Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065779.t1 | XP_024638164.1 | 98.2 | 493 | 9 | 0 | 1 | 493 | 1 | 493 | 2.80E-270 | 940.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065779.t1 | Q84T61 | 49.6 | 492 | 208 | 14 | 14 | 490 | 39 | 505 | 1.8e-103 | 377.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065779.t1 | G7JSS3 | 98.2 | 493 | 9 | 0 | 1 | 493 | 1 | 493 | 2.0e-270 | 940.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene065779.t1 | TF | HSF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065779.t1 | MTR_4g077970 | 98.174 | 493 | 9 | 0 | 1 | 493 | 1 | 493 | 0.0 | 1006 |
| MS.gene065779.t1 | MTR_4g077970 | 97.977 | 346 | 7 | 0 | 148 | 493 | 1 | 346 | 0.0 | 694 |
| MS.gene065779.t1 | MTR_5g029680 | 46.800 | 500 | 214 | 17 | 11 | 489 | 31 | 499 | 8.41e-128 | 381 |
| MS.gene065779.t1 | MTR_3g104550 | 54.260 | 223 | 90 | 3 | 11 | 233 | 45 | 255 | 3.83e-74 | 239 |
| MS.gene065779.t1 | MTR_7g095680 | 56.522 | 207 | 87 | 1 | 11 | 217 | 48 | 251 | 4.68e-74 | 238 |
| MS.gene065779.t1 | MTR_1g102860 | 55.714 | 210 | 82 | 4 | 11 | 217 | 39 | 240 | 1.54e-69 | 225 |
| MS.gene065779.t1 | MTR_1g061170 | 41.254 | 303 | 151 | 6 | 10 | 309 | 47 | 325 | 2.54e-69 | 229 |
| MS.gene065779.t1 | MTR_1g071360 | 51.643 | 213 | 83 | 3 | 12 | 221 | 32 | 227 | 2.96e-63 | 209 |
| MS.gene065779.t1 | MTR_1g071360 | 51.174 | 213 | 84 | 3 | 12 | 221 | 29 | 224 | 5.38e-63 | 209 |
| MS.gene065779.t1 | MTR_8g105780 | 42.537 | 268 | 146 | 2 | 12 | 278 | 22 | 282 | 7.99e-63 | 209 |
| MS.gene065779.t1 | MTR_2g100680 | 43.602 | 211 | 108 | 2 | 12 | 222 | 31 | 230 | 2.72e-54 | 189 |
| MS.gene065779.t1 | MTR_8g083100 | 45.498 | 211 | 103 | 3 | 13 | 223 | 23 | 221 | 5.54e-54 | 189 |
| MS.gene065779.t1 | MTR_6g043060 | 42.986 | 221 | 114 | 3 | 2 | 222 | 12 | 220 | 6.03e-54 | 184 |
| MS.gene065779.t1 | MTR_8g087540 | 44.865 | 185 | 94 | 2 | 10 | 193 | 10 | 187 | 5.63e-52 | 181 |
| MS.gene065779.t1 | MTR_2g100670 | 46.486 | 185 | 89 | 1 | 12 | 196 | 33 | 207 | 3.54e-51 | 176 |
| MS.gene065779.t1 | MTR_6g086805 | 44.811 | 212 | 105 | 6 | 7 | 218 | 6 | 205 | 1.02e-50 | 176 |
| MS.gene065779.t1 | MTR_2g100670 | 46.486 | 185 | 89 | 1 | 12 | 196 | 141 | 315 | 3.63e-50 | 177 |
| MS.gene065779.t1 | MTR_2g017890 | 39.683 | 189 | 103 | 2 | 10 | 194 | 13 | 194 | 1.73e-44 | 160 |
| MS.gene065779.t1 | MTR_5g010680 | 65.217 | 92 | 32 | 0 | 12 | 103 | 24 | 115 | 1.20e-39 | 147 |
| MS.gene065779.t1 | MTR_3g101870 | 42.640 | 197 | 64 | 4 | 9 | 156 | 21 | 217 | 2.13e-39 | 147 |
| MS.gene065779.t1 | MTR_0020s0020 | 65.217 | 92 | 32 | 0 | 12 | 103 | 33 | 124 | 9.15e-38 | 141 |
| MS.gene065779.t1 | MTR_1g061170 | 35.685 | 241 | 128 | 6 | 72 | 309 | 14 | 230 | 4.29e-37 | 140 |
| MS.gene065779.t1 | MTR_5g017470 | 62.366 | 93 | 35 | 0 | 12 | 104 | 9 | 101 | 8.16e-37 | 137 |
| MS.gene065779.t1 | MTR_1g100777 | 60.870 | 92 | 36 | 0 | 12 | 103 | 18 | 109 | 6.80e-36 | 135 |
| MS.gene065779.t1 | MTR_5g089170 | 61.290 | 93 | 36 | 0 | 12 | 104 | 25 | 117 | 2.49e-34 | 130 |
| MS.gene065779.t1 | MTR_7g091370 | 42.484 | 153 | 77 | 2 | 12 | 157 | 22 | 170 | 2.83e-31 | 120 |
| MS.gene065779.t1 | MTR_4g088900 | 54.639 | 97 | 40 | 1 | 12 | 104 | 33 | 129 | 1.55e-30 | 118 |
| MS.gene065779.t1 | MTR_5g047190 | 48.936 | 94 | 41 | 2 | 20 | 106 | 1 | 94 | 1.85e-21 | 89.4 |
| MS.gene065779.t1 | MTR_6g044340 | 28.910 | 211 | 129 | 6 | 58 | 267 | 8 | 198 | 4.08e-18 | 84.7 |
| MS.gene065779.t1 | MTR_4g045757 | 58.333 | 60 | 25 | 0 | 10 | 69 | 12 | 71 | 9.69e-18 | 78.2 |
| MS.gene065779.t1 | MTR_2g043940 | 32.593 | 135 | 70 | 3 | 69 | 193 | 17 | 140 | 4.04e-14 | 74.3 |
| MS.gene065779.t1 | MTR_1g061170 | 30.909 | 165 | 95 | 4 | 148 | 309 | 1 | 149 | 1.72e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065779.t1 | AT5G16820 | 48.491 | 497 | 196 | 11 | 10 | 489 | 25 | 478 | 1.62e-136 | 403 |
| MS.gene065779.t1 | AT5G16820 | 48.491 | 497 | 196 | 11 | 10 | 489 | 25 | 478 | 1.62e-136 | 403 |
| MS.gene065779.t1 | AT3G02990 | 48.441 | 481 | 211 | 9 | 10 | 489 | 21 | 465 | 1.97e-131 | 389 |
