Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066268.t1 | AES62434.1 | 82.7 | 312 | 53 | 1 | 1 | 311 | 1 | 312 | 1.40E-113 | 419.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066268.t1 | Q9FLX8 | 70.6 | 102 | 30 | 0 | 172 | 273 | 153 | 254 | 2.4e-37 | 157.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066268.t1 | G7IDY1 | 82.7 | 312 | 53 | 1 | 1 | 311 | 1 | 312 | 1.0e-113 | 419.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene066268.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066268.t1 | MTR_1g099600 | 95.192 | 312 | 14 | 1 | 1 | 311 | 1 | 312 | 0.0 | 520 |
MS.gene066268.t1 | MTR_8g028565 | 67.544 | 114 | 34 | 2 | 160 | 271 | 132 | 244 | 6.80e-46 | 158 |
MS.gene066268.t1 | MTR_7g079040 | 56.291 | 151 | 55 | 4 | 161 | 302 | 132 | 280 | 3.25e-45 | 156 |
MS.gene066268.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 6.22e-38 | 139 |
MS.gene066268.t1 | MTR_2g032030 | 55.738 | 122 | 40 | 2 | 164 | 276 | 238 | 354 | 1.63e-37 | 139 |
MS.gene066268.t1 | MTR_8g098945 | 44.262 | 183 | 85 | 7 | 137 | 311 | 84 | 257 | 6.89e-35 | 128 |
MS.gene066268.t1 | MTR_2g024380 | 50.420 | 119 | 55 | 3 | 163 | 277 | 229 | 347 | 6.69e-32 | 124 |
MS.gene066268.t1 | MTR_7g109600 | 40.260 | 154 | 70 | 2 | 147 | 292 | 8 | 147 | 1.57e-31 | 119 |
MS.gene066268.t1 | MTR_8g069935 | 38.012 | 171 | 87 | 5 | 116 | 275 | 254 | 416 | 1.81e-29 | 117 |
MS.gene066268.t1 | MTR_2g024350 | 50.495 | 101 | 47 | 2 | 180 | 277 | 4 | 104 | 1.06e-28 | 110 |
MS.gene066268.t1 | MTR_8g067635 | 53.061 | 98 | 44 | 2 | 159 | 254 | 323 | 420 | 3.51e-28 | 114 |
MS.gene066268.t1 | MTR_8g087000 | 42.446 | 139 | 65 | 3 | 123 | 259 | 26 | 151 | 6.95e-28 | 108 |
MS.gene066268.t1 | MTR_8g087000 | 42.143 | 140 | 65 | 3 | 123 | 259 | 26 | 152 | 1.07e-27 | 108 |
MS.gene066268.t1 | MTR_8g067650 | 53.684 | 95 | 42 | 2 | 162 | 254 | 316 | 410 | 1.42e-27 | 112 |
MS.gene066268.t1 | MTR_2g016770 | 56.522 | 92 | 33 | 2 | 163 | 248 | 9 | 99 | 2.66e-27 | 106 |
MS.gene066268.t1 | MTR_2g016770 | 70.769 | 65 | 19 | 0 | 184 | 248 | 27 | 91 | 3.85e-27 | 105 |
MS.gene066268.t1 | MTR_6g053200 | 46.154 | 117 | 59 | 3 | 133 | 247 | 279 | 393 | 1.65e-26 | 109 |
MS.gene066268.t1 | MTR_5g016610 | 58.824 | 85 | 29 | 2 | 163 | 242 | 174 | 257 | 9.44e-26 | 103 |
MS.gene066268.t1 | MTR_4g094908 | 54.118 | 85 | 34 | 1 | 163 | 242 | 240 | 324 | 9.74e-25 | 102 |
MS.gene066268.t1 | MTR_2g083870 | 52.747 | 91 | 33 | 1 | 164 | 244 | 50 | 140 | 1.13e-24 | 100 |
MS.gene066268.t1 | MTR_1g070455 | 53.659 | 82 | 37 | 1 | 162 | 243 | 272 | 352 | 5.40e-23 | 97.8 |
