AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene065197

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065197.t1 MTR_8g067635 55.039 387 131 6 1 375 166 521 6.17e-123 366
MS.gene065197.t1 MTR_8g067650 53.980 402 131 8 1 389 159 519 1.55e-106 323
MS.gene065197.t1 MTR_2g024380 39.387 424 198 7 1 389 70 469 7.13e-87 271
MS.gene065197.t1 MTR_6g053200 44.164 317 162 5 74 389 233 535 9.57e-76 244
MS.gene065197.t1 MTR_2g024350 48.879 223 111 2 170 389 4 226 5.47e-65 207
MS.gene065197.t1 MTR_8g069935 48.617 253 114 3 1 241 150 398 1.30e-53 184
MS.gene065197.t1 MTR_8g069935 64.444 45 16 0 345 389 418 462 8.15e-11 63.9
MS.gene065197.t1 MTR_7g104980 46.703 182 95 1 195 374 18 199 7.90e-50 167
MS.gene065197.t1 MTR_1g099600 55.000 100 43 2 151 250 163 260 7.89e-29 114
MS.gene065197.t1 MTR_8g028565 50.943 106 49 2 164 267 145 249 6.32e-25 104
MS.gene065197.t1 MTR_7g105000 39.806 206 101 3 1 194 146 340 1.45e-24 103
MS.gene065197.t1 MTR_7g079040 46.094 128 52 3 119 246 115 225 1.61e-23 100
MS.gene065197.t1 MTR_8g098945 58.228 79 32 1 168 246 123 200 1.23e-22 96.7
MS.gene065197.t1 MTR_2g032030 48.864 88 44 1 169 256 262 348 1.81e-19 90.1
MS.gene065197.t1 MTR_4g094908 58.333 72 29 1 175 245 267 338 2.80e-19 88.6
MS.gene065197.t1 MTR_2g032030 48.864 88 44 1 169 256 262 348 4.67e-19 89.0
MS.gene065197.t1 MTR_7g080020 48.352 91 45 2 164 254 270 358 9.59e-19 88.6
MS.gene065197.t1 MTR_7g080020 47.297 74 38 1 172 245 491 563 1.47e-14 75.9
MS.gene065197.t1 MTR_2g083870 63.333 60 22 0 175 234 81 140 2.10e-18 84.7
MS.gene065197.t1 MTR_7g080000 47.253 91 46 2 164 254 224 312 2.16e-18 87.4
MS.gene065197.t1 MTR_7g080000 51.562 64 30 1 172 235 430 492 9.97e-14 73.2
MS.gene065197.t1 MTR_2g016770 46.739 92 47 1 151 240 4 95 2.44e-18 83.2
MS.gene065197.t1 MTR_2g016770 46.739 92 47 1 151 240 12 103 2.90e-18 83.2
MS.gene065197.t1 MTR_1g070455 62.121 66 21 1 175 236 294 359 3.31e-18 85.5
MS.gene065197.t1 MTR_5g016610 55.556 72 31 1 160 231 186 256 3.38e-18 84.3
MS.gene065197.t1 MTR_3g108960 51.190 84 36 2 154 233 291 373 3.46e-18 85.9
MS.gene065197.t1 MTR_3g009470 32.780 241 136 11 27 245 113 349 3.46e-18 87.0
MS.gene065197.t1 MTR_3g009470 45.205 73 39 1 172 244 493 564 7.16e-14 73.6
MS.gene065197.t1 MTR_3g009470 33.058 242 134 12 27 245 113 349 6.03e-18 85.9
MS.gene065197.t1 MTR_7g011820 45.745 94 44 3 170 258 224 315 1.22e-17 85.1
MS.gene065197.t1 MTR_7g011820 46.988 83 42 2 174 256 410 490 2.13e-15 78.2
MS.gene065197.t1 MTR_8g087000 56.452 62 27 0 175 236 78 139 2.64e-17 81.3
MS.gene065197.t1 MTR_8g087000 56.452 62 27 0 175 236 77 138 3.01e-17 80.9
MS.gene065197.t1 MTR_4g127040 49.398 83 41 1 149 231 221 302 6.21e-17 81.3
MS.gene065197.t1 MTR_1g009613 48.193 83 42 1 149 231 238 319 1.05e-16 80.9
MS.gene065197.t1 MTR_7g100510 48.315 89 43 3 158 245 173 259 1.64e-16 81.3
MS.gene065197.t1 MTR_7g100510 40.196 102 44 3 151 237 324 423 3.47e-14 73.9
MS.gene065197.t1 MTR_7g109600 49.296 71 36 0 164 234 43 113 2.29e-16 79.0
MS.gene065197.t1 MTR_5g097490 56.522 69 26 3 170 237 88 153 2.66e-16 80.1
MS.gene065197.t1 MTR_5g097490 50.000 60 29 1 175 234 253 311 6.24e-12 67.0
MS.gene065197.t1 MTR_0117s0040 49.351 77 38 1 160 236 61 136 4.66e-16 77.4
MS.gene065197.t1 MTR_4g130900 42.697 89 38 2 146 234 343 418 6.13e-16 79.7
MS.gene065197.t1 MTR_7g071120 53.425 73 32 2 166 238 158 228 7.94e-16 79.3
MS.gene065197.t1 MTR_7g071120 44.304 79 35 2 174 244 324 401 4.54e-12 67.8
MS.gene065197.t1 MTR_3g031220 47.423 97 37 5 151 240 174 263 4.92e-15 76.3
MS.gene065197.t1 MTR_3g031220 47.423 97 37 5 151 240 174 263 6.56e-15 76.6
MS.gene065197.t1 MTR_3g031220 46.875 64 33 1 172 235 363 425 1.14e-11 66.6
MS.gene065197.t1 MTR_4g082580 50.746 67 32 1 174 240 278 343 1.10e-14 75.5
MS.gene065197.t1 MTR_4g082580 47.143 70 36 1 165 234 136 204 6.93e-14 72.8
MS.gene065197.t1 MTR_3g056100 45.161 93 43 3 152 238 215 305 2.10e-14 75.1
MS.gene065197.t1 MTR_3g056100 46.269 67 35 1 174 240 402 467 3.31e-13 71.6
MS.gene065197.t1 MTR_3g056100 45.161 93 43 3 152 238 215 305 2.51e-14 75.1
MS.gene065197.t1 MTR_3g056100 46.269 67 35 1 174 240 415 480 3.74e-13 71.2
MS.gene065197.t1 MTR_3g056100 45.161 93 43 3 152 238 71 161 5.12e-14 73.6
MS.gene065197.t1 MTR_3g056100 46.269 67 35 1 174 240 258 323 5.72e-13 70.5
MS.gene065197.t1 MTR_3g056100 45.161 93 43 3 152 238 71 161 5.88e-14 73.6
MS.gene065197.t1 MTR_3g056100 46.269 67 35 1 174 240 271 336 6.55e-13 70.1
MS.gene065197.t1 MTR_5g042920 49.254 67 33 1 174 240 320 385 8.52e-14 72.8
MS.gene065197.t1 MTR_5g042920 47.368 76 38 2 165 240 142 215 5.74e-13 70.5
MS.gene065197.t1 MTR_7g079010 36.667 90 54 2 144 231 109 197 1.27e-13 70.1
MS.gene065197.t1 MTR_5g091390 48.485 66 33 1 174 239 157 221 1.52e-13 71.2
MS.gene065197.t1 MTR_5g067680 44.681 94 43 4 143 229 168 259 1.68e-13 71.6
MS.gene065197.t1 MTR_2g033820 47.692 65 33 1 174 238 203 266 1.74e-13 71.6