| MS.gene065779.t1 | AT1G32330 | 44.177 | 498 | 219 | 14 | 3 | 489 | 28 | 477 | 2.10e-116 | 351 |
| MS.gene065779.t1 | AT1G32330 | 44.177 | 498 | 219 | 14 | 3 | 489 | 28 | 477 | 3.08e-116 | 351 |
| MS.gene065779.t1 | AT4G17750 | 43.340 | 503 | 211 | 16 | 6 | 489 | 46 | 493 | 4.97e-111 | 338 |
| MS.gene065779.t1 | AT2G26150 | 58.095 | 210 | 80 | 2 | 11 | 218 | 43 | 246 | 1.78e-80 | 254 |
| MS.gene065779.t1 | AT2G26150 | 58.095 | 210 | 80 | 2 | 11 | 218 | 43 | 246 | 1.78e-80 | 254 |
| MS.gene065779.t1 | AT3G22830 | 56.731 | 208 | 89 | 1 | 11 | 217 | 60 | 267 | 3.73e-74 | 240 |
| MS.gene065779.t1 | AT1G67970 | 44.366 | 284 | 131 | 8 | 10 | 286 | 17 | 280 | 8.49e-64 | 212 |
| MS.gene065779.t1 | AT5G03720 | 44.351 | 239 | 112 | 5 | 10 | 243 | 53 | 275 | 5.26e-61 | 206 |
| MS.gene065779.t1 | AT5G03720 | 44.351 | 239 | 112 | 5 | 10 | 243 | 53 | 275 | 5.26e-61 | 206 |
| MS.gene065779.t1 | AT3G51910 | 44.700 | 217 | 95 | 3 | 4 | 216 | 21 | 216 | 1.66e-57 | 192 |
| MS.gene065779.t1 | AT4G13980 | 44.928 | 207 | 101 | 3 | 13 | 218 | 24 | 218 | 5.86e-56 | 194 |
| MS.gene065779.t1 | AT3G24520 | 42.925 | 212 | 90 | 4 | 9 | 218 | 14 | 196 | 4.30e-52 | 179 |
| MS.gene065779.t1 | AT5G43840 | 39.834 | 241 | 102 | 6 | 11 | 244 | 16 | 220 | 1.85e-50 | 174 |
| MS.gene065779.t1 | AT4G18880 | 37.134 | 307 | 172 | 6 | 4 | 308 | 7 | 294 | 2.09e-48 | 172 |
| MS.gene065779.t1 | AT5G54070 | 41.538 | 195 | 99 | 1 | 9 | 203 | 68 | 247 | 5.88e-48 | 169 |
| MS.gene065779.t1 | AT3G63350 | 44.103 | 195 | 97 | 2 | 12 | 205 | 28 | 211 | 2.15e-47 | 166 |
| MS.gene065779.t1 | AT2G26150 | 56.376 | 149 | 57 | 2 | 72 | 218 | 49 | 191 | 4.36e-47 | 165 |
| MS.gene065779.t1 | AT2G26150 | 56.376 | 149 | 57 | 2 | 72 | 218 | 49 | 191 | 4.36e-47 | 165 |
| MS.gene065779.t1 | AT5G45710 | 40.889 | 225 | 111 | 5 | 10 | 232 | 11 | 215 | 7.68e-47 | 166 |
| MS.gene065779.t1 | AT5G45710 | 40.889 | 225 | 111 | 5 | 10 | 232 | 11 | 215 | 7.68e-47 | 166 |
| MS.gene065779.t1 | AT1G46264 | 41.624 | 197 | 74 | 3 | 1 | 156 | 23 | 219 | 9.57e-42 | 152 |
| MS.gene065779.t1 | AT5G62020 | 61.702 | 94 | 36 | 0 | 12 | 105 | 23 | 116 | 5.38e-37 | 138 |
| MS.gene065779.t1 | AT4G36990 | 52.672 | 131 | 48 | 2 | 1 | 129 | 1 | 119 | 1.25e-36 | 137 |
| MS.gene065779.t1 | AT4G11660 | 59.783 | 92 | 37 | 0 | 12 | 103 | 59 | 150 | 1.05e-34 | 134 |
| MS.gene065779.t1 | AT2G41690 | 55.000 | 100 | 45 | 0 | 11 | 110 | 39 | 138 | 7.66e-33 | 125 |
| MS.gene065779.t1 | AT4G18870 | 39.773 | 88 | 53 | 0 | 12 | 99 | 146 | 233 | 7.61e-19 | 87.4 |
| MS.gene065779.t1 | AT4G18870 | 43.820 | 89 | 45 | 2 | 13 | 99 | 14 | 99 | 1.61e-18 | 86.3 |
| MS.gene065779.t1 | AT1G77570 | 37.778 | 90 | 53 | 2 | 13 | 99 | 27 | 116 | 2.11e-15 | 73.9 |
Find 112 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAGGTTCCACCTATTTC+TGG | 0.099338 | 4.4:+32554581 | MS.gene065779:CDS |
| AGTTCATCCACCCAAGTTTC+TGG | 0.190167 | 4.4:+32554548 | MS.gene065779:CDS |
| AGCACACCAAGACAATATTT+TGG | 0.232538 | 4.4:+32554733 | MS.gene065779:CDS |
| CAGGAATCAACGATGAATTC+TGG | 0.282845 | 4.4:+32554936 | MS.gene065779:CDS |
| TTTAGGCCAAGCCCACTTAC+TGG | 0.290833 | 4.4:+32554968 | MS.gene065779:CDS |
| TGGTGTGCTGTTGTAAATTC+TGG | 0.291113 | 4.4:-32554719 | None:intergenic |
| GGATGTGATATCAGCTGTTT+TGG | 0.314761 | 4.4:+32554850 | MS.gene065779:CDS |
| TTGTTGTGTTTGAAATATTT+AGG | 0.323777 | 4.4:-32553134 | None:intergenic |
| AAAGGTAGTTCTCTAGGATA+TGG | 0.328048 | 4.4:+32555007 | MS.gene065779:CDS |
| AAGAGGATTATGTGGATTCT+TGG | 0.333992 | 4.4:-32554360 | None:intergenic |
| CAACCGAATCGATCGTTTCA+TGG | 0.334490 | 4.4:+32553051 | MS.gene065779:CDS |
| TTTGGATGGGACACGGTCTT+TGG | 0.334831 | 4.4:+32554868 | MS.gene065779:CDS |
| ATACATGACTGCCCAGAAAT+AGG | 0.338814 | 4.4:-32554593 | None:intergenic |
| AACTGTTCATTTGCAACATC+TGG | 0.343307 | 4.4:-32554442 | None:intergenic |
| CTATTGGTCATACAACTTAC+AGG | 0.350342 | 4.4:-32554635 | None:intergenic |
| TGTGTGGAAGTGGGTAAGTT+TGG | 0.353975 | 4.4:+32554050 | MS.gene065779:CDS |
| CTGAAGGAACATCATCAATA+AGG | 0.355963 | 4.4:-32554505 | None:intergenic |
