Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065022.t1 | XP_013470325.1 | 87.7 | 324 | 26 | 5 | 1 | 318 | 1 | 316 | 1.80E-145 | 525.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065022.t1 | Q8VZ20 | 41.7 | 321 | 149 | 8 | 16 | 318 | 14 | 314 | 7.0e-53 | 209.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065022.t1 | A0A072VSJ7 | 87.7 | 324 | 26 | 5 | 1 | 318 | 1 | 316 | 1.3e-145 | 525.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene065022.t1 | TF | Trihelix |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065022.t1 | MTR_1g112650 | 87.654 | 324 | 26 | 5 | 1 | 318 | 1 | 316 | 0.0 | 512 |
| MS.gene065022.t1 | MTR_7g020870 | 70.317 | 347 | 68 | 7 | 1 | 318 | 1 | 341 | 6.86e-152 | 429 |
| MS.gene065022.t1 | MTR_7g020870 | 68.400 | 250 | 52 | 5 | 1 | 229 | 1 | 244 | 4.99e-102 | 299 |
| MS.gene065022.t1 | MTR_8g100130 | 34.328 | 335 | 161 | 9 | 32 | 318 | 38 | 361 | 1.29e-47 | 164 |
| MS.gene065022.t1 | MTR_1g094045 | 29.605 | 152 | 67 | 5 | 43 | 154 | 56 | 207 | 3.21e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065022.t1 | AT2G33550 | 45.427 | 328 | 127 | 12 | 16 | 318 | 14 | 314 | 8.21e-75 | 233 |
| MS.gene065022.t1 | AT4G31270 | 31.250 | 112 | 71 | 2 | 43 | 154 | 19 | 124 | 3.28e-13 | 69.3 |
| MS.gene065022.t1 | AT2G35640 | 32.824 | 131 | 71 | 5 | 43 | 160 | 22 | 148 | 1.34e-11 | 65.1 |
Find 90 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTCCGTCATCGGAATT+AGG | 0.129660 | 1.2:-83369810 | None:intergenic |
| CCAACTGTAATCTCTTGTTC+TGG | 0.278506 | 1.2:-83370619 | None:intergenic |
| CAATTCCGTCATCGGAATTA+GGG | 0.284671 | 1.2:-83369809 | None:intergenic |
| TTCATATTTATGATAGTAAT+AGG | 0.301580 | 1.2:+83370303 | MS.gene065022:CDS |
| GTGGACGAGGCAGGAGATTC+TGG | 0.309093 | 1.2:+83369902 | MS.gene065022:CDS |
| TTGCAGTTTGATTCTGTTGC+TGG | 0.313975 | 1.2:-83370646 | None:intergenic |
| TCCGATGACGGAATTGATAA+TGG | 0.339364 | 1.2:+83369816 | MS.gene065022:CDS |
| TCTTTCTCCTTCTAGATTTG+AGG | 0.339729 | 1.2:-83370486 | None:intergenic |
| GGTCGAAACGGTTCCTTGTT+TGG | 0.351084 | 1.2:+83369969 | MS.gene065022:CDS |
| GAATCAAACTGCAAGTAATA+TGG | 0.352089 | 1.2:+83370655 | MS.gene065022:CDS |
| CGCAGATTACAAGAAGATTA+AGG | 0.365457 | 1.2:+83370091 | MS.gene065022:CDS |
| GATTAAGGAGTGGGAGTCTC+AGG | 0.378865 | 1.2:+83370106 | MS.gene065022:CDS |
| GGTTGCTGCAACGGTTGTTC+CGG | 0.389356 | 1.2:+83370235 | MS.gene065022:CDS |
| CACATCTTCGCCATCATTCA+CGG | 0.396485 | 1.2:-83369856 | None:intergenic |