MS.gene065197.t1 MTR_3g093830 41.489 94 46 3 138 229 98 184 2.20e-13 70.9
MS.gene065197.t1 MTR_5g094430 48.387 62 31 1 174 235 364 424 3.32e-13 71.2
MS.gene065197.t1 MTR_5g094430 28.512 242 130 11 19 234 34 258 2.47e-12 68.6
MS.gene065197.t1 MTR_7g062220 44.737 76 41 1 156 231 106 180 4.01e-13 70.1
MS.gene065197.t1 MTR_7g109800 41.667 84 48 1 174 257 145 227 4.12e-13 69.7
MS.gene065197.t1 MTR_8g099350 40.230 87 46 2 149 229 103 189 4.26e-13 70.5
MS.gene065197.t1 MTR_4g013260 48.438 64 32 1 171 234 181 243 5.16e-13 70.9
MS.gene065197.t1 MTR_4g013260 47.619 63 32 1 172 234 334 395 5.12e-12 67.8
MS.gene065197.t1 MTR_5g094430 48.387 62 31 1 174 235 252 312 6.12e-13 70.1
MS.gene065197.t1 MTR_5g094430 51.613 62 28 2 173 234 87 146 1.11e-11 66.2
MS.gene065197.t1 MTR_2g045360 46.667 60 32 0 175 234 212 271 6.61e-13 70.1
MS.gene065197.t1 MTR_5g074400 51.562 64 29 2 171 234 240 301 6.70e-13 70.5
MS.gene065197.t1 MTR_5g074400 48.438 64 32 1 172 235 418 480 1.65e-12 69.3
MS.gene065197.t1 MTR_5g094430 48.387 62 31 1 174 235 230 290 6.94e-13 70.1
MS.gene065197.t1 MTR_5g094430 51.613 62 28 2 173 234 65 124 1.29e-11 66.2
MS.gene065197.t1 MTR_8g027860 40.404 99 49 3 141 229 95 193 8.67e-13 69.3
MS.gene065197.t1 MTR_4g094588 44.928 69 37 1 174 242 178 245 1.15e-12 68.9
MS.gene065197.t1 MTR_3g053330 41.333 75 43 1 160 234 238 311 1.29e-12 69.3
MS.gene065197.t1 MTR_8g007270 44.928 69 36 2 172 240 152 218 1.75e-12 67.0
MS.gene065197.t1 MTR_3g090860 46.552 58 29 1 174 229 133 190 2.22e-12 68.2
MS.gene065197.t1 MTR_1g086790 37.079 89 54 2 154 242 139 225 2.69e-12 67.8
MS.gene065197.t1 MTR_5g043880 33.036 112 73 2 141 252 92 201 5.75e-12 66.2
MS.gene065197.t1 MTR_3g095040 44.776 67 34 3 171 236 115 179 7.75e-12 64.7
MS.gene065197.t1 MTR_2g105060 40.278 72 38 1 172 238 92 163 8.29e-12 65.1
MS.gene065197.t1 MTR_7g110720 32.432 148 79 5 107 234 103 249 9.45e-12 66.6
MS.gene065197.t1 MTR_2g105060 40.278 72 38 1 172 238 167 238 1.21e-11 65.5
MS.gene065197.t1 MTR_8g092140 42.424 66 36 2 172 237 158 221 1.52e-11 64.3
MS.gene065197.t1 MTR_7g110720 45.000 60 33 0 175 234 217 276 1.59e-11 65.9
MS.gene065197.t1 MTR_3g095080 43.077 65 35 2 172 236 166 228 2.01e-11 63.9
MS.gene065197.t1 MTR_2g075610 47.458 59 29 1 174 230 29 87 2.42e-11 62.8
MS.gene065197.t1 MTR_8g092010 30.827 133 80 6 112 234 37 167 2.44e-11 62.8
MS.gene065197.t1 MTR_5g067700 50.000 60 28 1 175 232 107 166 2.52e-11 63.5
MS.gene065197.t1 MTR_2g023930 41.667 72 41 1 160 231 292 362 2.53e-11 65.5
MS.gene065197.t1 MTR_7g009730 47.368 57 30 0 175 231 220 276 2.70e-11 65.5
MS.gene065197.t1 MTR_7g028415 35.802 81 49 2 172 250 91 170 2.74e-11 62.4
MS.gene065197.t1 MTR_7g028710 35.802 81 49 2 172 250 91 170 2.74e-11 62.4
MS.gene065197.t1 MTR_1g013790 41.270 63 37 0 172 234 99 161 2.76e-11 63.9
MS.gene065197.t1 MTR_3g095080 43.077 65 35 2 172 236 142 204 2.77e-11 63.2
MS.gene065197.t1 MTR_4g052030 50.909 55 15 1 177 231 8 50 3.33e-11 58.5
MS.gene065197.t1 MTR_6g086555 44.928 69 35 3 167 234 200 266 3.50e-11 64.7
MS.gene065197.t1 MTR_4g049790 45.902 61 33 0 175 235 313 373 4.54e-11 64.7
MS.gene065197.t1 MTR_4g107970 45.000 60 33 0 175 234 179 238 5.78e-11 64.3
MS.gene065197.t1 MTR_4g122530 42.623 61 34 1 174 234 208 267 6.39e-11 63.9
MS.gene065197.t1 MTR_4g007060 41.270 63 37 0 172 234 126 188 7.38e-11 62.8
MS.gene065197.t1 MTR_4g007060 41.270 63 37 0 172 234 160 222 8.24e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene065197.t1 AT4G01250 36.000 200 108 5 48 246 19 199 1.04e-24 103
MS.gene065197.t1 AT5G52830 52.525 99 45 2 151 249 143 239 2.99e-24 102
MS.gene065197.t1 AT4G23550 51.685 89 42 1 158 246 124 211 5.24e-23 98.6
MS.gene065197.t1 AT5G45050 51.282 78 38 0 154 231 1021 1098 6.38e-20 92.4
MS.gene065197.t1 AT5G45050 51.282 78 38 0 154 231 1160 1237 7.39e-20 92.4
MS.gene065197.t1 AT5G45050 51.282 78 38 0 154 231 1132 1209 8.28e-20 92.4
MS.gene065197.t1 AT4G24240 45.763 118 57 3 118 231 224 338 6.22e-19 87.8
MS.gene065197.t1 AT1G29280 61.667 60 23 0 175 234 75 134 8.17e-19 85.9
MS.gene065197.t1 AT4G31550 46.809 94 47 1 149 239 217 310 2.09e-18 85.9
MS.gene065197.t1 AT4G31550 48.352 91 46 1 149 239 222 311 3.07e-18 85.1
MS.gene065197.t1 AT2G23320 62.069 58 22 0 175 232 241 298 4.47e-18 84.7
MS.gene065197.t1 AT2G34830 48.780 82 41 1 161 242 202 282 4.63e-18 85.9
MS.gene065197.t1 AT2G34830 48.780 82 41 1 161 242 211 291 5.17e-18 85.9
MS.gene065197.t1 AT3G04670 62.712 59 22 0 175 233 263 321 7.59e-18 84.3
MS.gene065197.t1 AT3G58710 56.061 66 29 0 175 240 72 137 8.44e-18 83.2
MS.gene065197.t1 AT3G58710 56.061 66 29 0 175 240 71 136 9.07e-18 83.2
MS.gene065197.t1 AT5G28650 61.017 59 23 0 175 233 263 321 1.84e-17 83.2
MS.gene065197.t1 AT2G24570 47.826 92 47 1 142 233 212 302 2.01e-17 82.8
MS.gene065197.t1 AT1G30650 48.780 82 41 1 161 242 204 284 2.99e-17 83.6