MS.gene066268.t1 | MTR_4g127040 | 51.807 | 83 | 35 | 1 | 165 | 242 | 221 | 303 | 1.12e-22 | 96.3 |
MS.gene066268.t1 | MTR_1g009613 | 48.750 | 80 | 40 | 1 | 162 | 241 | 241 | 319 | 1.91e-21 | 93.2 |
MS.gene066268.t1 | MTR_0117s0040 | 36.719 | 128 | 76 | 3 | 117 | 241 | 6 | 131 | 8.52e-21 | 89.7 |
MS.gene066268.t1 | MTR_7g011820 | 45.652 | 92 | 49 | 1 | 158 | 249 | 384 | 474 | 1.16e-19 | 89.7 |
MS.gene066268.t1 | MTR_7g011820 | 43.077 | 65 | 35 | 2 | 180 | 244 | 224 | 286 | 1.50e-11 | 65.1 |
MS.gene066268.t1 | MTR_3g108960 | 44.578 | 83 | 45 | 1 | 159 | 241 | 290 | 371 | 9.43e-19 | 86.3 |
MS.gene066268.t1 | MTR_4g130900 | 45.783 | 83 | 43 | 2 | 166 | 247 | 340 | 421 | 9.77e-19 | 86.7 |
MS.gene066268.t1 | MTR_7g080020 | 44.048 | 84 | 45 | 2 | 166 | 248 | 474 | 556 | 1.68e-17 | 83.6 |
MS.gene066268.t1 | MTR_7g080020 | 45.205 | 73 | 38 | 2 | 172 | 244 | 268 | 338 | 1.36e-14 | 74.7 |
MS.gene066268.t1 | MTR_3g053330 | 40.426 | 94 | 54 | 1 | 181 | 272 | 248 | 341 | 6.39e-17 | 81.3 |
MS.gene066268.t1 | MTR_7g062220 | 51.429 | 70 | 31 | 2 | 172 | 241 | 114 | 180 | 1.63e-16 | 79.0 |
MS.gene066268.t1 | MTR_4g082580 | 45.455 | 77 | 40 | 2 | 172 | 247 | 265 | 340 | 2.94e-16 | 79.0 |
MS.gene066268.t1 | MTR_4g082580 | 41.176 | 68 | 39 | 1 | 177 | 244 | 138 | 204 | 1.20e-11 | 65.1 |
MS.gene066268.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 187 | 259 | 4.06e-16 | 78.6 |
MS.gene066268.t1 | MTR_5g042920 | 44.156 | 77 | 41 | 2 | 172 | 247 | 307 | 382 | 4.14e-16 | 78.6 |
MS.gene066268.t1 | MTR_5g042920 | 42.647 | 68 | 37 | 2 | 177 | 244 | 144 | 209 | 2.33e-11 | 64.7 |
MS.gene066268.t1 | MTR_7g110720 | 46.575 | 73 | 39 | 0 | 182 | 254 | 214 | 286 | 4.59e-16 | 78.6 |
MS.gene066268.t1 | MTR_2g045360 | 43.678 | 87 | 49 | 0 | 184 | 270 | 211 | 297 | 4.93e-16 | 78.6 |
MS.gene066268.t1 | MTR_5g097490 | 40.217 | 92 | 53 | 2 | 170 | 260 | 237 | 327 | 5.57e-16 | 78.2 |
MS.gene066268.t1 | MTR_5g097490 | 39.080 | 87 | 51 | 2 | 158 | 244 | 66 | 150 | 1.17e-11 | 65.5 |
MS.gene066268.t1 | MTR_3g009470 | 42.353 | 85 | 47 | 2 | 166 | 249 | 476 | 559 | 6.93e-16 | 78.6 |
MS.gene066268.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 4.03e-13 | 70.1 |
MS.gene066268.t1 | MTR_7g100510 | 44.737 | 76 | 40 | 2 | 179 | 254 | 184 | 257 | 7.17e-16 | 78.2 |
MS.gene066268.t1 | MTR_7g100510 | 40.816 | 98 | 42 | 3 | 162 | 244 | 324 | 420 | 2.62e-15 | 76.3 |
MS.gene066268.t1 | MTR_7g080000 | 41.667 | 84 | 47 | 2 | 165 | 247 | 412 | 494 | 1.06e-15 | 78.2 |
