Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065020.t1 | XP_013470329.1 | 93.5 | 524 | 28 | 4 | 1 | 523 | 1 | 519 | 3.40E-269 | 937.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065020.t1 | Q9ZVX2 | 48.4 | 535 | 236 | 14 | 6 | 526 | 5 | 513 | 3.4e-108 | 393.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065020.t1 | A0A072VRJ5 | 93.5 | 524 | 28 | 4 | 1 | 523 | 1 | 519 | 2.4e-269 | 937.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene065020.t1 | TF | bHLH |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065020.t1 | MTR_1g112680 | 94.656 | 524 | 22 | 4 | 1 | 523 | 1 | 519 | 0.0 | 1011 |
MS.gene065020.t1 | MTR_8g064700 | 28.846 | 520 | 257 | 13 | 10 | 520 | 4 | 419 | 2.70e-59 | 202 |
MS.gene065020.t1 | MTR_3g498695 | 35.149 | 202 | 113 | 1 | 316 | 517 | 293 | 476 | 2.01e-34 | 135 |
MS.gene065020.t1 | MTR_3g498695 | 34.975 | 203 | 113 | 2 | 316 | 517 | 293 | 477 | 2.43e-33 | 132 |
MS.gene065020.t1 | MTR_7g083900 | 35.644 | 202 | 107 | 4 | 320 | 517 | 285 | 467 | 3.35e-30 | 123 |
MS.gene065020.t1 | MTR_7g083900 | 35.468 | 203 | 107 | 4 | 320 | 517 | 285 | 468 | 5.14e-30 | 123 |
MS.gene065020.t1 | MTR_3g030700 | 33.505 | 194 | 98 | 2 | 311 | 500 | 186 | 352 | 7.79e-25 | 106 |
MS.gene065020.t1 | MTR_2g081040 | 31.000 | 200 | 117 | 4 | 320 | 517 | 176 | 356 | 2.10e-23 | 102 |
MS.gene065020.t1 | MTR_3g104100 | 30.387 | 181 | 108 | 2 | 320 | 500 | 194 | 356 | 2.07e-21 | 96.7 |
MS.gene065020.t1 | MTR_2g038040 | 34.409 | 186 | 102 | 5 | 314 | 496 | 45 | 213 | 6.93e-21 | 92.4 |
MS.gene065020.t1 | MTR_4g091910 | 33.918 | 171 | 80 | 3 | 320 | 490 | 46 | 183 | 2.68e-20 | 89.7 |
MS.gene065020.t1 | MTR_4g091990 | 30.317 | 221 | 99 | 5 | 285 | 497 | 3 | 176 | 2.69e-20 | 89.4 |
MS.gene065020.t1 | MTR_2g084280 | 30.857 | 175 | 81 | 4 | 306 | 477 | 121 | 258 | 7.18e-18 | 85.1 |
MS.gene065020.t1 | MTR_4g057270 | 30.994 | 171 | 70 | 5 | 315 | 473 | 143 | 277 | 3.91e-17 | 83.2 |
MS.gene065020.t1 | MTR_3g111290 | 28.708 | 209 | 106 | 4 | 309 | 516 | 161 | 327 | 9.52e-16 | 79.0 |
MS.gene065020.t1 | MTR_5g030770 | 30.415 | 217 | 97 | 8 | 309 | 516 | 144 | 315 | 2.84e-15 | 77.4 |
MS.gene065020.t1 | MTR_5g030770 | 28.704 | 216 | 96 | 6 | 309 | 516 | 144 | 309 | 4.46e-15 | 76.6 |
MS.gene065020.t1 | MTR_8g098275 | 32.258 | 186 | 110 | 6 | 301 | 479 | 288 | 464 | 4.41e-14 | 75.1 |
MS.gene065020.t1 | MTR_8g098275 | 32.258 | 186 | 110 | 6 | 301 | 479 | 224 | 400 | 4.73e-14 | 74.7 |
MS.gene065020.t1 | MTR_5g014600 | 29.412 | 187 | 110 | 7 | 314 | 499 | 142 | 307 | 6.05e-14 | 73.6 |
MS.gene065020.t1 | MTR_8g024790 | 29.592 | 196 | 97 | 7 | 300 | 487 | 268 | 430 | 7.01e-14 | 74.3 |
MS.gene065020.t1 | MTR_1g072320 | 27.919 | 197 | 109 | 6 | 315 | 502 | 459 | 631 | 7.36e-14 | 74.7 |
MS.gene065020.t1 | MTR_8g098275 | 32.258 | 186 | 110 | 6 | 301 | 479 | 381 | 557 | 7.73e-14 | 74.7 |
MS.gene065020.t1 | MTR_7g096350 | 42.045 | 88 | 50 | 1 | 289 | 376 | 324 | 410 | 1.88e-13 | 73.2 |
MS.gene065020.t1 | MTR_5g030430 | 28.767 | 219 | 127 | 7 | 305 | 515 | 472 | 669 | 3.08e-13 | 72.8 |
MS.gene065020.t1 | MTR_8g027495 | 28.342 | 187 | 98 | 5 | 325 | 511 | 462 | 612 | 5.71e-13 | 72.0 |
MS.gene065020.t1 | MTR_0246s0020 | 25.862 | 174 | 104 | 4 | 313 | 485 | 190 | 339 | 6.27e-13 | 70.9 |
MS.gene065020.t1 | MTR_0246s0020 | 25.862 | 174 | 104 | 4 | 313 | 485 | 190 | 339 | 6.89e-13 | 70.9 |
MS.gene065020.t1 | MTR_8g067280 | 31.325 | 166 | 89 | 5 | 325 | 486 | 466 | 610 | 1.04e-12 | 71.2 |
MS.gene065020.t1 | MTR_0250s0040 | 28.492 | 179 | 100 | 5 | 307 | 485 | 74 | 224 | 1.05e-12 | 68.9 |
MS.gene065020.t1 | MTR_7g117670 | 55.556 | 54 | 24 | 0 | 325 | 378 | 406 | 459 | 2.78e-12 | 69.7 |
MS.gene065020.t1 | MTR_8g024770 | 40.260 | 77 | 44 | 1 | 300 | 374 | 256 | 332 | 8.08e-12 | 67.8 |
MS.gene065020.t1 | MTR_5g014560 | 31.884 | 138 | 79 | 3 | 240 | 376 | 63 | 186 | 1.23e-11 | 66.2 |
MS.gene065020.t1 | MTR_5g014640 | 33.000 | 100 | 60 | 1 | 293 | 385 | 119 | 218 | 1.53e-11 | 66.2 |
MS.gene065020.t1 | MTR_5g014520 | 42.222 | 90 | 47 | 3 | 308 | 397 | 145 | 229 | 2.45e-11 | 65.5 |
MS.gene065020.t1 | MTR_2g104550 | 26.977 | 215 | 123 | 6 | 276 | 485 | 90 | 275 | 2.73e-11 | 65.1 |
