Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065883.t1 | XP_003607414.2 | 93.9 | 557 | 32 | 1 | 1 | 557 | 1 | 555 | 8.70E-268 | 932.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065883.t1 | A0A024B7I0 | 56.9 | 603 | 199 | 16 | 1 | 557 | 1 | 588 | 1.9e-146 | 520.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065883.t1 | G7JSQ4 | 93.9 | 557 | 32 | 1 | 1 | 557 | 1 | 555 | 6.3e-268 | 932.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene065883.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065883.t1 | MTR_4g077760 | 97.127 | 557 | 14 | 1 | 1 | 557 | 1 | 555 | 0.0 | 1107 |
MS.gene065883.t1 | MTR_2g082090 | 37.892 | 351 | 193 | 11 | 221 | 556 | 238 | 578 | 2.88e-53 | 191 |
MS.gene065883.t1 | MTR_3g056110 | 35.593 | 354 | 211 | 10 | 215 | 557 | 195 | 542 | 5.92e-53 | 189 |
MS.gene065883.t1 | MTR_5g094450 | 34.026 | 385 | 233 | 9 | 188 | 557 | 154 | 532 | 1.27e-52 | 187 |
MS.gene065883.t1 | MTR_3g065980 | 34.884 | 387 | 216 | 12 | 192 | 557 | 169 | 540 | 2.50e-52 | 187 |
MS.gene065883.t1 | MTR_7g074650 | 34.060 | 367 | 220 | 10 | 198 | 557 | 441 | 792 | 5.92e-52 | 190 |
MS.gene065883.t1 | MTR_7g027190 | 31.529 | 425 | 235 | 11 | 158 | 557 | 280 | 673 | 1.02e-51 | 188 |
MS.gene065883.t1 | MTR_3g089055 | 31.383 | 376 | 235 | 8 | 196 | 557 | 204 | 570 | 5.05e-50 | 181 |
MS.gene065883.t1 | MTR_3g089055 | 31.383 | 376 | 235 | 8 | 196 | 557 | 199 | 565 | 6.24e-50 | 181 |
MS.gene065883.t1 | MTR_1g069725 | 33.871 | 372 | 224 | 10 | 192 | 556 | 106 | 462 | 1.35e-49 | 178 |
MS.gene065883.t1 | MTR_5g097480 | 33.684 | 380 | 237 | 9 | 188 | 557 | 170 | 544 | 3.11e-49 | 179 |
MS.gene065883.t1 | MTR_1g029420 | 31.183 | 372 | 241 | 7 | 196 | 557 | 226 | 592 | 4.19e-49 | 179 |
MS.gene065883.t1 | MTR_3g072710 | 31.536 | 371 | 232 | 7 | 205 | 556 | 132 | 499 | 3.25e-44 | 164 |
MS.gene065883.t1 | MTR_4g102790 | 30.287 | 383 | 239 | 12 | 192 | 556 | 289 | 661 | 5.54e-44 | 166 |
MS.gene065883.t1 | MTR_4g076020 | 31.944 | 360 | 203 | 12 | 209 | 557 | 101 | 429 | 6.24e-44 | 162 |
MS.gene065883.t1 | MTR_4g104020 | 27.792 | 385 | 249 | 7 | 192 | 557 | 146 | 520 | 2.13e-43 | 162 |
MS.gene065883.t1 | MTR_4g133660 | 32.286 | 350 | 220 | 9 | 218 | 556 | 199 | 542 | 3.93e-43 | 162 |
MS.gene065883.t1 | MTR_1g096030 | 31.392 | 395 | 232 | 11 | 191 | 557 | 76 | 459 | 3.21e-42 | 157 |
MS.gene065883.t1 | MTR_2g026250 | 30.571 | 350 | 228 | 8 | 218 | 557 | 252 | 596 | 3.94e-40 | 154 |
MS.gene065883.t1 | MTR_4g097080 | 28.974 | 390 | 251 | 10 | 183 | 557 | 125 | 503 | 9.09e-40 | 152 |
MS.gene065883.t1 | MTR_5g058860 | 31.232 | 349 | 223 | 6 | 223 | 556 | 150 | 496 | 1.50e-38 | 148 |
MS.gene065883.t1 | MTR_3g022830 | 28.009 | 432 | 239 | 13 | 186 | 557 | 17 | 436 | 4.01e-38 | 145 |
MS.gene065883.t1 | MTR_2g097310 | 28.684 | 380 | 244 | 10 | 193 | 556 | 269 | 637 | 2.18e-37 | 147 |
MS.gene065883.t1 | MTR_4g064200 | 27.937 | 383 | 254 | 9 | 187 | 556 | 276 | 649 | 7.69e-37 | 145 |
MS.gene065883.t1 | MTR_2g097410 | 26.772 | 381 | 254 | 10 | 193 | 556 | 368 | 740 | 1.68e-36 | 145 |
MS.gene065883.t1 | MTR_4g064160 | 29.024 | 379 | 247 | 9 | 192 | 556 | 313 | 683 | 2.03e-36 | 144 |
MS.gene065883.t1 | MTR_8g442410 | 28.571 | 385 | 245 | 10 | 192 | 557 | 152 | 525 | 6.02e-36 | 141 |
MS.gene065883.t1 | MTR_4g064150 | 27.473 | 364 | 238 | 9 | 211 | 556 | 377 | 732 | 6.95e-36 | 143 |
MS.gene065883.t1 | MTR_2g097350 | 28.421 | 380 | 245 | 10 | 193 | 556 | 271 | 639 | 8.76e-36 | 142 |
MS.gene065883.t1 | MTR_5g015490 | 29.771 | 393 | 240 | 13 | 188 | 557 | 111 | 490 | 1.94e-35 | 139 |
MS.gene065883.t1 | MTR_2g097390 | 28.684 | 380 | 244 | 10 | 193 | 556 | 272 | 640 | 2.08e-35 | 141 |
MS.gene065883.t1 | MTR_5g009080 | 25.688 | 436 | 244 | 9 | 192 | 557 | 53 | 478 | 2.42e-35 | 139 |
MS.gene065883.t1 | MTR_2g034250 | 27.062 | 388 | 252 | 11 | 192 | 557 | 207 | 585 | 1.05e-34 | 138 |
MS.gene065883.t1 | MTR_8g093070 | 30.730 | 397 | 245 | 15 | 172 | 556 | 117 | 495 | 1.78e-34 | 137 |
MS.gene065883.t1 | MTR_2g097467 | 25.729 | 377 | 259 | 7 | 192 | 556 | 286 | 653 | 2.31e-34 | 138 |
MS.gene065883.t1 | MTR_4g076140 | 26.545 | 437 | 238 | 12 | 192 | 557 | 45 | 469 | 3.05e-34 | 135 |
MS.gene065883.t1 | MTR_4g064120 | 25.693 | 397 | 277 | 8 | 164 | 546 | 223 | 615 | 3.33e-34 | 137 |