MS.gene065197.t1 AT3G01080 49.296 71 34 2 170 240 201 269 5.54e-17 81.6
MS.gene065197.t1 AT3G01080 49.296 71 34 2 170 240 201 269 2.23e-16 80.9
MS.gene065197.t1 AT3G01080 50.820 61 29 1 174 234 344 403 7.66e-14 73.2
MS.gene065197.t1 AT3G01080 49.296 71 34 2 170 240 163 231 2.92e-16 80.5
MS.gene065197.t1 AT3G01080 50.820 61 29 1 174 234 306 365 1.02e-13 72.8
MS.gene065197.t1 AT2G30590 49.398 83 39 1 154 233 290 372 8.27e-16 78.6
MS.gene065197.t1 AT2G37260 45.349 86 41 3 151 232 323 406 1.11e-15 78.6
MS.gene065197.t1 AT2G37260 40.385 104 49 4 132 235 134 224 5.97e-14 73.6
MS.gene065197.t1 AT2G37260 45.349 86 41 3 151 232 243 326 1.55e-15 77.8
MS.gene065197.t1 AT2G37260 40.385 104 49 4 132 235 54 144 9.36e-14 72.4
MS.gene065197.t1 AT2G37260 45.349 86 41 3 151 232 241 324 1.55e-15 77.8
MS.gene065197.t1 AT2G37260 40.385 104 49 4 132 235 52 142 9.41e-14 72.4
MS.gene065197.t1 AT1G13960 47.368 76 38 2 170 245 225 298 2.57e-15 77.8
MS.gene065197.t1 AT1G13960 49.180 61 30 1 174 234 409 468 3.96e-13 71.2
MS.gene065197.t1 AT4G26440 49.315 73 35 2 173 245 177 247 2.79e-15 77.8
MS.gene065197.t1 AT4G26440 30.000 180 97 6 172 334 370 537 1.31e-13 72.8
MS.gene065197.t1 AT2G03340 49.367 79 35 3 169 244 245 321 4.58e-15 77.0
MS.gene065197.t1 AT2G03340 51.613 62 29 1 174 235 415 475 2.12e-14 75.1
MS.gene065197.t1 AT1G13960 47.368 76 38 2 170 245 72 145 4.65e-15 76.3
MS.gene065197.t1 AT1G13960 49.180 61 30 1 174 234 256 315 7.86e-13 69.7
MS.gene065197.t1 AT5G56270 52.941 68 30 2 173 240 272 337 5.47e-15 77.0
MS.gene065197.t1 AT5G56270 48.438 64 32 1 172 235 485 547 3.57e-13 71.6
MS.gene065197.t1 AT2G38470 46.316 95 48 3 164 257 173 265 2.81e-14 74.7
MS.gene065197.t1 AT2G38470 50.000 62 30 1 174 235 362 422 2.17e-12 68.9
MS.gene065197.t1 AT5G45260 45.946 74 37 2 175 246 1209 1281 4.25e-14 74.7
MS.gene065197.t1 AT5G41570 40.000 85 48 2 149 231 71 154 5.51e-14 70.1
MS.gene065197.t1 AT5G07100 44.595 74 40 1 167 240 110 182 5.56e-14 72.4
MS.gene065197.t1 AT5G07100 42.254 71 40 1 172 242 232 301 1.13e-12 68.6
MS.gene065197.t1 AT1G64000 46.774 62 32 1 170 231 110 170 7.08e-14 70.1
MS.gene065197.t1 AT1G66550 54.386 57 24 1 175 229 104 160 9.38e-14 70.9
MS.gene065197.t1 AT4G30935 43.056 72 40 1 163 234 320 390 1.01e-13 72.8
MS.gene065197.t1 AT1G66550 54.386 57 24 1 175 229 109 165 1.07e-13 70.9
MS.gene065197.t1 AT5G07100 45.833 72 38 1 169 240 19 89 1.19e-13 70.1
MS.gene065197.t1 AT5G07100 42.254 71 40 1 172 242 139 208 3.45e-12 65.9
MS.gene065197.t1 AT5G07100 45.833 72 38 1 169 240 19 89 1.19e-13 70.1
MS.gene065197.t1 AT5G07100 42.254 71 40 1 172 242 139 208 3.45e-12 65.9
MS.gene065197.t1 AT5G07100 45.833 72 38 1 169 240 19 89 1.19e-13 70.1
MS.gene065197.t1 AT5G07100 42.254 71 40 1 172 242 139 208 3.45e-12 65.9
MS.gene065197.t1 AT5G07100 45.833 72 38 1 169 240 19 89 1.19e-13 70.1
MS.gene065197.t1 AT5G07100 42.254 71 40 1 172 242 139 208 3.45e-12 65.9
MS.gene065197.t1 AT2G47260 41.176 85 48 2 154 238 155 237 2.56e-13 70.9
MS.gene065197.t1 AT5G43290 50.794 63 30 1 169 231 109 170 4.26e-13 69.3
MS.gene065197.t1 AT2G46130 46.667 60 31 1 172 231 28 86 5.37e-13 65.5
MS.gene065197.t1 AT5G22570 53.226 62 27 1 170 229 106 167 9.41e-13 68.6
MS.gene065197.t1 AT1G69310 37.755 98 59 2 145 242 119 214 1.19e-12 68.2
MS.gene065197.t1 AT1G69310 37.755 98 59 2 145 242 119 214 1.19e-12 68.2
MS.gene065197.t1 AT1G69310 37.755 98 59 2 145 242 119 214 1.19e-12 68.2
MS.gene065197.t1 AT2G46400 39.604 101 55 3 138 232 64 164 1.19e-12 68.6
MS.gene065197.t1 AT2G30250 48.485 66 33 1 175 240 329 393 1.19e-12 69.3
MS.gene065197.t1 AT2G30250 45.455 77 39 3 158 234 151 224 1.26e-12 69.3
MS.gene065197.t1 AT2G21900 48.387 62 31 1 174 235 109 169 1.74e-12 66.2
MS.gene065197.t1 AT4G18170 40.698 86 49 2 154 239 153 236 2.89e-12 67.4
MS.gene065197.t1 AT5G46350 36.607 112 63 4 160 265 170 279 3.17e-12 67.4
MS.gene065197.t1 AT2G44745 46.667 60 31 1 172 231 143 201 3.40e-12 65.9
MS.gene065197.t1 AT2G04880 40.000 100 54 4 170 269 107 200 3.42e-12 68.2
MS.gene065197.t1 AT2G04880 45.205 73 36 2 175 244 308 379 3.42e-12 68.2
MS.gene065197.t1 AT2G04880 45.205 73 36 2 175 244 284 355 3.86e-12 67.8
MS.gene065197.t1 AT2G04880 47.692 65 32 2 170 234 107 169 4.42e-12 67.8
MS.gene065197.t1 AT5G49520 44.118 68 37 1 174 241 221 287 4.10e-12 67.8
MS.gene065197.t1 AT4G26640 37.864 103 61 3 172 273 169 269 6.11e-12 67.4
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 339 414 8.66e-12 67.0
MS.gene065197.t1 AT4G39410 40.506 79 45 2 172 250 221 297 6.33e-12 66.2
MS.gene065197.t1 AT4G23810 44.828 87 40 4 150 229 130 215 6.77e-12 66.6
MS.gene065197.t1 AT3G01970 41.096 73 40 2 172 242 63 134 6.82e-12 63.5
MS.gene065197.t1 AT4G26640 37.864 103 61 3 172 273 209 309 7.01e-12 67.4
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 379 454 9.41e-12 67.0
MS.gene065197.t1 AT1G55600 48.333 60 30 1 175 234 308 366 7.29e-12 67.0