MS.gene066268.t1 | MTR_7g080000 | 45.205 | 73 | 38 | 2 | 172 | 244 | 222 | 292 | 4.23e-15 | 76.3 |
MS.gene066268.t1 | MTR_1g086790 | 49.275 | 69 | 33 | 2 | 185 | 252 | 159 | 226 | 1.76e-15 | 76.3 |
MS.gene066268.t1 | MTR_4g013260 | 42.169 | 83 | 46 | 2 | 166 | 247 | 317 | 398 | 1.95e-15 | 77.0 |
MS.gene066268.t1 | MTR_4g013260 | 35.200 | 125 | 65 | 5 | 185 | 309 | 185 | 293 | 4.38e-13 | 69.7 |
MS.gene066268.t1 | MTR_4g094588 | 48.649 | 74 | 37 | 1 | 185 | 258 | 179 | 251 | 3.17e-15 | 75.5 |
MS.gene066268.t1 | MTR_3g031220 | 38.542 | 96 | 57 | 2 | 166 | 260 | 346 | 440 | 6.42e-15 | 75.5 |
MS.gene066268.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 2.69e-11 | 64.3 |
MS.gene066268.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 399 | 464 | 7.02e-15 | 75.5 |
MS.gene066268.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 4.74e-11 | 63.9 |
MS.gene066268.t1 | MTR_2g088000 | 50.000 | 64 | 32 | 0 | 181 | 244 | 346 | 409 | 7.42e-15 | 75.5 |
MS.gene066268.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 255 | 320 | 8.23e-15 | 75.1 |
MS.gene066268.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 6.24e-11 | 63.2 |
MS.gene066268.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 365 | 434 | 8.26e-15 | 75.1 |
MS.gene066268.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 412 | 477 | 8.46e-15 | 75.1 |
MS.gene066268.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 236 | 310 | 5.39e-11 | 63.5 |
MS.gene066268.t1 | MTR_3g056100 | 46.269 | 67 | 35 | 1 | 181 | 247 | 268 | 333 | 8.83e-15 | 74.7 |
MS.gene066268.t1 | MTR_3g056100 | 38.961 | 77 | 45 | 2 | 177 | 253 | 92 | 166 | 6.74e-11 | 63.2 |
MS.gene066268.t1 | MTR_4g049760 | 45.205 | 73 | 40 | 0 | 182 | 254 | 288 | 360 | 1.11e-14 | 74.7 |
MS.gene066268.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 253 | 322 | 1.12e-14 | 74.3 |
MS.gene066268.t1 | MTR_2g023930 | 49.206 | 63 | 32 | 0 | 182 | 244 | 303 | 365 | 1.14e-14 | 74.7 |
MS.gene066268.t1 | MTR_5g091390 | 52.459 | 61 | 28 | 1 | 185 | 245 | 158 | 217 | 1.15e-14 | 73.6 |
MS.gene066268.t1 | MTR_5g094430 | 46.479 | 71 | 34 | 2 | 185 | 252 | 231 | 300 | 1.18e-14 | 74.3 |
MS.gene066268.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 126 | 200 | 1.29e-14 | 73.2 |
MS.gene066268.t1 | MTR_4g132430 | 34.351 | 131 | 73 | 2 | 185 | 303 | 128 | 257 | 1.39e-14 | 73.9 |
MS.gene066268.t1 | MTR_4g007060 | 41.333 | 75 | 44 | 0 | 182 | 256 | 160 | 234 | 1.50e-14 | 73.2 |
MS.gene066268.t1 | MTR_8g092010 | 39.759 | 83 | 47 | 2 | 164 | 244 | 86 | 167 | 1.53e-14 | 71.2 |
