111 |
| MS.gene064722.t1 | MTR_5g031000 | 38.854 | 157 | 77 | 3 | 1 | 147 | 1 | 148 | 8.14e-30 | 111 |
| MS.gene064722.t1 | MTR_7g016600 | 42.405 | 158 | 85 | 3 | 1 | 153 | 1 | 157 | 2.38e-29 | 110 |
| MS.gene064722.t1 | MTR_8g066260 | 40.854 | 164 | 79 | 5 | 1 | 153 | 1 | 157 | 3.56e-29 | 109 |
| MS.gene064722.t1 | MTR_1g038300 | 35.404 | 161 | 96 | 1 | 1 | 153 | 1 | 161 | 5.84e-29 | 108 |
| MS.gene064722.t1 | MTR_6g015975 | 41.139 | 158 | 87 | 3 | 1 | 153 | 1 | 157 | 1.65e-28 | 108 |
| MS.gene064722.t1 | MTR_6g464720 | 38.235 | 170 | 98 | 2 | 1 | 164 | 1 | 169 | 3.42e-28 | 107 |
| MS.gene064722.t1 | MTR_5g032520 | 41.436 | 181 | 87 | 5 | 1 | 170 | 1 | 173 | 1.89e-27 | 105 |
| MS.gene064722.t1 | MTR_1g053070 | 37.500 | 168 | 78 | 4 | 1 | 151 | 1 | 158 | 7.36e-27 | 103 |
| MS.gene064722.t1 | MTR_4g036050 | 35.632 | 174 | 104 | 4 | 1 | 168 | 1 | 172 | 5.14e-26 | 100 |
| MS.gene064722.t1 | MTR_4g036050 | 33.161 | 193 | 117 | 4 | 1 | 187 | 1 | 187 | 5.37e-26 | 100 |
| MS.gene064722.t1 | MTR_4g109810 | 38.411 | 151 | 89 | 2 | 1 | 148 | 1 | 150 | 6.43e-26 | 101 |
| MS.gene064722.t1 | MTR_5g032150 | 42.073 | 164 | 75 | 5 | 1 | 152 | 1 | 156 | 1.38e-25 | 100 |
| MS.gene064722.t1 | MTR_1g101970 | 33.529 | 170 | 105 | 2 | 1 | 164 | 1 | 168 | 9.15e-25 | 97.1 |
| MS.gene064722.t1 | MTR_4g093970 | 38.462 | 169 | 77 | 4 | 1 | 153 | 27 | 184 | 9.39e-25 | 98.2 |
| MS.gene064722.t1 | MTR_5g066180 | 39.752 | 161 | 82 | 4 | 1 | 153 | 1 | 154 | 1.96e-24 | 97.1 |
| MS.gene064722.t1 | MTR_5g066960 | 65.000 | 60 | 21 | 0 | 1 | 60 | 1 | 60 | 7.92e-24 | 90.5 |
| MS.gene064722.t1 | MTR_5g046870 | 56.944 | 72 | 30 | 1 | 1 | 72 | 1 | 71 | 2.47e-23 | 90.9 |
| MS.gene064722.t1 | MTR_4g036050 | 37.241 | 145 | 84 | 3 | 1 | 139 | 1 | 144 | 5.49e-23 | 92.0 |
| MS.gene064722.t1 | MTR_4g036050 | 37.241 | 145 | 84 | 3 | 1 | 139 | 1 | 144 | 6.41e-23 | 92.0 |
| MS.gene064722.t1 | MTR_0003s0590 | 38.994 | 159 | 86 | 3 | 1 | 151 | 1 | 156 | 9.31e-23 | 93.2 |
| MS.gene064722.t1 | MTR_2g461710 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.07e-22 | 87.8 |
| MS.gene064722.t1 | MTR_4g093030 | 66.667 | 60 | 20 | 0 | 1 | 60 | 1 | 60 | 2.10e-21 | 87.4 |
| MS.gene064722.t1 | MTR_3g102570 | 42.400 | 125 | 62 | 4 | 1 | 122 | 1 | 118 | 2.86e-19 | 85.1 |
| MS.gene064722.t1 | MTR_8g086290 | 40.157 | 127 | 60 | 3 | 2 | 127 | 12 | 123 | 1.21e-18 | 80.5 |
| MS.gene064722.t1 | MTR_4g084740 | 63.158 | 57 | 21 | 0 | 1 | 57 | 1 | 57 | 2.07e-18 | 82.8 |
| MS.gene064722.t1 | MTR_1g041615 | 60.000 | 55 | 22 | 0 | 13 | 67 | 17 | 71 | 1.82e-17 | 76.3 |
| MS.gene064722.t1 | MTR_8g051580 | 36.691 | 139 | 81 | 3 | 1 | 133 | 1 | 138 | 4.32e-17 | 76.6 |
| MS.gene064722.t1 | MTR_2g105290 | 35.443 | 158 | 81 | 7 | 1 | 143 | 11 | 162 | 4.14e-16 | 73.6 |
| MS.gene064722.t1 | MTR_4g094632 | 33.333 | 135 | 69 | 4 | 1 | 135 | 1 | 114 | 1.94e-15 | 71.6 |
| MS.gene064722.t1 | MTR_4g108720 | 56.604 | 53 | 23 | 0 | 1 | 53 | 1 | 53 | 7.32e-15 | 72.8 |
| MS.gene064722.t1 | MTR_1g054265 | 48.387 | 62 | 32 | 0 | 1 | 62 | 1 | 62 | 7.33e-15 | 70.1 |
| MS.gene064722.t1 | MTR_8g079502 | 48.387 | 62 | 32 | 0 | 1 | 62 | 1 | 62 | 7.96e-15 | 70.5 |
| MS.gene064722.t1 | MTR_7g028448 | 39.669 | 121 | 55 | 5 | 14 | 121 | 24 | 139 | 1.11e-14 | 69.7 |
| MS.gene064722.t1 | MTR_4g036915 | 39.669 | 121 | 55 | 5 | 14 | 121 | 24 | 139 | 1.11e-14 | 69.7 |
| MS.gene064722.t1 | MTR_3g030770 | 33.835 | 133 | 74 | 3 | 2 | 133 | 9 | 128 | 1.38e-14 | 70.9 |
| MS.gene064722.t1 | MTR_1g108580 | 49.206 | 63 | 32 | 0 | 2 | 64 | 9 | 71 | 1.44e-14 | 70.5 |
| MS.gene064722.t1 | MTR_2g093190 | 34.400 | 125 | 71 | 4 | 2 | 119 | 9 | 129 | 1.87e-14 | 70.5 |
| MS.gene064722.t1 | MTR_1g108510 | 47.619 | 63 | 33 | 0 | 2 | 64 | 9 | 71 | 2.01e-14 | 70.1 |
| MS.gene064722.t1 | MTR_1g047550 | 48.387 | 62 | 32 | 0 | 1 | 62 | 1 | 62 | 2.27e-14 | 68.9 |
| MS.gene064722.t1 | MTR_2g085280 | 28.249 | 177 | 99 | 4 | 2 | 154 | 9 | 181 | 2.35e-14 | 70.1 |
| MS.gene064722.t1 | MTR_2g085250 | 28.249 | 177 | 99 | 4 | 2 | 154 | 9 | 181 | 2.52e-14 | 70.1 |
| MS.gene064722.t1 | MTR_8g046350 | 47.222 | 72 | 36 | 1 | 1 | 70 | 1 | 72 | 2.72e-14 | 68.6 |
| MS.gene064722.t1 | MTR_5g041650 | 56.604 | 53 | 23 | 0 | 1 | 53 | 38 | 90 | 2.80e-14 | 71.6 |
| MS.gene064722.t1 | MTR_1g063160 | 46.774 | 62 | 33 | 0 | 1 | 62 | 1 | 62 | 3.06e-14 | 68.9 |
| MS.gene064722.t1 | MTR_3g052920 | 54.237 | 59 | 27 | 0 | 2 | 60 | 9 | 67 | 5.10e-14 | 69.3 |
| MS.gene064722.t1 | MTR_5g045560 | 48.438 | 64 | 33 | 0 | 1 | 64 | 8 | 71 | 6.96e-14 | 68.9 |
| MS.gene064722.t1 | MTR_1g012570 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 9.99e-14 | 68.6 |
| MS.gene064722.t1 | MTR_1g077360 | 45.714 | 70 | 36 | 1 | 2 | 71 | 9 | 76 | 1.08e-13 | 68.6 |
| MS.gene064722.t1 | MTR_2g030740 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 1.14e-13 | 68.2 |
| MS.gene064722.t1 | MTR_1g075600 | 47.619 | 63 | 33 | 0 | 2 | 64 | 9 | 71 | 1.46e-13 | 68.2 |
| MS.gene064722.t1 | MTR_4g094638 | 41.892 | 74 | 41 | 1 | 1 | 72 | 1 | 74 | 1.47e-13 | 67.0 |
| MS.gene064722.t1 | MTR_3g052870 | 45.714 | 70 | 36 | 1 | 2 | 71 | 9 | 76 | 1.57e-13 | 67.8 |
| MS.gene064722.t1 | MTR_1g105910 | 47.619 | 63 | 33 | 0 | 2 | 64 | 9 | 71 | 1.67e-13 | 67.8 |
| MS.gene064722.t1 | MTR_1g105920 | 45.714 | 70 | 36 | 1 | 2 | 71 | 9 | 76 | 2.06e-13 | 67.8 |
| MS.gene064722.t1 | MTR_8g043650 | 47.619 | 63 | 33 | 0 | 2 | 64 | 9 | 71 | 2.61e-13 | 67.4 |
| MS.gene064722.t1 | MTR_4g131030 | 46.667 | 60 | 32 | 0 | 1 | 60 | 1 | 60 | 3.29e-13 | 66.6 |
| MS.gene064722.t1 | MTR_5g055100 | 47.619 | 63 | 33 | 0 | 2 | 64 | 9 | 71 | 3.63e-13 | 67.0 |
| MS.gene064722.t1 | MTR_0121s0100 | 44.444 | 63 | 35 | 0 | 2 | 64 | 9 | 71 | 4.28e-13 | 64.7 |
| MS.gene064722.t1 | MTR_5g053390 | 45.714 | 70 | 36 | 1 | 2 | 71 | 9 | 76 | 4.53e-13 | 66.6 |
| MS.gene064722.t1 | MTR_1g106070 | 44.286 | 70 | 37 | 1 | 2 | 71 | 9 | 76 | 6.11e-13 | 65.5 |
| MS.gene064722.t1 | MTR_6g018920 | 27.815 | 151 | 95 | 4 | 1 | 138 | 1 | 150 | 6.58e-12 | 64.3 |
| MS.gene064722.t1 | MTR_3g080940 | 40.845 | 71 | 40 | 1 | 1 | 71 | 8 | 76 | 7.82e-12 | 62.8 |
| MS.gene064722.t1 | MTR_3g067875 | 50.000 | 54 | 27 | 0 | 11 | 64 | 1 | 54 | 8.58e-12 | 59.3 |