MS.gene065883.t1 | MTR_2g034280 | 26.579 | 380 | 261 | 8 | 192 | 557 | 200 | 575 | 3.64e-34 | 137 |
MS.gene065883.t1 | MTR_2g034260 | 26.562 | 384 | 258 | 10 | 192 | 557 | 207 | 584 | 3.74e-34 | 137 |
MS.gene065883.t1 | MTR_2g097463 | 25.381 | 394 | 271 | 8 | 176 | 556 | 271 | 654 | 3.81e-34 | 137 |
MS.gene065883.t1 | MTR_4g064180 | 27.714 | 350 | 235 | 8 | 211 | 546 | 270 | 615 | 1.21e-33 | 135 |
MS.gene065883.t1 | MTR_4g026485 | 29.639 | 415 | 240 | 16 | 165 | 557 | 240 | 624 | 7.01e-33 | 133 |
MS.gene065883.t1 | MTR_2g097473 | 25.729 | 377 | 259 | 7 | 192 | 556 | 286 | 653 | 8.37e-33 | 133 |
MS.gene065883.t1 | MTR_7g062120 | 26.836 | 354 | 241 | 8 | 218 | 557 | 391 | 740 | 1.34e-32 | 133 |
MS.gene065883.t1 | MTR_7g109580 | 29.076 | 368 | 244 | 10 | 200 | 557 | 194 | 554 | 2.80e-32 | 131 |
MS.gene065883.t1 | MTR_0092s0100 | 30.667 | 375 | 236 | 12 | 192 | 557 | 369 | 728 | 7.14e-31 | 128 |
MS.gene065883.t1 | MTR_0092s0100 | 30.667 | 375 | 236 | 12 | 192 | 557 | 372 | 731 | 7.33e-31 | 128 |
MS.gene065883.t1 | MTR_2g097380 | 27.019 | 359 | 211 | 10 | 211 | 556 | 240 | 560 | 9.50e-31 | 126 |
MS.gene065883.t1 | MTR_2g099110 | 27.735 | 393 | 241 | 11 | 194 | 557 | 73 | 451 | 9.45e-29 | 119 |
MS.gene065883.t1 | MTR_2g089100 | 26.316 | 399 | 251 | 13 | 194 | 556 | 51 | 442 | 9.36e-26 | 110 |
MS.gene065883.t1 | MTR_5g015950 | 24.429 | 438 | 263 | 13 | 182 | 556 | 13 | 445 | 3.75e-23 | 102 |
MS.gene065883.t1 | MTR_3g053270 | 24.429 | 438 | 263 | 13 | 182 | 556 | 13 | 445 | 3.75e-23 | 102 |
MS.gene065883.t1 | MTR_7g057230 | 29.017 | 417 | 256 | 16 | 160 | 556 | 260 | 656 | 4.14e-23 | 103 |
MS.gene065883.t1 | MTR_4g095500 | 23.673 | 452 | 276 | 14 | 159 | 556 | 31 | 467 | 8.55e-20 | 92.8 |
MS.gene065883.t1 | MTR_1g086970 | 21.978 | 364 | 246 | 12 | 217 | 557 | 130 | 478 | 4.72e-19 | 90.5 |
MS.gene065883.t1 | MTR_8g020840 | 25.260 | 384 | 258 | 10 | 196 | 557 | 172 | 548 | 7.63e-19 | 90.5 |
MS.gene065883.t1 | MTR_8g077940 | 25.770 | 357 | 217 | 13 | 223 | 557 | 211 | 541 | 6.14e-16 | 81.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene065883.t1 | AT5G66770 | 54.023 | 609 | 203 | 13 | 1 | 557 | 1 | 584 | 0.0 | 538 |
MS.gene065883.t1 | AT3G50650 | 49.915 | 585 | 222 | 14 | 1 | 557 | 1 | 542 | 2.69e-162 | 473 |
MS.gene065883.t1 | AT5G41920 | 32.843 | 408 | 233 | 12 | 168 | 557 | 16 | 400 | 7.95e-55 | 191 |
MS.gene065883.t1 | AT5G48150 | 34.383 | 381 | 234 | 9 | 188 | 557 | 115 | 490 | 5.88e-53 | 187 |
MS.gene065883.t1 | AT5G48150 | 34.383 | 381 | 234 | 9 | 188 | 557 | 115 | 490 | 5.88e-53 | 187 |
MS.gene065883.t1 | AT5G48150 | 34.383 | 381 | 234 | 9 | 188 | 557 | 115 | 490 | 5.88e-53 | 187 |
MS.gene065883.t1 | AT5G48150 | 34.383 | 381 | 234 | 9 | 188 | 557 | 115 | 490 | 5.88e-53 | 187 |
MS.gene065883.t1 | AT3G03450 | 31.410 | 468 | 279 | 18 | 117 | 557 | 93 | 545 | 1.02e-52 | 188 |
MS.gene065883.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 188 | 557 | 152 | 526 | 1.44e-52 | 187 |
MS.gene065883.t1 | AT3G54220 | 33.784 | 370 | 218 | 11 | 198 | 556 | 296 | 649 | 5.13e-52 | 188 |
MS.gene065883.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 188 | 557 | 223 | 597 | 5.25e-52 | 187 |
MS.gene065883.t1 | AT1G50600 | 34.211 | 380 | 235 | 8 | 188 | 557 | 227 | 601 | 7.34e-52 | 187 |
MS.gene065883.t1 | AT2G04890 | 34.085 | 355 | 210 | 12 | 214 | 557 | 72 | 413 | 4.94e-49 | 175 |
MS.gene065883.t1 | AT5G17490 | 32.061 | 393 | 244 | 12 | 175 | 557 | 137 | 516 | 9.57e-46 | 169 |
MS.gene065883.t1 | AT1G66350 | 29.149 | 470 | 276 | 16 | 110 | 557 | 72 | 506 | 6.36e-45 | 166 |
MS.gene065883.t1 | AT1G21450 | 28.250 | 400 | 272 | 8 | 168 | 557 | 199 | 593 | 7.90e-45 | 167 |
MS.gene065883.t1 | AT1G63100 | 31.776 | 321 | 184 | 8 | 258 | 556 | 321 | 628 | 4.98e-43 | 163 |
MS.gene065883.t1 | AT1G63100 | 31.949 | 313 | 178 | 8 | 266 | 556 | 354 | 653 | 5.37e-43 | 163 |
MS.gene065883.t1 | AT4G17230 | 31.649 | 376 | 242 | 8 | 192 | 557 | 155 | 525 | 4.37e-42 | 159 |
MS.gene065883.t1 | AT4G17230 | 31.649 | 376 | 242 | 8 | 192 | 557 | 155 | 525 | 4.37e-42 | 159 |
MS.gene065883.t1 | AT2G01570 | 33.141 | 347 | 206 | 14 | 221 | 557 | 251 | 581 | 1.15e-41 | 158 |
MS.gene065883.t1 | AT1G55580 | 31.579 | 380 | 205 | 9 | 225 | 557 | 74 | 445 | 3.42e-41 | 154 |
MS.gene065883.t1 | AT1G14920 | 31.232 | 349 | 210 | 12 | 221 | 557 | 199 | 529 | 2.60e-40 | 154 |