MS.gene066268.t1 | MTR_5g074400 | 41.176 | 85 | 48 | 2 | 166 | 249 | 401 | 484 | 1.58e-14 | 74.3 |
MS.gene066268.t1 | MTR_5g074400 | 48.387 | 62 | 30 | 2 | 183 | 244 | 242 | 301 | 8.09e-12 | 66.2 |
MS.gene066268.t1 | MTR_5g043880 | 42.222 | 90 | 44 | 3 | 158 | 241 | 93 | 180 | 1.75e-14 | 72.8 |
MS.gene066268.t1 | MTR_1g015140 | 52.632 | 57 | 26 | 1 | 185 | 241 | 103 | 158 | 2.13e-14 | 70.1 |
MS.gene066268.t1 | MTR_7g071120 | 37.624 | 101 | 60 | 3 | 163 | 262 | 302 | 400 | 2.66e-14 | 73.6 |
MS.gene066268.t1 | MTR_7g071120 | 45.161 | 62 | 32 | 2 | 183 | 244 | 165 | 224 | 1.04e-11 | 65.9 |
MS.gene066268.t1 | MTR_8g099350 | 41.176 | 85 | 43 | 2 | 162 | 239 | 105 | 189 | 2.81e-14 | 72.8 |
MS.gene066268.t1 | MTR_4g094412 | 50.820 | 61 | 30 | 0 | 185 | 245 | 235 | 295 | 2.96e-14 | 73.2 |
MS.gene066268.t1 | MTR_3g106060 | 38.824 | 85 | 52 | 0 | 185 | 269 | 139 | 223 | 3.10e-14 | 72.0 |
MS.gene066268.t1 | MTR_3g090860 | 52.632 | 57 | 25 | 1 | 185 | 239 | 134 | 190 | 3.23e-14 | 72.8 |
MS.gene066268.t1 | MTR_4g094412 | 50.820 | 61 | 30 | 0 | 185 | 245 | 244 | 304 | 3.59e-14 | 73.2 |
MS.gene066268.t1 | MTR_4g132430 | 35.115 | 131 | 72 | 3 | 185 | 303 | 262 | 391 | 3.68e-14 | 73.2 |
MS.gene066268.t1 | MTR_4g049790 | 43.836 | 73 | 41 | 0 | 182 | 254 | 310 | 382 | 5.46e-14 | 72.8 |
MS.gene066268.t1 | MTR_7g109800 | 40.860 | 93 | 53 | 2 | 185 | 276 | 146 | 237 | 7.64e-14 | 71.2 |
MS.gene066268.t1 | MTR_4g107970 | 40.449 | 89 | 48 | 2 | 156 | 244 | 155 | 238 | 8.79e-14 | 72.0 |
MS.gene066268.t1 | MTR_4g122530 | 45.902 | 61 | 32 | 1 | 185 | 245 | 209 | 268 | 9.84e-14 | 71.6 |
MS.gene066268.t1 | MTR_3g095040 | 44.444 | 63 | 34 | 1 | 182 | 244 | 116 | 177 | 1.10e-13 | 69.3 |
MS.gene066268.t1 | MTR_7g009730 | 38.095 | 105 | 60 | 2 | 150 | 254 | 190 | 289 | 1.30e-13 | 71.6 |
MS.gene066268.t1 | MTR_4g107970 | 40.449 | 89 | 48 | 2 | 156 | 244 | 232 | 315 | 1.41e-13 | 71.6 |
MS.gene066268.t1 | MTR_2g033820 | 47.541 | 61 | 31 | 1 | 185 | 245 | 204 | 263 | 1.80e-13 | 70.5 |
MS.gene066268.t1 | MTR_2g105060 | 42.188 | 64 | 37 | 0 | 182 | 245 | 92 | 155 | 3.24e-13 | 68.6 |
MS.gene066268.t1 | MTR_3g009470 | 49.315 | 73 | 34 | 3 | 183 | 254 | 279 | 349 | 3.72e-13 | 70.1 |
MS.gene066268.t1 | MTR_8g007270 | 40.506 | 79 | 45 | 2 | 165 | 242 | 134 | 211 | 3.75e-13 | 68.2 |
MS.gene066268.t1 | MTR_3g104750 | 50.877 | 57 | 27 | 1 | 185 | 241 | 105 | 160 | 4.26e-13 | 66.6 |
MS.gene066268.t1 | MTR_2g105060 | 43.548 | 62 | 35 | 0 | 185 | 246 | 170 | 231 | 4.97e-13 | 68.9 |