MS.gene065020.t1 | MTR_4g092700 | 49.091 | 55 | 28 | 0 | 322 | 376 | 159 | 213 | 4.07e-11 | 64.7 |
MS.gene065020.t1 | MTR_8g066770 | 28.161 | 174 | 105 | 5 | 322 | 492 | 116 | 272 | 4.65e-11 | 64.3 |
MS.gene065020.t1 | MTR_3g099620 | 25.751 | 233 | 134 | 7 | 309 | 520 | 96 | 310 | 4.85e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065020.t1 | AT2G16910 | 48.704 | 540 | 227 | 18 | 6 | 526 | 5 | 513 | 6.54e-149 | 439 |
MS.gene065020.t1 | AT3G26744 | 33.663 | 202 | 109 | 3 | 320 | 517 | 306 | 486 | 4.05e-30 | 124 |
MS.gene065020.t1 | AT3G26744 | 33.663 | 202 | 109 | 3 | 320 | 517 | 306 | 486 | 4.05e-30 | 124 |
MS.gene065020.t1 | AT3G26744 | 33.663 | 202 | 109 | 3 | 320 | 517 | 306 | 486 | 4.05e-30 | 124 |
MS.gene065020.t1 | AT3G26744 | 36.066 | 183 | 93 | 2 | 320 | 499 | 306 | 467 | 1.04e-29 | 122 |
MS.gene065020.t1 | AT1G12860 | 35.176 | 199 | 106 | 3 | 320 | 517 | 266 | 442 | 1.56e-29 | 121 |
MS.gene065020.t1 | AT1G12860 | 36.111 | 180 | 93 | 2 | 320 | 499 | 266 | 423 | 2.13e-28 | 117 |
MS.gene065020.t1 | AT1G10610 | 35.404 | 161 | 88 | 4 | 7 | 157 | 8 | 162 | 9.52e-25 | 107 |
MS.gene065020.t1 | AT1G10610 | 26.829 | 205 | 115 | 4 | 319 | 518 | 262 | 436 | 1.66e-16 | 82.4 |
MS.gene065020.t1 | AT5G57150 | 31.884 | 207 | 116 | 5 | 303 | 504 | 32 | 218 | 1.36e-19 | 88.6 |
MS.gene065020.t1 | AT5G57150 | 31.683 | 202 | 113 | 5 | 303 | 499 | 32 | 213 | 2.58e-19 | 87.4 |
MS.gene065020.t1 | AT5G57150 | 31.683 | 202 | 113 | 5 | 303 | 499 | 33 | 214 | 3.84e-19 | 86.7 |
MS.gene065020.t1 | AT5G57150 | 31.683 | 202 | 113 | 5 | 303 | 499 | 33 | 214 | 4.19e-19 | 86.7 |
MS.gene065020.t1 | AT5G57150 | 31.683 | 202 | 113 | 5 | 303 | 499 | 33 | 214 | 4.89e-19 | 87.4 |
MS.gene065020.t1 | AT2G28160 | 29.878 | 164 | 89 | 4 | 313 | 476 | 123 | 260 | 5.90e-17 | 82.4 |
MS.gene065020.t1 | AT2G28160 | 29.878 | 164 | 89 | 4 | 313 | 476 | 123 | 260 | 6.62e-17 | 82.4 |
MS.gene065020.t1 | AT5G46760 | 32.099 | 162 | 86 | 4 | 325 | 486 | 419 | 556 | 1.22e-16 | 83.6 |
MS.gene065020.t1 | AT1G10610 | 32.836 | 134 | 75 | 3 | 33 | 157 | 5 | 132 | 1.24e-16 | 82.4 |
MS.gene065020.t1 | AT1G10610 | 26.829 | 205 | 115 | 4 | 319 | 518 | 232 | 406 | 1.60e-16 | 82.0 |
MS.gene065020.t1 | AT1G10610 | 26.829 | 205 | 115 | 4 | 319 | 518 | 165 | 339 | 1.55e-16 | 81.6 |
MS.gene065020.t1 | AT4G21330 | 26.601 | 203 | 122 | 4 | 319 | 521 | 30 | 205 | 1.78e-16 | 78.6 |
MS.gene065020.t1 | AT1G63650 | 28.061 | 196 | 123 | 4 | 324 | 515 | 408 | 589 | 3.55e-16 | 82.0 |
MS.gene065020.t1 | AT1G63650 | 28.061 | 196 | 123 | 4 | 324 | 515 | 408 | 589 | 3.55e-16 | 82.0 |
MS.gene065020.t1 | AT1G63650 | 28.061 | 196 | 123 | 4 | 324 | 515 | 408 | 589 | 3.55e-16 | 82.0 |
MS.gene065020.t1 | AT4G29930 | 29.146 | 199 | 118 | 5 | 320 | 509 | 53 | 237 | 5.11e-16 | 78.6 |
MS.gene065020.t1 | AT2G46510 | 44.086 | 93 | 47 | 1 | 306 | 393 | 375 | 467 | 8.83e-16 | 80.9 |
MS.gene065020.t1 | AT5G65640 | 29.224 | 219 | 121 | 5 | 309 | 526 | 166 | 351 | 2.31e-15 | 78.2 |
MS.gene065020.t1 | AT5G10570 | 30.332 | 211 | 99 | 7 | 311 | 516 | 138 | 305 | 4.20e-15 | 76.6 |
MS.gene065020.t1 | AT5G65640 | 57.746 | 71 | 30 | 0 | 309 | 379 | 166 | 236 | 5.92e-15 | 75.9 |
MS.gene065020.t1 | AT4G29930 | 28.804 | 184 | 110 | 4 | 320 | 496 | 53 | 222 | 8.89e-15 | 75.1 |
MS.gene065020.t1 | AT4G29930 | 28.804 | 184 | 110 | 4 | 320 | 496 | 53 | 222 | 8.89e-15 | 75.1 |
MS.gene065020.t1 | AT4G17880 | 28.877 | 187 | 100 | 5 | 305 | 486 | 395 | 553 | 2.37e-14 | 76.3 |
MS.gene065020.t1 | AT4G37850 | 26.842 | 190 | 112 | 4 | 316 | 505 | 147 | 309 | 3.43e-14 | 74.3 |
MS.gene065020.t1 | AT4G37850 | 26.842 | 190 | 112 | 4 | 316 | 505 | 147 | 309 | 3.43e-14 | 74.3 |
MS.gene065020.t1 | AT4G29930 | 55.000 | 60 | 27 | 0 | 320 | 379 | 53 | 112 | 4.56e-14 | 71.2 |
MS.gene065020.t1 | AT4G29930 | 55.000 | 60 | 27 | 0 | 320 | 379 | 53 | 112 | 5.27e-14 | 72.0 |
MS.gene065020.t1 | AT4G29930 | 55.000 | 60 | 27 | 0 | 320 | 379 | 53 | 112 | 5.47e-14 | 72.0 |
MS.gene065020.t1 | AT4G29930 | 55.000 | 60 | 27 | 0 | 320 | 379 | 53 | 112 | 5.87e-14 | 72.0 |
MS.gene065020.t1 | AT5G41315 | 27.136 | 199 | 126 | 6 | 324 | 515 | 444 | 630 | 2.27e-13 | 73.2 |
MS.gene065020.t1 | AT5G41315 | 27.136 | 199 | 126 | 6 | 324 | 515 | 449 | 635 | 2.49e-13 | 73.2 |