| MS.gene064722.t1 | MTR_0121s0080 | 46.667 | 60 | 32 | 0 | 5 | 64 | 12 | 71 | 9.64e-12 | 62.8 |
| MS.gene064722.t1 | MTR_1g105905 | 26.506 | 166 | 98 | 3 | 11 | 154 | 1 | 164 | 2.84e-11 | 61.2 |
| MS.gene064722.t1 | MTR_3g030780 | 39.189 | 74 | 43 | 1 | 2 | 75 | 9 | 80 | 3.83e-11 | 59.3 |
| MS.gene064722.t1 | MTR_8g022970 | 30.216 | 139 | 76 | 4 | 3 | 121 | 19 | 156 | 4.18e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064722.t1 | AT3G54340 | 56.897 | 232 | 95 | 2 | 1 | 228 | 1 | 231 | 7.29e-94 | 275 |
| MS.gene064722.t1 | AT5G20240 | 36.019 | 211 | 120 | 2 | 1 | 210 | 1 | 197 | 5.20e-40 | 137 |
| MS.gene064722.t1 | AT5G20240 | 43.662 | 142 | 80 | 0 | 1 | 142 | 1 | 142 | 1.04e-37 | 129 |
| MS.gene064722.t1 | AT4G18960 | 35.537 | 242 | 134 | 7 | 2 | 228 | 18 | 252 | 4.87e-36 | 128 |
| MS.gene064722.t1 | AT5G60910 | 44.068 | 177 | 91 | 3 | 1 | 171 | 1 | 175 | 3.82e-35 | 125 |
| MS.gene064722.t1 | AT4G11880 | 43.750 | 160 | 79 | 4 | 1 | 153 | 1 | 156 | 1.04e-33 | 119 |
| MS.gene064722.t1 | AT4G11880 | 43.750 | 160 | 79 | 4 | 1 | 153 | 1 | 156 | 1.04e-33 | 119 |
| MS.gene064722.t1 | AT5G13790 | 44.767 | 172 | 81 | 5 | 1 | 166 | 1 | 164 | 1.40e-33 | 122 |
| MS.gene064722.t1 | AT4G11880 | 46.000 | 150 | 70 | 4 | 1 | 143 | 1 | 146 | 2.65e-33 | 120 |
| MS.gene064722.t1 | AT4G11880 | 46.000 | 150 | 70 | 4 | 1 | 143 | 1 | 146 | 2.65e-33 | 120 |
| MS.gene064722.t1 | AT2G45660 | 42.515 | 167 | 71 | 3 | 1 | 153 | 1 | 156 | 2.82e-33 | 118 |
| MS.gene064722.t1 | AT2G45660 | 42.515 | 167 | 71 | 3 | 1 | 153 | 1 | 156 | 1.59e-32 | 117 |
| MS.gene064722.t1 | AT2G45650 | 34.188 | 234 | 132 | 6 | 1 | 228 | 1 | 218 | 4.18e-32 | 117 |
| MS.gene064722.t1 | AT4G22950 | 41.290 | 155 | 79 | 4 | 1 | 148 | 1 | 150 | 5.68e-32 | 115 |
| MS.gene064722.t1 | AT4G09960 | 38.650 | 163 | 83 | 3 | 1 | 153 | 1 | 156 | 7.90e-32 | 116 |
| MS.gene064722.t1 | AT4G09960 | 38.650 | 163 | 83 | 3 | 1 | 153 | 2 | 157 | 8.19e-32 | 116 |
| MS.gene064722.t1 | AT5G13790 | 43.195 | 169 | 85 | 4 | 1 | 166 | 1 | 161 | 1.06e-31 | 117 |
| MS.gene064722.t1 | AT4G09960 | 38.650 | 163 | 83 | 3 | 1 | 153 | 11 | 166 | 1.21e-31 | 116 |
| MS.gene064722.t1 | AT4G09960 | 38.650 | 163 | 83 | 3 | 1 | 153 | 27 | 182 | 1.75e-31 | 116 |
| MS.gene064722.t1 | AT4G22950 | 41.290 | 155 | 79 | 4 | 1 | 148 | 1 | 150 | 1.87e-31 | 115 |
| MS.gene064722.t1 | AT4G22950 | 41.290 | 155 | 79 | 4 | 1 | 148 | 1 | 150 | 1.87e-31 | 115 |
| MS.gene064722.t1 | AT3G57230 | 43.333 | 150 | 65 | 3 | 1 | 139 | 1 | 141 | 2.44e-31 | 112 |
| MS.gene064722.t1 | AT3G57230 | 40.361 | 166 | 79 | 3 | 1 | 155 | 1 | 157 | 3.07e-31 | 115 |
| MS.gene064722.t1 | AT3G57230 | 40.361 | 166 | 79 | 3 | 1 | 155 | 1 | 157 | 3.07e-31 | 115 |
| MS.gene064722.t1 | AT5G51870 | 38.547 | 179 | 94 | 7 | 1 | 169 | 1 | 173 | 4.51e-31 | 114 |
| MS.gene064722.t1 | AT4G37940 | 39.759 | 166 | 80 | 3 | 1 | 155 | 1 | 157 | 6.69e-31 | 114 |
| MS.gene064722.t1 | AT2G42830 | 39.130 | 161 | 87 | 3 | 1 | 154 | 16 | 172 | 1.46e-30 | 113 |
| MS.gene064722.t1 | AT2G42830 | 39.375 | 160 | 86 | 3 | 1 | 153 | 16 | 171 | 1.55e-30 | 113 |
| MS.gene064722.t1 | AT5G23260 | 36.410 | 195 | 119 | 2 | 1 | 190 | 1 | 195 | 1.61e-30 | 113 |
| MS.gene064722.t1 | AT5G51870 | 39.053 | 169 | 90 | 6 | 1 | 162 | 1 | 163 | 1.70e-30 | 112 |
| MS.gene064722.t1 | AT5G51870 | 38.983 | 177 | 92 | 7 | 1 | 167 | 11 | 181 | 1.82e-30 | 112 |
| MS.gene064722.t1 | AT4G09960 | 38.415 | 164 | 84 | 3 | 1 | 154 | 96 | 252 | 1.99e-30 | 115 |
| MS.gene064722.t1 | AT5G23260 | 36.410 | 195 | 119 | 2 | 1 | 190 | 17 | 211 | 2.61e-30 | 113 |
| MS.gene064722.t1 | AT4G09960 | 40.940 | 149 | 71 | 3 | 1 | 139 | 1 | 142 | 3.32e-30 | 112 |
| MS.gene064722.t1 | AT3G58780 | 38.750 | 160 | 87 | 3 | 1 | 153 | 16 | 171 | 4.39e-30 | 112 |
| MS.gene064722.t1 | AT3G58780 | 38.750 | 160 | 87 | 3 | 1 | 153 | 22 | 177 | 4.66e-30 | 112 |
| MS.gene064722.t1 | AT5G51870 | 39.490 | 157 | 77 | 6 | 1 | 146 | 1 | 150 | 5.96e-30 | 110 |
| MS.gene064722.t1 | AT3G61120 | 35.909 | 220 | 113 | 6 | 1 | 210 | 1 | 202 | 1.03e-29 | 111 |
| MS.gene064722.t1 | AT4G37940 | 40.244 | 164 | 77 | 4 | 1 | 152 | 1 | 155 | 1.03e-29 | 110 |
| MS.gene064722.t1 | AT4G24540 | 37.113 | 194 | 114 | 3 | 1 | 189 | 1 | 191 | 1.10e-29 | 110 |
| MS.gene064722.t1 | AT5G15800 | 43.396 | 159 | 83 | 4 | 1 | 153 | 1 | 158 | 1.26e-29 | 111 |
| MS.gene064722.t1 | AT5G23260 | 41.379 | 145 | 83 | 1 | 1 | 143 | 1 | 145 | 1.73e-29 | 110 |
| MS.gene064722.t1 | AT5G15800 | 43.396 | 159 | 83 | 4 | 1 | 153 | 1 | 158 | 1.84e-29 | 111 |
| MS.gene064722.t1 | AT4G37940 | 41.333 | 150 | 68 | 3 | 1 | 139 | 1 | 141 | 1.95e-29 | 108 |
| MS.gene064722.t1 | AT5G51870 | 39.490 | 157 | 77 | 6 | 1 | 146 | 24 | 173 | 1.98e-29 | 109 |
| MS.gene064722.t1 | AT3G58780 | 39.869 | 153 | 88 | 2 | 1 | 153 | 16 | 164 | 3.15e-29 | 110 |
| MS.gene064722.t1 | AT3G02310 | 43.046 | 151 | 82 | 2 | 1 | 147 | 1 | 151 | 4.09e-29 | 108 |
| MS.gene064722.t1 | AT3G02310 | 43.038 | 158 | 85 | 3 | 1 | 153 | 1 | 158 | 5.70e-29 | 109 |
| MS.gene064722.t1 | AT5G23260 | 41.667 | 144 | 82 | 1 | 1 | 142 | 17 | 160 | 8.13e-29 | 109 |
| MS.gene064722.t1 | AT3G58780 | 41.216 | 148 | 76 | 3 | 1 | 141 | 16 | 159 | 8.33e-29 | 109 |
| MS.gene064722.t1 | AT1G24260 | 42.593 | 162 | 82 | 5 | 1 | 153 | 1 | 160 | 2.97e-28 | 107 |
| MS.gene064722.t1 | AT1G24260 | 37.870 | 169 | 82 | 4 | 1 | 154 | 1 | 161 | 3.66e-28 | 107 |
| MS.gene064722.t1 | AT3G30260 | 40.523 | 153 | 83 | 4 | 1 | 147 | 1 | 151 | 5.58e-28 | 107 |
| MS.gene064722.t1 | AT2G22630 | 37.195 | 164 | 87 | 3 | 1 | 155 | 1 | 157 | 5.98e-28 | 106 |
| MS.gene064722.t1 | AT2G22630 | 37.195 | 164 | 87 | 3 | 1 | 155 | 1 | 157 | 5.98e-28 | 106 |
| MS.gene064722.t1 | AT1G24260 | 39.053 | 169 | 79 | 5 | 1 | 153 | 1 | 161 | 6.34e-28 | 107 |
| MS.gene064722.t1 | AT2G03710 | 37.748 | 151 | 90 | 1 | 1 | 147 | 1 | 151 | 9.51e-28 | 104 |
| MS.gene064722.t1 | AT2G03710 | 36.943 | 157 | 95 | 1 | 1 | 153 | 1 | 157 | 9.79e-28 | 106 |
| MS.gene064722.t1 | AT2G14210 | 40.506 | 158 | 75 | 3 | 1 | 147 | 1 | 150 | 1.09e-27 | 105 |
| MS.gene064722.t1 | AT2G03710 | 36.943 | 157 | 95 | 1 | 1 | 153 | 1 | 157 | 1.12e-27 | 106 |