MS.gene066268.t1 | MTR_7g079010 | 43.750 | 64 | 35 | 1 | 178 | 241 | 135 | 197 | 5.12e-13 | 67.4 |
MS.gene066268.t1 | MTR_1g013760 | 36.842 | 76 | 48 | 0 | 185 | 260 | 141 | 216 | 5.26e-13 | 68.6 |
MS.gene066268.t1 | MTR_1g078260 | 42.553 | 94 | 43 | 5 | 172 | 255 | 234 | 326 | 6.59e-13 | 69.3 |
MS.gene066268.t1 | MTR_8g087000 | 51.786 | 56 | 27 | 0 | 204 | 259 | 35 | 90 | 9.96e-13 | 65.9 |
MS.gene066268.t1 | MTR_8g027860 | 35.514 | 107 | 57 | 3 | 163 | 257 | 110 | 216 | 1.28e-12 | 67.8 |
MS.gene066268.t1 | MTR_7g109600 | 39.326 | 89 | 40 | 1 | 204 | 292 | 7 | 81 | 1.37e-12 | 65.9 |
MS.gene066268.t1 | MTR_1g077780 | 44.615 | 65 | 35 | 1 | 181 | 245 | 59 | 122 | 1.59e-12 | 64.7 |
MS.gene066268.t1 | MTR_7g117200 | 44.928 | 69 | 32 | 2 | 185 | 247 | 119 | 187 | 4.40e-12 | 66.2 |
MS.gene066268.t1 | MTR_5g097500 | 44.286 | 70 | 38 | 1 | 178 | 247 | 224 | 292 | 5.14e-12 | 65.9 |
MS.gene066268.t1 | MTR_1g013790 | 33.962 | 106 | 68 | 2 | 185 | 289 | 102 | 206 | 5.21e-12 | 65.1 |
MS.gene066268.t1 | MTR_5g067680 | 50.877 | 57 | 26 | 1 | 185 | 239 | 203 | 259 | 5.74e-12 | 66.2 |
MS.gene066268.t1 | MTR_7g028415 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.36e-12 | 63.2 |
MS.gene066268.t1 | MTR_7g028710 | 42.623 | 61 | 34 | 1 | 181 | 241 | 90 | 149 | 7.36e-12 | 63.2 |
MS.gene066268.t1 | MTR_6g086555 | 49.180 | 61 | 29 | 2 | 185 | 244 | 207 | 266 | 1.07e-11 | 65.5 |
MS.gene066268.t1 | MTR_8g092140 | 46.552 | 58 | 30 | 1 | 185 | 242 | 161 | 217 | 1.17e-11 | 63.9 |
MS.gene066268.t1 | MTR_5g067700 | 41.250 | 80 | 40 | 2 | 162 | 239 | 89 | 163 | 1.54e-11 | 63.5 |
MS.gene066268.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 169 | 225 | 2.07e-11 | 63.2 |
MS.gene066268.t1 | MTR_3g031220 | 44.444 | 63 | 33 | 2 | 183 | 245 | 197 | 257 | 2.11e-11 | 64.3 |
MS.gene066268.t1 | MTR_3g095080 | 46.552 | 58 | 30 | 1 | 185 | 242 | 145 | 201 | 2.29e-11 | 62.8 |
MS.gene066268.t1 | MTR_7g105000 | 58.333 | 48 | 20 | 0 | 157 | 204 | 293 | 340 | 4.82e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066268.t1 | AT5G52830 | 75.229 | 109 | 23 | 1 | 162 | 266 | 143 | 251 | 4.45e-53 | 177 |
MS.gene066268.t1 | AT4G01250 | 40.755 | 265 | 85 | 8 | 1 | 257 | 1 | 201 | 6.39e-50 | 168 |
MS.gene066268.t1 | AT4G23550 | 62.745 | 102 | 38 | 0 | 169 | 270 | 125 | 226 | 5.87e-39 | 139 |
MS.gene066268.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 182 | 292 | 3.58e-36 | 135 |
MS.gene066268.t1 | AT2G34830 | 56.757 | 111 | 39 | 1 | 151 | 252 | 173 | 283 | 3.71e-36 | 135 |