MS.gene065020.t1 | AT5G41315 | 27.136 | 199 | 126 | 6 | 324 | 515 | 452 | 638 | 2.52e-13 | 73.2 |
MS.gene065020.t1 | AT4G09820 | 25.789 | 190 | 91 | 3 | 322 | 509 | 364 | 505 | 1.96e-12 | 70.1 |
MS.gene065020.t1 | AT1G01260 | 42.045 | 88 | 49 | 2 | 292 | 378 | 404 | 490 | 2.09e-12 | 70.1 |
MS.gene065020.t1 | AT1G01260 | 42.045 | 88 | 49 | 2 | 292 | 378 | 404 | 490 | 2.09e-12 | 70.1 |
MS.gene065020.t1 | AT1G01260 | 42.045 | 88 | 49 | 2 | 292 | 378 | 404 | 490 | 2.09e-12 | 70.1 |
MS.gene065020.t1 | AT3G24140 | 26.442 | 208 | 126 | 6 | 323 | 518 | 200 | 392 | 3.44e-12 | 68.9 |
MS.gene065020.t1 | AT3G24140 | 26.316 | 209 | 127 | 6 | 322 | 518 | 199 | 392 | 3.73e-12 | 68.6 |
MS.gene065020.t1 | AT4G16430 | 43.421 | 76 | 38 | 1 | 306 | 376 | 300 | 375 | 5.40e-12 | 68.6 |
MS.gene065020.t1 | AT1G32640 | 22.173 | 451 | 267 | 19 | 4 | 376 | 63 | 507 | 4.33e-11 | 65.9 |
MS.gene065020.t1 | AT2G22750 | 26.316 | 171 | 103 | 3 | 315 | 485 | 148 | 295 | 7.75e-11 | 63.9 |
MS.gene065020.t1 | AT4G00870 | 40.323 | 62 | 37 | 0 | 325 | 386 | 253 | 314 | 7.86e-11 | 64.7 |
MS.gene065020.t1 | AT2G22750 | 26.316 | 171 | 103 | 3 | 315 | 485 | 148 | 295 | 8.02e-11 | 63.9 |
MS.gene065020.t1 | AT2G22750 | 26.316 | 171 | 103 | 3 | 315 | 485 | 144 | 291 | 8.31e-11 | 63.9 |
MS.gene065020.t1 | AT3G06120 | 27.322 | 183 | 115 | 6 | 322 | 499 | 3 | 172 | 9.14e-11 | 62.0 |
Find 105 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACATTGTTATTATTATTATT+TGG | 0.194014 | 1.2:-83391322 | None:intergenic |
CTATCAAGCTTTGAGATTCT+TGG | 0.205780 | 1.2:-83391160 | None:intergenic |
CTCTTGTTGGTTTGAATGGC+TGG | 0.239275 | 1.2:+83389300 | MS.gene065020:CDS |
TGAAATCCATGTTCTGCTTT+TGG | 0.239465 | 1.2:-83391346 | None:intergenic |
CTTGATAGAGCATCTATTCT+TGG | 0.248227 | 1.2:+83391175 | MS.gene065020:CDS |
CAGCAACAAGGTTCTTTGAT+TGG | 0.308174 | 1.2:-83391081 | None:intergenic |
GTGGAAGTGGCTCAGATAGA+TGG | 0.338551 | 1.2:+83391592 | MS.gene065020:CDS |
GATGTTCTTCTCCACCATTT+TGG | 0.343592 | 1.2:-83389521 | None:intergenic |
GTTATATAACCTTCGTTCAT+TGG | 0.349149 | 1.2:+83391135 | MS.gene065020:CDS |
AGATCACAAGAGTTTGTTCT+TGG | 0.351468 | 1.2:-83389585 | None:intergenic |
GAACTTACATGTAAAGTGTT+TGG | 0.359394 | 1.2:-83389806 | None:intergenic |
GAAGGAAGAAACTGAATGAT+AGG | 0.368436 | 1.2:+83391113 | MS.gene065020:CDS |
CAAATCTTCATGCTGGAACT+TGG | 0.371640 | 1.2:+83391963 | MS.gene065020:CDS |
AGACCTCTTGTTGGTTTGAA+TGG | 0.376737 | 1.2:+83389296 | MS.gene065020:CDS |
GTGTTTGGATCCAAGCTATT+GGG | 0.381111 | 1.2:-83389791 | None:intergenic |
TAGGTATGGAAGTGGAAAGT+TGG | 0.382059 | 1.2:-83389614 | None:intergenic |
ATTGGGATAGTTCAACCAAT+TGG | 0.386734 | 1.2:-83389774 | None:intergenic |
ATGCAATCAAATCCAATTGT+AGG | 0.403963 | 1.2:+83390659 | MS.gene065020:CDS |
GATTCCAGTGCCTGGTGGAC+TGG | 0.406904 | 1.2:+83389965 | MS.gene065020:CDS |
CAGAACATGGATTTCATGTT+GGG | 0.411727 | 1.2:+83391353 | MS.gene065020:CDS |
TTTATATACCCTGAATCTAT+AGG | 0.413784 | 1.2:-83389633 | None:intergenic |
TGAGCTCTTTGTAACTAAAC+AGG | 0.419409 | 1.2:+83389989 | MS.gene065020:CDS |
GGTTGGGATGTTGTTGTGGT+GGG | 0.420257 | 1.2:+83389487 | MS.gene065020:CDS |
AAGAGGATGATGGAAAATAT+AGG | 0.425274 | 1.2:+83391038 | MS.gene065020:CDS |
AGTGTTTGGATCCAAGCTAT+TGG | 0.426318 | 1.2:-83389792 | None:intergenic |
ACTTCCATACCTATAGATTC+AGG | 0.426419 | 1.2:+83389624 | MS.gene065020:CDS |
TTTCCCTGTCTCTTCATGTA+GGG | 0.439137 | 1.2:+83389545 | MS.gene065020:CDS |
TTGGGATAGTTCAACCAATT+GGG | 0.440118 | 1.2:-83389773 | None:intergenic |
TATTAACTAACCAACCCAAT+TGG | 0.442270 | 1.2:+83389759 | MS.gene065020:CDS |
TATAGGAGAAGAAGTGGAAA+AGG | 0.445604 | 1.2:+83391055 | MS.gene065020:CDS |
AGGTATGGAAGTGGAAAGTT+GGG | 0.445933 | 1.2:-83389613 | None:intergenic |
GAGAGATTAAGACCTCTTGT+TGG | 0.450531 | 1.2:+83389287 | MS.gene065020:CDS |
GAAGGGATGAACCACTCAAT+TGG | 0.450600 | 1.2:+83390617 | MS.gene065020:CDS |
ATGGAGGCTTTGAACACTTT+AGG | 0.460171 | 1.2:+83391673 | MS.gene065020:CDS |
TTATATATAGGTATCTTGAA+TGG | 0.460510 | 1.2:+83389466 | MS.gene065020:intron |
AGTAACTGTGTATATGTTGA+TGG | 0.466614 | 1.2:+83391286 | MS.gene065020:CDS |
ATCATGCACCTCTTCTGTGT+TGG | 0.467913 | 1.2:-83390891 | None:intergenic |