MS.gene065883.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 196 | 557 | 5 | 371 | 1.58e-39 | 148 |
MS.gene065883.t1 | AT4G08250 | 26.707 | 498 | 328 | 12 | 74 | 556 | 1 | 476 | 1.06e-38 | 148 |
MS.gene065883.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 196 | 557 | 213 | 579 | 1.36e-38 | 149 |
MS.gene065883.t1 | AT3G46600 | 27.763 | 371 | 255 | 7 | 196 | 557 | 181 | 547 | 2.04e-38 | 149 |
MS.gene065883.t1 | AT4G37650 | 29.101 | 378 | 238 | 11 | 204 | 557 | 158 | 529 | 8.68e-38 | 146 |
MS.gene065883.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 196 | 556 | 319 | 692 | 8.92e-38 | 148 |
MS.gene065883.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 196 | 556 | 320 | 693 | 9.40e-38 | 148 |
MS.gene065883.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 196 | 556 | 155 | 528 | 1.01e-37 | 146 |
MS.gene065883.t1 | AT1G07520 | 28.382 | 377 | 251 | 7 | 196 | 556 | 155 | 528 | 1.01e-37 | 146 |
MS.gene065883.t1 | AT5G59450 | 26.551 | 403 | 278 | 8 | 169 | 557 | 200 | 598 | 1.05e-37 | 147 |
MS.gene065883.t1 | AT1G07530 | 26.633 | 398 | 270 | 9 | 173 | 556 | 375 | 764 | 1.86e-36 | 145 |
MS.gene065883.t1 | AT2G29065 | 27.763 | 389 | 239 | 10 | 196 | 556 | 253 | 627 | 9.36e-36 | 142 |
MS.gene065883.t1 | AT2G29060 | 24.524 | 420 | 300 | 9 | 150 | 556 | 276 | 691 | 3.14e-35 | 141 |
MS.gene065883.t1 | AT2G29060 | 24.524 | 420 | 300 | 9 | 150 | 556 | 239 | 654 | 4.01e-35 | 140 |
MS.gene065883.t1 | AT2G37650 | 25.217 | 345 | 236 | 7 | 226 | 557 | 366 | 701 | 5.19e-28 | 119 |
MS.gene065883.t1 | AT2G37650 | 25.217 | 345 | 236 | 7 | 226 | 557 | 378 | 713 | 5.24e-28 | 119 |
MS.gene065883.t1 | AT5G52510 | 26.615 | 387 | 248 | 12 | 194 | 557 | 267 | 640 | 2.45e-26 | 114 |
MS.gene065883.t1 | AT4G00150 | 28.302 | 371 | 219 | 14 | 207 | 557 | 211 | 554 | 6.63e-26 | 112 |
MS.gene065883.t1 | AT1G50420 | 31.278 | 227 | 139 | 5 | 206 | 426 | 71 | 286 | 6.78e-24 | 105 |
MS.gene065883.t1 | AT1G50420 | 32.414 | 145 | 90 | 3 | 418 | 557 | 338 | 479 | 6.68e-15 | 77.8 |
MS.gene065883.t1 | AT2G45160 | 28.070 | 399 | 227 | 16 | 192 | 557 | 268 | 639 | 1.14e-23 | 105 |
MS.gene065883.t1 | AT3G60630 | 28.488 | 344 | 220 | 9 | 228 | 557 | 291 | 622 | 1.74e-23 | 105 |
MS.gene065883.t1 | AT3G49950 | 27.171 | 357 | 226 | 12 | 225 | 556 | 60 | 407 | 1.22e-22 | 100 |
MS.gene065883.t1 | AT3G13840 | 25.722 | 381 | 249 | 9 | 194 | 557 | 147 | 510 | 7.24e-21 | 96.7 |
MS.gene065883.t1 | AT4G36710 | 23.947 | 380 | 259 | 12 | 192 | 557 | 122 | 485 | 4.10e-17 | 84.7 |
Find 125 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAATAGTGTAAGAATTTC+TGG | 0.119456 | 4.2:+32080190 | MS.gene065883:CDS |
GATATTCATATAGTTGATTT+TGG | 0.147557 | 4.2:+32080103 | MS.gene065883:CDS |
CTCTATTGACTGTTTCTTCT+TGG | 0.170351 | 4.2:+32080860 | MS.gene065883:CDS |
CCAGAAATTCTTACACTATT+AGG | 0.205458 | 4.2:-32080190 | None:intergenic |
ATATGGGCATGCATCGTTTA+AGG | 0.214693 | 4.2:-32080020 | None:intergenic |
GCTTCAGTTGTATAATCTTT+TGG | 0.233520 | 4.2:+32080399 | MS.gene065883:CDS |
TAAAAGGAAACTCTTTGATT+AGG | 0.234171 | 4.2:-32079896 | None:intergenic |
GGTATACCTGCTATGGCTTT+AGG | 0.252034 | 4.2:+32080211 | MS.gene065883:CDS |
TCACCTAAAGTAACAATCTT+AGG | 0.256338 | 4.2:-32080475 | None:intergenic |
AAATGTGCGAACTTTGAATA+TGG | 0.257358 | 4.2:-32080037 | None:intergenic |
TGGGTGGTTGGATTGGGATT+TGG | 0.269914 | 4.2:-32079697 | None:intergenic |
AAAAGGAAACTCTTTGATTA+GGG | 0.285344 | 4.2:-32079895 | None:intergenic |
AATCCTAAGATTGTTACTTT+AGG | 0.287104 | 4.2:+32080472 | MS.gene065883:CDS |
AGGGTTTCAATTGCTTGATT+TGG | 0.313945 | 4.2:-32079836 | None:intergenic |
TAAGGCTTGTGAAAAGTAAA+AGG | 0.314801 | 4.2:-32079912 | None:intergenic |
TTCGATGAGTGAAGCAATTT+CGG | 0.323142 | 4.2:-32079804 | None:intergenic |
CTTGTTGAGCTATTGCCATT+AGG | 0.345192 | 4.2:-32079244 | None:intergenic |
TGCGGAGTGGGTGGTTGGAT+TGG | 0.345602 | 4.2:-32079704 | None:intergenic |
GCGGAGTGGGTGGTTGGATT+GGG | 0.350584 | 4.2:-32079703 | None:intergenic |
TTGATTTGCTGAGATGGGTT+AGG | 0.352847 | 4.2:-32079856 | None:intergenic |
TTGTGATACCTAGGATGTTT+TGG | 0.353661 | 4.2:-32079331 | None:intergenic |
GCATTTGCAACTCGTTCTTC+TGG | 0.357528 | 4.2:+32080163 | MS.gene065883:CDS |
TTAACAGCTAAAGCCTCATT+TGG | 0.363944 | 4.2:-32080370 | None:intergenic |