| MS.gene064722.t1 | AT2G14210 | 40.506 | 158 | 75 | 3 | 1 | 147 | 1 | 150 | 1.24e-27 | 105 |
| MS.gene064722.t1 | AT1G26310 | 37.288 | 177 | 105 | 2 | 1 | 171 | 1 | 177 | 2.37e-27 | 105 |
| MS.gene064722.t1 | AT1G69120 | 41.250 | 160 | 84 | 4 | 1 | 153 | 1 | 157 | 2.69e-27 | 104 |
| MS.gene064722.t1 | AT1G69120 | 41.250 | 160 | 84 | 4 | 1 | 153 | 1 | 157 | 3.46e-27 | 105 |
| MS.gene064722.t1 | AT5G62165 | 36.774 | 155 | 87 | 3 | 1 | 148 | 1 | 151 | 5.23e-27 | 102 |
| MS.gene064722.t1 | AT5G62165 | 36.774 | 155 | 87 | 3 | 1 | 148 | 1 | 151 | 5.23e-27 | 102 |
| MS.gene064722.t1 | AT5G62165 | 36.774 | 155 | 87 | 3 | 1 | 148 | 1 | 151 | 5.23e-27 | 102 |
| MS.gene064722.t1 | AT3G58780 | 34.426 | 183 | 88 | 3 | 1 | 153 | 16 | 196 | 7.28e-27 | 104 |
| MS.gene064722.t1 | AT2G22540 | 41.463 | 164 | 77 | 4 | 1 | 153 | 1 | 156 | 1.05e-26 | 103 |
| MS.gene064722.t1 | AT2G22540 | 41.463 | 164 | 77 | 4 | 1 | 153 | 1 | 156 | 1.05e-26 | 103 |
| MS.gene064722.t1 | AT3G57390 | 33.854 | 192 | 109 | 5 | 1 | 177 | 1 | 189 | 1.27e-26 | 102 |
| MS.gene064722.t1 | AT5G62165 | 37.333 | 150 | 83 | 3 | 1 | 143 | 1 | 146 | 1.57e-26 | 100 |
| MS.gene064722.t1 | AT5G62165 | 37.333 | 150 | 83 | 3 | 1 | 143 | 1 | 146 | 1.57e-26 | 100 |
| MS.gene064722.t1 | AT5G62165 | 37.333 | 150 | 83 | 3 | 1 | 143 | 1 | 146 | 1.57e-26 | 100 |
| MS.gene064722.t1 | AT5G62165 | 37.333 | 150 | 83 | 3 | 1 | 143 | 1 | 146 | 1.57e-26 | 100 |
| MS.gene064722.t1 | AT5G62165 | 37.333 | 150 | 83 | 3 | 1 | 143 | 1 | 146 | 1.57e-26 | 100 |
| MS.gene064722.t1 | AT3G57390 | 33.854 | 192 | 109 | 5 | 1 | 177 | 1 | 189 | 2.27e-26 | 102 |
| MS.gene064722.t1 | AT5G51860 | 35.632 | 174 | 97 | 4 | 1 | 166 | 1 | 167 | 2.70e-26 | 101 |
| MS.gene064722.t1 | AT5G62165 | 36.250 | 160 | 91 | 3 | 1 | 153 | 1 | 156 | 3.71e-26 | 101 |
| MS.gene064722.t1 | AT5G62165 | 36.250 | 160 | 91 | 3 | 1 | 153 | 1 | 156 | 3.71e-26 | 101 |
| MS.gene064722.t1 | AT5G62165 | 36.250 | 160 | 91 | 3 | 1 | 153 | 1 | 156 | 3.71e-26 | 101 |
| MS.gene064722.t1 | AT5G51860 | 35.632 | 174 | 97 | 4 | 1 | 166 | 1 | 167 | 4.18e-26 | 100 |
| MS.gene064722.t1 | AT5G62165 | 38.514 | 148 | 80 | 3 | 1 | 141 | 1 | 144 | 1.58e-25 | 99.4 |
| MS.gene064722.t1 | AT5G62165 | 38.514 | 148 | 80 | 3 | 1 | 141 | 1 | 144 | 1.58e-25 | 99.4 |
| MS.gene064722.t1 | AT2G22540 | 41.509 | 159 | 79 | 4 | 1 | 153 | 1 | 151 | 2.59e-24 | 97.1 |
| MS.gene064722.t1 | AT5G10140 | 32.749 | 171 | 89 | 3 | 1 | 160 | 1 | 156 | 2.14e-22 | 90.5 |
| MS.gene064722.t1 | AT5G62165 | 65.000 | 60 | 21 | 0 | 1 | 60 | 1 | 60 | 3.71e-22 | 87.8 |
| MS.gene064722.t1 | AT5G65070 | 30.851 | 188 | 113 | 3 | 1 | 175 | 1 | 184 | 2.69e-21 | 88.2 |
| MS.gene064722.t1 | AT1G71692 | 52.632 | 76 | 35 | 1 | 1 | 76 | 1 | 75 | 8.52e-21 | 87.0 |
| MS.gene064722.t1 | AT5G10140 | 33.333 | 159 | 80 | 3 | 1 | 148 | 1 | 144 | 1.17e-20 | 85.5 |
| MS.gene064722.t1 | AT5G10140 | 33.333 | 159 | 80 | 3 | 1 | 148 | 1 | 144 | 1.43e-20 | 86.3 |
| MS.gene064722.t1 | AT5G65070 | 33.813 | 139 | 88 | 2 | 1 | 139 | 1 | 135 | 3.12e-20 | 84.0 |
| MS.gene064722.t1 | AT5G10140 | 33.333 | 159 | 80 | 3 | 1 | 148 | 1 | 144 | 3.46e-20 | 84.7 |
| MS.gene064722.t1 | AT5G65050 | 31.928 | 166 | 95 | 5 | 1 | 159 | 1 | 155 | 1.70e-19 | 82.8 |
| MS.gene064722.t1 | AT5G65050 | 31.928 | 166 | 95 | 5 | 1 | 159 | 1 | 155 | 2.04e-19 | 83.2 |
| MS.gene064722.t1 | AT5G65050 | 31.447 | 159 | 91 | 5 | 1 | 152 | 1 | 148 | 4.21e-19 | 82.0 |
| MS.gene064722.t1 | AT5G65080 | 32.168 | 143 | 93 | 2 | 1 | 143 | 8 | 146 | 1.01e-18 | 81.3 |
| MS.gene064722.t1 | AT5G65070 | 29.730 | 185 | 97 | 5 | 1 | 155 | 1 | 182 | 1.10e-18 | 81.6 |
| MS.gene064722.t1 | AT5G65050 | 33.125 | 160 | 90 | 5 | 1 | 159 | 1 | 144 | 1.45e-18 | 80.5 |
| MS.gene064722.t1 | AT5G65070 | 29.358 | 218 | 108 | 6 | 1 | 175 | 1 | 215 | 2.64e-18 | 80.9 |
| MS.gene064722.t1 | AT5G65070 | 31.507 | 219 | 103 | 9 | 1 | 175 | 1 | 216 | 3.43e-18 | 80.5 |
| MS.gene064722.t1 | AT5G65080 | 32.867 | 143 | 91 | 3 | 1 | 143 | 8 | 145 | 3.70e-18 | 80.1 |
| MS.gene064722.t1 | AT1G22130 | 66.667 | 54 | 18 | 0 | 1 | 54 | 1 | 54 | 3.71e-18 | 82.0 |
| MS.gene064722.t1 | AT1G77980 | 64.815 | 54 | 19 | 0 | 1 | 54 | 1 | 54 | 8.93e-18 | 80.9 |
| MS.gene064722.t1 | AT5G65060 | 29.870 | 154 | 82 | 4 | 1 | 143 | 1 | 139 | 1.61e-16 | 75.5 |
| MS.gene064722.t1 | AT5G65060 | 43.836 | 73 | 40 | 1 | 1 | 73 | 1 | 72 | 1.95e-16 | 74.7 |
| MS.gene064722.t1 | AT5G65060 | 29.870 | 154 | 82 | 4 | 1 | 143 | 1 | 139 | 2.58e-16 | 74.7 |
| MS.gene064722.t1 | AT1G18750 | 58.491 | 53 | 22 | 0 | 1 | 53 | 1 | 53 | 7.15e-16 | 75.9 |
| MS.gene064722.t1 | AT1G18750 | 58.491 | 53 | 22 | 0 | 1 | 53 | 1 | 53 | 7.80e-16 | 75.9 |
| MS.gene064722.t1 | AT1G18750 | 58.491 | 53 | 22 | 0 | 1 | 53 | 1 | 53 | 9.91e-16 | 75.9 |
| MS.gene064722.t1 | AT1G77080 | 32.026 | 153 | 100 | 2 | 1 | 153 | 1 | 149 | 2.27e-15 | 72.4 |
| MS.gene064722.t1 | AT2G03060 | 39.785 | 93 | 55 | 1 | 1 | 93 | 1 | 92 | 3.78e-15 | 73.9 |
| MS.gene064722.t1 | AT2G03060 | 39.785 | 93 | 55 | 1 | 1 | 93 | 1 | 92 | 3.78e-15 | 73.9 |
| MS.gene064722.t1 | AT2G03060 | 39.785 | 93 | 55 | 1 | 1 | 93 | 1 | 92 | 3.78e-15 | 73.9 |
| MS.gene064722.t1 | AT2G03060 | 39.785 | 93 | 55 | 1 | 1 | 93 | 1 | 92 | 3.97e-15 | 73.9 |
| MS.gene064722.t1 | AT1G77080 | 33.117 | 154 | 97 | 3 | 1 | 153 | 1 | 149 | 5.91e-15 | 70.9 |
| MS.gene064722.t1 | AT1G77080 | 32.026 | 153 | 100 | 2 | 1 | 153 | 1 | 149 | 6.43e-15 | 70.5 |
| MS.gene064722.t1 | AT1G31140 | 31.944 | 144 | 92 | 2 | 1 | 139 | 1 | 143 | 6.84e-15 | 71.2 |
| MS.gene064722.t1 | AT1G77080 | 31.250 | 160 | 90 | 2 | 1 | 154 | 1 | 146 | 7.43e-15 | 69.7 |
| MS.gene064722.t1 | AT1G77080 | 31.447 | 159 | 89 | 2 | 1 | 153 | 1 | 145 | 1.13e-14 | 70.1 |
| MS.gene064722.t1 | AT1G72350 | 30.612 | 147 | 85 | 2 | 2 | 131 | 43 | 189 | 1.34e-14 | 70.9 |
| MS.gene064722.t1 | AT1G01530 | 50.000 | 60 | 30 | 0 | 1 | 60 | 6 | 65 | 1.59e-14 | 70.9 |
| MS.gene064722.t1 | AT2G34440 | 43.836 | 73 | 39 | 1 | 1 | 71 | 1 | 73 | 2.15e-14 | 68.9 |
| MS.gene064722.t1 | AT1G31140 | 32.653 | 147 | 89 | 3 | 1 | 139 | 1 | 145 | 4.44e-14 | 68.9 |
| MS.gene064722.t1 | AT1G77950 | 53.704 | 54 | 25 | 0 | 1 | 54 | 1 | 54 | 4.74e-14 | 69.7 |