TGGTTGGGATGTTGTTGTGG+TGG | 0.468844 | 1.2:+83389486 | MS.gene065020:CDS |
ATATAGGTATCTTGAATGGT+TGG | 0.468983 | 1.2:+83389470 | MS.gene065020:intron |
GCAGAACATGGATTTCATGT+TGG | 0.469960 | 1.2:+83391352 | MS.gene065020:CDS |
GGAAAATATAGGAGAAGAAG+TGG | 0.472548 | 1.2:+83391049 | MS.gene065020:CDS |
GATCACAAGAGTTTGTTCTT+GGG | 0.473126 | 1.2:-83389584 | None:intergenic |
TCTTGTTGGTTTGAATGGCT+GGG | 0.473478 | 1.2:+83389301 | MS.gene065020:CDS |
GATTCAATGTCTCTGATGAA+TGG | 0.473958 | 1.2:-83390718 | None:intergenic |
AAGAAGCAAGAACATGTTGT+TGG | 0.475916 | 1.2:+83390974 | MS.gene065020:CDS |
GCTGGGATTACTGTGTCTAC+TGG | 0.476054 | 1.2:+83389318 | MS.gene065020:CDS |
GGCTTTGAACACTTTAGGCA+TGG | 0.486692 | 1.2:+83391678 | MS.gene065020:CDS |
ATGAATATTGCAGGCACAAG+TGG | 0.489997 | 1.2:+83391573 | MS.gene065020:intron |
TATAGGTATCTTGAATGGTT+GGG | 0.493698 | 1.2:+83389471 | MS.gene065020:intron |
GTTGAACTATCCCAATAGCT+TGG | 0.501147 | 1.2:+83389781 | MS.gene065020:CDS |
TAACAATCAATATATGTTTG+TGG | 0.501838 | 1.2:+83390934 | MS.gene065020:CDS |
CAGAATGAAGAAGAGGATGA+TGG | 0.501916 | 1.2:+83391028 | MS.gene065020:CDS |
ATTGAACAGGATTCATGCAC+AGG | 0.504490 | 1.2:+83389733 | MS.gene065020:intron |
TTCTCTTCCTCTCAGCAACA+AGG | 0.506548 | 1.2:-83391093 | None:intergenic |
GAATGGTTGGGATGTTGTTG+TGG | 0.510919 | 1.2:+83389483 | MS.gene065020:CDS |
GTATCCCTACATGAAGAGAC+AGG | 0.511754 | 1.2:-83389549 | None:intergenic |
ATACCCTGAATCTATAGGTA+TGG | 0.513797 | 1.2:-83389628 | None:intergenic |
GGGAGTGAAAGCAACCAAAA+TGG | 0.520448 | 1.2:+83389507 | MS.gene065020:CDS |
TGGAAGTGGCTCAGATAGAT+GGG | 0.522256 | 1.2:+83391593 | MS.gene065020:CDS |
TGAGACAAGACCCTTGTGAC+TGG | 0.522381 | 1.2:-83391722 | None:intergenic |
CATGGATTTCATGTTGGGAA+TGG | 0.525371 | 1.2:+83391358 | MS.gene065020:CDS |
ATTGCAGGCACAAGTGGAAG+TGG | 0.525672 | 1.2:+83391579 | MS.gene065020:intron |
TGAATCTATAGGTATGGAAG+TGG | 0.528440 | 1.2:-83389622 | None:intergenic |
CACGGAACAAATCTTCATGC+TGG | 0.531543 | 1.2:+83391956 | MS.gene065020:CDS |
CTTCCATACCTATAGATTCA+GGG | 0.537250 | 1.2:+83389625 | MS.gene065020:CDS |
ACCTTGGTATTCTTCAGAGA+AGG | 0.541843 | 1.2:-83390828 | None:intergenic |
CTATGTTTCAAAACAAAAGC+AGG | 0.545019 | 1.2:+83391381 | MS.gene065020:CDS |
GGAAATTAAGTGAAGATCAA+AGG | 0.546606 | 1.2:+83389339 | MS.gene065020:CDS |
ATCAATTTCACAAAACCACC+TGG | 0.550671 | 1.2:-83391652 | None:intergenic |
GATAGTTCAACCAATTGGGT+TGG | 0.554141 | 1.2:-83389769 | None:intergenic |
CAGGCACTGGAATCAAAACA+TGG | 0.559119 | 1.2:-83389956 | None:intergenic |
CAGTGATCAGAATGAAGAAG+AGG | 0.559858 | 1.2:+83391021 | MS.gene065020:CDS |
TTGTTGCTGAGAGGAAGAGA+AGG | 0.562094 | 1.2:+83391095 | MS.gene065020:CDS |
ATTGTAGGTGATGAAAATGA+TGG | 0.563751 | 1.2:+83390674 | MS.gene065020:CDS |
AAGAGCTCAACCAGTCCACC+AGG | 0.565516 | 1.2:-83389975 | None:intergenic |
CTGTGTCTGTTTGTCAGTAA+CGG | 0.566740 | 1.2:-83391416 | None:intergenic |
GATCATGAAGAAAAGAACCT+TGG | 0.576590 | 1.2:-83390844 | None:intergenic |
TCAACCAGTCCACCAGGCAC+TGG | 0.579883 | 1.2:-83389969 | None:intergenic |
AAACAAAAGCAGGAAGATGT+TGG | 0.583119 | 1.2:+83391391 | MS.gene065020:CDS |
ATCTCAATGCATTGTCATGG+TGG | 0.583356 | 1.2:+83390589 | MS.gene065020:CDS |
AAAGGAGAGTGAAATAGTTG+AGG | 0.586665 | 1.2:+83391900 | MS.gene065020:CDS |
CACATCTCAATGCATTGTCA+TGG | 0.588350 | 1.2:+83390586 | MS.gene065020:CDS |
TTGAATTGAAGCCAATTGAG+TGG | 0.597436 | 1.2:-83390628 | None:intergenic |
TTCAATACAGATATGTCATG+TGG | 0.598259 | 1.2:-83390743 | None:intergenic |
AGAGCTTCAAGATGAACTTG+AGG | 0.601650 | 1.2:+83391240 | MS.gene065020:CDS |
AATGTTCCAAAAGCAGAACA+TGG | 0.606756 | 1.2:+83391340 | MS.gene065020:CDS |
TCTCAAATCCAACACAGAAG+AGG | 0.606938 | 1.2:+83390883 | MS.gene065020:CDS |
TGACAAACAGACACAGCAGA+TGG | 0.608522 | 1.2:+83391423 | MS.gene065020:CDS |
CAAAGAACCTTGTTGCTGAG+AGG | 0.619036 | 1.2:+83391086 | MS.gene065020:CDS |
CTTGAGGAAAATTCAGACAC+AGG | 0.625559 | 1.2:+83391256 | MS.gene065020:CDS |
TGCCACAGTAACCAGTCACA+AGG | 0.625627 | 1.2:+83391711 | MS.gene065020:CDS |
AGATGCTATTGAATTTGTGA+AGG | 0.628469 | 1.2:+83391198 | MS.gene065020:CDS |
CAGCCATTCAAACCAACAAG+AGG | 0.632565 | 1.2:-83389299 | None:intergenic |