TTGAAATGGGTCGGTGAAAT+CGG | 0.367983 | 4.2:-32079450 | None:intergenic |
GGACCCGACCCGACTTGAAA+TGG | 0.372343 | 4.2:-32079464 | None:intergenic |
GACCCGACTTTCGCCGCAAC+CGG | 0.383498 | 4.2:+32079646 | MS.gene065883:CDS |
CCAGTCATCGGAGTCGAAAT+CGG | 0.397137 | 4.2:-32079555 | None:intergenic |
TAGTTCTTTGTATTCTCTTG+TGG | 0.398410 | 4.2:+32080795 | MS.gene065883:CDS |
CCGATTTCGACTCCGATGAC+TGG | 0.399290 | 4.2:+32079555 | MS.gene065883:CDS |
TGATTTGCTGAGATGGGTTA+GGG | 0.400674 | 4.2:-32079855 | None:intergenic |
CAAATTCTTCTTCTACTACA+TGG | 0.403280 | 4.2:+32079972 | MS.gene065883:CDS |
ATTTGGAGTGGCACGGTGGC+GGG | 0.405277 | 4.2:-32079680 | None:intergenic |
TGAAAACGACGATGTCGTTT+CGG | 0.406416 | 4.2:-32079750 | None:intergenic |
TTGCTTGGTAGGAGAATTGA+TGG | 0.408569 | 4.2:+32080637 | MS.gene065883:CDS |
TGAGTGAAGCAATTTCGGTT+AGG | 0.410733 | 4.2:-32079799 | None:intergenic |
GAGTGAAGCAATTTCGGTTA+GGG | 0.413751 | 4.2:-32079798 | None:intergenic |
GAATTGTTCAAGGGATTCAA+TGG | 0.414040 | 4.2:+32080125 | MS.gene065883:CDS |
ATCCGGTTGCGGCGAAAGTC+GGG | 0.417122 | 4.2:-32079648 | None:intergenic |
GATTTGGAGTGGCACGGTGG+CGG | 0.424354 | 4.2:-32079681 | None:intergenic |
AGTGATGAAGAAGAAGATAC+TGG | 0.431284 | 4.2:-32079404 | None:intergenic |
GATTCATCAAGAAGCTCAAT+AGG | 0.436690 | 4.2:-32080331 | None:intergenic |
GTGAAATTGATTTGCTGAGA+TGG | 0.442057 | 4.2:-32079862 | None:intergenic |
GGCGAATCCAACGCCATGTT+CGG | 0.446437 | 4.2:-32080589 | None:intergenic |
TTTGGTGATGATGATGTTGT+TGG | 0.448206 | 4.2:-32079313 | None:intergenic |
GTTGTCGGCGGCGGACATTA+AGG | 0.450739 | 4.2:-32079585 | None:intergenic |
AAACTCAGATAAACGATTAC+CGG | 0.454956 | 4.2:-32080263 | None:intergenic |
TCACCGACCCATTTCAAGTC+GGG | 0.456993 | 4.2:+32079456 | MS.gene065883:CDS |
TTCGTTGCGGAGTGGGTGGT+TGG | 0.460150 | 4.2:-32079709 | None:intergenic |
ATCGGAGTGGTTGTCGGCGG+CGG | 0.468764 | 4.2:-32079594 | None:intergenic |
GTGTGATTGGTGTGAGGGAG+AGG | 0.470960 | 4.2:+32080659 | MS.gene065883:CDS |
GTAGCTGAAATCGATGAAAC+TGG | 0.471542 | 4.2:-32080241 | None:intergenic |
AATTTCTGGTATACCTGCTA+TGG | 0.471549 | 4.2:+32080204 | MS.gene065883:CDS |
GATTGGTGTGAGGGAGAGGA+TGG | 0.472918 | 4.2:+32080663 | MS.gene065883:CDS |
AATGTGCGAACTTTGAATAT+GGG | 0.473696 | 4.2:-32080036 | None:intergenic |
GACCCATTTCAAGTCGGGTC+GGG | 0.475045 | 4.2:+32079461 | MS.gene065883:CDS |
AGCAAATCAATTTCACAAAA+CGG | 0.480108 | 4.2:+32079869 | MS.gene065883:CDS |
ATCAACTATATGAATATCGT+TGG | 0.482770 | 4.2:-32080098 | None:intergenic |
GTTGCGGCGAAAGTCGGGTC+GGG | 0.485945 | 4.2:-32079643 | None:intergenic |
CTCTCCACTTGAAACCTCTC+TGG | 0.491073 | 4.2:-32080610 | None:intergenic |
ATGGAAATCGGAGTGGTTGT+CGG | 0.492567 | 4.2:-32079600 | None:intergenic |
AAATTCTTCTTCTACTACAT+GGG | 0.496572 | 4.2:+32079973 | MS.gene065883:CDS |
CGGGTCGGGCATGATGAAAA+CGG | 0.497777 | 4.2:-32079629 | None:intergenic |
GATCCGGTTGCGGCGAAAGT+CGG | 0.502966 | 4.2:-32079649 | None:intergenic |
TGAAATTGATTTGCTGAGAT+GGG | 0.503445 | 4.2:-32079861 | None:intergenic |
AGGAGAATTGATGGTGTGAT+TGG | 0.505945 | 4.2:+32080646 | MS.gene065883:CDS |
GACCCGACCCGACTTGAAAT+GGG | 0.507947 | 4.2:-32079463 | None:intergenic |
GAGTGAGGGTCGAGTGGTGA+AGG | 0.509192 | 4.2:-32079515 | None:intergenic |
AAACGGGTTGAGATGGAAAT+CGG | 0.511523 | 4.2:-32079612 | None:intergenic |
CACTGACAGTGGAAACCTAA+TGG | 0.513258 | 4.2:+32079229 | MS.gene065883:CDS |
GGGTCGGGCATGATGAAAAC+GGG | 0.514429 | 4.2:-32079628 | None:intergenic |
TTTGGAGCCGAACATGGCGT+TGG | 0.516288 | 4.2:+32080582 | MS.gene065883:CDS |
CGGAGTCGAAATCGGAGAAA+CGG | 0.521347 | 4.2:-32079547 | None:intergenic |
CATCATCACCAAAACATCCT+AGG | 0.524123 | 4.2:+32079323 | MS.gene065883:CDS |
GGTTGGATTGGGATTTGGAG+TGG | 0.534821 | 4.2:-32079692 | None:intergenic |
AATTGTTCAAGGGATTCAAT+GGG | 0.536168 | 4.2:+32080126 | MS.gene065883:CDS |
AGCTCAATAGGCGTAAGAAT+CGG | 0.539095 | 4.2:-32080319 | None:intergenic |
TGAAGCTAGTTTGACGACTC+GGG | 0.539102 | 4.2:+32080501 | MS.gene065883:CDS |
ATGAAGCTAGTTTGACGACT+CGG | 0.543619 | 4.2:+32080500 | MS.gene065883:CDS |
CGATGTCGTTTCGGTGGTGT+TGG | 0.543827 | 4.2:-32079741 | None:intergenic |
TTTCGACTCCGATGACTGGA+TGG | 0.549581 | 4.2:+32079559 | MS.gene065883:CDS |
CAAGAAGAAACAGTCAATAG+AGG | 0.549819 | 4.2:-32080859 | None:intergenic |
TGAGAGTTTGGAGCCGAACA+TGG | 0.552448 | 4.2:+32080576 | MS.gene065883:CDS |