| MS.gene064722.t1 | AT1G77950 | 53.704 | 54 | 25 | 0 | 1 | 54 | 1 | 54 | 4.74e-14 | 69.7 |
| MS.gene064722.t1 | AT1G77950 | 53.704 | 54 | 25 | 0 | 1 | 54 | 1 | 54 | 4.74e-14 | 69.7 |
| MS.gene064722.t1 | AT1G77950 | 53.704 | 54 | 25 | 0 | 1 | 54 | 1 | 54 | 4.74e-14 | 69.7 |
| MS.gene064722.t1 | AT4G37435 | 52.632 | 57 | 27 | 0 | 1 | 57 | 1 | 57 | 1.35e-13 | 67.4 |
| MS.gene064722.t1 | AT3G66656 | 48.333 | 60 | 31 | 0 | 1 | 60 | 1 | 60 | 2.22e-13 | 66.6 |
| MS.gene064722.t1 | AT1G65360 | 45.161 | 62 | 34 | 0 | 1 | 62 | 6 | 67 | 5.17e-13 | 66.2 |
| MS.gene064722.t1 | AT1G69540 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 7.79e-13 | 67.0 |
| MS.gene064722.t1 | AT4G36590 | 50.820 | 61 | 30 | 0 | 2 | 62 | 7 | 67 | 8.29e-13 | 66.2 |
| MS.gene064722.t1 | AT5G60440 | 32.609 | 138 | 77 | 5 | 2 | 138 | 7 | 129 | 9.25e-13 | 66.6 |
| MS.gene064722.t1 | AT1G47760 | 33.333 | 126 | 72 | 3 | 1 | 121 | 1 | 119 | 9.48e-13 | 64.7 |
| MS.gene064722.t1 | AT1G69540 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 9.54e-13 | 67.0 |
| MS.gene064722.t1 | AT1G77080 | 46.575 | 73 | 38 | 1 | 1 | 73 | 1 | 72 | 1.03e-12 | 65.5 |
| MS.gene064722.t1 | AT2G24840 | 27.638 | 199 | 118 | 4 | 1 | 183 | 62 | 250 | 1.61e-12 | 65.5 |
| MS.gene064722.t1 | AT3G04100 | 41.667 | 60 | 35 | 0 | 2 | 61 | 14 | 73 | 3.43e-12 | 63.9 |
| MS.gene064722.t1 | AT1G29962 | 45.000 | 60 | 33 | 0 | 2 | 61 | 8 | 67 | 2.10e-11 | 61.2 |
| MS.gene064722.t1 | AT1G28460 | 45.000 | 60 | 33 | 0 | 2 | 61 | 8 | 67 | 3.34e-11 | 60.5 |
Find 50 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATTGGATTCTCAAATTT+AGG | 0.238867 | 3.4:+97546059 | MS.gene064722:CDS |
| TCAACTTTACCTTCTTCCTT+TGG | 0.281706 | 3.4:-97545767 | None:intergenic |
| CAACTTTACCTTCTTCCTTT+GGG | 0.311919 | 3.4:-97545766 | None:intergenic |
| TGTTCTCTATTCTCTTGATC+TGG | 0.318834 | 3.4:-97541607 | None:intergenic |
| CACTGTTCTTTGTGATGCTA+AGG | 0.392741 | 3.4:+97541694 | MS.gene064722:CDS |
| GCTCCTCCATTGTGAGGATT+AGG | 0.402175 | 3.4:-97546119 | None:intergenic |
| GAGGCTTCTTGAGGATGAAA+TGG | 0.410025 | 3.4:+97542229 | MS.gene064722:CDS |
| AGAAACTGAAAGATGTCAAT+AGG | 0.417053 | 3.4:+97542044 | MS.gene064722:CDS |
| GGAATCTTCGCAAGGAGATT+AGG | 0.438224 | 3.4:+97542065 | MS.gene064722:CDS |
| TTCATGAAGCTTGCCAGTGC+TGG | 0.445387 | 3.4:-97541735 | None:intergenic |
| GGGGAGTACGAGTCTGTGAT+TGG | 0.478663 | 3.4:+97546044 | MS.gene064722:CDS |
| CAACAGACTCCTGCGTGACT+TGG | 0.486936 | 3.4:+97545881 | MS.gene064722:CDS |
| ATTATCATGTTCTCCAGCAC+TGG | 0.494724 | 3.4:+97541722 | MS.gene064722:CDS |
| GTAGTTTAATAATGAGAGAG+AGG | 0.503057 | 3.4:+97545854 | MS.gene064722:intron |
| TACGTACTAGGCAGAGGATG+GGG | 0.507362 | 3.4:+97542174 | MS.gene064722:intron |
| TGGAGGAGCATCAGCTGCCT+CGG | 0.511038 | 3.4:+97546133 | MS.gene064722:CDS |
| TTGAAATGATGGACAATGGA+GGG | 0.529931 | 3.4:+97546024 | MS.gene064722:CDS |
| TCTGTGGAACTCTCATTATG+AGG | 0.531523 | 3.4:+97541919 | MS.gene064722:CDS |
| ACAAAGAACAGTGAGCTCAT+TGG | 0.534621 | 3.4:-97541684 | None:intergenic |
| GAAAGAAACATACGAGGCGG+AGG | 0.547284 | 3.4:-97541768 | None:intergenic |
| GATTGACACCCAAAGGAAGA+AGG | 0.549485 | 3.4:+97545758 | MS.gene064722:CDS |
| CTTGCGCTCACGAATAGCCT+TGG | 0.554248 | 3.4:-97542261 | None:intergenic |
| TGAAATGATGGACAATGGAG+GGG | 0.558395 | 3.4:+97546025 | MS.gene064722:CDS |
| GATCAATATCAGATGACTGT+AGG | 0.558840 | 3.4:+97541890 | MS.gene064722:CDS |
| TGAAATGGACAAGGCTGCCA+AGG | 0.561225 | 3.4:+97542244 | MS.gene064722:CDS |
| ACTACGTACTAGGCAGAGGA+TGG | 0.565678 | 3.4:+97542172 | MS.gene064722:intron |
| CTACGTACTAGGCAGAGGAT+GGG | 0.571534 | 3.4:+97542173 | MS.gene064722:intron |
| TTGTGAGGATTAGGATGAGT+AGG | 0.571730 | 3.4:-97546110 | None:intergenic |
| CAAGGCTATTCGTGAGCGCA+AGG | 0.573130 | 3.4:+97542262 | MS.gene064722:CDS |
| ACTTACTCAAAACGAAGGAA+TGG | 0.578899 | 3.4:+97541647 | MS.gene064722:CDS |
| GGAAGAGCTGAGGCTTCTTG+AGG | 0.588608 | 3.4:+97542220 | MS.gene064722:CDS |
| CAAATCAGATTGACACCCAA+AGG | 0.596522 | 3.4:+97545751 | MS.gene064722:CDS |
| TTGTCCATCATTTCAAAACG+TGG | 0.601318 | 3.4:-97546017 | None:intergenic |
| GCTGATGCTCCTCCATTGTG+AGG | 0.602305 | 3.4:-97546125 | None:intergenic |
| AAAGAAACATACGAGGCGGA+GGG | 0.606316 | 3.4:-97541767 | None:intergenic |
| ATCTGAGCATGGAAGAGCTG+AGG | 0.615257 | 3.4:+97542210 | MS.gene064722:CDS |
| TGTCAATAGGAATCTTCGCA+AGG | 0.629338 | 3.4:+97542057 | MS.gene064722:CDS |
| ACGTACTAGGCAGAGGATGG+GGG | 0.634592 | 3.4:+97542175 | MS.gene064722:intron |
| CATCCTAATCCTCACAATGG+AGG | 0.635153 | 3.4:+97546116 | MS.gene064722:CDS |
| AAGCTCAATGCAAACATGCG+TGG | 0.640903 | 3.4:-97546083 | None:intergenic |
| TCTTGAGGATGAAATGGACA+AGG | 0.641493 | 3.4:+97542235 | MS.gene064722:CDS |
| ATGTCTGAATGATCTGAGCA+TGG | 0.649883 | 3.4:+97542199 | MS.gene064722:CDS |
| GGTTATCTAGCTATGGCTCG+AGG | 0.656910 | 3.4:+97541578 | None:intergenic |
| AGGGTAAGTGGTGAGATCCG+AGG | 0.669094 | 3.4:-97546150 | None:intergenic |
| TTTGAAATGATGGACAATGG+AGG | 0.672358 | 3.4:+97546023 | MS.gene064722:CDS |
| AAGTAACTTACTCAAAACGA+AGG | 0.681799 | 3.4:+97541642 | MS.gene064722:CDS |
| ACTCATCCTAATCCTCACAA+TGG | 0.687965 | 3.4:+97546113 | MS.gene064722:CDS |
| AAGAAACATACGAGGCGGAG+GGG | 0.689447 | 3.4:-97541766 | None:intergenic |
| TGACTGTAGGAATTGATCTG+TGG | 0.697006 | 3.4:+97541903 | MS.gene064722:CDS |
| TGATACATACCAAGTCACGC+AGG | 0.717237 | 3.4:-97545890 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAAAAAAAAAAAT+AGG | + | chr3.4:97543248-97543267 | MS.gene064722:intron | 0.0% |
| !! | AAAAAAAATATTATCATCAT+TGG | - | chr3.4:97544863-97544882 | None:intergenic | 10.0% |
| !! | ATAAGTATTATAAATTTCTT+TGG | + | chr3.4:97542091-97542110 | MS.gene064722:intron | 10.0% |
| !! | ATATTTATATATAGGATTTA+GGG | - | chr3.4:97542137-97542156 | None:intergenic | 10.0% |
| !! | TGAAAAAAAATAAAAGAAAA+AGG | - | chr3.4:97541965-97541984 | None:intergenic | 10.0% |
| !! | TTAAAATTTATGTTCAAAAT+CGG | + | chr3.4:97544121-97544140 | MS.gene064722:intron | 10.0% |
| !!! | AAAATTGATTGATTTAATTA+TGG | + | chr3.4:97545973-97545992 | MS.gene064722:intron | 10.0% |
| !!! | ACTATTTTCATAAAATATAT+TGG | + | chr3.4:97542934-97542953 | MS.gene064722:intron | 10.0% |