AGTGAAAGCAACCAAAATGG+TGG | 0.646392 | 1.2:+83389510 | MS.gene065020:CDS |
ATTCACTACTAGAGCTGACA+CGG | 0.647595 | 1.2:+83391938 | MS.gene065020:CDS |
TTCTTGGAACCAATGAACGA+AGG | 0.654816 | 1.2:-83391144 | None:intergenic |
ACCCTTGTGACTGGTTACTG+TGG | 0.657104 | 1.2:-83391713 | None:intergenic |
ATTGTCATGGTGGATCATGA+AGG | 0.663490 | 1.2:+83390599 | MS.gene065020:CDS |
TTGTCATGGTGGATCATGAA+GGG | 0.669599 | 1.2:+83390600 | MS.gene065020:CDS |
CAAACAGACACAGCAGATGG+AGG | 0.675468 | 1.2:+83391426 | MS.gene065020:CDS |
TGGGAATGAGTACTTTGTGA+AGG | 0.678653 | 1.2:+83391612 | MS.gene065020:CDS |
TATCCCTACATGAAGAGACA+GGG | 0.687876 | 1.2:-83389548 | None:intergenic |
ACCTTCTCTGAAGAATACCA+AGG | 0.692673 | 1.2:+83390827 | MS.gene065020:CDS |
GCCACAGTAACCAGTCACAA+GGG | 0.696830 | 1.2:+83391712 | MS.gene065020:CDS |
AGGCACTGGAATCAAAACAT+GGG | 0.706180 | 1.2:-83389955 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTTATTAGTATATTTATTT+AGG | - | chr1.2:83390510-83390529 | None:intergenic | 10.0% |
!! | ATATAATAGAACAAAAAATA+TGG | - | chr1.2:83389398-83389417 | None:intergenic | 10.0% |
!!! | AAAATTTTAAATTAAGCTAA+AGG | - | chr1.2:83390090-83390109 | None:intergenic | 10.0% |
!!! | ACATTGTTATTATTATTATT+TGG | - | chr1.2:83391325-83391344 | None:intergenic | 10.0% |
!! | ATATAATTATGAACAGAAAA+AGG | + | chr1.2:83391882-83391901 | MS.gene065020:intron | 15.0% |
!! | ATGATATTAAATTTCTTTCT+TGG | + | chr1.2:83391850-83391869 | MS.gene065020:intron | 15.0% |
!! | CATAATAAAAATATGAAGTT+CGG | + | chr1.2:83390381-83390400 | MS.gene065020:intron | 15.0% |
!! | TGATATTAAATTTCTTTCTT+GGG | + | chr1.2:83391851-83391870 | MS.gene065020:intron | 15.0% |
!!! | AATAAATTTTAGTATAAGCT+AGG | - | chr1.2:83391462-83391481 | None:intergenic | 15.0% |
!!! | ATTTGTTGGTTTTTATATAT+AGG | + | chr1.2:83389454-83389473 | MS.gene065020:intron | 15.0% |
!! | AAACACACATATATATAAGT+AGG | + | chr1.2:83390040-83390059 | MS.gene065020:intron | 20.0% |
!! | AATTCATAAGTTAACAAACA+AGG | - | chr1.2:83391788-83391807 | None:intergenic | 20.0% |
!! | AGACAAATTCAAATCAAAAT+AGG | + | chr1.2:83391817-83391836 | MS.gene065020:intron | 20.0% |
!! | AGATGAATTAGTTGAAAAAT+AGG | - | chr1.2:83389847-83389866 | None:intergenic | 20.0% |
!! | GTACTCAATATATCAATATA+TGG | - | chr1.2:83389908-83389927 | None:intergenic | 20.0% |
!! | TAACAATCAATATATGTTTG+TGG | + | chr1.2:83390934-83390953 | MS.gene065020:CDS | 20.0% |
!! | TATAAGTAGGTAGATATAAA+TGG | + | chr1.2:83390053-83390072 | MS.gene065020:intron | 20.0% |
!! | TCATTGAACGATATATTATA+AGG | + | chr1.2:83390193-83390212 | MS.gene065020:intron | 20.0% |
!! | TTATATATAGGTATCTTGAA+TGG | + | chr1.2:83389466-83389485 | MS.gene065020:intron | 20.0% |
!!! | CTTTTTTGAATTATCAAGTA+AGG | + | chr1.2:83390348-83390367 | MS.gene065020:intron | 20.0% |
!!! | TAAGATCATGTTAATTTTGA+TGG | + | chr1.2:83390291-83390310 | MS.gene065020:intron | 20.0% |
!!! | TAATTGTGATGTTAATTTGT+TGG | + | chr1.2:83389440-83389459 | MS.gene065020:intron | 20.0% |
!!! | TTTTTCAACTAATTCATCTT+TGG | + | chr1.2:83389848-83389867 | MS.gene065020:intron | 20.0% |
! | CTCTTTGTGTATAATATAAC+AGG | + | chr1.2:83390532-83390551 | MS.gene065020:intron | 25.0% |
! | GAGATTATAGATAGAGTAAA+GGG | - | chr1.2:83389700-83389719 | None:intergenic | 25.0% |
! | GCTTAATTTACATATTGAAC+TGG | + | chr1.2:83390133-83390152 | MS.gene065020:intron | 25.0% |
! | GGTCTAATTATGATATTGAA+TGG | - | chr1.2:83390228-83390247 | None:intergenic | 25.0% |
! | TATATGGAATTAGCTGAAAA+AGG | - | chr1.2:83389892-83389911 | None:intergenic | 25.0% |
! | TTGTGTATAATATAACAGGT+TGG | + | chr1.2:83390536-83390555 | MS.gene065020:intron | 25.0% |
! | TTTATATACCCTGAATCTAT+AGG | - | chr1.2:83389636-83389655 | None:intergenic | 25.0% |
!! | GAATTATCAAGTAAGGTTTT+TGG | + | chr1.2:83390355-83390374 | MS.gene065020:intron | 25.0% |
!! | TTTTGCAGGAAACAATTAAT+GGG | + | chr1.2:83389931-83389950 | MS.gene065020:intron | 25.0% |
!! | TTTTTGCAGGAAACAATTAA+TGG | + | chr1.2:83389930-83389949 | MS.gene065020:intron | 25.0% |
!!! | ATATTGAGTACTATTTTTGC+AGG | + | chr1.2:83389917-83389936 | MS.gene065020:intron | 25.0% |
!!! | CTCAAATGTTTTTAAAGTTG+AGG | + | chr1.2:83391741-83391760 | MS.gene065020:CDS | 25.0% |