| GATAAGCTTGCAAATGCTCT+TGG | 0.406542 | 1.2:+83370689 | MS.gene065022:CDS |
| CAACTGTAATCTCTTGTTCT+GGG | 0.411973 | 1.2:-83370618 | None:intergenic |
| CTCGAGCATTGCCTTCTCCT+TGG | 0.418681 | 1.2:-83370439 | None:intergenic |
| CGTTTCGACCTGGTTTCAAC+CGG | 0.422688 | 1.2:-83369956 | None:intergenic |
| TGCTTCTCTGAGACTGAGAT+TGG | 0.427099 | 1.2:-83370392 | None:intergenic |
| GTGATGAAAGGGAGTCGTTT+TGG | 0.430091 | 1.2:+83370132 | MS.gene065022:CDS |
| CAACAAGCCTCAAATCTAGA+AGG | 0.443939 | 1.2:+83370479 | MS.gene065022:CDS |
| TCACCAACCACCTCTGAAAC+CGG | 0.447629 | 1.2:-83370272 | None:intergenic |
| CGATTCAGTGTAAGAAGCGA+TGG | 0.458477 | 1.2:+83370057 | MS.gene065022:CDS |
| TCTGAGACTGAGATTGGAAC+AGG | 0.459059 | 1.2:-83370386 | None:intergenic |
| ATAAGCTTGCAAATGCTCTT+GGG | 0.460039 | 1.2:+83370690 | MS.gene065022:CDS |
| TGATTCAGCGGTTGCTGCAA+CGG | 0.463913 | 1.2:+83370226 | MS.gene065022:CDS |
| TCCGGTGGCTGTGGCTGCAC+CGG | 0.467682 | 1.2:+83370253 | MS.gene065022:CDS |
| TCCATTATCAATTCCGTCAT+CGG | 0.473675 | 1.2:-83369817 | None:intergenic |
| TCTTACACTGAATCGGTGTC+CGG | 0.476690 | 1.2:-83370049 | None:intergenic |
| CATCGCTTCTTACACTGAAT+CGG | 0.477582 | 1.2:-83370056 | None:intergenic |
| CCACTCCTCAGTGGCTTCCA+AGG | 0.481478 | 1.2:+83370422 | MS.gene065022:CDS |
| AACGGTTGTTCCGGTGGCTG+TGG | 0.487230 | 1.2:+83370244 | MS.gene065022:CDS |
| CCGTCATCCGCCGTGAATGA+TGG | 0.495613 | 1.2:+83369846 | MS.gene065022:CDS |
| GGCGAAGATGTGAAACCAAC+GGG | 0.499148 | 1.2:+83369867 | MS.gene065022:CDS |
| CACCGTTGTAACCTTCCCGT+TGG | 0.499564 | 1.2:-83369882 | None:intergenic |
| GAGATTCTGGTGCTAGTACA+TGG | 0.500266 | 1.2:+83369915 | MS.gene065022:CDS |
| ACCGGTGCAGCCACAGCCAC+CGG | 0.509504 | 1.2:-83370254 | None:intergenic |
| GTTACAACGGTGGACGAGGC+AGG | 0.511770 | 1.2:+83369893 | MS.gene065022:CDS |
| TTCAGAGGTGGTTGGTGATG+AGG | 0.515224 | 1.2:+83370277 | MS.gene065022:CDS |
| CTTCTCAAACGAACCAAACA+AGG | 0.517996 | 1.2:-83369982 | None:intergenic |
| GTCTCAGGTGAGTGATGAAA+GGG | 0.520228 | 1.2:+83370121 | MS.gene065022:CDS |
| CTCAGTGGCTTCCAAGGAGA+AGG | 0.523796 | 1.2:+83370428 | MS.gene065022:CDS |
| GGTTAGAACGTAACGAGGGT+TGG | 0.525104 | 1.2:-83369788 | None:intergenic |
| ACGTTGAGTTGAGGAGAGAG+AGG | 0.528535 | 1.2:+83370162 | MS.gene065022:CDS |
| GTGAGAAACATGGTGTGAAC+CGG | 0.529962 | 1.2:+83370030 | MS.gene065022:CDS |
| CCATCATTCACGGCGGATGA+CGG | 0.532480 | 1.2:-83369846 | None:intergenic |
| AGAGGTGGTTGGTGATGAGG+AGG | 0.536029 | 1.2:+83370280 | MS.gene065022:CDS |