MS.gene065197.t1 AT4G26640 37.864 103 61 3 172 273 137 237 7.77e-12 67.0
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 307 382 1.09e-11 66.6
MS.gene065197.t1 AT1G66560 50.000 58 27 1 174 229 103 160 8.41e-12 65.5
MS.gene065197.t1 AT5G64810 47.761 67 30 3 172 236 108 171 9.54e-12 63.9
MS.gene065197.t1 AT1G80590 49.206 63 30 1 175 235 86 148 1.07e-11 64.7
MS.gene065197.t1 AT4G26640 39.423 104 58 5 172 273 33 133 1.30e-11 65.9
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 203 278 1.41e-11 65.9
MS.gene065197.t1 AT4G26640 39.423 104 58 5 172 273 33 133 1.30e-11 65.9
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 203 278 1.41e-11 65.9
MS.gene065197.t1 AT4G26640 39.423 104 58 5 172 273 33 133 1.30e-11 65.9
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 203 278 1.41e-11 65.9
MS.gene065197.t1 AT4G26640 39.423 104 58 5 172 273 33 133 1.30e-11 65.9
MS.gene065197.t1 AT4G26640 39.506 81 44 2 172 252 203 278 1.41e-11 65.9
MS.gene065197.t1 AT2G25000 36.145 83 48 1 157 234 81 163 1.31e-11 64.3
MS.gene065197.t1 AT2G25000 36.145 83 48 1 157 234 81 163 1.31e-11 64.3
MS.gene065197.t1 AT5G26170 47.541 61 31 1 171 231 110 169 1.33e-11 63.2
MS.gene065197.t1 AT5G01900 50.000 60 28 1 172 229 108 167 1.45e-11 64.7
MS.gene065197.t1 AT2G25000 36.145 83 48 1 157 234 103 185 1.45e-11 64.7
MS.gene065197.t1 AT1G29860 43.478 69 38 1 174 242 136 203 1.49e-11 65.1
MS.gene065197.t1 AT4G11070 42.105 95 47 4 142 229 73 166 1.54e-11 65.1
MS.gene065197.t1 AT2G40740 39.080 87 48 2 148 229 144 230 1.77e-11 65.1
MS.gene065197.t1 AT4G11070 42.105 95 47 4 142 229 105 198 1.83e-11 65.1
MS.gene065197.t1 AT2G40740 39.080 87 48 2 148 229 153 239 1.89e-11 65.1
MS.gene065197.t1 AT4G22070 41.667 72 41 1 160 231 284 354 1.91e-11 65.9
MS.gene065197.t1 AT4G22070 41.667 72 41 1 160 231 284 354 1.91e-11 65.9
MS.gene065197.t1 AT4G22070 41.667 72 41 1 160 231 284 354 1.91e-11 65.9
MS.gene065197.t1 AT4G22070 41.667 72 41 1 160 231 284 354 1.91e-11 65.9
MS.gene065197.t1 AT1G66600 48.276 58 28 1 174 229 103 160 2.06e-11 63.9
MS.gene065197.t1 AT4G04450 45.614 57 31 0 175 231 199 255 2.31e-11 65.5
MS.gene065197.t1 AT1G62300 45.614 57 31 0 175 231 313 369 2.66e-11 65.5
MS.gene065197.t1 AT2G25000 36.145 83 48 1 157 234 124 206 3.03e-11 63.9
MS.gene065197.t1 AT5G24110 37.975 79 47 1 160 236 99 177 4.23e-11 63.9
MS.gene065197.t1 AT4G04450 45.614 57 31 0 175 231 293 349 4.46e-11 64.7
MS.gene065197.t1 AT5G15130 45.000 60 33 0 175 234 186 245 5.59e-11 64.3
MS.gene065197.t1 AT3G62340 36.145 83 50 2 154 234 96 177 6.86e-11 62.8
MS.gene065197.t1 AT5G15130 45.000 60 33 0 175 234 228 287 7.15e-11 64.3
MS.gene065197.t1 AT4G01720 45.614 57 31 0 175 231 240 296 7.63e-11 63.9
MS.gene065197.t1 AT1G80840 39.062 64 39 0 172 235 144 207 8.44e-11 62.8

Find 93 sgRNAs with CRISPR-Local

Find 155 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCGATTTCACGTCGAAATT+TGG 0.080896 8.1:+36139174 None:intergenic
ATAAATTTCGCTTCTGTATA+CGG 0.189013 8.1:+36137521 None:intergenic
TGGATGTGAGGACCCTTTAA+TGG 0.244920 8.1:+36138802 None:intergenic
TCGATTTCACGTCGAAATTT+GGG 0.247314 8.1:+36139175 None:intergenic
TGGGGATTGTAGTATTATTC+TGG 0.273669 8.1:+36139194 None:intergenic
TCCCCAACATATTGAAGAAT+TGG 0.300711 8.1:-36137624 MS.gene065197:CDS
CTAGTTTGTGGTAGTTGAAT+TGG 0.323626 8.1:+36139106 None:intergenic
CAAAATTTAAATCAGGAAAA+AGG 0.334262 8.1:-36139048 MS.gene065197:intron
TCATGGAGATGGAGAAAATA+TGG 0.338703 8.1:-36138833 MS.gene065197:CDS
ATCCAATTCTTCAATATGTT+GGG 0.340320 8.1:+36137622 None:intergenic
GGTGGAGATGGGGATAGTGG+TGG 0.349627 8.1:+36139435 None:intergenic
ATGATTAACTCTAGTGCTAA+TGG 0.366249 8.1:-36139283 MS.gene065197:CDS
GGAGATGGGGATAGTGGTGG+GGG 0.368068 8.1:+36139438 None:intergenic
TTATAGGACTAGTGGTGGTG+GGG 0.369329 8.1:+36139323 None:intergenic
ATGGAGTTCCGATTATTTGC+TGG 0.373756 8.1:+36137866 None:intergenic
GTTGTGGTGGTAGGGATTAT+AGG 0.375777 8.1:+36139307 None:intergenic
GTAGTTGATTATGACTTCTC+TGG 0.383485 8.1:+36139128 None:intergenic
ATAAGGTTTCAGAGGATTCA+TGG 0.385027 8.1:-36138850 MS.gene065197:CDS
GGATGTGAGGACCCTTTAAT+GGG 0.387521 8.1:+36138803 None:intergenic
ACCCGAGCCTTGCTGCTCTC+TGG 0.394496 8.1:+36137722 None:intergenic
AGCTGCAACATTACCGCATT+AGG 0.400572 8.1:+36137752 None:intergenic
ACAATAAACCAGCAAATAAT+CGG 0.401514 8.1:-36137874 MS.gene065197:CDS
GTGGAGATGGGGATAGTGGT+GGG 0.402347 8.1:+36139436 None:intergenic
TCAACAGATGATTCAAACTT+TGG 0.410720 8.1:+36137818 None:intergenic
GATTATAGGACTAGTGGTGG+TGG 0.413064 8.1:+36139321 None:intergenic
AAACATGACACCTATGTTAG+AGG 0.415313 8.1:-36137465 MS.gene065197:CDS
GGTAGTAGGGGTAGTGGAGT+TGG 0.420421 8.1:+36139402 None:intergenic
GCCAGAGAGCAGCAAGGCTC+GGG 0.426732 8.1:-36137723 MS.gene065197:CDS
AATCCAATTCTTCAATATGT+TGG 0.427513 8.1:+36137621 None:intergenic
GGAATAGTGATGGTGGAGAT+GGG 0.428803 8.1:+36139424 None:intergenic