AGATGCTATTGAATTTGTGA+AGG | + | chr1.2:83391198-83391217 | MS.gene065020:CDS | 30.0% | |
AGTAACTGTGTATATGTTGA+TGG | + | chr1.2:83391286-83391305 | MS.gene065020:CDS | 30.0% | |
ATATAGGTATCTTGAATGGT+TGG | + | chr1.2:83389470-83389489 | MS.gene065020:intron | 30.0% | |
ATGCAATCAAATCCAATTGT+AGG | + | chr1.2:83390659-83390678 | MS.gene065020:CDS | 30.0% | |
ATTATAGATAGAGTAAAGGG+AGG | - | chr1.2:83389697-83389716 | None:intergenic | 30.0% | |
ATTGTAGGTGATGAAAATGA+TGG | + | chr1.2:83390674-83390693 | MS.gene065020:CDS | 30.0% | |
CACATGAATATGAATATTGC+AGG | + | chr1.2:83391564-83391583 | MS.gene065020:intron | 30.0% | |
CACTTTACATGTAAGTTCAT+TGG | + | chr1.2:83389811-83389830 | MS.gene065020:intron | 30.0% | |
CTATGTTTCAAAACAAAAGC+AGG | + | chr1.2:83391381-83391400 | MS.gene065020:CDS | 30.0% | |
CTGTTCAATGAAGAGATTAA+AGG | - | chr1.2:83389722-83389741 | None:intergenic | 30.0% | |
CTTTAATCTCTTCATTGAAC+AGG | + | chr1.2:83389720-83389739 | MS.gene065020:intron | 30.0% | |
GATCTTGATGTTGTTAACAA+GGG | - | chr1.2:83390249-83390268 | None:intergenic | 30.0% | |
GGAAATTAAGTGAAGATCAA+AGG | + | chr1.2:83389339-83389358 | MS.gene065020:CDS | 30.0% | |
GGAGATTATAGATAGAGTAA+AGG | - | chr1.2:83389701-83389720 | None:intergenic | 30.0% | |
GTTATATAACCTTCGTTCAT+TGG | + | chr1.2:83391135-83391154 | MS.gene065020:CDS | 30.0% | |
TATAGGTATCTTGAATGGTT+GGG | + | chr1.2:83389471-83389490 | MS.gene065020:intron | 30.0% | |
TATTAACTAACCAACCCAAT+TGG | + | chr1.2:83389759-83389778 | MS.gene065020:CDS | 30.0% | |
TGATCTTGATGTTGTTAACA+AGG | - | chr1.2:83390250-83390269 | None:intergenic | 30.0% | |
TTATAGATAGAGTAAAGGGA+GGG | - | chr1.2:83389696-83389715 | None:intergenic | 30.0% | |
TTCAATACAGATATGTCATG+TGG | - | chr1.2:83390746-83390765 | None:intergenic | 30.0% | |
! | GAACTTACATGTAAAGTGTT+TGG | - | chr1.2:83389809-83389828 | None:intergenic | 30.0% |
! | TCATTTTCATCACCTACAAT+TGG | - | chr1.2:83390674-83390693 | None:intergenic | 30.0% |
!! | AAGAGGATGATGGAAAATAT+AGG | + | chr1.2:83391038-83391057 | MS.gene065020:CDS | 30.0% |
!!! | GCTTCTTTTTTGTGTCTAAT+GGG | - | chr1.2:83390961-83390980 | None:intergenic | 30.0% |
!!! | TGCTTCTTTTTTGTGTCTAA+TGG | - | chr1.2:83390962-83390981 | None:intergenic | 30.0% |
AAACAAAAGCAGGAAGATGT+TGG | + | chr1.2:83391391-83391410 | MS.gene065020:CDS | 35.0% | |
AAAGGAGAGTGAAATAGTTG+AGG | + | chr1.2:83391900-83391919 | MS.gene065020:CDS | 35.0% | |
AAGAAGCAAGAACATGTTGT+TGG | + | chr1.2:83390974-83390993 | MS.gene065020:CDS | 35.0% | |
AATGTTCCAAAAGCAGAACA+TGG | + | chr1.2:83391340-83391359 | MS.gene065020:CDS | 35.0% | |
ACTTCCATACCTATAGATTC+AGG | + | chr1.2:83389624-83389643 | MS.gene065020:CDS | 35.0% | |
ATACCCTGAATCTATAGGTA+TGG | - | chr1.2:83389631-83389650 | None:intergenic | 35.0% | |
ATCAATTTCACAAAACCACC+TGG | - | chr1.2:83391655-83391674 | None:intergenic | 35.0% | |
ATTGGGATAGTTCAACCAAT+TGG | - | chr1.2:83389777-83389796 | None:intergenic | 35.0% | |
CAGAACATGGATTTCATGTT+GGG | + | chr1.2:83391353-83391372 | MS.gene065020:CDS | 35.0% | |
CTTCCATACCTATAGATTCA+GGG | + | chr1.2:83389625-83389644 | MS.gene065020:CDS | 35.0% | |
GAAGGAAGAAACTGAATGAT+AGG | + | chr1.2:83391113-83391132 | MS.gene065020:CDS | 35.0% | |
GATCATGAAGAAAAGAACCT+TGG | - | chr1.2:83390847-83390866 | None:intergenic | 35.0% | |
GATTCAATGTCTCTGATGAA+TGG | - | chr1.2:83390721-83390740 | None:intergenic | 35.0% | |
GGAAAATATAGGAGAAGAAG+TGG | + | chr1.2:83391049-83391068 | MS.gene065020:CDS | 35.0% | |
TATACAAGCGTCAAAGATGT+TGG | - | chr1.2:83390408-83390427 | None:intergenic | 35.0% | |
TATAGGAGAAGAAGTGGAAA+AGG | + | chr1.2:83391055-83391074 | MS.gene065020:CDS | 35.0% | |
TGAATCTATAGGTATGGAAG+TGG | - | chr1.2:83389625-83389644 | None:intergenic | 35.0% | |
TGAGCTCTTTGTAACTAAAC+AGG | + | chr1.2:83389989-83390008 | MS.gene065020:CDS | 35.0% | |
TTGAATTGAAGCCAATTGAG+TGG | - | chr1.2:83390631-83390650 | None:intergenic | 35.0% | |
TTGGGATAGTTCAACCAATT+GGG | - | chr1.2:83389776-83389795 | None:intergenic | 35.0% | |
TTTAGGCAAAACTGCATCAA+AGG | - | chr1.2:83390493-83390512 | None:intergenic | 35.0% | |
! | AGATCACAAGAGTTTGTTCT+TGG | - | chr1.2:83389588-83389607 | None:intergenic | 35.0% |