| AGGAGAGAGAGGAAATTGCC+TGG | 0.537062 | 1.2:+83370173 | MS.gene065022:CDS |
| GCACCGGTTTCAGAGGTGGT+TGG | 0.543134 | 1.2:+83370269 | MS.gene065022:CDS |
| AAGGAGAAAGAAAGAGGAAG+CGG | 0.544131 | 1.2:+83370498 | MS.gene065022:CDS |
| ATCTAGAAGGAGAAAGAAAG+AGG | 0.547355 | 1.2:+83370492 | MS.gene065022:CDS |
| TTGGTTCGTTTGAGAAGAAG+TGG | 0.552340 | 1.2:+83369988 | MS.gene065022:CDS |
| AGTCTCAGGTGAGTGATGAA+AGG | 0.552467 | 1.2:+83370120 | MS.gene065022:CDS |
| TGCTGCAACGGTTGTTCCGG+TGG | 0.553552 | 1.2:+83370238 | MS.gene065022:CDS |
| CGGTTGAAACCAGGTCGAAA+CGG | 0.555133 | 1.2:+83369957 | MS.gene065022:CDS |
| CTTCTCCTTGGAAGCCACTG+AGG | 0.555485 | 1.2:-83370427 | None:intergenic |
| GAAAGAACGATGCTGAAAGC+CGG | 0.556340 | 1.2:+83369937 | MS.gene065022:CDS |
| AACAAGGAACCGTTTCGACC+TGG | 0.557484 | 1.2:-83369966 | None:intergenic |
| TTACAAGAAGATTAAGGAGT+GGG | 0.557499 | 1.2:+83370097 | MS.gene065022:CDS |
| AGGAAGCGGTTTGCAACAGA+AGG | 0.571454 | 1.2:+83370512 | MS.gene065022:CDS |
| GCTGAAAGCCGGTTGAAACC+AGG | 0.575628 | 1.2:+83369948 | MS.gene065022:CDS |
| GATTCAGTGTAAGAAGCGAT+GGG | 0.580190 | 1.2:+83370058 | MS.gene065022:CDS |
| GAAGGTTACAACGGTGGACG+AGG | 0.580650 | 1.2:+83369889 | MS.gene065022:CDS |
| GGCTGCACCGGTTTCAGAGG+TGG | 0.581806 | 1.2:+83370265 | MS.gene065022:CDS |
| CCTTGGAAGCCACTGAGGAG+TGG | 0.583205 | 1.2:-83370422 | None:intergenic |
| TGTGGCTGCACCGGTTTCAG+AGG | 0.592183 | 1.2:+83370262 | MS.gene065022:CDS |
| TTATAATATTCTTGATTCAG+CGG | 0.592839 | 1.2:+83370214 | MS.gene065022:CDS |
| CTTAATCTTCTTGTAATCTG+CGG | 0.598671 | 1.2:-83370090 | None:intergenic |
| CCAGAACAAGAGATTACAGT+TGG | 0.612831 | 1.2:+83370619 | MS.gene065022:CDS |
| GATGCTATGTGAACAGCTAG+AGG | 0.617201 | 1.2:+83370595 | MS.gene065022:CDS |
| CAGTGTGTTCCACTCCTCAG+TGG | 0.621372 | 1.2:+83370413 | MS.gene065022:CDS |
| TCTTCGTACTGTGAGAAACA+TGG | 0.622882 | 1.2:+83370020 | MS.gene065022:CDS |
| AACAGAAGGCAATGAAGAGG+AGG | 0.623007 | 1.2:+83370526 | MS.gene065022:CDS |
| TGGCGAAGATGTGAAACCAA+CGG | 0.623950 | 1.2:+83369866 | MS.gene065022:CDS |
| TCTAACCCTAATTCCGATGA+CGG | 0.628696 | 1.2:+83369804 | MS.gene065022:CDS |
| GTTTGAGAAGAAGTGGACGT+TGG | 0.629824 | 1.2:+83369995 | MS.gene065022:CDS |
| TGCAACAGAAGGCAATGAAG+AGG | 0.638315 | 1.2:+83370523 | MS.gene065022:CDS |
| ATTACAAGAAGATTAAGGAG+TGG | 0.640078 | 1.2:+83370096 | MS.gene065022:CDS |
| CAAGGAGAAGGCAATGCTCG+AGG | 0.643488 | 1.2:+83370440 | MS.gene065022:CDS |
| GATAGTAATAGGAAAGTGAG+TGG | 0.654357 | 1.2:+83370314 | MS.gene065022:CDS |