| !!! | CATAAATTTTAATATAGTAT+TGG | - | chr3.4:97544113-97544132 | None:intergenic | 10.0% |
| !!! | CTATCAAAATATAATTTTAT+CGG | - | chr3.4:97544679-97544698 | None:intergenic | 10.0% |
| !!! | TATAATTATATGATAATGTA+AGG | - | chr3.4:97543875-97543894 | None:intergenic | 10.0% |
| !! | AAAATAAAAGAAAAAGGAAA+AGG | - | chr3.4:97541959-97541978 | None:intergenic | 15.0% |
| !! | AAATAAAAGAAAAAGGAAAA+GGG | - | chr3.4:97541958-97541977 | None:intergenic | 15.0% |
| !! | ACATATGCATATTTATATAT+AGG | - | chr3.4:97542145-97542164 | None:intergenic | 15.0% |
| !! | ATATACTACGATAAAAATAA+AGG | - | chr3.4:97543729-97543748 | None:intergenic | 15.0% |
| !! | ATTCTATATAAGTAAAAAAC+TGG | - | chr3.4:97545549-97545568 | None:intergenic | 15.0% |
| !! | CATATTTATATATAGGATTT+AGG | - | chr3.4:97542138-97542157 | None:intergenic | 15.0% |
| !! | TAAACAAAAATTCTTCAAAA+AGG | - | chr3.4:97542614-97542633 | None:intergenic | 15.0% |
| !! | TATATATCCAATAATTATCT+AGG | + | chr3.4:97544752-97544771 | MS.gene064722:intron | 15.0% |
| !! | TTGGATATATATATAATGTT+AGG | - | chr3.4:97544743-97544762 | None:intergenic | 15.0% |
| !!! | ATCAATTTTTGTCATATTTA+AGG | + | chr3.4:97543585-97543604 | MS.gene064722:intron | 15.0% |
| !!! | ATGATAATATTTTTTTTCTG+AGG | + | chr3.4:97544866-97544885 | MS.gene064722:intron | 15.0% |
| !!! | TCAATTTTTGTCATATTTAA+GGG | + | chr3.4:97543586-97543605 | MS.gene064722:intron | 15.0% |
| !!! | TCATTTTATCTATAAATTAC+AGG | + | chr3.4:97545367-97545386 | MS.gene064722:intron | 15.0% |
| !!! | TTAAAATTAGTCATCTTTTT+AGG | - | chr3.4:97544472-97544491 | None:intergenic | 15.0% |
| !! | AAAAAAGAACCAAAGTTATT+AGG | - | chr3.4:97545341-97545360 | None:intergenic | 20.0% |
| !! | AATTATTCATATCATGACAA+AGG | - | chr3.4:97542852-97542871 | None:intergenic | 20.0% |
| !! | AATTGTATAACAAACTAACA+AGG | - | chr3.4:97545656-97545675 | None:intergenic | 20.0% |
| !! | ACTTAGATAGAATTACATAT+AGG | + | chr3.4:97545925-97545944 | MS.gene064722:intron | 20.0% |
| !! | ATATAATTGAAGTATGTCAT+AGG | - | chr3.4:97543476-97543495 | None:intergenic | 20.0% |
| !! | ATTGCATTTACTTGTAAAAT+CGG | + | chr3.4:97544144-97544163 | MS.gene064722:intron | 20.0% |
| !! | CATAAAAAAATAGTGAAGTA+GGG | + | chr3.4:97543791-97543810 | MS.gene064722:intron | 20.0% |
| !! | GAAACGATTTAAAAACTAAA+AGG | + | chr3.4:97544576-97544595 | MS.gene064722:intron | 20.0% |
| !! | TAAATAAAACAGATTACGAA+AGG | - | chr3.4:97542519-97542538 | None:intergenic | 20.0% |
| !! | TCATAAAAAAATAGTGAAGT+AGG | + | chr3.4:97543790-97543809 | MS.gene064722:intron | 20.0% |
| !! | TCATAAAATATATTGGAGAA+GGG | + | chr3.4:97542941-97542960 | MS.gene064722:intron | 20.0% |
| !! | TCTGATTTATATTATTGTCT+TGG | + | chr3.4:97541841-97541860 | MS.gene064722:intron | 20.0% |
| !! | TTATGCTAACTGAAAATTAA+TGG | - | chr3.4:97545449-97545468 | None:intergenic | 20.0% |
| !! | TTCATAAAATATATTGGAGA+AGG | + | chr3.4:97542940-97542959 | MS.gene064722:intron | 20.0% |
| !! | TTCATCACACATATAAATTA+AGG | + | chr3.4:97542368-97542387 | MS.gene064722:intron | 20.0% |
| !! | TTTACACATGAGAAAATAAA+TGG | + | chr3.4:97542997-97543016 | MS.gene064722:intron | 20.0% |
| !!! | AAAAGATGACTAATTTTAAG+TGG | + | chr3.4:97544473-97544492 | MS.gene064722:intron | 20.0% |
| !!! | AAATTTTAAAATGACTTAGG+TGG | - | chr3.4:97543429-97543448 | None:intergenic | 20.0% |
| !!! | ACCAAATTTTAAAATGACTT+AGG | - | chr3.4:97543432-97543451 | None:intergenic | 20.0% |
| !!! | ACCTAAGTCATTTTAAAATT+TGG | + | chr3.4:97543428-97543447 | MS.gene064722:intron | 20.0% |
| !!! | ATTTAGTACTTTTGTTGTAA+TGG | - | chr3.4:97542733-97542752 | None:intergenic | 20.0% |
| !!! | CAATGTTTTAAATTGAGAAA+GGG | + | chr3.4:97545247-97545266 | MS.gene064722:intron | 20.0% |
| !!! | CAATTTTTGTCATATTTAAG+GGG | + | chr3.4:97543587-97543606 | MS.gene064722:intron | 20.0% |
| !!! | CACCAAATAATTTTTTTGAA+CGG | - | chr3.4:97544778-97544797 | None:intergenic | 20.0% |
| !!! | CTAAATTTTGATATCATGAA+TGG | + | chr3.4:97543685-97543704 | MS.gene064722:intron | 20.0% |
| !!! | TTAACTTATTTCTTGTTCAT+AGG | + | chr3.4:97545790-97545809 | MS.gene064722:intron | 20.0% |
| !!! | TTATATGTGTGATGAAATTT+TGG | - | chr3.4:97542364-97542383 | None:intergenic | 20.0% |
| !!! | TTCGTAATCTGTTTTATTTA+CGG | + | chr3.4:97542519-97542538 | MS.gene064722:intron | 20.0% |
| !!! | TTGATTGATTTAATTATGGA+AGG | + | chr3.4:97545977-97545996 | MS.gene064722:intron | 20.0% |
| !!! | TTTAGTACTTTTGTTGTAAT+GGG | - | chr3.4:97542732-97542751 | None:intergenic | 20.0% |
| ! | AATTTCTATTAACTCTGTAC+TGG | + | chr3.4:97545315-97545334 | MS.gene064722:intron | 25.0% |
| ! | ATAATTCCAAATTAGCTACA+AGG | - | chr3.4:97542566-97542585 | None:intergenic | 25.0% |
| ! | ATGTACATGTCATTACATAT+GGG | + | chr3.4:97543168-97543187 | MS.gene064722:intron | 25.0% |
| ! | ATGTTTAAATTACACATGAG+AGG | + | chr3.4:97543100-97543119 | MS.gene064722:intron | 25.0% |
| ! | ATTAGATCAAATGCATCTAA+AGG | + | chr3.4:97544262-97544281 | MS.gene064722:intron | 25.0% |
| ! | ATTTACTTGTAAAATCGGTT+TGG | + | chr3.4:97544149-97544168 | MS.gene064722:intron | 25.0% |
| ! | GAAACGATTCAAAAACTAAA+AGG | - | chr3.4:97544378-97544397 | None:intergenic | 25.0% |
| ! | TATAAGTAAAAAACTGGAGA+AGG | - | chr3.4:97545543-97545562 | None:intergenic | 25.0% |
| ! | TATCATAGCCAAAATCTATT+GGG | - | chr3.4:97544015-97544034 | None:intergenic | 25.0% |
| ! | TATGTACATGTCATTACATA+TGG | + | chr3.4:97543167-97543186 | MS.gene064722:intron | 25.0% |
| ! | TGGTGCAGAATAAAAATATT+TGG | + | chr3.4:97544169-97544188 | MS.gene064722:intron | 25.0% |
| ! | TTATATATAGGATTTAGGGA+AGG | - | chr3.4:97542133-97542152 | None:intergenic | 25.0% |
| ! | TTTGTGTAGAATTTACACTT+GGG | - | chr3.4:97545626-97545645 | None:intergenic | 25.0% |
| !! | AAAAACTAAAAGGACTTGTT+TGG | - | chr3.4:97544605-97544586 | None:intergenic | 25.0% |
| !! | AAAACTAAAAGGACTTGTTT+GGG | - | chr3.4:97544606-97544587 | None:intergenic | 25.0% |
| !! | GAAATTCAATAGTTTGCAAT+TGG | - | chr3.4:97545301-97545320 | None:intergenic | 25.0% |
| !!! | ACTAATTTTAAGTGGATGTT+AGG | + | chr3.4:97544481-97544500 | MS.gene064722:intron | 25.0% |
| !!! | ATCTTTTTAGGTATGACAAA+TGG | - | chr3.4:97544460-97544479 | None:intergenic | 25.0% |