GTGGCGGGTAGGAGAAGATC+CGG | 0.554130 | 4.2:-32079665 | None:intergenic |
GCTAGTTTGACGACTCGGGT+TGG | 0.562442 | 4.2:+32080505 | MS.gene065883:CDS |
CGACCCATTTCAAGTCGGGT+CGG | 0.565104 | 4.2:+32079460 | MS.gene065883:CDS |
TAAGGTATCCATCCAGTCAT+CGG | 0.565279 | 4.2:-32079567 | None:intergenic |
GTTTCATCGATTTCAGCTAC+CGG | 0.566724 | 4.2:+32080244 | MS.gene065883:CDS |
GAAGTTCCTAAAGCCATAGC+AGG | 0.567270 | 4.2:-32080217 | None:intergenic |
TCTCTGTCTCACTACATCCA+TGG | 0.569966 | 4.2:+32079360 | MS.gene065883:CDS |
GGAGTGGCACGGTGGCGGGT+AGG | 0.573432 | 4.2:-32079676 | None:intergenic |
AAACGGAAGGTGGTTGAGTG+AGG | 0.573544 | 4.2:-32079530 | None:intergenic |
GGATGGAGGATAAAGAACAG+TGG | 0.578860 | 4.2:+32080680 | MS.gene065883:CDS |
GGTGAAGGAAAGTTGAAAGC+GGG | 0.586484 | 4.2:-32079500 | None:intergenic |
TTCGCCAGAGAGGTTTCAAG+TGG | 0.588796 | 4.2:+32080606 | MS.gene065883:CDS |
AGGAAAGTTGAAAGCGGGAT+CGG | 0.590312 | 4.2:-32079495 | None:intergenic |
AGAGAGGGTTTGTGATACCT+AGG | 0.592419 | 4.2:-32079340 | None:intergenic |
GATTGGGATTTGGAGTGGCA+CGG | 0.594042 | 4.2:-32079687 | None:intergenic |
ATGATGAAAACGGGTTGAGA+TGG | 0.594967 | 4.2:-32079619 | None:intergenic |
GGAGGATAAAGAACAGTGGA+AGG | 0.599058 | 4.2:+32080684 | MS.gene065883:CDS |
TGGTGTGAGGGAGAGGATGG+AGG | 0.600379 | 4.2:+32080666 | MS.gene065883:CDS |
GGATGTAGTGAGACAGAGAG+AGG | 0.601119 | 4.2:-32079356 | None:intergenic |
TTCACCGACCCATTTCAAGT+CGG | 0.604924 | 4.2:+32079455 | MS.gene065883:CDS |
TGATGGTGTGATTGGTGTGA+GGG | 0.605734 | 4.2:+32080654 | MS.gene065883:CDS |
GGTTGCGGCGAAAGTCGGGT+CGG | 0.606467 | 4.2:-32079644 | None:intergenic |
AACGGAAGGTGGTTGAGTGA+GGG | 0.606602 | 4.2:-32079529 | None:intergenic |
GTGGTTGAGTGAGGGTCGAG+TGG | 0.609203 | 4.2:-32079521 | None:intergenic |
GTCAAGCTAAGATATTGTTG+TGG | 0.613839 | 4.2:+32080761 | MS.gene065883:CDS |
AATGGGTCGGTGAAATCGGT+AGG | 0.625917 | 4.2:-32079446 | None:intergenic |
GCGATTCTTGAAGCAACAGA+AGG | 0.626009 | 4.2:+32080073 | MS.gene065883:CDS |
GATGTAGTGAGACAGAGAGA+GGG | 0.639502 | 4.2:-32079355 | None:intergenic |
GGTAGGAGAAGATCCGGTTG+CGG | 0.644273 | 4.2:-32079659 | None:intergenic |
GGGTCGGTGAAATCGGTAGG+TGG | 0.649301 | 4.2:-32079443 | None:intergenic |
GTCGAAATCGGAGAAACGGA+AGG | 0.650056 | 4.2:-32079543 | None:intergenic |
GAAATCGGAGTGGTTGTCGG+CGG | 0.651663 | 4.2:-32079597 | None:intergenic |
GCTTACATGTGCACTGACAG+TGG | 0.657212 | 4.2:+32079218 | MS.gene065883:CDS |
GAAATCGGAGAAACGGAAGG+TGG | 0.658200 | 4.2:-32079540 | None:intergenic |
TTGATGGTGTGATTGGTGTG+AGG | 0.659575 | 4.2:+32080653 | MS.gene065883:CDS |
CGACCCGACTTGAAATGGGT+CGG | 0.673110 | 4.2:-32079459 | None:intergenic |
TCGGTAGGTGGAAAAGACAA+AGG | 0.681946 | 4.2:-32079431 | None:intergenic |
TGGGATTTGGAGTGGCACGG+TGG | 0.682217 | 4.2:-32079684 | None:intergenic |
TGGTGAAGGAAAGTTGAAAG+CGG | 0.682780 | 4.2:-32079501 | None:intergenic |
TGGCGTTGGATTCGCCAGAG+AGG | 0.687403 | 4.2:+32080596 | MS.gene065883:CDS |
AAACGACGATGTCGTTTCGG+TGG | 0.687537 | 4.2:-32079747 | None:intergenic |
GTAGGTGGAAAAGACAAAGG+TGG | 0.720227 | 4.2:-32079428 | None:intergenic |
GGTTGAGATGGAAATCGGAG+TGG | 0.720412 | 4.2:-32079607 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATATTCATATAGTTGATTT+TGG | + | chr4.2:32080103-32080122 | MS.gene065883:CDS | 20.0% |
! | AAAAGGAAACTCTTTGATTA+GGG | - | chr4.2:32079898-32079917 | None:intergenic | 25.0% |
! | AAATTCTTCTTCTACTACAT+GGG | + | chr4.2:32079973-32079992 | MS.gene065883:CDS | 25.0% |
! | AGCAAATCAATTTCACAAAA+CGG | + | chr4.2:32079869-32079888 | MS.gene065883:CDS | 25.0% |
! | ATCAACTATATGAATATCGT+TGG | - | chr4.2:32080101-32080120 | None:intergenic | 25.0% |
! | TAAAAGGAAACTCTTTGATT+AGG | - | chr4.2:32079899-32079918 | None:intergenic | 25.0% |
!!! | AATCCTAAGATTGTTACTTT+AGG | + | chr4.2:32080472-32080491 | MS.gene065883:CDS | 25.0% |
!!! | AATTGCTTGATTTGGTTTTT+GGG | - | chr4.2:32079831-32079850 | None:intergenic | 25.0% |
!!! | TTGATTTTGGAATTGTTCAA+GGG | + | chr4.2:32080116-32080135 | MS.gene065883:CDS | 25.0% |
AAACTCAGATAAACGATTAC+CGG | - | chr4.2:32080266-32080285 | None:intergenic | 30.0% | |
AAATGTGCGAACTTTGAATA+TGG | - | chr4.2:32080040-32080059 | None:intergenic | 30.0% | |
AATGTGCGAACTTTGAATAT+GGG | - | chr4.2:32080039-32080058 | None:intergenic | 30.0% | |