| TCTTTGCTAATGACAATTCC+TGG | 0.358563 | 4.4:-32555042 | None:intergenic |
| CTGAGGTTCCACCTATTTCT+GGG | 0.367826 | 4.4:+32554582 | MS.gene065779:CDS |
| TTTGCAGCCTCATTAATAGA+AGG | 0.376695 | 4.4:-32554407 | None:intergenic |
| CATGAATAGTCCGGGCTTCA+TGG | 0.377627 | 4.4:+32554244 | MS.gene065779:CDS |
| CAGAATTCATCGTTGATTCC+TGG | 0.379940 | 4.4:-32554935 | None:intergenic |
| GGAGACACAGACGAAGTTAA+AGG | 0.386040 | 4.4:+32554989 | MS.gene065779:CDS |
| AATCCACATAATCCTCTTGA+TGG | 0.386726 | 4.4:+32554365 | MS.gene065779:CDS |
| CCTAAGCAAAACCTACGATA+TGG | 0.391487 | 4.4:+32553016 | MS.gene065779:CDS |
| ATATTTAGGCAAGATGTGTT+TGG | 0.394875 | 4.4:-32553120 | None:intergenic |
| GTGTCTCCAGTAAGTGGGCT+TGG | 0.409905 | 4.4:-32554974 | None:intergenic |
| CGGTGAGAATGATGATGAAT+TGG | 0.410275 | 4.4:+32554829 | MS.gene065779:CDS |
| CATGAAGCCCGGACTATTCA+TGG | 0.411920 | 4.4:-32554243 | None:intergenic |
| GATGAACTACTGCTATCTAA+TGG | 0.419987 | 4.4:-32554533 | None:intergenic |
| ATTTGTTAAAGAATATCAAT+AGG | 0.421836 | 4.4:+32553958 | MS.gene065779:CDS |
| TGAGCGAATTCCCAGCGGTC+GGG | 0.422148 | 4.4:-32553909 | None:intergenic |
| ATCGTTGATTCCTGGAAGCT+TGG | 0.423687 | 4.4:-32554927 | None:intergenic |
| GTGTGGAAGTGGGTAAGTTT+GGG | 0.436120 | 4.4:+32554051 | MS.gene065779:CDS |
| AACCGAATCGATCGTTTCAT+GGG | 0.436953 | 4.4:+32553052 | MS.gene065779:CDS |
| CAAGATGTGTTTGGAGAAAT+CGG | 0.437903 | 4.4:-32553111 | None:intergenic |
| GTTGCCCAACATTTACCAAT+TGG | 0.441846 | 4.4:-32554166 | None:intergenic |
| AATGAAAATTCCAAGCTTCC+AGG | 0.444171 | 4.4:+32554917 | MS.gene065779:CDS |
| GAATGCATCAAGGTTCTTGA+TGG | 0.448987 | 4.4:-32554483 | None:intergenic |
| GATAACCAATTGGTAAATGT+TGG | 0.452224 | 4.4:+32554161 | MS.gene065779:CDS |
| CGGAAATCTACTCATGCAAA+TGG | 0.457161 | 4.4:+32553981 | MS.gene065779:CDS |
| AGCAAAGGCCATGAATAGTC+CGG | 0.460979 | 4.4:+32554235 | MS.gene065779:CDS |
| GGATCGCGAATTATGACAGC+TGG | 0.461443 | 4.4:+32552966 | None:intergenic |
| GAAGATTCAACAAGAAAAGA+TGG | 0.461849 | 4.4:+32555063 | MS.gene065779:CDS |
| AAAGAGGCGGCTCCAGGGGC+AGG | 0.463211 | 4.4:+32554319 | MS.gene065779:CDS |
| ATAACCAATTGGTAAATGTT+GGG | 0.467159 | 4.4:+32554162 | MS.gene065779:CDS |
| AAAGTGTTACACCAGAAACT+TGG | 0.470921 | 4.4:-32554559 | None:intergenic |
| AACTATCTTCATCCTGCCCC+TGG | 0.473972 | 4.4:-32554331 | None:intergenic |
| AGGAATCAACGATGAATTCT+GGG | 0.476706 | 4.4:+32554937 | MS.gene065779:CDS |
| TGTTGGGTCATGTGTGGAAG+TGG | 0.480175 | 4.4:+32554040 | MS.gene065779:CDS |
| AGCCGCAGAACCCACCTGTT+GGG | 0.484089 | 4.4:+32554024 | MS.gene065779:CDS |
| GAAAGGTTGACCCCGACCGC+TGG | 0.485865 | 4.4:+32553898 | MS.gene065779:CDS |
| AAGAGGTTGAAAGACTGAAA+AGG | 0.488568 | 4.4:+32554081 | MS.gene065779:CDS |
| TATTTCTGGGCAGTCATGTA+TGG | 0.490052 | 4.4:+32554595 | MS.gene065779:CDS |
| GTTCAATTGTCTGACGAAGC+TGG | 0.491130 | 4.4:-32553162 | None:intergenic |
| AGAGGTTGAAAGACTGAAAA+GGG | 0.491243 | 4.4:+32554082 | MS.gene065779:CDS |
| GACTATTCATGGCCTTTGCT+AGG | 0.492617 | 4.4:-32554232 | None:intergenic |
| GAGCGAATTCCCAGCGGTCG+GGG | 0.492924 | 4.4:-32553908 | None:intergenic |
| ACAATCGACTGATAACCAAT+TGG | 0.498524 | 4.4:+32554151 | MS.gene065779:CDS |
| ACCCCATGAAACGATCGATT+CGG | 0.504242 | 4.4:-32553054 | None:intergenic |
| ACTTCCACACATGACCCAAC+AGG | 0.505692 | 4.4:-32554038 | None:intergenic |
| TCGTCTGTGTCTCCAGTAAG+TGG | 0.508093 | 4.4:-32554980 | None:intergenic |
| GAAGTTAAAGGTAGTTCTCT+AGG | 0.508241 | 4.4:+32555001 | MS.gene065779:CDS |
| TTCTGGTGTAACACTTTCTG+AGG | 0.510063 | 4.4:+32554565 | MS.gene065779:CDS |
| CAAAATCCAAAATATTGTCT+TGG | 0.518046 | 4.4:-32554739 | None:intergenic |
| GTACCAGCCTTCTATTAATG+AGG | 0.518867 | 4.4:+32554400 | MS.gene065779:CDS |
| TTGTACCTCAGACATGCTAT+TGG | 0.521476 | 4.4:-32554651 | None:intergenic |
| GTTCCATCTGTTGAGTAAGA+TGG | 0.529932 | 4.4:-32555105 | None:intergenic |
| CGCTGGGAATTCGCTCATGA+AGG | 0.530003 | 4.4:+32553915 | MS.gene065779:CDS |
| CAGCCTCATTAATAGAAGGC+TGG | 0.531526 | 4.4:-32554403 | None:intergenic |
| CGTCCATCAAGAGGATTATG+TGG | 0.541079 | 4.4:-32554368 | None:intergenic |