| TCATTCACGGCGGATGACGG+TGG | 0.658142 | 1.2:-83369843 | None:intergenic |
| GGTTGATGAACGTTGAGTTG+AGG | 0.661503 | 1.2:+83370153 | MS.gene065022:CDS |
| ACCTCCCAATCAAAACAACC+AGG | 0.662249 | 1.2:-83370191 | None:intergenic |
| ATTAGGGTTAGAACGTAACG+AGG | 0.673798 | 1.2:-83369793 | None:intergenic |
| AAGATGTGAAACCAACGGGA+AGG | 0.680756 | 1.2:+83369871 | MS.gene065022:CDS |
| CAACGGGAAGGTTACAACGG+TGG | 0.690383 | 1.2:+83369883 | MS.gene065022:CDS |
| AACCAACGGGAAGGTTACAA+CGG | 0.725397 | 1.2:+83369880 | MS.gene065022:CDS |
| ATTCAGTGTAAGAAGCGATG+GGG | 0.726554 | 1.2:+83370059 | MS.gene065022:CDS |
| TTAGGGTTAGAACGTAACGA+GGG | 0.750121 | 1.2:-83369792 | None:intergenic |
| ATCTTCGCCATCATTCACGG+CGG | 0.776820 | 1.2:-83369853 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATATTTATGATAGTAAT+AGG | + | chr1.2:83370303-83370322 | MS.gene065022:CDS | 15.0% |
| !! | TTATAATATTCTTGATTCAG+CGG | + | chr1.2:83370214-83370233 | MS.gene065022:CDS | 20.0% |
| !! | ATTGAAGTGTTAGAGAAAAA+TGG | + | chr1.2:83370569-83370588 | MS.gene065022:CDS | 25.0% |
| ATTACAAGAAGATTAAGGAG+TGG | + | chr1.2:83370096-83370115 | MS.gene065022:CDS | 30.0% | |
| CTTAATCTTCTTGTAATCTG+CGG | - | chr1.2:83370093-83370112 | None:intergenic | 30.0% | |
| GAATCAAACTGCAAGTAATA+TGG | + | chr1.2:83370655-83370674 | MS.gene065022:CDS | 30.0% | |
| TTACAAGAAGATTAAGGAGT+GGG | + | chr1.2:83370097-83370116 | MS.gene065022:CDS | 30.0% | |
| !! | AGATGAGTTGTTTTCTGATA+CGG | + | chr1.2:83370340-83370359 | MS.gene065022:CDS | 30.0% |
| ATAAGCTTGCAAATGCTCTT+GGG | + | chr1.2:83370690-83370709 | MS.gene065022:CDS | 35.0% | |
| ATCTAGAAGGAGAAAGAAAG+AGG | + | chr1.2:83370492-83370511 | MS.gene065022:CDS | 35.0% | |
| CAACTGTAATCTCTTGTTCT+GGG | - | chr1.2:83370621-83370640 | None:intergenic | 35.0% | |
| CGCAGATTACAAGAAGATTA+AGG | + | chr1.2:83370091-83370110 | MS.gene065022:CDS | 35.0% | |
| GATAGTAATAGGAAAGTGAG+TGG | + | chr1.2:83370314-83370333 | MS.gene065022:CDS | 35.0% | |
| TCCATTATCAATTCCGTCAT+CGG | - | chr1.2:83369820-83369839 | None:intergenic | 35.0% | |
| TCTTTCTCCTTCTAGATTTG+AGG | - | chr1.2:83370489-83370508 | None:intergenic | 35.0% | |
| !!! | AATTGCCTGGTTGTTTTGAT+TGG | + | chr1.2:83370186-83370205 | MS.gene065022:CDS | 35.0% |
| !!! | ATTGCCTGGTTGTTTTGATT+GGG | + | chr1.2:83370187-83370206 | MS.gene065022:CDS | 35.0% |
| AAGGAGAAAGAAAGAGGAAG+CGG | + | chr1.2:83370498-83370517 | MS.gene065022:CDS | 40.0% | |