AAAGGTGATGGCAGTGGTGA+TGG 0.430730 8.1:+36139372 None:intergenic
AAATGATAATCAAGTATCAT+TGG 0.431401 8.1:-36138891 MS.gene065197:CDS
GGGAATAGTGATGGTGGAGA+TGG 0.435104 8.1:+36139423 None:intergenic
GATGGTGGAGATGGGGATAG+TGG 0.437402 8.1:+36139432 None:intergenic
TTTCACAAACATCATAAACT+TGG 0.439399 8.1:-36137780 MS.gene065197:CDS
AAGTTTGAATCATCTGTTGA+TGG 0.439589 8.1:-36137815 MS.gene065197:CDS
AAGGTGATGGCAGTGGTGAT+GGG 0.441027 8.1:+36139373 None:intergenic
TAATCATGGTTGTGGTGGTA+GGG 0.441097 8.1:+36139299 None:intergenic
GTAGTAGGGGTAGTGGAGTT+GGG 0.441918 8.1:+36139403 None:intergenic
ACTTATGAAGTGACATATCT+AGG 0.442305 8.1:-36137908 MS.gene065197:CDS
TACTGCAACATCATCATGTT+AGG 0.454150 8.1:+36137596 None:intergenic
TCTAACATAGGTGTCATGTT+TGG 0.456315 8.1:+36137467 None:intergenic
AAACGACCAAAATTTAAATC+AGG 0.456553 8.1:-36139055 MS.gene065197:CDS
ATTACCTGCCGAACAACAAC+AGG 0.466894 8.1:-36139227 MS.gene065197:CDS
GGCTTGAACCTGTTGTTGTT+CGG 0.469350 8.1:+36139219 None:intergenic
TAAATTTCGCTTCTGTATAC+GGG 0.471681 8.1:+36137522 None:intergenic
AGCCAGAGAGCAGCAAGGCT+CGG 0.475353 8.1:-36137724 MS.gene065197:CDS
GGTAATGGTAGTAGGGGTAG+TGG 0.478553 8.1:+36139396 None:intergenic
GATTGTAGTATTATTCTGGT+TGG 0.480965 8.1:+36139198 None:intergenic
GTATCATTGGTGAGCTATGT+GGG 0.490327 8.1:-36138878 MS.gene065197:CDS
TGAACCTGTTGTTGTTCGGC+AGG 0.492305 8.1:+36139223 None:intergenic
ATTATAGGACTAGTGGTGGT+GGG 0.498019 8.1:+36139322 None:intergenic
TTAATCATGGTTGTGGTGGT+AGG 0.500138 8.1:+36139298 None:intergenic
GTTGTTGTGGAACTAATTCA+TGG 0.500678 8.1:+36139152 None:intergenic
TATAGGACTAGTGGTGGTGG+GGG 0.501201 8.1:+36139324 None:intergenic
ACTTAGTCCTTTACCTACAC+TGG 0.501454 8.1:-36137660 MS.gene065197:CDS
AGCAAGGCTCGGGTTCTTGT+CGG 0.505919 8.1:-36137713 MS.gene065197:CDS
TGACTTCTCTGGAGTTGTTG+TGG 0.507145 8.1:+36139139 None:intergenic
ATTAGCACTAGAGTTAATCA+TGG 0.521704 8.1:+36139285 None:intergenic
TGGAGATGGGGATAGTGGTG+GGG 0.522513 8.1:+36139437 None:intergenic
TTCACAAACATCATAAACTT+GGG 0.528355 8.1:-36137779 MS.gene065197:CDS
GCTTTGCCCAGTGTAGGTAA+AGG 0.528650 8.1:+36137653 None:intergenic
TCTAGCTCAGTGAACTCACT+TGG 0.529778 8.1:+36139484 None:intergenic
GAGATGGGGATAGTGGTGGG+GGG 0.531742 8.1:+36139439 None:intergenic
TTTCAGAGGATTCATGGAGA+TGG 0.534538 8.1:-36138844 MS.gene065197:CDS
GGGGTGTTGATAGTTGTTGG+GGG 0.540872 8.1:+36139343 None:intergenic
CTTAGTCCTTTACCTACACT+GGG 0.545206 8.1:-36137659 MS.gene065197:CDS
CGATTTCACGTCGAAATTTG+GGG 0.547197 8.1:+36139176 None:intergenic
ACTAGAGTTAATCATGGTTG+TGG 0.553627 8.1:+36139291 None:intergenic
AAAGATCTAAAACTAGTTTG+TGG 0.559260 8.1:+36139094 None:intergenic
AGTATCATTGGTGAGCTATG+TGG 0.560291 8.1:-36138879 MS.gene065197:CDS
GGTGATGGCAGTGGTGATGG+GGG 0.562066 8.1:+36139375 None:intergenic
AGGTGATGGCAGTGGTGATG+GGG 0.563860 8.1:+36139374 None:intergenic
TCCAATTCTTCAATATGTTG+GGG 0.566906 8.1:+36137623 None:intergenic
TTAAAGGGTCCTCACATCCA+AGG 0.572922 8.1:-36138799 MS.gene065197:intron
TTGTTTAGCAAGAAAACAAG+TGG 0.573603 8.1:-36137954 MS.gene065197:CDS
AGTGGAGTTGGGAATAGTGA+TGG 0.587083 8.1:+36139414 None:intergenic
GAATAGTGATGGTGGAGATG+GGG 0.587695 8.1:+36139425 None:intergenic
AATGAGAAATCAGAAACGGC+GGG 0.597213 8.1:+36139247 None:intergenic
GGAGTTGGGAATAGTGATGG+TGG 0.605137 8.1:+36139417 None:intergenic
TGTACTAAAGGTGATGGCAG+TGG 0.608456 8.1:+36139366 None:intergenic
AGTTCACTGAGCTAGAACAA+TGG 0.612785 8.1:-36139477 MS.gene065197:CDS
AGAGTTAATCATGGTTGTGG+TGG 0.615137 8.1:+36139294 None:intergenic
ACTCCATTGTCGATAGCTCT+CGG 0.621472 8.1:-36137850 MS.gene065197:CDS
AGGTAATGAGAAATCAGAAA+CGG 0.625218 8.1:+36139243 None:intergenic
AAACTTGGGTTCTCCTAATG+CGG 0.633652 8.1:-36137765 MS.gene065197:CDS
GTACCGAGAGCTATCGACAA+TGG 0.639321 8.1:+36137847 None:intergenic
GGTAGGGATTATAGGACTAG+TGG 0.644053 8.1:+36139315 None:intergenic
TATCATTGGTGAGCTATGTG+GGG 0.653483 8.1:-36138877 MS.gene065197:CDS
TAATGAGAAATCAGAAACGG+CGG 0.658115 8.1:+36139246 None:intergenic
ATCATTGGTGAGCTATGTGG+GGG 0.659269 8.1:-36138876 MS.gene065197:CDS
AGGGATTATAGGACTAGTGG+TGG 0.676672 8.1:+36139318 None:intergenic
TGATCAGCCAGAGAGCAGCA+AGG 0.680979 8.1:-36137729 MS.gene065197:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAAAAAATATATATTTAT+AGG - chr8.1:36138657-36138676 MS.gene065197:intron 0.0%
!! AATTTATTCAATATTAACAT+TGG - chr8.1:36138479-36138498 MS.gene065197:intron 10.0%
!! ATATAAACACATATTTATAT+AGG + chr8.1:36138830-36138849 None:intergenic 10.0%
!! TTAATATTGAATAAATTTGT+GGG + chr8.1:36138476-36138495 None:intergenic 10.0%
!!! ATATGAATTTTACAAATATA+AGG + chr8.1:36138709-36138728 None:intergenic 10.0%
!! ATAATAAAAATCACTATGTA+AGG + chr8.1:36138736-36138755 None:intergenic 15.0%
!! ATATTCCATATGAATAAATT+TGG - chr8.1:36138549-36138568 MS.gene065197:intron 15.0%
!! GTTAATATTGAATAAATTTG+TGG + chr8.1:36138477-36138496 None:intergenic 15.0%
!! TAATAAAAATCACTATGTAA+GGG + chr8.1:36138735-36138754 None:intergenic 15.0%