| CATCAATAAGGAATGCATCA+AGG | 0.541216 | 4.4:-32554493 | None:intergenic |
| AAAGGTTGACCCCGACCGCT+GGG | 0.545860 | 4.4:+32553899 | MS.gene065779:CDS |
| GAAAATTGAGCCATGAAGCC+CGG | 0.546699 | 4.4:-32554254 | None:intergenic |
| ACAGATGGAACTTCTTGCAT+CGG | 0.548170 | 4.4:+32555117 | MS.gene065779:CDS |
| AAGCCGCAGAACCCACCTGT+TGG | 0.557194 | 4.4:+32554023 | MS.gene065779:CDS |
| TAAGTTTGGGCTTGATGAAG+AGG | 0.559114 | 4.4:+32554064 | MS.gene065779:CDS |
| GCAAAGGCCATGAATAGTCC+GGG | 0.565582 | 4.4:+32554236 | MS.gene065779:CDS |
| AATGAACAGTTCTGCAAGGG+TGG | 0.569475 | 4.4:+32554454 | MS.gene065779:CDS |
| ATGAGCGAATTCCCAGCGGT+CGG | 0.572798 | 4.4:-32553910 | None:intergenic |
| GATGATGTCGTTCCTAGCAA+AGG | 0.573149 | 4.4:+32554220 | MS.gene065779:CDS |
| ATATGGTTTGACTAAAGACC+AGG | 0.574236 | 4.4:+32555024 | MS.gene065779:CDS |
| GGACCATCTTACTCAACAGA+TGG | 0.577724 | 4.4:+32555102 | MS.gene065779:CDS |
| AAGTGTTACACCAGAAACTT+GGG | 0.578836 | 4.4:-32554558 | None:intergenic |
| CTATCTAATGGAATGGCTGA+AGG | 0.583304 | 4.4:-32554521 | None:intergenic |
| TCCACACATGACCCAACAGG+TGG | 0.591825 | 4.4:-32554035 | None:intergenic |
| AGGATTATGTGGATTCTTGG+TGG | 0.592009 | 4.4:-32554357 | None:intergenic |
| GACCCAACAGGTGGGTTCTG+CGG | 0.593008 | 4.4:-32554026 | None:intergenic |
| AGTAATAGACATGTTACCGC+TGG | 0.593286 | 4.4:+32554293 | MS.gene065779:CDS |
| CGTCTGTGTCTCCAGTAAGT+GGG | 0.594211 | 4.4:-32554979 | None:intergenic |
| ACACAATCAGTCAACACAGC+AGG | 0.595480 | 4.4:-32554680 | None:intergenic |
| TGTAAATTCTGGAAATTCAG+CGG | 0.596634 | 4.4:-32554708 | None:intergenic |
| TGCATCAAGGTTCTTGATGG+AGG | 0.607948 | 4.4:-32554480 | None:intergenic |
| AGAGTCATCAACCATATCGT+AGG | 0.608336 | 4.4:-32553027 | None:intergenic |
| TGGGCAACGTGTGCAAGTGA+TGG | 0.618938 | 4.4:+32554181 | MS.gene065779:CDS |
| TTAACAACACGTCCATCAAG+AGG | 0.623081 | 4.4:-32554377 | None:intergenic |
| ACTACTGCTATCTAATGGAA+TGG | 0.639316 | 4.4:-32554528 | None:intergenic |
| CCCACCTGTTGGGTCATGTG+TGG | 0.640259 | 4.4:+32554034 | MS.gene065779:CDS |
| GATCGCGAATTATGACAGCT+GGG | 0.642062 | 4.4:+32552967 | None:intergenic |
| TGTTAAAGAATATCAATAGG+CGG | 0.647648 | 4.4:+32553961 | MS.gene065779:CDS |
| TATGACCAATAGCATGTCTG+AGG | 0.654015 | 4.4:+32554646 | MS.gene065779:CDS |
| TGCAAATGAACAGTTCTGCA+AGG | 0.655638 | 4.4:+32554450 | MS.gene065779:CDS |
| CATGACTGCCCAGAAATAGG+TGG | 0.662832 | 4.4:-32554590 | None:intergenic |
| GTTGGGTCATGTGTGGAAGT+GGG | 0.670827 | 4.4:+32554041 | MS.gene065779:CDS |
| ACCGAATCGATCGTTTCATG+GGG | 0.677166 | 4.4:+32553053 | MS.gene065779:CDS |
| GCAAATGAACAGTTCTGCAA+GGG | 0.681864 | 4.4:+32554451 | MS.gene065779:CDS |
| GATGGATAAGATACAGCACA+TGG | 0.683473 | 4.4:+32555081 | MS.gene065779:CDS |
| CCACACATGACCCAACAGGT+GGG | 0.694523 | 4.4:-32554034 | None:intergenic |
| TGTTACACCAGAAACTTGGG+TGG | 0.706092 | 4.4:-32554555 | None:intergenic |
| GGTGGAATTGAAAACGACGA+AGG | 0.715764 | 4.4:-32553090 | None:intergenic |
| GATGTGTTTGGAGAAATCGG+TGG | 0.725221 | 4.4:-32553108 | None:intergenic |
| CTTCATGAGCGAATTCCCAG+CGG | 0.750748 | 4.4:-32553914 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTCTTAGAAAATATTCAT+CGG | - | chr4.4:32553512-32553531 | None:intergenic | 15.0% |
| !!! | ATTTGTTAAAGAATATCAAT+AGG | + | chr4.4:32553958-32553977 | MS.gene065779:CDS | 15.0% |
| !!! | TTTTCAGATTTTCTTAATTA+GGG | + | chr4.4:32553209-32553228 | MS.gene065779:intron | 15.0% |
| !! | ATGTTATTAAAAAAGCAAGA+AGG | - | chr4.4:32553775-32553794 | None:intergenic | 20.0% |
| !! | CTAATTAAGAAAATCTGAAA+AGG | - | chr4.4:32553210-32553229 | None:intergenic | 20.0% |
| !! | TAACATACATTTAATAATGC+TGG | + | chr4.4:32553789-32553808 | MS.gene065779:intron | 20.0% |
| !!! | CTTTTCAGATTTTCTTAATT+AGG | + | chr4.4:32553208-32553227 | MS.gene065779:intron | 20.0% |
| !!! | GATGAATATTTTCTAAGAAT+TGG | + | chr4.4:32553511-32553530 | MS.gene065779:intron | 20.0% |
| !!! | TTAAGTAGTAATAGGATTTT+AGG | + | chr4.4:32553648-32553667 | MS.gene065779:intron | 20.0% |
| !!! | TTGTTGTGTTTGAAATATTT+AGG | - | chr4.4:32553137-32553156 | None:intergenic | 20.0% |