AATTGTTCAAGGGATTCAAT+GGG | + | chr4.2:32080126-32080145 | MS.gene065883:CDS | 30.0% | |
CAAATTCTTCTTCTACTACA+TGG | + | chr4.2:32079972-32079991 | MS.gene065883:CDS | 30.0% | |
CCAGAAATTCTTACACTATT+AGG | - | chr4.2:32080193-32080212 | None:intergenic | 30.0% | |
CCTAATAGTGTAAGAATTTC+TGG | + | chr4.2:32080190-32080209 | MS.gene065883:CDS | 30.0% | |
TAAGGCTTGTGAAAAGTAAA+AGG | - | chr4.2:32079915-32079934 | None:intergenic | 30.0% | |
TAGTTCTTTGTATTCTCTTG+TGG | + | chr4.2:32080795-32080814 | MS.gene065883:CDS | 30.0% | |
TCACCTAAAGTAACAATCTT+AGG | - | chr4.2:32080478-32080497 | None:intergenic | 30.0% | |
! | CTTTTGTATTCAACCAAATG+AGG | + | chr4.2:32080357-32080376 | MS.gene065883:CDS | 30.0% |
! | GCTTCAGTTGTATAATCTTT+TGG | + | chr4.2:32080399-32080418 | MS.gene065883:CDS | 30.0% |
!! | TGAAATTGATTTGCTGAGAT+GGG | - | chr4.2:32079864-32079883 | None:intergenic | 30.0% |
!!! | CAATTGCTTGATTTGGTTTT+TGG | - | chr4.2:32079832-32079851 | None:intergenic | 30.0% |
!!! | GTTGATTTTGGAATTGTTCA+AGG | + | chr4.2:32080115-32080134 | MS.gene065883:CDS | 30.0% |
!!! | GTTGTTCTTGTTGTTGTTTT+TGG | - | chr4.2:32079277-32079296 | None:intergenic | 30.0% |
AGGGTTTCAATTGCTTGATT+TGG | - | chr4.2:32079839-32079858 | None:intergenic | 35.0% | |
AGTGATGAAGAAGAAGATAC+TGG | - | chr4.2:32079407-32079426 | None:intergenic | 35.0% | |
CAAGAAGAAACAGTCAATAG+AGG | - | chr4.2:32080862-32080881 | None:intergenic | 35.0% | |
GAATTGTTCAAGGGATTCAA+TGG | + | chr4.2:32080125-32080144 | MS.gene065883:CDS | 35.0% | |
GATTCATCAAGAAGCTCAAT+AGG | - | chr4.2:32080334-32080353 | None:intergenic | 35.0% | |
GTCAAGCTAAGATATTGTTG+TGG | + | chr4.2:32080761-32080780 | MS.gene065883:CDS | 35.0% | |
TTAACAGCTAAAGCCTCATT+TGG | - | chr4.2:32080373-32080392 | None:intergenic | 35.0% | |
TTCGATGAGTGAAGCAATTT+CGG | - | chr4.2:32079807-32079826 | None:intergenic | 35.0% | |
! | AGATTGTGCAGTGATTTTGT+TGG | - | chr4.2:32079939-32079958 | None:intergenic | 35.0% |
! | CTCTATTGACTGTTTCTTCT+TGG | + | chr4.2:32080860-32080879 | MS.gene065883:CDS | 35.0% |
! | TTGTGATACCTAGGATGTTT+TGG | - | chr4.2:32079334-32079353 | None:intergenic | 35.0% |
!! | AATTTCTGGTATACCTGCTA+TGG | + | chr4.2:32080204-32080223 | MS.gene065883:CDS | 35.0% |
!! | GTGAAATTGATTTGCTGAGA+TGG | - | chr4.2:32079865-32079884 | None:intergenic | 35.0% |
!! | TGCAGTGATTTTGTTGGTTA+AGG | - | chr4.2:32079933-32079952 | None:intergenic | 35.0% |
!! | TTTGGTGATGATGATGTTGT+TGG | - | chr4.2:32079316-32079335 | None:intergenic | 35.0% |
!!! | TGCTGCTTTTTTTGAGAGTT+TGG | + | chr4.2:32080564-32080583 | MS.gene065883:CDS | 35.0% |
AGCTCAATAGGCGTAAGAAT+CGG | - | chr4.2:32080322-32080341 | None:intergenic | 40.0% | |
ATATGGGCATGCATCGTTTA+AGG | - | chr4.2:32080023-32080042 | None:intergenic | 40.0% | |
CATCATCACCAAAACATCCT+AGG | + | chr4.2:32079323-32079342 | MS.gene065883:CDS | 40.0% | |
CTTGTTGAGCTATTGCCATT+AGG | - | chr4.2:32079247-32079266 | None:intergenic | 40.0% | |
GAGTGAAGCAATTTCGGTTA+GGG | - | chr4.2:32079801-32079820 | None:intergenic | 40.0% | |
GTAGCTGAAATCGATGAAAC+TGG | - | chr4.2:32080244-32080263 | None:intergenic | 40.0% | |
TGAGTGAAGCAATTTCGGTT+AGG | - | chr4.2:32079802-32079821 | None:intergenic | 40.0% | |
TGGTGAAGGAAAGTTGAAAG+CGG | - | chr4.2:32079504-32079523 | None:intergenic | 40.0% | |
TTGAAATGGGTCGGTGAAAT+CGG | - | chr4.2:32079453-32079472 | None:intergenic | 40.0% | |
TTGCTTGGTAGGAGAATTGA+TGG | + | chr4.2:32080637-32080656 | MS.gene065883:CDS | 40.0% | |
! | ATGAAGCTAGTTTGACGACT+CGG | + | chr4.2:32080500-32080519 | MS.gene065883:CDS | 40.0% |
! | TAAGGTATCCATCCAGTCAT+CGG | - | chr4.2:32079570-32079589 | None:intergenic | 40.0% |
! | TGAAAACGACGATGTCGTTT+CGG | - | chr4.2:32079753-32079772 | None:intergenic | 40.0% |
! | TTGTTGTTGTTGTTGTGCCA+TGG | - | chr4.2:32079380-32079399 | None:intergenic | 40.0% |
!! | AAACGGGTTGAGATGGAAAT+CGG | - | chr4.2:32079615-32079634 | None:intergenic | 40.0% |
!! | AAGGTTTTGATGGAAAGCTG+TGG | + | chr4.2:32080703-32080722 | MS.gene065883:CDS | 40.0% |
!! | AGAACAGTGGAAGGTTTTGA+TGG | + | chr4.2:32080693-32080712 | MS.gene065883:CDS | 40.0% |
!! | AGGAGAATTGATGGTGTGAT+TGG | + | chr4.2:32080646-32080665 | MS.gene065883:CDS | 40.0% |
!! | ATGATGAAAACGGGTTGAGA+TGG | - | chr4.2:32079622-32079641 | None:intergenic | 40.0% |
!! | GTTTCATCGATTTCAGCTAC+CGG | + | chr4.2:32080244-32080263 | MS.gene065883:CDS | 40.0% |