!!! AATATACCACTTTTTTATTT+CGG + chr8.1:36138601-36138620 None:intergenic 15.0%
!!! ATATGTGTTTATATGATTTT+AGG - chr8.1:36138836-36138855 MS.gene065197:CDS 15.0%
!!! TTTTTTCTATAAGAAAAGAA+AGG + chr8.1:36137997-36138016 None:intergenic 15.0%
!! AAATGATAATCAAGTATCAT+TGG - chr8.1:36138014-36138033 MS.gene065197:intron 20.0%
!! AACAAAACAAAAAATCAAAG+AGG + chr8.1:36138404-36138423 None:intergenic 20.0%
!! AGGATTATAGAAAAAAGATA+AGG + chr8.1:36138436-36138455 None:intergenic 20.0%
!! ATTAAAATGTTGCAATTTAG+CGG - chr8.1:36138860-36138879 MS.gene065197:CDS 20.0%
!! CAAAATTTAAATCAGGAAAA+AGG - chr8.1:36137857-36137876 MS.gene065197:CDS 20.0%
!! GCATTTAAATGAGAAAAATA+TGG - chr8.1:36138224-36138243 MS.gene065197:intron 20.0%
!! TGATTCATATGAAAAAACAT+TGG + chr8.1:36139358-36139377 None:intergenic 20.0%
!!! AAGAAAGGTAAAATGATTTT+AGG + chr8.1:36137982-36138001 None:intergenic 20.0%
!!! CTTTTTCCTGATTTAAATTT+TGG + chr8.1:36137859-36137878 None:intergenic 20.0%
!!! TATCTTTTTTCTATAATCCT+TGG - chr8.1:36138436-36138455 MS.gene065197:intron 20.0%
! AAAAAGAATTCCTCTAACAT+AGG + chr8.1:36139453-36139472 None:intergenic 25.0%
! AAACGACCAAAATTTAAATC+AGG - chr8.1:36137850-36137869 MS.gene065197:CDS 25.0%
! AACAAATCTTTCACTTATTG+TGG - chr8.1:36138766-36138785 MS.gene065197:intron 25.0%
! AATCCAATTCTTCAATATGT+TGG + chr8.1:36139287-36139306 None:intergenic 25.0%
! ACAATAAACCAGCAAATAAT+CGG - chr8.1:36139031-36139050 MS.gene065197:intron 25.0%
! ATAAATTTCGCTTCTGTATA+CGG + chr8.1:36139387-36139406 None:intergenic 25.0%
! ATCCAATTCTTCAATATGTT+GGG + chr8.1:36139286-36139305 None:intergenic 25.0%
! CAAGTGGAAAAAATAAAAGA+TGG - chr8.1:36138967-36138986 MS.gene065197:intron 25.0%
! TTCACAAACATCATAAACTT+GGG - chr8.1:36139126-36139145 MS.gene065197:CDS 25.0%
! TTTCACAAACATCATAAACT+TGG - chr8.1:36139125-36139144 MS.gene065197:CDS 25.0%
!! AAAGATCTAAAACTAGTTTG+TGG + chr8.1:36137814-36137833 None:intergenic 25.0%
!! TATGTTAGAGGAATTCTTTT+TGG - chr8.1:36139452-36139471 MS.gene065197:CDS 25.0%
!! TTTTGAATGCTTAAAAACCT+TGG + chr8.1:36138126-36138145 None:intergenic 25.0%
!!! GATTTAAATTTTGGTCGTTT+TGG + chr8.1:36137850-36137869 None:intergenic 25.0%
!!! TAAAATGATTTTAGGTCACA+AGG + chr8.1:36137974-36137993 None:intergenic 25.0%
!!! TAAGTTCAGTTTTTAGATCA+GGG + chr8.1:36139230-36139249 None:intergenic 25.0%
AAGTTTGAATCATCTGTTGA+TGG - chr8.1:36139090-36139109 MS.gene065197:CDS 30.0%
ACTTATGAAGTGACATATCT+AGG - chr8.1:36138997-36139016 MS.gene065197:intron 30.0%
AGGTAATGAGAAATCAGAAA+CGG + chr8.1:36137665-36137684 None:intergenic 30.0%
ATCTTTCACTTATTGTGGTA+CGG - chr8.1:36138771-36138790 MS.gene065197:intron 30.0%
ATGATTAACTCTAGTGCTAA+TGG - chr8.1:36137622-36137641 MS.gene065197:CDS 30.0%
ATGGACAAAAACCCATTAAA+GGG - chr8.1:36138091-36138110 MS.gene065197:intron 30.0%
ATTAGCACTAGAGTTAATCA+TGG + chr8.1:36137623-36137642 None:intergenic 30.0%
GATTGTAGTATTATTCTGGT+TGG + chr8.1:36137710-36137729 None:intergenic 30.0%
TAAATGCAACTCTTTGCAAT+GGG + chr8.1:36138211-36138230 None:intergenic 30.0%
TAAATTTCGCTTCTGTATAC+GGG + chr8.1:36139386-36139405 None:intergenic 30.0%
TATGGACAAAAACCCATTAA+AGG - chr8.1:36138090-36138109 MS.gene065197:intron 30.0%
TCAACAGATGATTCAAACTT+TGG + chr8.1:36139090-36139109 None:intergenic 30.0%
TCCAATTCTTCAATATGTTG+GGG + chr8.1:36139285-36139304 None:intergenic 30.0%
TCCATATGAATAAATTTGGC+AGG - chr8.1:36138553-36138572 MS.gene065197:intron 30.0%
TCCTGCCAAATTTATTCATA+TGG + chr8.1:36138557-36138576 None:intergenic 30.0%
TTAAATGCAACTCTTTGCAA+TGG + chr8.1:36138212-36138231 None:intergenic 30.0%
TTGTTTAGCAAGAAAACAAG+TGG - chr8.1:36138951-36138970 MS.gene065197:intron 30.0%
! TTTTCTTGCTAAACAATCAC+TGG + chr8.1:36138947-36138966 None:intergenic 30.0%
!! CTAAGTTCAGTTTTTAGATC+AGG + chr8.1:36139231-36139250 None:intergenic 30.0%
AAACATGACACCTATGTTAG+AGG - chr8.1:36139440-36139459 MS.gene065197:CDS 35.0%
ACTAATTAAAACCCTTGGTG+TGG + chr8.1:36138184-36138203 None:intergenic 35.0%
ACTAGAGTTAATCATGGTTG+TGG + chr8.1:36137617-36137636 None:intergenic 35.0%
ATAAGGTTTCAGAGGATTCA+TGG - chr8.1:36138055-36138074 MS.gene065197:intron 35.0%
CAGAGACCGAAATAAAAAAG+TGG - chr8.1:36138592-36138611 MS.gene065197:intron 35.0%
GAACCACTAATTAAAACCCT+TGG + chr8.1:36138189-36138208 None:intergenic 35.0%
GGGAACTAAAAGAAATACCA+AGG + chr8.1:36138456-36138475 None:intergenic 35.0%
GTAGTTGATTATGACTTCTC+TGG + chr8.1:36137780-36137799 None:intergenic 35.0%
GTTGTTGTGGAACTAATTCA+TGG + chr8.1:36137756-36137775 None:intergenic 35.0%
TAATGAGAAATCAGAAACGG+CGG + chr8.1:36137662-36137681 None:intergenic 35.0%
TACTGCAACATCATCATGTT+AGG + chr8.1:36139312-36139331 None:intergenic 35.0%
TCATGGAGATGGAGAAAATA+TGG - chr8.1:36138072-36138091 MS.gene065197:intron 35.0%
TCCCCAACATATTGAAGAAT+TGG - chr8.1:36139281-36139300 MS.gene065197:CDS 35.0%
TCGATTTCACGTCGAAATTT+GGG + chr8.1:36137733-36137752 None:intergenic 35.0%
TGGGGATTGTAGTATTATTC+TGG + chr8.1:36137714-36137733 None:intergenic 35.0%