| ATTAGGGTTAGAACGTAACG+AGG | - | chr1.2:83369796-83369815 | None:intergenic | 40.0% | |
| ATTCAGTGTAAGAAGCGATG+GGG | + | chr1.2:83370059-83370078 | MS.gene065022:CDS | 40.0% | |
| CAACAAGCCTCAAATCTAGA+AGG | + | chr1.2:83370479-83370498 | MS.gene065022:CDS | 40.0% | |
| CAATTCCGTCATCGGAATTA+GGG | - | chr1.2:83369812-83369831 | None:intergenic | 40.0% | |
| CATCGCTTCTTACACTGAAT+CGG | - | chr1.2:83370059-83370078 | None:intergenic | 40.0% | |
| CCAACTGTAATCTCTTGTTC+TGG | - | chr1.2:83370622-83370641 | None:intergenic | 40.0% | |
| CCAGAACAAGAGATTACAGT+TGG | + | chr1.2:83370619-83370638 | MS.gene065022:CDS | 40.0% | |
| CTTCTCAAACGAACCAAACA+AGG | - | chr1.2:83369985-83370004 | None:intergenic | 40.0% | |
| GATAAGCTTGCAAATGCTCT+TGG | + | chr1.2:83370689-83370708 | MS.gene065022:CDS | 40.0% | |
| GATTCAGTGTAAGAAGCGAT+GGG | + | chr1.2:83370058-83370077 | MS.gene065022:CDS | 40.0% | |
| TCAATTCCGTCATCGGAATT+AGG | - | chr1.2:83369813-83369832 | None:intergenic | 40.0% | |
| TCTAACCCTAATTCCGATGA+CGG | + | chr1.2:83369804-83369823 | MS.gene065022:CDS | 40.0% | |
| TCTTCGTACTGTGAGAAACA+TGG | + | chr1.2:83370020-83370039 | MS.gene065022:CDS | 40.0% | |
| TTAGGGTTAGAACGTAACGA+GGG | - | chr1.2:83369795-83369814 | None:intergenic | 40.0% | |
| TTGCAGTTTGATTCTGTTGC+TGG | - | chr1.2:83370649-83370668 | None:intergenic | 40.0% | |
| ! | TTGGTTCGTTTGAGAAGAAG+TGG | + | chr1.2:83369988-83370007 | MS.gene065022:CDS | 40.0% |
| !! | GTTGTTTTCTGATACGGAGA+AGG | + | chr1.2:83370346-83370365 | MS.gene065022:CDS | 40.0% |
| !! | TCCGATGACGGAATTGATAA+TGG | + | chr1.2:83369816-83369835 | MS.gene065022:CDS | 40.0% |
| AACAGAAGGCAATGAAGAGG+AGG | + | chr1.2:83370526-83370545 | MS.gene065022:CDS | 45.0% | |
| AACCAACGGGAAGGTTACAA+CGG | + | chr1.2:83369880-83369899 | MS.gene065022:CDS | 45.0% | |
| AAGATGTGAAACCAACGGGA+AGG | + | chr1.2:83369871-83369890 | MS.gene065022:CDS | 45.0% | |
| ACCTCCCAATCAAAACAACC+AGG | - | chr1.2:83370194-83370213 | None:intergenic | 45.0% | |
| AGTCTCAGGTGAGTGATGAA+AGG | + | chr1.2:83370120-83370139 | MS.gene065022:CDS | 45.0% | |
| CACATCTTCGCCATCATTCA+CGG | - | chr1.2:83369859-83369878 | None:intergenic | 45.0% | |
| CGATTCAGTGTAAGAAGCGA+TGG | + | chr1.2:83370057-83370076 | MS.gene065022:CDS | 45.0% | |
| GAAAGAACGATGCTGAAAGC+CGG | + | chr1.2:83369937-83369956 | MS.gene065022:CDS | 45.0% | |
| GATGCTATGTGAACAGCTAG+AGG | + | chr1.2:83370595-83370614 | MS.gene065022:CDS | 45.0% | |
| GTCTCAGGTGAGTGATGAAA+GGG | + | chr1.2:83370121-83370140 | MS.gene065022:CDS | 45.0% | |