!! | TGATTTGCTGAGATGGGTTA+GGG | - | chr4.2:32079858-32079877 | None:intergenic | 40.0% |
!! | TGTTGAAAAAGCGCTTCGTT+TGG | + | chr4.2:32080438-32080457 | MS.gene065883:CDS | 40.0% |
!! | TTGATTTGCTGAGATGGGTT+AGG | - | chr4.2:32079859-32079878 | None:intergenic | 40.0% |
!!! | AAGCTGTGGTTTTGAATCAG+TGG | + | chr4.2:32080717-32080736 | MS.gene065883:CDS | 40.0% |
!!! | AGCTGTGGTTTTGAATCAGT+GGG | + | chr4.2:32080718-32080737 | MS.gene065883:CDS | 40.0% |
!!! | CGGTTAGGGTTTTAAGAAGT+GGG | - | chr4.2:32079787-32079806 | None:intergenic | 40.0% |
!!! | GGTTTTAAGAAGTGGGTTTG+TGG | - | chr4.2:32079780-32079799 | None:intergenic | 40.0% |
!!! | TCAACCTGCTTTTTTGTCTC+TGG | + | chr4.2:32080822-32080841 | MS.gene065883:CDS | 40.0% |
!!! | TCGGTTAGGGTTTTAAGAAG+TGG | - | chr4.2:32079788-32079807 | None:intergenic | 40.0% |
!!! | TTGGTGTCGTTTTTTCGTTG+CGG | - | chr4.2:32079725-32079744 | None:intergenic | 40.0% |
AGAGAGGGTTTGTGATACCT+AGG | - | chr4.2:32079343-32079362 | None:intergenic | 45.0% | |
AGGAAAGTTGAAAGCGGGAT+CGG | - | chr4.2:32079498-32079517 | None:intergenic | 45.0% | |
ATGGAAATCGGAGTGGTTGT+CGG | - | chr4.2:32079603-32079622 | None:intergenic | 45.0% | |
CAAGCCAGAGACAAAAAAGC+AGG | - | chr4.2:32080829-32080848 | None:intergenic | 45.0% | |
CACTGACAGTGGAAACCTAA+TGG | + | chr4.2:32079229-32079248 | MS.gene065883:CDS | 45.0% | |
GAAGTTCCTAAAGCCATAGC+AGG | - | chr4.2:32080220-32080239 | None:intergenic | 45.0% | |
GATGTAGTGAGACAGAGAGA+GGG | - | chr4.2:32079358-32079377 | None:intergenic | 45.0% | |
GCATTTGCAACTCGTTCTTC+TGG | + | chr4.2:32080163-32080182 | MS.gene065883:CDS | 45.0% | |
GCGATTCTTGAAGCAACAGA+AGG | + | chr4.2:32080073-32080092 | MS.gene065883:CDS | 45.0% | |
GGAGGATAAAGAACAGTGGA+AGG | + | chr4.2:32080684-32080703 | MS.gene065883:CDS | 45.0% | |
GGATGGAGGATAAAGAACAG+TGG | + | chr4.2:32080680-32080699 | MS.gene065883:CDS | 45.0% | |
GGTATACCTGCTATGGCTTT+AGG | + | chr4.2:32080211-32080230 | MS.gene065883:CDS | 45.0% | |
GGTGAAGGAAAGTTGAAAGC+GGG | - | chr4.2:32079503-32079522 | None:intergenic | 45.0% | |
GTAGGTGGAAAAGACAAAGG+TGG | - | chr4.2:32079431-32079450 | None:intergenic | 45.0% | |
TCGGTAGGTGGAAAAGACAA+AGG | - | chr4.2:32079434-32079453 | None:intergenic | 45.0% | |
TCTCTGTCTCACTACATCCA+TGG | + | chr4.2:32079360-32079379 | MS.gene065883:CDS | 45.0% | |
! | CAAGTGGAGAGTCTTTTGCT+TGG | + | chr4.2:32080622-32080641 | MS.gene065883:CDS | 45.0% |
! | TGAAGCTAGTTTGACGACTC+GGG | + | chr4.2:32080501-32080520 | MS.gene065883:CDS | 45.0% |
! | TGATGGTGTGATTGGTGTGA+GGG | + | chr4.2:32080654-32080673 | MS.gene065883:CDS | 45.0% |
! | TGGAGAGTCTTTTGCTTGGT+AGG | + | chr4.2:32080626-32080645 | MS.gene065883:CDS | 45.0% |
! | TTCACCGACCCATTTCAAGT+CGG | + | chr4.2:32079455-32079474 | MS.gene065883:CDS | 45.0% |
!! | TTGATGGTGTGATTGGTGTG+AGG | + | chr4.2:32080653-32080672 | MS.gene065883:CDS | 45.0% |
!!! | CTGCTTTTTTGTCTCTGGCT+TGG | + | chr4.2:32080827-32080846 | MS.gene065883:CDS | 45.0% |
!!! | TCGTTTTTTCGTTGCGGAGT+GGG | - | chr4.2:32079719-32079738 | None:intergenic | 45.0% |
AAACGGAAGGTGGTTGAGTG+AGG | - | chr4.2:32079533-32079552 | None:intergenic | 50.0% | |
AACGGAAGGTGGTTGAGTGA+GGG | - | chr4.2:32079532-32079551 | None:intergenic | 50.0% | |
AATGGGTCGGTGAAATCGGT+AGG | - | chr4.2:32079449-32079468 | None:intergenic | 50.0% | |
CCAGTCATCGGAGTCGAAAT+CGG | - | chr4.2:32079558-32079577 | None:intergenic | 50.0% | |
CGGAGTCGAAATCGGAGAAA+CGG | - | chr4.2:32079550-32079569 | None:intergenic | 50.0% | |
CTCTCCACTTGAAACCTCTC+TGG | - | chr4.2:32080613-32080632 | None:intergenic | 50.0% | |
GAAATCGGAGAAACGGAAGG+TGG | - | chr4.2:32079543-32079562 | None:intergenic | 50.0% | |
GGATGTAGTGAGACAGAGAG+AGG | - | chr4.2:32079359-32079378 | None:intergenic | 50.0% | |
GGTTGAGATGGAAATCGGAG+TGG | - | chr4.2:32079610-32079629 | None:intergenic | 50.0% | |
GTCGAAATCGGAGAAACGGA+AGG | - | chr4.2:32079546-32079565 | None:intergenic | 50.0% | |
TTCGCCAGAGAGGTTTCAAG+TGG | + | chr4.2:32080606-32080625 | MS.gene065883:CDS | 50.0% | |
TTTCGACTCCGATGACTGGA+TGG | + | chr4.2:32079559-32079578 | MS.gene065883:CDS | 50.0% | |
! | AAACGACGATGTCGTTTCGG+TGG | - | chr4.2:32079750-32079769 | None:intergenic | 50.0% |
! | GATTGGGATTTGGAGTGGCA+CGG | - | chr4.2:32079690-32079709 | None:intergenic | 50.0% |