! | CTTGATAGAGCATCTATTCT+TGG | + | chr1.2:83391175-83391194 | MS.gene065020:CDS | 35.0% |
! | GATCACAAGAGTTTGTTCTT+GGG | - | chr1.2:83389587-83389606 | None:intergenic | 35.0% |
! | TGAAATCCATGTTCTGCTTT+TGG | - | chr1.2:83391349-83391368 | None:intergenic | 35.0% |
!! | CTATCAAGCTTTGAGATTCT+TGG | - | chr1.2:83391163-83391182 | None:intergenic | 35.0% |
!!! | AGGTGGTTTTGTGAAATTGA+TGG | + | chr1.2:83391654-83391673 | MS.gene065020:CDS | 35.0% |
!!! | TGGTTTTGTGAAATTGATGG+AGG | + | chr1.2:83391657-83391676 | MS.gene065020:CDS | 35.0% |
ACCTTGGTATTCTTCAGAGA+AGG | - | chr1.2:83390831-83390850 | None:intergenic | 40.0% | |
AGAGCTTCAAGATGAACTTG+AGG | + | chr1.2:83391240-83391259 | MS.gene065020:CDS | 40.0% | |
AGGTATGGAAGTGGAAAGTT+GGG | - | chr1.2:83389616-83389635 | None:intergenic | 40.0% | |
AGTGAAAGCAACCAAAATGG+TGG | + | chr1.2:83389510-83389529 | MS.gene065020:CDS | 40.0% | |
AGTGTTTGGATCCAAGCTAT+TGG | - | chr1.2:83389795-83389814 | None:intergenic | 40.0% | |
ATCTCAATGCATTGTCATGG+TGG | + | chr1.2:83390589-83390608 | MS.gene065020:CDS | 40.0% | |
ATGAATATTGCAGGCACAAG+TGG | + | chr1.2:83391573-83391592 | MS.gene065020:intron | 40.0% | |
ATTCACTACTAGAGCTGACA+CGG | + | chr1.2:83391938-83391957 | MS.gene065020:CDS | 40.0% | |
ATTGAACAGGATTCATGCAC+AGG | + | chr1.2:83389733-83389752 | MS.gene065020:intron | 40.0% | |
CAAATCTTCATGCTGGAACT+TGG | + | chr1.2:83391963-83391982 | MS.gene065020:CDS | 40.0% | |
CACATCTCAATGCATTGTCA+TGG | + | chr1.2:83390586-83390605 | MS.gene065020:CDS | 40.0% | |
CAGAATGAAGAAGAGGATGA+TGG | + | chr1.2:83391028-83391047 | MS.gene065020:CDS | 40.0% | |
CAGCAACAAGGTTCTTTGAT+TGG | - | chr1.2:83391084-83391103 | None:intergenic | 40.0% | |
CAGTGATCAGAATGAAGAAG+AGG | + | chr1.2:83391021-83391040 | MS.gene065020:CDS | 40.0% | |
CATGGATTTCATGTTGGGAA+TGG | + | chr1.2:83391358-83391377 | MS.gene065020:CDS | 40.0% | |
CTGTGTCTGTTTGTCAGTAA+CGG | - | chr1.2:83391419-83391438 | None:intergenic | 40.0% | |
CTTGAGGAAAATTCAGACAC+AGG | + | chr1.2:83391256-83391275 | MS.gene065020:CDS | 40.0% | |
GAGAGATTAAGACCTCTTGT+TGG | + | chr1.2:83389287-83389306 | MS.gene065020:CDS | 40.0% | |
GATAGTTCAACCAATTGGGT+TGG | - | chr1.2:83389772-83389791 | None:intergenic | 40.0% | |
GCAGAACATGGATTTCATGT+TGG | + | chr1.2:83391352-83391371 | MS.gene065020:CDS | 40.0% | |
GTGTTTGGATCCAAGCTATT+GGG | - | chr1.2:83389794-83389813 | None:intergenic | 40.0% | |
GTTGAACTATCCCAATAGCT+TGG | + | chr1.2:83389781-83389800 | MS.gene065020:CDS | 40.0% | |
TAGGTATGGAAGTGGAAAGT+TGG | - | chr1.2:83389617-83389636 | None:intergenic | 40.0% | |
TATCCCTACATGAAGAGACA+GGG | - | chr1.2:83389551-83389570 | None:intergenic | 40.0% | |
TCTCAAATCCAACACAGAAG+AGG | + | chr1.2:83390883-83390902 | MS.gene065020:CDS | 40.0% | |
TGGGAATGAGTACTTTGTGA+AGG | + | chr1.2:83391612-83391631 | MS.gene065020:CDS | 40.0% | |
TTCTTGGAACCAATGAACGA+AGG | - | chr1.2:83391147-83391166 | None:intergenic | 40.0% | |
TTTCCCTGTCTCTTCATGTA+GGG | + | chr1.2:83389545-83389564 | MS.gene065020:CDS | 40.0% | |
! | ACCTTCTCTGAAGAATACCA+AGG | + | chr1.2:83390827-83390846 | MS.gene065020:CDS | 40.0% |
! | GATGTTCTTCTCCACCATTT+TGG | - | chr1.2:83389524-83389543 | None:intergenic | 40.0% |
! | TTTTCCCTGTCTCTTCATGT+AGG | + | chr1.2:83389544-83389563 | MS.gene065020:CDS | 40.0% |
!! | AGACCTCTTGTTGGTTTGAA+TGG | + | chr1.2:83389296-83389315 | MS.gene065020:CDS | 40.0% |
!! | AGGCACTGGAATCAAAACAT+GGG | - | chr1.2:83389958-83389977 | None:intergenic | 40.0% |
!! | ATGGAGGCTTTGAACACTTT+AGG | + | chr1.2:83391673-83391692 | MS.gene065020:CDS | 40.0% |
!! | ATTGTCATGGTGGATCATGA+AGG | + | chr1.2:83390599-83390618 | MS.gene065020:CDS | 40.0% |
!! | TCTTGTTGGTTTGAATGGCT+GGG | + | chr1.2:83389301-83389320 | MS.gene065020:CDS | 40.0% |
!! | TTGTCATGGTGGATCATGAA+GGG | + | chr1.2:83390600-83390619 | MS.gene065020:CDS | 40.0% |
ATCATGCACCTCTTCTGTGT+TGG | - | chr1.2:83390894-83390913 | None:intergenic | 45.0% | |
CAAAGAACCTTGTTGCTGAG+AGG | + | chr1.2:83391086-83391105 | MS.gene065020:CDS | 45.0% | |
CACGGAACAAATCTTCATGC+TGG | + | chr1.2:83391956-83391975 | MS.gene065020:CDS | 45.0% | |
CAGCCATTCAAACCAACAAG+AGG | - | chr1.2:83389302-83389321 | None:intergenic | 45.0% | |