| ! | ATAACCAATTGGTAAATGTT+GGG | + | chr4.4:32554162-32554181 | MS.gene065779:CDS | 25.0% |
| ! | CAAAATCCAAAATATTGTCT+TGG | - | chr4.4:32554742-32554761 | None:intergenic | 25.0% |
| ! | GTAATTAGAGAAGTTACATT+CGG | + | chr4.4:32553396-32553415 | MS.gene065779:intron | 25.0% |
| ! | GTTCAGATCATATTAACTTA+TGG | + | chr4.4:32553252-32553271 | MS.gene065779:intron | 25.0% |
| ! | TAATTAGAGAAGTTACATTC+GGG | + | chr4.4:32553397-32553416 | MS.gene065779:intron | 25.0% |
| ! | TGTTAAAGAATATCAATAGG+CGG | + | chr4.4:32553961-32553980 | MS.gene065779:CDS | 25.0% |
| !! | AATCCTGATCAAAATTTTGT+GGG | + | chr4.4:32554800-32554819 | MS.gene065779:CDS | 25.0% |
| !! | CTTAATTGTAATTTGGTGAT+TGG | + | chr4.4:32553357-32553376 | MS.gene065779:intron | 25.0% |
| !! | TTATGGACGAAGATTTTATT+AGG | + | chr4.4:32553269-32553288 | MS.gene065779:intron | 25.0% |
| !! | TTGTATACTTTTAATCATGC+TGG | + | chr4.4:32553824-32553843 | MS.gene065779:intron | 25.0% |
| !!! | AATTCTGGGAACAATTTTTT+AGG | + | chr4.4:32554951-32554970 | MS.gene065779:CDS | 25.0% |
| !!! | AGTAATAGGATTTTAGGTTA+TGG | + | chr4.4:32553654-32553673 | MS.gene065779:intron | 25.0% |
| !!! | ATCTTTTTTATTCACAAGCA+GGG | + | chr4.4:32553870-32553889 | MS.gene065779:intron | 25.0% |
| !!! | ATTTTCTAAGAATTGGATGT+AGG | + | chr4.4:32553518-32553537 | MS.gene065779:intron | 25.0% |
| !!! | CAAGACAATATTTTGGATTT+TGG | + | chr4.4:32554740-32554759 | MS.gene065779:CDS | 25.0% |
| !!! | TATCTTTTTTATTCACAAGC+AGG | + | chr4.4:32553869-32553888 | MS.gene065779:intron | 25.0% |
| !!! | TTTTAGGTTATGGTTAAGAT+AGG | + | chr4.4:32553664-32553683 | MS.gene065779:intron | 25.0% |
| ATATTTAGGCAAGATGTGTT+TGG | - | chr4.4:32553123-32553142 | None:intergenic | 30.0% | |
| ATTAAAAAAGCAAGAAGGAG+AGG | - | chr4.4:32553770-32553789 | None:intergenic | 30.0% | |
| GAAGATTCAACAAGAAAAGA+TGG | + | chr4.4:32555063-32555082 | MS.gene065779:CDS | 30.0% | |
| GACTGCAATTAAGTAGTAAT+AGG | + | chr4.4:32553640-32553659 | MS.gene065779:intron | 30.0% | |
| GATAACCAATTGGTAAATGT+TGG | + | chr4.4:32554161-32554180 | MS.gene065779:CDS | 30.0% | |
| TAACTAATGAATCCCCAATA+GGG | - | chr4.4:32553692-32553711 | None:intergenic | 30.0% | |
| TGTTAGAACTGAATTCTACA+CGG | + | chr4.4:32553604-32553623 | MS.gene065779:intron | 30.0% | |
| ! | ATCCTGATCAAAATTTTGTG+GGG | + | chr4.4:32554801-32554820 | MS.gene065779:CDS | 30.0% |
| ! | GAATCCTGATCAAAATTTTG+TGG | + | chr4.4:32554799-32554818 | MS.gene065779:CDS | 30.0% |
| ! | TGTAAATTCTGGAAATTCAG+CGG | - | chr4.4:32554711-32554730 | None:intergenic | 30.0% |
| AACTGTTCATTTGCAACATC+TGG | - | chr4.4:32554445-32554464 | None:intergenic | 35.0% | |
| AAGAGGATTATGTGGATTCT+TGG | - | chr4.4:32554363-32554382 | None:intergenic | 35.0% | |
| AAGAGGTTGAAAGACTGAAA+AGG | + | chr4.4:32554081-32554100 | MS.gene065779:CDS | 35.0% | |
| AAGTGTTACACCAGAAACTT+GGG | - | chr4.4:32554561-32554580 | None:intergenic | 35.0% | |
| AATCCACATAATCCTCTTGA+TGG | + | chr4.4:32554365-32554384 | MS.gene065779:CDS | 35.0% | |
| AATGAAAATTCCAAGCTTCC+AGG | + | chr4.4:32554917-32554936 | MS.gene065779:CDS | 35.0% | |
| ACAATCGACTGATAACCAAT+TGG | + | chr4.4:32554151-32554170 | MS.gene065779:CDS | 35.0% | |
| ACTACTGCTATCTAATGGAA+TGG | - | chr4.4:32554531-32554550 | None:intergenic | 35.0% | |
| AGAGGTTGAAAGACTGAAAA+GGG | + | chr4.4:32554082-32554101 | MS.gene065779:CDS | 35.0% | |
| AGGAATCAACGATGAATTCT+GGG | + | chr4.4:32554937-32554956 | MS.gene065779:CDS | 35.0% | |
| ATATGGTTTGACTAAAGACC+AGG | + | chr4.4:32555024-32555043 | MS.gene065779:CDS | 35.0% | |
| CAAGATGTGTTTGGAGAAAT+CGG | - | chr4.4:32553114-32553133 | None:intergenic | 35.0% | |
| CATCAATAAGGAATGCATCA+AGG | - | chr4.4:32554496-32554515 | None:intergenic | 35.0% | |
| CATTTGCAAACTGCAAAAAG+TGG | - | chr4.4:32553586-32553605 | None:intergenic | 35.0% | |
| CTAACTAATGAATCCCCAAT+AGG | - | chr4.4:32553693-32553712 | None:intergenic | 35.0% | |
| CTATTGGTCATACAACTTAC+AGG | - | chr4.4:32554638-32554657 | None:intergenic | 35.0% | |
| CTGAAGGAACATCATCAATA+AGG | - | chr4.4:32554508-32554527 | None:intergenic | 35.0% | |