| !!! | CATTTTAGAAACTCATTAAG+AGG | + | chr3.4:97543282-97543301 | MS.gene064722:intron | 25.0% |
| !!! | GAGAAAACAATTTGATTTTG+TGG | - | chr3.4:97545427-97545446 | None:intergenic | 25.0% |
| !!! | GCAATGTTTTAAATTGAGAA+AGG | + | chr3.4:97545246-97545265 | MS.gene064722:intron | 25.0% |
| !!! | TTGAGACTTTTGAAACTTAA+AGG | + | chr3.4:97544605-97544624 | MS.gene064722:intron | 25.0% |
| !!! | TTGAGACTTTTGAAACTTAA+AGG | - | chr3.4:97544624-97544605 | None:intergenic | 25.0% |
| !!! | TTTCAAACAAGTCATTTTAG+AGG | + | chr3.4:97544394-97544413 | MS.gene064722:intron | 25.0% |
| AAACTAAGATAAGCTCATGT+TGG | - | chr3.4:97543213-97543232 | None:intergenic | 30.0% | |
| AAGTAACTTACTCAAAACGA+AGG | + | chr3.4:97541642-97541661 | MS.gene064722:CDS | 30.0% | |
| AAGTTCTCTTGCATATTCTA+TGG | - | chr3.4:97542022-97542041 | None:intergenic | 30.0% | |
| ACACATAAGTAGACAAGTTA+GGG | + | chr3.4:97543382-97543401 | MS.gene064722:intron | 30.0% | |
| AGAAAAAGGAAAAGGGAAAA+TGG | - | chr3.4:97541951-97541970 | None:intergenic | 30.0% | |
| AGAAACTGAAAGATGTCAAT+AGG | + | chr3.4:97542044-97542063 | MS.gene064722:CDS | 30.0% | |
| ATAAAAGCTGCATTGTAAAG+TGG | - | chr3.4:97543770-97543789 | None:intergenic | 30.0% | |
| ATAAATAGAGAAGCTAGCTA+GGG | - | chr3.4:97541799-97541818 | None:intergenic | 30.0% | |
| ATGAAATCACAACTTACAAC+AGG | - | chr3.4:97545193-97545212 | None:intergenic | 30.0% | |
| ATGTGTAAATTACACATGAG+AGG | - | chr3.4:97542986-97543005 | None:intergenic | 30.0% | |
| CATATTGTAGATAGCATAGT+TGG | - | chr3.4:97544548-97544567 | None:intergenic | 30.0% | |
| CTAAAAAAGTAAAGGGTAAG+TGG | - | chr3.4:97546165-97546184 | None:intergenic | 30.0% | |
| GAAACTTAAAGGATCACTTT+GGG | - | chr3.4:97544309-97544328 | None:intergenic | 30.0% | |
| GGCCGTTCAAAAAAATTATT+TGG | + | chr3.4:97544773-97544792 | MS.gene064722:intron | 30.0% | |
| GGGAAAAACGAAAAACTTAA+AGG | - | chr3.4:97544655-97544636 | None:intergenic | 30.0% | |
| GTAGTTTAATAATGAGAGAG+AGG | + | chr3.4:97545854-97545873 | MS.gene064722:intron | 30.0% | |
| GTATCATAGCCAAAATCTAT+TGG | - | chr3.4:97544016-97544035 | None:intergenic | 30.0% | |
| GTGATTGGATTCTCAAATTT+AGG | + | chr3.4:97546059-97546078 | MS.gene064722:CDS | 30.0% | |
| GTTTGTGTAGAATTTACACT+TGG | - | chr3.4:97545627-97545646 | None:intergenic | 30.0% | |
| TAAAATGCATTAATGAGTCC+TGG | + | chr3.4:97542689-97542708 | MS.gene064722:intron | 30.0% | |
| TAACGAGTTTCTTATGACAA+TGG | + | chr3.4:97545708-97545727 | MS.gene064722:intron | 30.0% | |
| TACACATAAGTAGACAAGTT+AGG | + | chr3.4:97543381-97543400 | MS.gene064722:intron | 30.0% | |
| TCAACTAAATTCTATGTCTC+TGG | - | chr3.4:97542422-97542441 | None:intergenic | 30.0% | |
| TGAAACTTAAAGGATCACTT+TGG | - | chr3.4:97544310-97544329 | None:intergenic | 30.0% | |
| TTCAACTCAATAATCGAACT+CGG | - | chr3.4:97542809-97542828 | None:intergenic | 30.0% | |
| ! | AACATTTGAAGTGTGACTAT+TGG | + | chr3.4:97543960-97543979 | MS.gene064722:intron | 30.0% |
| ! | GTTTAGAGTATAATATCACC+AGG | - | chr3.4:97542710-97542729 | None:intergenic | 30.0% |
| ! | TATTTTCATCAGCTCACAAA+TGG | - | chr3.4:97543133-97543152 | None:intergenic | 30.0% |
| !! | AGTGAAGTAGGGTTTTATAA+AGG | + | chr3.4:97543802-97543821 | MS.gene064722:intron | 30.0% |
| !! | CTTACAAAGTTGACTTGTAA+AGG | + | chr3.4:97544062-97544081 | MS.gene064722:intron | 30.0% |
| !! | TGACAATGGATTACAGTATA+AGG | + | chr3.4:97545722-97545741 | MS.gene064722:intron | 30.0% |
| !! | TTTTCTGAGGATTACTCAAT+TGG | + | chr3.4:97544879-97544898 | MS.gene064722:intron | 30.0% |
| !!! | AACTAACTTCGATGCTTTTT+TGG | + | chr3.4:97545036-97545055 | MS.gene064722:intron | 30.0% |
| !!! | CATATGCTATTTTTTAAGCC+CGG | - | chr3.4:97543829-97543848 | None:intergenic | 30.0% |
| !!! | TTGGGACTTTTGAAACTTAA+AGG | - | chr3.4:97544349-97544368 | None:intergenic | 30.0% |
| !!! | TTTTTAGGTATGACAAATGG+TGG | - | chr3.4:97544457-97544476 | None:intergenic | 30.0% |
| AATGTTCAATCTTAGACGTG+AGG | - | chr3.4:97543946-97543965 | None:intergenic | 35.0% | |
| ACTAGCAAGCAATTTAGCAT+CGG | - | chr3.4:97545480-97545499 | None:intergenic | 35.0% | |
| ACTTACTCAAAACGAAGGAA+TGG | + | chr3.4:97541647-97541666 | MS.gene064722:CDS | 35.0% | |
| AGATATTGTGAGTGGTTGAT+GGG | + | chr3.4:97544954-97544973 | MS.gene064722:intron | 35.0% | |
| AGGTGTTCAGTTCAAATTGT+TGG | + | chr3.4:97545387-97545406 | MS.gene064722:intron | 35.0% | |
| ATCACAACTTACAACAGGAT+TGG | - | chr3.4:97545188-97545207 | None:intergenic | 35.0% | |
| ATGTTCAATCTTAGACGTGA+GGG | - | chr3.4:97543945-97543964 | None:intergenic | 35.0% | |
| ATTCTGCCTTGTAGCTAATT+TGG | + | chr3.4:97542557-97542576 | MS.gene064722:intron | 35.0% | |
| ATTGCATGATGCCTTGAATT+TGG | - | chr3.4:97545004-97545023 | None:intergenic | 35.0% | |
| CAACTTTACCTTCTTCCTTT+GGG | - | chr3.4:97545769-97545788 | None:intergenic | 35.0% | |
| CCATGATAGTAACATGAGAT+GGG | + | chr3.4:97545127-97545146 | MS.gene064722:intron | 35.0% | |
| GAAACTTAAAGGACCACTTT+GGG | + | chr3.4:97544616-97544635 | MS.gene064722:intron | 35.0% | |
| GACAAGTAATGTGTTAGACT+CGG | + | chr3.4:97543848-97543867 | MS.gene064722:intron | 35.0% | |
| GATAAATAGAGAAGCTAGCT+AGG | - | chr3.4:97541800-97541819 | None:intergenic | 35.0% | |
| GATCAATATCAGATGACTGT+AGG | + | chr3.4:97541890-97541909 | MS.gene064722:CDS | 35.0% | |
| GGTCAATTGAATTAGACTTG+TGG | + | chr3.4:97543449-97543468 | MS.gene064722:intron | 35.0% | |
| GTTAGAGAAAGAAACATACG+AGG | - | chr3.4:97541777-97541796 | None:intergenic | 35.0% | |
| TAACAAACTAACAAGGTGAG+AGG | - | chr3.4:97545649-97545668 | None:intergenic | 35.0% | |
| TAAGATAAGCTCATGTTGGT+TGG | - | chr3.4:97543209-97543228 | None:intergenic | 35.0% | |
| TACACTTGGGACAAATTGAT+TGG | - | chr3.4:97545613-97545632 | None:intergenic | 35.0% | |
| TACCGAGTCACAATTTCAAT+AGG | + | chr3.4:97544921-97544940 | MS.gene064722:intron | 35.0% | |
| TATCGGTCAAATGCATCTAA+AGG | - | chr3.4:97544662-97544681 | None:intergenic | 35.0% | |
| TCAACTTTACCTTCTTCCTT+TGG | - | chr3.4:97545770-97545789 | None:intergenic | 35.0% | |
| TCATAAGAAACTCGTTAGCA+TGG | - | chr3.4:97545705-97545724 | None:intergenic | 35.0% | |
| TCATGTTACTATCATGGACA+TGG | - | chr3.4:97545124-97545143 | None:intergenic | 35.0% | |