GAAGGGATGAACCACTCAAT+TGG | + | chr1.2:83390617-83390636 | MS.gene065020:CDS | 45.0% | |
GAATGGTTGGGATGTTGTTG+TGG | + | chr1.2:83389483-83389502 | MS.gene065020:CDS | 45.0% | |
GGGAGTGAAAGCAACCAAAA+TGG | + | chr1.2:83389507-83389526 | MS.gene065020:CDS | 45.0% | |
GTATCCCTACATGAAGAGAC+AGG | - | chr1.2:83389552-83389571 | None:intergenic | 45.0% | |
TGACAAACAGACACAGCAGA+TGG | + | chr1.2:83391423-83391442 | MS.gene065020:CDS | 45.0% | |
TGGAAGTGGCTCAGATAGAT+GGG | + | chr1.2:83391593-83391612 | MS.gene065020:CDS | 45.0% | |
TTCTCTTCCTCTCAGCAACA+AGG | - | chr1.2:83391096-83391115 | None:intergenic | 45.0% | |
TTGTTGCTGAGAGGAAGAGA+AGG | + | chr1.2:83391095-83391114 | MS.gene065020:CDS | 45.0% | |
!! | CAGGCACTGGAATCAAAACA+TGG | - | chr1.2:83389959-83389978 | None:intergenic | 45.0% |
!! | CTCTTGTTGGTTTGAATGGC+TGG | + | chr1.2:83389300-83389319 | MS.gene065020:CDS | 45.0% |
!! | GGCTTTGAACACTTTAGGCA+TGG | + | chr1.2:83391678-83391697 | MS.gene065020:CDS | 45.0% |
!!! | CATGTTTTGATTCCAGTGCC+TGG | + | chr1.2:83389957-83389976 | MS.gene065020:CDS | 45.0% |
!! | TTATTATATATTAATAACAA+AGG | + | chr1.2:83391477-83391496 | MS.gene065020:intron | 5.0% |
ATTGCAGGCACAAGTGGAAG+TGG | + | chr1.2:83391579-83391598 | MS.gene065020:intron | 50.0% | |
CAAACAGACACAGCAGATGG+AGG | + | chr1.2:83391426-83391445 | MS.gene065020:CDS | 50.0% | |
GCCACAGTAACCAGTCACAA+GGG | + | chr1.2:83391712-83391731 | MS.gene065020:CDS | 50.0% | |
GCTGGGATTACTGTGTCTAC+TGG | + | chr1.2:83389318-83389337 | MS.gene065020:CDS | 50.0% | |
GGTTGGGATGTTGTTGTGGT+GGG | + | chr1.2:83389487-83389506 | MS.gene065020:CDS | 50.0% | |
GTGGAAGTGGCTCAGATAGA+TGG | + | chr1.2:83391592-83391611 | MS.gene065020:CDS | 50.0% | |
TGAGACAAGACCCTTGTGAC+TGG | - | chr1.2:83391725-83391744 | None:intergenic | 50.0% | |
TGCCACAGTAACCAGTCACA+AGG | + | chr1.2:83391711-83391730 | MS.gene065020:CDS | 50.0% | |
TGGTTGGGATGTTGTTGTGG+TGG | + | chr1.2:83389486-83389505 | MS.gene065020:CDS | 50.0% | |
! | ACCCTTGTGACTGGTTACTG+TGG | - | chr1.2:83391716-83391735 | None:intergenic | 50.0% |
! | GTGTTTTGTGAGCACAAGCC+AGG | + | chr1.2:83391634-83391653 | MS.gene065020:CDS | 50.0% |
! | TTTTGTGAGCACAAGCCAGG+TGG | + | chr1.2:83391637-83391656 | MS.gene065020:CDS | 50.0% |
!!! | GTTTTGATTCCAGTGCCTGG+TGG | + | chr1.2:83389960-83389979 | MS.gene065020:CDS | 50.0% |
AAGAGCTCAACCAGTCCACC+AGG | - | chr1.2:83389978-83389997 | None:intergenic | 55.0% | |
TCAACCAGTCCACCAGGCAC+TGG | - | chr1.2:83389972-83389991 | None:intergenic | 60.0% | |
! | GATTCCAGTGCCTGGTGGAC+TGG | + | chr1.2:83389965-83389984 | MS.gene065020:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 83389257 | 83391993 | 83389257 | ID=MS.gene065020 |
chr1.2 | mRNA | 83389257 | 83391993 | 83389257 | ID=MS.gene065020.t1;Parent=MS.gene065020 |
chr1.2 | exon | 83389257 | 83389360 | 83389257 | ID=MS.gene065020.t1.exon1;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83389257 | 83389360 | 83389257 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83389476 | 83389646 | 83389476 | ID=MS.gene065020.t1.exon2;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83389476 | 83389646 | 83389476 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83389742 | 83389820 | 83389742 | ID=MS.gene065020.t1.exon3;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83389742 | 83389820 | 83389742 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83389939 | 83390010 | 83389939 | ID=MS.gene065020.t1.exon4;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83389939 | 83390010 | 83389939 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83390554 | 83391447 | 83390554 | ID=MS.gene065020.t1.exon5;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83390554 | 83391447 | 83390554 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83391586 | 83391762 | 83391586 | ID=MS.gene065020.t1.exon6;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83391586 | 83391762 | 83391586 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
chr1.2 | exon | 83391898 | 83391993 | 83391898 | ID=MS.gene065020.t1.exon7;Parent=MS.gene065020.t1 |
chr1.2 | CDS | 83391898 | 83391993 | 83391898 | ID=cds.MS.gene065020.t1;Parent=MS.gene065020.t1 |
Gene Sequence |
Protein sequence |