| GAACGCGCTTAATTGTAATT+TGG | + | chr4.4:32553350-32553369 | MS.gene065779:intron | 35.0% | |
| GAAGTTAAAGGTAGTTCTCT+AGG | + | chr4.4:32555001-32555020 | MS.gene065779:CDS | 35.0% | |
| GATGAACTACTGCTATCTAA+TGG | - | chr4.4:32554536-32554555 | None:intergenic | 35.0% | |
| GGTAAAGTAAGAACATACGT+AGG | - | chr4.4:32553189-32553208 | None:intergenic | 35.0% | |
| GTTAAGATAGGTACCCTATT+GGG | + | chr4.4:32553676-32553695 | MS.gene065779:intron | 35.0% | |
| TAACATTTCCAAGAGTTTCG+TGG | + | chr4.4:32553541-32553560 | MS.gene065779:intron | 35.0% | |
| TCTTTGCTAATGACAATTCC+TGG | - | chr4.4:32555045-32555064 | None:intergenic | 35.0% | |
| TTAAGATAGGTACCCTATTG+GGG | + | chr4.4:32553677-32553696 | MS.gene065779:intron | 35.0% | |
| TTTGCAGCCTCATTAATAGA+AGG | - | chr4.4:32554410-32554429 | None:intergenic | 35.0% | |
| ! | AAAGTGTTACACCAGAAACT+TGG | - | chr4.4:32554562-32554581 | None:intergenic | 35.0% |
| ! | AGCACACCAAGACAATATTT+TGG | + | chr4.4:32554733-32554752 | MS.gene065779:CDS | 35.0% |
| ! | CGCTCATGAAGGATTTTTAA+GGG | + | chr4.4:32553926-32553945 | MS.gene065779:CDS | 35.0% |
| ! | TCGCTCATGAAGGATTTTTA+AGG | + | chr4.4:32553925-32553944 | MS.gene065779:CDS | 35.0% |
| ! | TGTAATTTGGTGATTGGAGA+GGG | + | chr4.4:32553363-32553382 | MS.gene065779:intron | 35.0% |
| ! | TTGTAATTTGGTGATTGGAG+AGG | + | chr4.4:32553362-32553381 | MS.gene065779:intron | 35.0% |
| !! | AAAGGTAGTTCTCTAGGATA+TGG | + | chr4.4:32555007-32555026 | MS.gene065779:CDS | 35.0% |
| !! | GCTCATGAAGGATTTTTAAG+GGG | + | chr4.4:32553927-32553946 | MS.gene065779:CDS | 35.0% |
| !! | TGATATCAGCTGTTTTGGAT+GGG | + | chr4.4:32554855-32554874 | MS.gene065779:CDS | 35.0% |
| !! | TTGGATTTTGGTGAAGTTCA+AGG | + | chr4.4:32554752-32554771 | MS.gene065779:CDS | 35.0% |
| AACCGAATCGATCGTTTCAT+GGG | + | chr4.4:32553052-32553071 | MS.gene065779:CDS | 40.0% | |
| ACAGATGGAACTTCTTGCAT+CGG | + | chr4.4:32555117-32555136 | MS.gene065779:CDS | 40.0% | |
| ACAGTAACAGTAACACTAGC+AGG | - | chr4.4:32553462-32553481 | None:intergenic | 40.0% | |
| AGAGTCATCAACCATATCGT+AGG | - | chr4.4:32553030-32553049 | None:intergenic | 40.0% | |
| AGGATTATGTGGATTCTTGG+TGG | - | chr4.4:32554360-32554379 | None:intergenic | 40.0% | |
| AGTAATAGACATGTTACCGC+TGG | + | chr4.4:32554293-32554312 | MS.gene065779:CDS | 40.0% | |
| ATACATGACTGCCCAGAAAT+AGG | - | chr4.4:32554596-32554615 | None:intergenic | 40.0% | |
| ATGTTACCGCTGGTAAAAAG+AGG | + | chr4.4:32554303-32554322 | MS.gene065779:CDS | 40.0% | |
| ATTTCCAAGAGTTTCGTGGA+AGG | + | chr4.4:32553545-32553564 | MS.gene065779:intron | 40.0% | |
| CAAAGTCAAGATACTTGTCC+TGG | + | chr4.4:32553725-32553744 | MS.gene065779:intron | 40.0% | |
| CAGGAATCAACGATGAATTC+TGG | + | chr4.4:32554936-32554955 | MS.gene065779:CDS | 40.0% | |
| CCTAAGCAAAACCTACGATA+TGG | + | chr4.4:32553016-32553035 | MS.gene065779:CDS | 40.0% | |
| CGGAAATCTACTCATGCAAA+TGG | + | chr4.4:32553981-32554000 | MS.gene065779:CDS | 40.0% | |
| CTATCTAATGGAATGGCTGA+AGG | - | chr4.4:32554524-32554543 | None:intergenic | 40.0% | |
| GAATGCATCAAGGTTCTTGA+TGG | - | chr4.4:32554486-32554505 | None:intergenic | 40.0% | |
| GATGGATAAGATACAGCACA+TGG | + | chr4.4:32555081-32555100 | MS.gene065779:CDS | 40.0% | |
| GCAAATGAACAGTTCTGCAA+GGG | + | chr4.4:32554451-32554470 | MS.gene065779:CDS | 40.0% | |
| GGTTAAGATAGGTACCCTAT+TGG | + | chr4.4:32553675-32553694 | MS.gene065779:intron | 40.0% | |
| GTACCAGCCTTCTATTAATG+AGG | + | chr4.4:32554400-32554419 | MS.gene065779:CDS | 40.0% | |
| GTTACATTCGGGATGCATTT+CGG | + | chr4.4:32553408-32553427 | MS.gene065779:intron | 40.0% | |
| GTTCCATCTGTTGAGTAAGA+TGG | - | chr4.4:32555108-32555127 | None:intergenic | 40.0% | |
| GTTGCCCAACATTTACCAAT+TGG | - | chr4.4:32554169-32554188 | None:intergenic | 40.0% | |
| TAAGTTTGGGCTTGATGAAG+AGG | + | chr4.4:32554064-32554083 | MS.gene065779:CDS | 40.0% | |
| TATGACCAATAGCATGTCTG+AGG | + | chr4.4:32554646-32554665 | MS.gene065779:CDS | 40.0% | |
| TGCAAATGAACAGTTCTGCA+AGG | + | chr4.4:32554450-32554469 | MS.gene065779:CDS | 40.0% | |