| TCCATGATAGTAACATGAGA+TGG | + | chr3.4:97545126-97545145 | MS.gene064722:intron | 35.0% | |
| TGAAACTTAAAGGACCACTT+TGG | + | chr3.4:97544615-97544634 | MS.gene064722:intron | 35.0% | |
| TGAACGGCCTAGATAATTAT+TGG | - | chr3.4:97544762-97544781 | None:intergenic | 35.0% | |
| TGCCTATTGAAATTGTGACT+CGG | - | chr3.4:97544926-97544945 | None:intergenic | 35.0% | |
| TGTTCTCTATTCTCTTGATC+TGG | - | chr3.4:97541610-97541629 | None:intergenic | 35.0% | |
| TTGTCCATCATTTCAAAACG+TGG | - | chr3.4:97546020-97546039 | None:intergenic | 35.0% | |
| ! | AATTCAAGGCATCATGCAAT+TGG | + | chr3.4:97545004-97545023 | MS.gene064722:intron | 35.0% |
| ! | GTGAAAAGTATGCCAACATT+CGG | + | chr3.4:97544795-97544814 | MS.gene064722:intron | 35.0% |
| ! | TTCTTTCACACTTTTGTGTG+TGG | - | chr3.4:97544230-97544249 | None:intergenic | 35.0% |
| ! | TTTGCAATTGGTTCTTGTAG+TGG | - | chr3.4:97545289-97545308 | None:intergenic | 35.0% |
| ! | TTTTGTCCAGATATTGTGAG+TGG | + | chr3.4:97544946-97544965 | MS.gene064722:intron | 35.0% |
| !! | AAAAGCATCGAAGTTAGTTG+TGG | - | chr3.4:97545035-97545054 | None:intergenic | 35.0% |
| !! | AAGGAATGGTCTTTTCAAGA+AGG | + | chr3.4:97541661-97541680 | MS.gene064722:CDS | 35.0% |
| !! | AGTAGGGTTTTATAAAGGTC+CGG | + | chr3.4:97543807-97543826 | MS.gene064722:intron | 35.0% |
| !! | GTCGTACAAAATGGACTTTT+AGG | + | chr3.4:97542474-97542493 | MS.gene064722:intron | 35.0% |
| !! | GTTTTTCGTTTTTCCCAAAG+TGG | - | chr3.4:97544312-97544293 | None:intergenic | 35.0% |
| !! | TTGAAATGATGGACAATGGA+GGG | + | chr3.4:97546024-97546043 | MS.gene064722:CDS | 35.0% |
| !! | TTTGAAATGATGGACAATGG+AGG | + | chr3.4:97546023-97546042 | MS.gene064722:CDS | 35.0% |
| !!! | AGATCCACGTTTTGAAATGA+TGG | + | chr3.4:97546013-97546032 | MS.gene064722:CDS | 35.0% |
| !!! | CGTTTTGAAATGATGGACAA+TGG | + | chr3.4:97546020-97546039 | MS.gene064722:CDS | 35.0% |
| ACAAAGAACAGTGAGCTCAT+TGG | - | chr3.4:97541687-97541706 | None:intergenic | 40.0% | |
| ACAACTTACAACAGGATTGG+CGG | - | chr3.4:97545185-97545204 | None:intergenic | 40.0% | |
| ACTCATCCTAATCCTCACAA+TGG | + | chr3.4:97546113-97546132 | MS.gene064722:CDS | 40.0% | |
| AGAGAAAGAAACATACGAGG+CGG | - | chr3.4:97541774-97541793 | None:intergenic | 40.0% | |
| AGTGTGACTATTGGCATGAT+AGG | + | chr3.4:97543969-97543988 | MS.gene064722:intron | 40.0% | |
| ATAGTAACATGAGATGGGCA+TGG | + | chr3.4:97545132-97545151 | MS.gene064722:intron | 40.0% | |
| ATGTCTGAATGATCTGAGCA+TGG | + | chr3.4:97542199-97542218 | MS.gene064722:CDS | 40.0% | |
| ATTATCATGTTCTCCAGCAC+TGG | + | chr3.4:97541722-97541741 | MS.gene064722:CDS | 40.0% | |
| CAAATCAGATTGACACCCAA+AGG | + | chr3.4:97545751-97545770 | MS.gene064722:CDS | 40.0% | |
| CACCTTGATTGCCAAATTCA+AGG | + | chr3.4:97544990-97545009 | MS.gene064722:intron | 40.0% | |
| CACTGTTCTTTGTGATGCTA+AGG | + | chr3.4:97541694-97541713 | MS.gene064722:CDS | 40.0% | |
| CAGATATTGTGAGTGGTTGA+TGG | + | chr3.4:97544953-97544972 | MS.gene064722:intron | 40.0% | |
| CATCAACCACTCACAATATC+TGG | - | chr3.4:97544955-97544974 | None:intergenic | 40.0% | |
| CCAACATTCGGCTCAAAATT+GGG | + | chr3.4:97544807-97544826 | MS.gene064722:intron | 40.0% | |
| CCCATCTCATGTTACTATCA+TGG | - | chr3.4:97545130-97545149 | None:intergenic | 40.0% | |
| GTGTGACTATTGGCATGATA+GGG | + | chr3.4:97543970-97543989 | MS.gene064722:intron | 40.0% | |
| TCGGTACGTTGAACAAAAGA+AGG | - | chr3.4:97544907-97544926 | None:intergenic | 40.0% | |
| TCTGTGGAACTCTCATTATG+AGG | + | chr3.4:97541919-97541938 | MS.gene064722:CDS | 40.0% | |
| TCTTGAGGATGAAATGGACA+AGG | + | chr3.4:97542235-97542254 | MS.gene064722:CDS | 40.0% | |
| TGACTGTAGGAATTGATCTG+TGG | + | chr3.4:97541903-97541922 | MS.gene064722:CDS | 40.0% | |
| TGCCTTGAATTTGGCAATCA+AGG | - | chr3.4:97544995-97545014 | None:intergenic | 40.0% | |
| TGCTTCCTTGAACTCATCTT+TGG | - | chr3.4:97544521-97544540 | None:intergenic | 40.0% | |
| TGGATGTTAGGAGCAAGATT+TGG | + | chr3.4:97544493-97544512 | MS.gene064722:intron | 40.0% | |
| TGGCAAATGAATGCAACAGA+GGG | - | chr3.4:97544843-97544862 | None:intergenic | 40.0% | |
| TGGTACCAAAGATGAGTTCA+AGG | + | chr3.4:97544513-97544532 | MS.gene064722:intron | 40.0% | |
| TGTCAATAGGAATCTTCGCA+AGG | + | chr3.4:97542057-97542076 | MS.gene064722:CDS | 40.0% | |
| TGTGACTATTGGCATGATAG+GGG | + | chr3.4:97543971-97543990 | MS.gene064722:intron | 40.0% | |
| TGTGTGTTGTACTACGTACT+AGG | + | chr3.4:97542162-97542181 | MS.gene064722:intron | 40.0% | |
| TTGGCAAATGAATGCAACAG+AGG | - | chr3.4:97544844-97544863 | None:intergenic | 40.0% | |
| TTGTGAGGATTAGGATGAGT+AGG | - | chr3.4:97546113-97546132 | None:intergenic | 40.0% | |
| ! | CTGTACTGGCCTAATAACTT+TGG | + | chr3.4:97545329-97545348 | MS.gene064722:intron | 40.0% |
| ! | GATATTGTGAGTGGTTGATG+GGG | + | chr3.4:97544955-97544974 | MS.gene064722:intron | 40.0% |
| ! | GCAAGTGACCCAATAGATTT+TGG | + | chr3.4:97544004-97544023 | MS.gene064722:intron | 40.0% |
| !! | AGTTGACTTGTAAAGGTCGA+TGG | + | chr3.4:97544069-97544088 | MS.gene064722:intron | 40.0% |
| !! | GTAGGGTTTTATAAAGGTCC+GGG | + | chr3.4:97543808-97543827 | MS.gene064722:intron | 40.0% |
| !! | TGAAATGATGGACAATGGAG+GGG | + | chr3.4:97546025-97546044 | MS.gene064722:CDS | 40.0% |
| !!! | AGTACCAATTTTTCGAGCAG+CGG | + | chr3.4:97545497-97545516 | MS.gene064722:intron | 40.0% |
| AAAGAAACATACGAGGCGGA+GGG | - | chr3.4:97541770-97541789 | None:intergenic | 45.0% | |
| AAGCTCAATGCAAACATGCG+TGG | - | chr3.4:97546086-97546105 | None:intergenic | 45.0% | |
| ACTTAGGTGGACGTTGTGAT+TGG | - | chr3.4:97543416-97543435 | None:intergenic | 45.0% | |
| ATTGGAGAAGGGAATCGAGA+GGG | + | chr3.4:97542952-97542971 | MS.gene064722:intron | 45.0% | |
| CATCCTAATCCTCACAATGG+AGG | + | chr3.4:97546116-97546135 | MS.gene064722:CDS | 45.0% | |
| CTTAGGTGGACGTTGTGATT+GGG | - | chr3.4:97543415-97543434 | None:intergenic | 45.0% | |
| GAGGCTTCTTGAGGATGAAA+TGG | + | chr3.4:97542229-97542248 | MS.gene064722:CDS | 45.0% | |
| GATTGACACCCAAAGGAAGA+AGG | + | chr3.4:97545758-97545777 | MS.gene064722:CDS | 45.0% | |
| GCCAACATTCGGCTCAAAAT+TGG | + | chr3.4:97544806-97544825 | MS.gene064722:intron | 45.0% | |
| GGAATCTTCGCAAGGAGATT+AGG | + | chr3.4:97542065-97542084 | MS.gene064722:CDS | 45.0% | |