! CTAATTAAAACCCTTGGTGT+GGG + chr8.1:36138183-36138202 None:intergenic 35.0%
! CTAGTTTGTGGTAGTTGAAT+TGG + chr8.1:36137802-36137821 None:intergenic 35.0%
! TCTAACATAGGTGTCATGTT+TGG + chr8.1:36139441-36139460 None:intergenic 35.0%
!!! ACACCAAGGGTTTTAATTAG+TGG - chr8.1:36138183-36138202 MS.gene065197:intron 35.0%
!!! GGTCGTTTTGGTTTTGTATT+TGG + chr8.1:36137838-36137857 None:intergenic 35.0%
AAACTTGGGTTCTCCTAATG+CGG - chr8.1:36139140-36139159 MS.gene065197:CDS 40.0%
AATGAGAAATCAGAAACGGC+GGG + chr8.1:36137661-36137680 None:intergenic 40.0%
ACTTAGTCCTTTACCTACAC+TGG - chr8.1:36139245-36139264 MS.gene065197:CDS 40.0%
AGAGTTAATCATGGTTGTGG+TGG + chr8.1:36137614-36137633 None:intergenic 40.0%
AGTATCATTGGTGAGCTATG+TGG - chr8.1:36138026-36138045 MS.gene065197:intron 40.0%
AGTTCACTGAGCTAGAACAA+TGG - chr8.1:36137428-36137447 MS.gene065197:CDS 40.0%
ATGGAGTTCCGATTATTTGC+TGG + chr8.1:36139042-36139061 None:intergenic 40.0%
CGATTTCACGTCGAAATTTG+GGG + chr8.1:36137732-36137751 None:intergenic 40.0%
CTTAGTCCTTTACCTACACT+GGG - chr8.1:36139246-36139265 MS.gene065197:CDS 40.0%
GCTTAAAAACCTTGGATGTG+AGG + chr8.1:36138118-36138137 None:intergenic 40.0%
GTATCATTGGTGAGCTATGT+GGG - chr8.1:36138027-36138046 MS.gene065197:intron 40.0%
TAATCATGGTTGTGGTGGTA+GGG + chr8.1:36137609-36137628 None:intergenic 40.0%
TATCATTGGTGAGCTATGTG+GGG - chr8.1:36138028-36138047 MS.gene065197:intron 40.0%
TTAATCATGGTTGTGGTGGT+AGG + chr8.1:36137610-36137629 None:intergenic 40.0%
TTTCAGAGGATTCATGGAGA+TGG - chr8.1:36138061-36138080 MS.gene065197:intron 40.0%
! ATTATAGGACTAGTGGTGGT+GGG + chr8.1:36137586-36137605 None:intergenic 40.0%
! GTCGATTTCACGTCGAAATT+TGG + chr8.1:36137734-36137753 None:intergenic 40.0%
AATACACACACCCACACCAA+GGG - chr8.1:36138170-36138189 MS.gene065197:intron 45.0%
ACTCCATTGTCGATAGCTCT+CGG - chr8.1:36139055-36139074 MS.gene065197:CDS 45.0%
AGCTGCAACATTACCGCATT+AGG + chr8.1:36139156-36139175 None:intergenic 45.0%
AGTGGAGTTGGGAATAGTGA+TGG + chr8.1:36137494-36137513 None:intergenic 45.0%
ATCATTGGTGAGCTATGTGG+GGG - chr8.1:36138029-36138048 MS.gene065197:intron 45.0%
ATTACCTGCCGAACAACAAC+AGG - chr8.1:36137678-36137697 MS.gene065197:CDS 45.0%
CACTTATTGTGGTACGGAGT+TGG - chr8.1:36138777-36138796 MS.gene065197:intron 45.0%
GGATGTGAGGACCCTTTAAT+GGG + chr8.1:36138105-36138124 None:intergenic 45.0%
GGTAGGGATTATAGGACTAG+TGG + chr8.1:36137593-36137612 None:intergenic 45.0%
GTTGTGGTGGTAGGGATTAT+AGG + chr8.1:36137601-36137620 None:intergenic 45.0%
TAATACACACACCCACACCA+AGG - chr8.1:36138169-36138188 MS.gene065197:intron 45.0%
TGGATGTGAGGACCCTTTAA+TGG + chr8.1:36138106-36138125 None:intergenic 45.0%
TTAAAGGGTCCTCACATCCA+AGG - chr8.1:36138106-36138125 MS.gene065197:intron 45.0%
! AGGGATTATAGGACTAGTGG+TGG + chr8.1:36137590-36137609 None:intergenic 45.0%
! AGTTGTTGGGGGTGTACTAA+AGG + chr8.1:36137554-36137573 None:intergenic 45.0%
! GATTATAGGACTAGTGGTGG+TGG + chr8.1:36137587-36137606 None:intergenic 45.0%
! GATTTTGCTTTGCCCAGTGT+AGG + chr8.1:36139261-36139280 None:intergenic 45.0%
! GGCTTGAACCTGTTGTTGTT+CGG + chr8.1:36137689-36137708 None:intergenic 45.0%
! TCTAGCTCAGTGAACTCACT+TGG + chr8.1:36137424-36137443 None:intergenic 45.0%
! TGATGGGGGTAATGGTAGTA+GGG + chr8.1:36137519-36137538 None:intergenic 45.0%
! TGTACTAAAGGTGATGGCAG+TGG + chr8.1:36137542-36137561 None:intergenic 45.0%
! TTATAGGACTAGTGGTGGTG+GGG + chr8.1:36137585-36137604 None:intergenic 45.0%
!! GAATAGTGATGGTGGAGATG+GGG + chr8.1:36137483-36137502 None:intergenic 45.0%
!! GGAATAGTGATGGTGGAGAT+GGG + chr8.1:36137484-36137503 None:intergenic 45.0%
!! TGACTTCTCTGGAGTTGTTG+TGG + chr8.1:36137769-36137788 None:intergenic 45.0%
!! TGGGGGTGTTGATAGTTGTT+GGG + chr8.1:36137567-36137586 None:intergenic 45.0%
!! TGTAAAATATATTAAATAAT+AGG + chr8.1:36137896-36137915 None:intergenic 5.0%
GCTTTGCCCAGTGTAGGTAA+AGG + chr8.1:36139255-36139274 None:intergenic 50.0%
GGAGTTGGGAATAGTGATGG+TGG + chr8.1:36137491-36137510 None:intergenic 50.0%
GTACCGAGAGCTATCGACAA+TGG + chr8.1:36139061-36139080 None:intergenic 50.0%
! AAAGGTGATGGCAGTGGTGA+TGG + chr8.1:36137536-36137555 None:intergenic 50.0%
! AAGGTGATGGCAGTGGTGAT+GGG + chr8.1:36137535-36137554 None:intergenic 50.0%
! GATGGGGGTAATGGTAGTAG+GGG + chr8.1:36137518-36137537 None:intergenic 50.0%
! GGTAATGGTAGTAGGGGTAG+TGG + chr8.1:36137512-36137531 None:intergenic 50.0%
! GTGATGGGGGTAATGGTAGT+AGG + chr8.1:36137520-36137539 None:intergenic 50.0%
! TAGTGGTGGGGGGATTGAAT+TGG + chr8.1:36137459-36137478 None:intergenic 50.0%
! TGAACCTGTTGTTGTTCGGC+AGG + chr8.1:36137685-36137704 None:intergenic 50.0%
! TGGGGGTGTACTAAAGGTGA+TGG + chr8.1:36137548-36137567 None:intergenic 50.0%
!! GGGAATAGTGATGGTGGAGA+TGG + chr8.1:36137485-36137504 None:intergenic 50.0%
!! GGGGGTGTTGATAGTTGTTG+GGG + chr8.1:36137566-36137585 None:intergenic 50.0%
!! GGGGTGTTGATAGTTGTTGG+GGG + chr8.1:36137565-36137584 None:intergenic 50.0%