| GTGAGAAACATGGTGTGAAC+CGG | + | chr1.2:83370030-83370049 | MS.gene065022:CDS | 45.0% | |
| GTTTGAGAAGAAGTGGACGT+TGG | + | chr1.2:83369995-83370014 | MS.gene065022:CDS | 45.0% | |
| TGCAACAGAAGGCAATGAAG+AGG | + | chr1.2:83370523-83370542 | MS.gene065022:CDS | 45.0% | |
| TGGCGAAGATGTGAAACCAA+CGG | + | chr1.2:83369866-83369885 | MS.gene065022:CDS | 45.0% | |
| ! | GAGATTCTGGTGCTAGTACA+TGG | + | chr1.2:83369915-83369934 | MS.gene065022:CDS | 45.0% |
| ! | GTGATGAAAGGGAGTCGTTT+TGG | + | chr1.2:83370132-83370151 | MS.gene065022:CDS | 45.0% |
| ! | TCTGAGACTGAGATTGGAAC+AGG | - | chr1.2:83370389-83370408 | None:intergenic | 45.0% |
| ! | TCTTACACTGAATCGGTGTC+CGG | - | chr1.2:83370052-83370071 | None:intergenic | 45.0% |
| !! | GGTTGATGAACGTTGAGTTG+AGG | + | chr1.2:83370153-83370172 | MS.gene065022:CDS | 45.0% |
| !! | TGCTTCTCTGAGACTGAGAT+TGG | - | chr1.2:83370395-83370414 | None:intergenic | 45.0% |
| AACAAGGAACCGTTTCGACC+TGG | - | chr1.2:83369969-83369988 | None:intergenic | 50.0% | |
| AGGAAGCGGTTTGCAACAGA+AGG | + | chr1.2:83370512-83370531 | MS.gene065022:CDS | 50.0% | |
| AGGAGAGAGAGGAAATTGCC+TGG | + | chr1.2:83370173-83370192 | MS.gene065022:CDS | 50.0% | |
| ATCTTCGCCATCATTCACGG+CGG | - | chr1.2:83369856-83369875 | None:intergenic | 50.0% | |
| CGGTTGAAACCAGGTCGAAA+CGG | + | chr1.2:83369957-83369976 | MS.gene065022:CDS | 50.0% | |
| CGTTTCGACCTGGTTTCAAC+CGG | - | chr1.2:83369959-83369978 | None:intergenic | 50.0% | |
| GATTAAGGAGTGGGAGTCTC+AGG | + | chr1.2:83370106-83370125 | MS.gene065022:CDS | 50.0% | |
| GGCGAAGATGTGAAACCAAC+GGG | + | chr1.2:83369867-83369886 | MS.gene065022:CDS | 50.0% | |
| GGTCGAAACGGTTCCTTGTT+TGG | + | chr1.2:83369969-83369988 | MS.gene065022:CDS | 50.0% | |
| GGTTAGAACGTAACGAGGGT+TGG | - | chr1.2:83369791-83369810 | None:intergenic | 50.0% | |
| TGATTCAGCGGTTGCTGCAA+CGG | + | chr1.2:83370226-83370245 | MS.gene065022:CDS | 50.0% | |
| !! | ACGTTGAGTTGAGGAGAGAG+AGG | + | chr1.2:83370162-83370181 | MS.gene065022:CDS | 50.0% |
| !! | TCACCAACCACCTCTGAAAC+CGG | - | chr1.2:83370275-83370294 | None:intergenic | 50.0% |
| !! | TTCAGAGGTGGTTGGTGATG+AGG | + | chr1.2:83370277-83370296 | MS.gene065022:CDS | 50.0% |
| !!! | GCCTGGTTGTTTTGATTGGG+AGG | + | chr1.2:83370190-83370209 | MS.gene065022:CDS | 50.0% |
| CAACGGGAAGGTTACAACGG+TGG | + | chr1.2:83369883-83369902 | MS.gene065022:CDS | 55.0% | |
| CAAGGAGAAGGCAATGCTCG+AGG | + | chr1.2:83370440-83370459 | MS.gene065022:CDS | 55.0% | |