| TTAACAACACGTCCATCAAG+AGG | - | chr4.4:32554380-32554399 | None:intergenic | 40.0% | |
| TTCTGGTGTAACACTTTCTG+AGG | + | chr4.4:32554565-32554584 | MS.gene065779:CDS | 40.0% | |
| TTGTACCTCAGACATGCTAT+TGG | - | chr4.4:32554654-32554673 | None:intergenic | 40.0% | |
| ! | CAAAATTTTGTGGGGTCTGT+CGG | + | chr4.4:32554809-32554828 | MS.gene065779:CDS | 40.0% |
| ! | CCATATCGTAGGTTTTGCTT+AGG | - | chr4.4:32553019-32553038 | None:intergenic | 40.0% |
| ! | CGGTGAGAATGATGATGAAT+TGG | + | chr4.4:32554829-32554848 | MS.gene065779:CDS | 40.0% |
| ! | GGATGTGATATCAGCTGTTT+TGG | + | chr4.4:32554850-32554869 | MS.gene065779:CDS | 40.0% |
| ! | TCGTAGGTTTTGCTTAGGAA+CGG | - | chr4.4:32553014-32553033 | None:intergenic | 40.0% |
| ! | TGCTAGTGTTACTGTTACTG+TGG | + | chr4.4:32553461-32553480 | MS.gene065779:intron | 40.0% |
| ! | TGGTGTGCTGTTGTAAATTC+TGG | - | chr4.4:32554722-32554741 | None:intergenic | 40.0% |
| ! | TTTTGGTGAAGTTCAAGGAC+TGG | + | chr4.4:32554757-32554776 | MS.gene065779:CDS | 40.0% |
| !! | CAGAATTCATCGTTGATTCC+TGG | - | chr4.4:32554938-32554957 | None:intergenic | 40.0% |
| !! | GACCCCACAAAATTTTGATC+AGG | - | chr4.4:32554806-32554825 | None:intergenic | 40.0% |
| !! | GTGATATCAGCTGTTTTGGA+TGG | + | chr4.4:32554854-32554873 | MS.gene065779:CDS | 40.0% |
| !! | TATTTCTGGGCAGTCATGTA+TGG | + | chr4.4:32554595-32554614 | MS.gene065779:CDS | 40.0% |
| !!! | TCACAAGCAGGGTTTTAGAA+AGG | + | chr4.4:32553881-32553900 | MS.gene065779:intron | 40.0% |
| AATGAACAGTTCTGCAAGGG+TGG | + | chr4.4:32554454-32554473 | MS.gene065779:CDS | 45.0% | |
| ACACAATCAGTCAACACAGC+AGG | - | chr4.4:32554683-32554702 | None:intergenic | 45.0% | |
| ACCCCATGAAACGATCGATT+CGG | - | chr4.4:32553057-32553076 | None:intergenic | 45.0% | |
| ACCGAATCGATCGTTTCATG+GGG | + | chr4.4:32553053-32553072 | MS.gene065779:CDS | 45.0% | |
| AGCAAAGGCCATGAATAGTC+CGG | + | chr4.4:32554235-32554254 | MS.gene065779:CDS | 45.0% | |
| AGTTCATCCACCCAAGTTTC+TGG | + | chr4.4:32554548-32554567 | MS.gene065779:CDS | 45.0% | |
| ATATTCATCGGTACACCGAG+CGG | - | chr4.4:32553500-32553519 | None:intergenic | 45.0% | |
| CAACCGAATCGATCGTTTCA+TGG | + | chr4.4:32553051-32553070 | MS.gene065779:CDS | 45.0% | |
| CAGCCTCATTAATAGAAGGC+TGG | - | chr4.4:32554406-32554425 | None:intergenic | 45.0% | |
| CATTCCTTCCACGAAACTCT+TGG | - | chr4.4:32553552-32553571 | None:intergenic | 45.0% | |
| CGTCCATCAAGAGGATTATG+TGG | - | chr4.4:32554371-32554390 | None:intergenic | 45.0% | |
| GAAAATTGAGCCATGAAGCC+CGG | - | chr4.4:32554257-32554276 | None:intergenic | 45.0% | |
| GACTATTCATGGCCTTTGCT+AGG | - | chr4.4:32554235-32554254 | None:intergenic | 45.0% | |
| GATGATGTCGTTCCTAGCAA+AGG | + | chr4.4:32554220-32554239 | MS.gene065779:CDS | 45.0% | |
| GATGTGTTTGGAGAAATCGG+TGG | - | chr4.4:32553111-32553130 | None:intergenic | 45.0% | |
| GGACCATCTTACTCAACAGA+TGG | + | chr4.4:32555102-32555121 | MS.gene065779:CDS | 45.0% | |
| GGAGACACAGACGAAGTTAA+AGG | + | chr4.4:32554989-32555008 | MS.gene065779:CDS | 45.0% | |
| GGTGGAATTGAAAACGACGA+AGG | - | chr4.4:32553093-32553112 | None:intergenic | 45.0% | |
| GTGTGGAAGTGGGTAAGTTT+GGG | + | chr4.4:32554051-32554070 | MS.gene065779:CDS | 45.0% | |
| GTTCAATTGTCTGACGAAGC+TGG | - | chr4.4:32553165-32553184 | None:intergenic | 45.0% | |
| TGCAAACTGCAAAAAGTGGC+TGG | - | chr4.4:32553582-32553601 | None:intergenic | 45.0% | |
| TGCATCAAGGTTCTTGATGG+AGG | - | chr4.4:32554483-32554502 | None:intergenic | 45.0% | |
| TGTGTGGAAGTGGGTAAGTT+TGG | + | chr4.4:32554050-32554069 | MS.gene065779:CDS | 45.0% | |
| TGTTACACCAGAAACTTGGG+TGG | - | chr4.4:32554558-32554577 | None:intergenic | 45.0% | |
| TTACCGCTGGTAAAAAGAGG+CGG | + | chr4.4:32554306-32554325 | MS.gene065779:CDS | 45.0% | |
| ! | CTGAGGTTCCACCTATTTCT+GGG | + | chr4.4:32554582-32554601 | MS.gene065779:CDS | 45.0% |
| ! | TAGGTTTTGCTTAGGAACGG+TGG | - | chr4.4:32553011-32553030 | None:intergenic | 45.0% |
| ! | TCTGAGGTTCCACCTATTTC+TGG | + | chr4.4:32554581-32554600 | MS.gene065779:CDS | 45.0% |
| !! | ATCGTTGATTCCTGGAAGCT+TGG | - | chr4.4:32554930-32554949 | None:intergenic | 45.0% |