!! GTAGTAGGGGTAGTGGAGTT+GGG + chr8.1:36137505-36137524 None:intergenic 50.0%
!! GTGGGGGTGTTGATAGTTGT+TGG + chr8.1:36137568-36137587 None:intergenic 50.0%
!! TATAGGACTAGTGGTGGTGG+GGG + chr8.1:36137584-36137603 None:intergenic 50.0%
AGCAAGGCTCGGGTTCTTGT+CGG - chr8.1:36139192-36139211 MS.gene065197:CDS 55.0%
GAGCTATGTGGGGGCAGATA+AGG - chr8.1:36138038-36138057 MS.gene065197:intron 55.0%
GGGGGCAGATAAGGTTTCAG+AGG - chr8.1:36138047-36138066 MS.gene065197:intron 55.0%
TGATCAGCCAGAGAGCAGCA+AGG - chr8.1:36139176-36139195 MS.gene065197:CDS 55.0%
! AGGTGATGGCAGTGGTGATG+GGG + chr8.1:36137534-36137553 None:intergenic 55.0%
! GTGGAGATGGGGATAGTGGT+GGG + chr8.1:36137472-36137491 None:intergenic 55.0%
! TGGAGATGGGGATAGTGGTG+GGG + chr8.1:36137471-36137490 None:intergenic 55.0%
!! GATGGTGGAGATGGGGATAG+TGG + chr8.1:36137476-36137495 None:intergenic 55.0%
!! GGTAGTAGGGGTAGTGGAGT+TGG + chr8.1:36137506-36137525 None:intergenic 55.0%
AGCCAGAGAGCAGCAAGGCT+CGG - chr8.1:36139181-36139200 MS.gene065197:CDS 60.0%
! GAGATGGGGATAGTGGTGGG+GGG + chr8.1:36137469-36137488 None:intergenic 60.0%
! GGAGATGGGGATAGTGGTGG+GGG + chr8.1:36137470-36137489 None:intergenic 60.0%
! GGTGGAGATGGGGATAGTGG+TGG + chr8.1:36137473-36137492 None:intergenic 60.0%
!! GGCAGTGGTGATGGGGGTAA+TGG + chr8.1:36137527-36137546 None:intergenic 60.0%
!! GGTGATGGCAGTGGTGATGG+GGG + chr8.1:36137533-36137552 None:intergenic 60.0%
ACCCGAGCCTTGCTGCTCTC+TGG + chr8.1:36139186-36139205 None:intergenic 65.0%
GCCAGAGAGCAGCAAGGCTC+GGG - chr8.1:36139182-36139201 MS.gene065197:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 36137415 36139512 36137415 ID=MS.gene065197
chr8.1 mRNA 36137415 36139512 36137415 ID=MS.gene065197.t1;Parent=MS.gene065197
chr8.1 exon 36139049 36139512 36139049 ID=MS.gene065197.t1.exon1;Parent=MS.gene065197.t1
chr8.1 CDS 36139049 36139512 36139049 ID=cds.MS.gene065197.t1;Parent=MS.gene065197.t1
chr8.1 exon 36138800 36138916 36138800 ID=MS.gene065197.t1.exon2;Parent=MS.gene065197.t1
chr8.1 CDS 36138800 36138916 36138800 ID=cds.MS.gene065197.t1;Parent=MS.gene065197.t1
chr8.1 exon 36137415 36138006 36137415 ID=MS.gene065197.t1.exon3;Parent=MS.gene065197.t1
chr8.1 CDS 36137415 36138006 36137415 ID=cds.MS.gene065197.t1;Parent=MS.gene065197.t1
Gene Sequence

>MS.gene065197

ATGCAGCCAAGTGAGTTCACTGAGCTAGAACAATGGATGCTCCAATTCAATCCCCCCACCACTATCCCCATCTCCACCATCACTATTCCCAACTCCACTACCCCTACTACCATTACCCCCATCACCACTGCCATCACCTTTAGTACACCCCCAACAACTATCAACACCCCCACCACCACTAGTCCTATAATCCCTACCACCACAACCATGATTAACTCTAGTGCTAATGGACTCAATCAATATCCCGCCGTTTCTGATTTCTCATTACCTGCCGAACAACAACAGGTTCAAGCCAACCAGAATAATACTACAATCCCCAAATTTCGACGTGAAATCGACCATGAATTAGTTCCACAACAACTCCAGAGAAGTCATAATCAACTACCAATTCAACTACCACAAACTAGTTTTAGATCTTTACCAAATACAAAACCAAAACGACCAAAATTTAAATCAGGAAAAAGGTAAAGTATTGATTCCTATTATTTAATATATTTTACATATAAGTATATTTCATTGTATTAAAATTATTAATTTTTTTTTACATATGTTAACTCCTTGTGACCTAAAATCATTTTACCTTTCTTTTCTTATAGAAAAAATGATAATCAAGTATCATTGGTGAGCTATGTGGGGGCAGATAAGGTTTCAGAGGATTCATGGAGATGGAGAAAATATGGACAAAAACCCATTAAAGGGTCCTCACATCCAAGGTTTTTAAGCATTCAAAACTCTAACGTTCATATATTTTTCTTAATACACACACCCACACCAAGGGTTTTAATTAGTGGTTCCCATTGCAAAGAGTTGCATTTAAATGAGAAAAATATGGTCTTAGTCATAGTTGTGTCTTCTTTTCAATTTTGAAAAAATAAAAAATTGTTAGTCTTATTTTCACTGAACGACACATTTGAAAAATAAAAATTTATTACAAAATAAAATAAAATATTTTAAGATCTTGTATATGCATCACTTTTTGCTTTTAGCCTCTTTGATTTTTTGTTTTGTTTTTGTTGTTCCTTATCTTTTTTCTATAATCCTTGGTATTTCTTTTAGTTCCCACAAATTTATTCAATATTAACATTGGTTTCTTTAATAATAATTTTAACACTTATCTTGATGTACGAAAGTCAAATATTCCATATGAATAAATTTGGCAGGAATTCAAATAAAATAACAGAGACCGAAATAAAAAAGTGGTATATTTGCAAAAGCAAAAAAAAAAATAATACGAAGACTAAATTTAAAAAATATATATTTATAGGAATCAAAAACATATTTAAATCTTTCACCTTATATTTGTAAAATTCATATTTTCCCTTACATAGTGATTTTTATTATGTATAAATTAAACAAATCTTTCACTTATTGTGGTACGGAGTTGGATTGCATAGCTTTTTGTAATATCATAGCCTATATAAATATGTGTTTATATGATTTTAGGTATTAAAATGTTGCAATTTAGCGGTGTTTGATATAAAAAATAATCAATGAATGATTTTGCAGAAGCTACTACAAATGTAGCAGTTCCAGTGATTGTTTAGCAAGAAAACAAGTGGAAAAAATAAAAGATGGAGATGACACTTATGAAGTGACATATCTAGGAGAACACAATCACAATAAACCAGCAAATAATCGGAACTCCATTGTCGATAGCTCTCGGTACATGTCACCAAAGTTTGAATCATCTGTTGATGGAGAAGCTAGATGTTTCACAAACATCATAAACTTGGGTTCTCCTAATGCGGTAATGTTGCAGCTTGATCAGCCAGAGAGCAGCAAGGCTCGGGTTCTTGTCGGTCAATCAAAAATCCCTGATCTAAAAACTGAACTTAGTCCTTTACCTACACTGGGCAAAGCAAAATCTCCCCAACATATTGAAGAATTGGATTCACCTAACATGATGATGTTGCAGTATGATCAGCAGAAGAGCGAAAATTCCAATGTTTTTTCATATGAATCAGAAATCCCGTATACAGAAGCGAAATTTATTGAAAGCTTCAAAGAAGATGAAATTTTGATACCAAACATGACACCTATGTTAGAGGAATTCTTTTTGGATTTCAACAATGTCAATAGTTGTGCTCTATTCCATTAG
Protein sequence

>MS.gene065197.t1

MQPSEFTELEQWMLQFNPPTTIPISTITIPNSTTPTTITPITTAITFSTPPTTINTPTTTSPIIPTTTTMINSSANGLNQYPAVSDFSLPAEQQQVQANQNNTTIPKFRREIDHELVPQQLQRSHNQLPIQLPQTSFRSLPNTKPKRPKFKSGKRKNDNQVSLVSYVGADKVSEDSWRWRKYGQKPIKGSSHPRSYYKCSSSSDCLARKQVEKIKDGDDTYEVTYLGEHNHNKPANNRNSIVDSSRYMSPKFESSVDGEARCFTNIINLGSPNAVMLQLDQPESSKARVLVGQSKIPDLKTELSPLPTLGKAKSPQHIEELDSPNMMMLQYDQQKSENSNVFSYESEIPYTEAKFIESFKEDEILIPNMTPMLEEFFLDFNNVNSCALFH