! | GCTTACATGTGCACTGACAG+TGG | + | chr4.2:32079218-32079237 | MS.gene065883:CDS | 50.0% |
! | GGTTGGATTGGGATTTGGAG+TGG | - | chr4.2:32079695-32079714 | None:intergenic | 50.0% |
! | TCACCGACCCATTTCAAGTC+GGG | + | chr4.2:32079456-32079475 | MS.gene065883:CDS | 50.0% |
! | TGAGAGTTTGGAGCCGAACA+TGG | + | chr4.2:32080576-32080595 | MS.gene065883:CDS | 50.0% |
! | TGGGTGGTTGGATTGGGATT+TGG | - | chr4.2:32079700-32079719 | None:intergenic | 50.0% |
!! | AAAGCGGGATCGGTGTTTTC+AGG | - | chr4.2:32079488-32079507 | None:intergenic | 50.0% |
!!! | GTCGTTTTTTCGTTGCGGAG+TGG | - | chr4.2:32079720-32079739 | None:intergenic | 50.0% |
!!! | TTTTTTCGTTGCGGAGTGGG+TGG | - | chr4.2:32079716-32079735 | None:intergenic | 50.0% |
CCGATTTCGACTCCGATGAC+TGG | + | chr4.2:32079555-32079574 | MS.gene065883:CDS | 55.0% | |
CGGGTCGGGCATGATGAAAA+CGG | - | chr4.2:32079632-32079651 | None:intergenic | 55.0% | |
GAAATCGGAGTGGTTGTCGG+CGG | - | chr4.2:32079600-32079619 | None:intergenic | 55.0% | |
GATTGGTGTGAGGGAGAGGA+TGG | + | chr4.2:32080663-32080682 | MS.gene065883:CDS | 55.0% | |
GGCGAATCCAACGCCATGTT+CGG | - | chr4.2:32080592-32080611 | None:intergenic | 55.0% | |
GGGTCGGGCATGATGAAAAC+GGG | - | chr4.2:32079631-32079650 | None:intergenic | 55.0% | |
GGTAGGAGAAGATCCGGTTG+CGG | - | chr4.2:32079662-32079681 | None:intergenic | 55.0% | |
GTGTGATTGGTGTGAGGGAG+AGG | + | chr4.2:32080659-32080678 | MS.gene065883:CDS | 55.0% | |
! | CGACCCATTTCAAGTCGGGT+CGG | + | chr4.2:32079460-32079479 | MS.gene065883:CDS | 55.0% |
! | CGACCCGACTTGAAATGGGT+CGG | - | chr4.2:32079462-32079481 | None:intergenic | 55.0% |
! | CGATGTCGTTTCGGTGGTGT+TGG | - | chr4.2:32079744-32079763 | None:intergenic | 55.0% |
! | GACCCATTTCAAGTCGGGTC+GGG | + | chr4.2:32079461-32079480 | MS.gene065883:CDS | 55.0% |
! | GACCCGACCCGACTTGAAAT+GGG | - | chr4.2:32079466-32079485 | None:intergenic | 55.0% |
! | GCTAGTTTGACGACTCGGGT+TGG | + | chr4.2:32080505-32080524 | MS.gene065883:CDS | 55.0% |
! | TTTGGAGCCGAACATGGCGT+TGG | + | chr4.2:32080582-32080601 | MS.gene065883:CDS | 55.0% |
ATCCGGTTGCGGCGAAAGTC+GGG | - | chr4.2:32079651-32079670 | None:intergenic | 60.0% | |
GAGTGAGGGTCGAGTGGTGA+AGG | - | chr4.2:32079518-32079537 | None:intergenic | 60.0% | |
GATCCGGTTGCGGCGAAAGT+CGG | - | chr4.2:32079652-32079671 | None:intergenic | 60.0% | |
GCGGAGTGGGTGGTTGGATT+GGG | - | chr4.2:32079706-32079725 | None:intergenic | 60.0% | |
GGGTCGGTGAAATCGGTAGG+TGG | - | chr4.2:32079446-32079465 | None:intergenic | 60.0% | |
GTGGTTGAGTGAGGGTCGAG+TGG | - | chr4.2:32079524-32079543 | None:intergenic | 60.0% | |
GTTGTCGGCGGCGGACATTA+AGG | - | chr4.2:32079588-32079607 | None:intergenic | 60.0% | |
TGCGGAGTGGGTGGTTGGAT+TGG | - | chr4.2:32079707-32079726 | None:intergenic | 60.0% | |
TGGTGTGAGGGAGAGGATGG+AGG | + | chr4.2:32080666-32080685 | MS.gene065883:CDS | 60.0% | |
TTCGTTGCGGAGTGGGTGGT+TGG | - | chr4.2:32079712-32079731 | None:intergenic | 60.0% | |
! | ATTTGGAGTGGCACGGTGGC+GGG | - | chr4.2:32079683-32079702 | None:intergenic | 60.0% |
! | GATTTGGAGTGGCACGGTGG+CGG | - | chr4.2:32079684-32079703 | None:intergenic | 60.0% |
! | GGACCCGACCCGACTTGAAA+TGG | - | chr4.2:32079467-32079486 | None:intergenic | 60.0% |
! | TGGCGTTGGATTCGCCAGAG+AGG | + | chr4.2:32080596-32080615 | MS.gene065883:CDS | 60.0% |
! | TGGGATTTGGAGTGGCACGG+TGG | - | chr4.2:32079687-32079706 | None:intergenic | 60.0% |
!! | GTGGCGGGTAGGAGAAGATC+CGG | - | chr4.2:32079668-32079687 | None:intergenic | 60.0% |
ATCGGAGTGGTTGTCGGCGG+CGG | - | chr4.2:32079597-32079616 | None:intergenic | 65.0% | |
GACCCGACTTTCGCCGCAAC+CGG | + | chr4.2:32079646-32079665 | MS.gene065883:CDS | 65.0% | |
GGTTGCGGCGAAAGTCGGGT+CGG | - | chr4.2:32079647-32079666 | None:intergenic | 65.0% | |
GTTGCGGCGAAAGTCGGGTC+GGG | - | chr4.2:32079646-32079665 | None:intergenic | 65.0% | |
!! | GGAGTGGCACGGTGGCGGGT+AGG | - | chr4.2:32079679-32079698 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 32079215 | 32080888 | 32079215 | ID=MS.gene065883 |
chr4.2 | mRNA | 32079215 | 32080888 | 32079215 | ID=MS.gene065883.t1;Parent=MS.gene065883 |
chr4.2 | exon | 32079215 | 32080888 | 32079215 | ID=MS.gene065883.t1.exon1;Parent=MS.gene065883.t1 |
chr4.2 | CDS | 32079215 | 32080888 | 32079215 | ID=cds.MS.gene065883.t1;Parent=MS.gene065883.t1 |
Gene Sequence |
Protein sequence |