| AACTATCTTCATCCTGCCCC+TGG | - | chr4.4:32554334-32554353 | None:intergenic | 50.0% | |
| ACTTCCACACATGACCCAAC+AGG | - | chr4.4:32554041-32554060 | None:intergenic | 50.0% | |
| AGATACTTGTCCTGGTGCTC+TGG | + | chr4.4:32553733-32553752 | MS.gene065779:intron | 50.0% | |
| CATGAAGCCCGGACTATTCA+TGG | - | chr4.4:32554246-32554265 | None:intergenic | 50.0% | |
| CATGAATAGTCCGGGCTTCA+TGG | + | chr4.4:32554244-32554263 | MS.gene065779:CDS | 50.0% | |
| CATGACTGCCCAGAAATAGG+TGG | - | chr4.4:32554593-32554612 | None:intergenic | 50.0% | |
| CGTCTGTGTCTCCAGTAAGT+GGG | - | chr4.4:32554982-32555001 | None:intergenic | 50.0% | |
| CTTCATGAGCGAATTCCCAG+CGG | - | chr4.4:32553917-32553936 | None:intergenic | 50.0% | |
| GCAAAGGCCATGAATAGTCC+GGG | + | chr4.4:32554236-32554255 | MS.gene065779:CDS | 50.0% | |
| GTTGGGTCATGTGTGGAAGT+GGG | + | chr4.4:32554041-32554060 | MS.gene065779:CDS | 50.0% | |
| TCGTCTGTGTCTCCAGTAAG+TGG | - | chr4.4:32554983-32555002 | None:intergenic | 50.0% | |
| TGTTGGGTCATGTGTGGAAG+TGG | + | chr4.4:32554040-32554059 | MS.gene065779:CDS | 50.0% | |
| TTTAGGCCAAGCCCACTTAC+TGG | + | chr4.4:32554968-32554987 | MS.gene065779:CDS | 50.0% | |
| TTTGGATGGGACACGGTCTT+TGG | + | chr4.4:32554868-32554887 | MS.gene065779:CDS | 50.0% | |
| ! | AAATTCAGCACCAGAGCACC+AGG | - | chr4.4:32553746-32553765 | None:intergenic | 50.0% |
| !! | CAGCTGTTTTGGATGGGACA+CGG | + | chr4.4:32554861-32554880 | MS.gene065779:CDS | 50.0% |
| ATGAGCGAATTCCCAGCGGT+CGG | - | chr4.4:32553913-32553932 | None:intergenic | 55.0% | |
| CCACACATGACCCAACAGGT+GGG | - | chr4.4:32554037-32554056 | None:intergenic | 55.0% | |
| CGCTGGGAATTCGCTCATGA+AGG | + | chr4.4:32553915-32553934 | MS.gene065779:CDS | 55.0% | |
| GGTAAAAAGAGGCGGCTCCA+GGG | + | chr4.4:32554314-32554333 | MS.gene065779:CDS | 55.0% | |
| GTAAAAAGAGGCGGCTCCAG+GGG | + | chr4.4:32554315-32554334 | MS.gene065779:CDS | 55.0% | |
| TCCACACATGACCCAACAGG+TGG | - | chr4.4:32554038-32554057 | None:intergenic | 55.0% | |
| TGGGCAACGTGTGCAAGTGA+TGG | + | chr4.4:32554181-32554200 | MS.gene065779:CDS | 55.0% | |
| TGGTAAAAAGAGGCGGCTCC+AGG | + | chr4.4:32554313-32554332 | MS.gene065779:CDS | 55.0% | |
| ! | GAGCCGCCTCTTTTTACCAG+CGG | - | chr4.4:32554312-32554331 | None:intergenic | 55.0% |
| ! | GTGTCTCCAGTAAGTGGGCT+TGG | - | chr4.4:32554977-32554996 | None:intergenic | 55.0% |
| AAAGGTTGACCCCGACCGCT+GGG | + | chr4.4:32553899-32553918 | MS.gene065779:CDS | 60.0% | |
| AAGCCGCAGAACCCACCTGT+TGG | + | chr4.4:32554023-32554042 | MS.gene065779:CDS | 60.0% | |
| AGCCGCAGAACCCACCTGTT+GGG | + | chr4.4:32554024-32554043 | MS.gene065779:CDS | 60.0% | |
| CCCACCTGTTGGGTCATGTG+TGG | + | chr4.4:32554034-32554053 | MS.gene065779:CDS | 60.0% | |
| GGTGATTGGAGAGGGAGCTG+TGG | + | chr4.4:32553371-32553390 | MS.gene065779:intron | 60.0% | |
| TGAGCGAATTCCCAGCGGTC+GGG | - | chr4.4:32553912-32553931 | None:intergenic | 60.0% | |
| ! | GACCCAACAGGTGGGTTCTG+CGG | - | chr4.4:32554029-32554048 | None:intergenic | 60.0% |
| CGGTACACCGAGCGGAAGCA+TGG | - | chr4.4:32553492-32553511 | None:intergenic | 65.0% | |
| GAAAGGTTGACCCCGACCGC+TGG | + | chr4.4:32553898-32553917 | MS.gene065779:CDS | 65.0% | |
| GAGCGAATTCCCAGCGGTCG+GGG | - | chr4.4:32553911-32553930 | None:intergenic | 65.0% | |
| ! | GGTGCTGCCATGCTTCCGCT+CGG | + | chr4.4:32553482-32553501 | MS.gene065779:intron | 65.0% |
| AAAGAGGCGGCTCCAGGGGC+AGG | + | chr4.4:32554319-32554338 | MS.gene065779:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 32552978 | 32555159 | 32552978 | ID=MS.gene065779 |
| chr4.4 | mRNA | 32552978 | 32555159 | 32552978 | ID=MS.gene065779.t1;Parent=MS.gene065779 |
| chr4.4 | exon | 32552978 | 32553190 | 32552978 | ID=MS.gene065779.t1.exon1;Parent=MS.gene065779.t1 |
| chr4.4 | CDS | 32552978 | 32553190 | 32552978 | ID=cds.MS.gene065779.t1;Parent=MS.gene065779.t1 |
| chr4.4 | exon | 32553891 | 32555159 | 32553891 | ID=MS.gene065779.t1.exon2;Parent=MS.gene065779.t1 |
| chr4.4 | CDS | 32553891 | 32555159 | 32553891 | ID=cds.MS.gene065779.t1;Parent=MS.gene065779.t1 |
| Gene Sequence |
| Protein sequence |