| CACCGTTGTAACCTTCCCGT+TGG | - | chr1.2:83369885-83369904 | None:intergenic | 55.0% | |
| CAGTGTGTTCCACTCCTCAG+TGG | + | chr1.2:83370413-83370432 | MS.gene065022:CDS | 55.0% | |
| CCATCATTCACGGCGGATGA+CGG | - | chr1.2:83369849-83369868 | None:intergenic | 55.0% | |
| CTCAGTGGCTTCCAAGGAGA+AGG | + | chr1.2:83370428-83370447 | MS.gene065022:CDS | 55.0% | |
| CTTCTCCTTGGAAGCCACTG+AGG | - | chr1.2:83370430-83370449 | None:intergenic | 55.0% | |
| GAAGGTTACAACGGTGGACG+AGG | + | chr1.2:83369889-83369908 | MS.gene065022:CDS | 55.0% | |
| GCTGAAAGCCGGTTGAAACC+AGG | + | chr1.2:83369948-83369967 | MS.gene065022:CDS | 55.0% | |
| GGTTGCTGCAACGGTTGTTC+CGG | + | chr1.2:83370235-83370254 | MS.gene065022:CDS | 55.0% | |
| ! | CTCGAGCATTGCCTTCTCCT+TGG | - | chr1.2:83370442-83370461 | None:intergenic | 55.0% |
| !! | AGAGGTGGTTGGTGATGAGG+AGG | + | chr1.2:83370280-83370299 | MS.gene065022:CDS | 55.0% |
| AACGGTTGTTCCGGTGGCTG+TGG | + | chr1.2:83370244-83370263 | MS.gene065022:CDS | 60.0% | |
| CCACTCCTCAGTGGCTTCCA+AGG | + | chr1.2:83370422-83370441 | MS.gene065022:CDS | 60.0% | |
| CCGTCATCCGCCGTGAATGA+TGG | + | chr1.2:83369846-83369865 | MS.gene065022:CDS | 60.0% | |
| CCTTGGAAGCCACTGAGGAG+TGG | - | chr1.2:83370425-83370444 | None:intergenic | 60.0% | |
| GTGGACGAGGCAGGAGATTC+TGG | + | chr1.2:83369902-83369921 | MS.gene065022:CDS | 60.0% | |
| GTTACAACGGTGGACGAGGC+AGG | + | chr1.2:83369893-83369912 | MS.gene065022:CDS | 60.0% | |
| TGCTGCAACGGTTGTTCCGG+TGG | + | chr1.2:83370238-83370257 | MS.gene065022:CDS | 60.0% | |
| ! | TCATTCACGGCGGATGACGG+TGG | - | chr1.2:83369846-83369865 | None:intergenic | 60.0% |
| !! | GCACCGGTTTCAGAGGTGGT+TGG | + | chr1.2:83370269-83370288 | MS.gene065022:CDS | 60.0% |
| !! | TGTGGCTGCACCGGTTTCAG+AGG | + | chr1.2:83370262-83370281 | MS.gene065022:CDS | 60.0% |
| !! | GGCTGCACCGGTTTCAGAGG+TGG | + | chr1.2:83370265-83370284 | MS.gene065022:CDS | 65.0% |
| ACCGGTGCAGCCACAGCCAC+CGG | - | chr1.2:83370257-83370276 | None:intergenic | 70.0% | |
| TCCGGTGGCTGTGGCTGCAC+CGG | + | chr1.2:83370253-83370272 | MS.gene065022:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 83369777 | 83370733 | 83369777 | ID=MS.gene065022 |
| chr1.2 | mRNA | 83369777 | 83370733 | 83369777 | ID=MS.gene065022.t1;Parent=MS.gene065022 |
| chr1.2 | exon | 83369777 | 83370733 | 83369777 | ID=MS.gene065022.t1.exon1;Parent=MS.gene065022.t1 |
| chr1.2 | CDS | 83369777 | 83370733 | 83369777 | ID=cds.MS.gene065022.t1;Parent=MS.gene065022.t1 |
| Gene Sequence |
| Protein sequence |