| GGAGAAGGAGACACATATAG+AGG | - | chr3.4:97545528-97545547 | None:intergenic | 45.0% | |
| TATTGGAGAAGGGAATCGAG+AGG | + | chr3.4:97542951-97542970 | MS.gene064722:intron | 45.0% | |
| TGAATGCAACAGAGGGAACT+TGG | - | chr3.4:97544836-97544855 | None:intergenic | 45.0% | |
| TGATACATACCAAGTCACGC+AGG | - | chr3.4:97545893-97545912 | None:intergenic | 45.0% | |
| TTGTACTACGTACTAGGCAG+AGG | + | chr3.4:97542168-97542187 | MS.gene064722:intron | 45.0% | |
| TTTGCCGCTGCTCGAAAAAT+TGG | - | chr3.4:97545504-97545523 | None:intergenic | 45.0% | |
| ! | AATCTTAGACGTGAGGGTGT+GGG | - | chr3.4:97543939-97543958 | None:intergenic | 45.0% |
| ! | CAACTTACAACAGGATTGGC+GGG | - | chr3.4:97545184-97545203 | None:intergenic | 45.0% |
| ! | CCCAATTTTGAGCCGAATGT+TGG | - | chr3.4:97544810-97544829 | None:intergenic | 45.0% |
| !! | ATGGGGAGTACCAAAATTGG+GGG | + | chr3.4:97545156-97545175 | MS.gene064722:intron | 45.0% |
| !! | CATGGGGAGTACCAAAATTG+GGG | + | chr3.4:97545155-97545174 | MS.gene064722:intron | 45.0% |
| !! | GCATGGGGAGTACCAAAATT+GGG | + | chr3.4:97545154-97545173 | MS.gene064722:intron | 45.0% |
| !! | ATATTAAAAGTTATATTTAT+TGG | + | chr3.4:97541984-97542003 | MS.gene064722:intron | 5.0% |
| AACATGAGATGGGCATGGCA+TGG | + | chr3.4:97545137-97545156 | MS.gene064722:intron | 50.0% | |
| AAGAAACATACGAGGCGGAG+GGG | - | chr3.4:97541769-97541788 | None:intergenic | 50.0% | |
| ACATGAGATGGGCATGGCAT+GGG | + | chr3.4:97545138-97545157 | MS.gene064722:intron | 50.0% | |
| ACTACGTACTAGGCAGAGGA+TGG | + | chr3.4:97542172-97542191 | MS.gene064722:intron | 50.0% | |
| AGAAAGGGACCACACAGTAC+TGG | + | chr3.4:97545262-97545281 | MS.gene064722:intron | 50.0% | |
| ATCTGAGCATGGAAGAGCTG+AGG | + | chr3.4:97542210-97542229 | MS.gene064722:CDS | 50.0% | |
| CAATCTTAGACGTGAGGGTG+TGG | - | chr3.4:97543940-97543959 | None:intergenic | 50.0% | |
| CTACGTACTAGGCAGAGGAT+GGG | + | chr3.4:97542173-97542192 | MS.gene064722:intron | 50.0% | |
| CTTCACCAACAGCGAATCGT+CGG | + | chr3.4:97542777-97542796 | MS.gene064722:intron | 50.0% | |
| GAAAGAAACATACGAGGCGG+AGG | - | chr3.4:97541771-97541790 | None:intergenic | 50.0% | |
| GCTCCTCCATTGTGAGGATT+AGG | - | chr3.4:97546122-97546141 | None:intergenic | 50.0% | |
| TACGTACTAGGCAGAGGATG+GGG | + | chr3.4:97542174-97542193 | MS.gene064722:intron | 50.0% | |
| TCGCAGCGTGTCGTACAAAA+TGG | + | chr3.4:97542465-97542484 | MS.gene064722:intron | 50.0% | |
| TGAAATGGACAAGGCTGCCA+AGG | + | chr3.4:97542244-97542263 | MS.gene064722:CDS | 50.0% | |
| TTCACCAACAGCGAATCGTC+GGG | + | chr3.4:97542778-97542797 | MS.gene064722:intron | 50.0% | |
| TTCATGAAGCTTGCCAGTGC+TGG | - | chr3.4:97541738-97541757 | None:intergenic | 50.0% | |
| TTGGAGAAGGGAATCGAGAG+GGG | + | chr3.4:97542953-97542972 | MS.gene064722:intron | 50.0% | |
| !! | GGCATGGGGAGTACCAAAAT+TGG | + | chr3.4:97545153-97545172 | MS.gene064722:intron | 50.0% |
| !! | TGTAGTGGACCAGTACTGTG+TGG | - | chr3.4:97545274-97545293 | None:intergenic | 50.0% |
| ACGTACTAGGCAGAGGATGG+GGG | + | chr3.4:97542175-97542194 | MS.gene064722:intron | 55.0% | |
| AGGGTAAGTGGTGAGATCCG+AGG | - | chr3.4:97546153-97546172 | None:intergenic | 55.0% | |
| CAACAGACTCCTGCGTGACT+TGG | + | chr3.4:97545881-97545900 | MS.gene064722:CDS | 55.0% | |
| CAAGGCTATTCGTGAGCGCA+AGG | + | chr3.4:97542262-97542281 | MS.gene064722:CDS | 55.0% | |
| CATGAGATGGGCATGGCATG+GGG | + | chr3.4:97545139-97545158 | MS.gene064722:intron | 55.0% | |
| CTTGCGCTCACGAATAGCCT+TGG | - | chr3.4:97542264-97542283 | None:intergenic | 55.0% | |
| GAAGGGAATCGAGAGGGGAA+TGG | + | chr3.4:97542958-97542977 | MS.gene064722:intron | 55.0% | |
| GCTGATGCTCCTCCATTGTG+AGG | - | chr3.4:97546128-97546147 | None:intergenic | 55.0% | |
| GGAAGAGCTGAGGCTTCTTG+AGG | + | chr3.4:97542220-97542239 | MS.gene064722:CDS | 55.0% | |
| TTCTCCCGACGATTCGCTGT+TGG | - | chr3.4:97542785-97542804 | None:intergenic | 55.0% | |
| ! | GGGGAGTACGAGTCTGTGAT+TGG | + | chr3.4:97546044-97546063 | MS.gene064722:CDS | 55.0% |
| ! | TTAGACGTGAGGGTGTGGGT+GGG | - | chr3.4:97543935-97543954 | None:intergenic | 55.0% |
| ! | CTTAGACGTGAGGGTGTGGG+TGG | - | chr3.4:97543936-97543955 | None:intergenic | 60.0% |
| ! | GTGAGGGTGTGGGTGGGAAT+GGG | - | chr3.4:97543929-97543948 | None:intergenic | 60.0% |
| ! | TTGGCGGGAGCCCCCAATTT+TGG | - | chr3.4:97545169-97545188 | None:intergenic | 60.0% |
| !! | TGGAGGAGCATCAGCTGCCT+CGG | + | chr3.4:97546133-97546152 | MS.gene064722:CDS | 60.0% |
| ! | CGTGAGGGTGTGGGTGGGAA+TGG | - | chr3.4:97543930-97543949 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 97541590 | 97546184 | 97541590 | ID=MS.gene064722 |
| chr3.4 | mRNA | 97541590 | 97546184 | 97541590 | ID=MS.gene064722.t1;Parent=MS.gene064722 |
| chr3.4 | exon | 97541590 | 97541777 | 97541590 | ID=MS.gene064722.t1.exon1;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97541590 | 97541777 | 97541590 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97541874 | 97541940 | 97541874 | ID=MS.gene064722.t1.exon2;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97541874 | 97541940 | 97541874 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97542025 | 97542086 | 97542025 | ID=MS.gene064722.t1.exon3;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97542025 | 97542086 | 97542025 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97542184 | 97542283 | 97542184 | ID=MS.gene064722.t1.exon4;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97542184 | 97542283 | 97542184 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97545738 | 97545779 | 97545738 | ID=MS.gene064722.t1.exon5;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97545738 | 97545779 | 97545738 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97545858 | 97545902 | 97545858 | ID=MS.gene064722.t1.exon6;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97545858 | 97545902 | 97545858 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| chr3.4 | exon | 97545999 | 97546184 | 97545999 | ID=MS.gene064722.t1.exon7;Parent=MS.gene064722.t1 |
| chr3.4 | CDS | 97545999 | 97546184 | 97545999 | ID=cds.MS.gene064722.t1;Parent=MS.gene064722.t1 |
| Gene Sequence |
| Protein sequence |