MS.gene066268.t1 | AT1G30650 | 46.067 | 178 | 67 | 5 | 156 | 305 | 177 | 353 | 4.05e-36 | 135 |
MS.gene066268.t1 | AT5G45050 | 51.327 | 113 | 49 | 1 | 140 | 252 | 1114 | 1220 | 7.71e-33 | 129 |
MS.gene066268.t1 | AT5G45050 | 51.327 | 113 | 49 | 1 | 140 | 252 | 1142 | 1248 | 8.27e-33 | 128 |
MS.gene066268.t1 | AT5G45050 | 51.327 | 113 | 49 | 1 | 140 | 252 | 1003 | 1109 | 9.59e-33 | 128 |
MS.gene066268.t1 | AT1G29280 | 65.278 | 72 | 20 | 1 | 184 | 255 | 74 | 140 | 1.21e-25 | 103 |
MS.gene066268.t1 | AT4G24240 | 58.824 | 85 | 29 | 2 | 163 | 242 | 256 | 339 | 1.65e-25 | 104 |
MS.gene066268.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 71 | 152 | 1.97e-25 | 102 |
MS.gene066268.t1 | AT3G58710 | 58.537 | 82 | 26 | 1 | 184 | 257 | 70 | 151 | 2.05e-25 | 102 |
MS.gene066268.t1 | AT2G23320 | 52.381 | 84 | 36 | 1 | 163 | 242 | 215 | 298 | 5.86e-25 | 102 |
MS.gene066268.t1 | AT5G28650 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 1.13e-23 | 99.4 |
MS.gene066268.t1 | AT5G45260 | 49.505 | 101 | 47 | 3 | 161 | 258 | 1185 | 1284 | 1.23e-23 | 102 |
MS.gene066268.t1 | AT3G04670 | 67.797 | 59 | 19 | 0 | 185 | 243 | 263 | 321 | 2.14e-23 | 98.6 |
MS.gene066268.t1 | AT2G24570 | 51.220 | 82 | 38 | 1 | 162 | 241 | 219 | 300 | 3.13e-22 | 95.1 |
MS.gene066268.t1 | AT4G31550 | 50.000 | 82 | 39 | 1 | 162 | 241 | 222 | 303 | 5.19e-22 | 94.7 |
MS.gene066268.t1 | AT4G31550 | 48.780 | 82 | 40 | 1 | 162 | 241 | 221 | 302 | 1.55e-21 | 93.2 |
MS.gene066268.t1 | AT2G30590 | 51.250 | 80 | 38 | 1 | 164 | 243 | 294 | 372 | 1.81e-20 | 90.9 |
MS.gene066268.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 287 | 377 | 8.71e-18 | 84.0 |
MS.gene066268.t1 | AT4G30935 | 45.570 | 79 | 41 | 2 | 168 | 245 | 314 | 391 | 1.02e-17 | 83.6 |
MS.gene066268.t1 | AT2G04880 | 44.565 | 92 | 44 | 3 | 165 | 250 | 263 | 353 | 1.04e-17 | 83.6 |
MS.gene066268.t1 | AT4G26440 | 43.158 | 95 | 49 | 3 | 166 | 256 | 353 | 446 | 1.04e-16 | 80.9 |
MS.gene066268.t1 | AT4G26440 | 34.286 | 140 | 74 | 5 | 118 | 256 | 127 | 249 | 5.30e-15 | 75.9 |
MS.gene066268.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 341 | 403 | 1.94e-16 | 79.7 |
MS.gene066268.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 9.71e-14 | 72.0 |
MS.gene066268.t1 | AT3G01080 | 53.125 | 64 | 29 | 1 | 181 | 244 | 303 | 365 | 2.15e-16 | 79.7 |
MS.gene066268.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 163 | 238 | 1.10e-13 | 71.6 |
MS.gene066268.t1 | AT5G56270 | 43.373 | 83 | 45 | 2 | 166 | 247 | 468 | 549 | 4.57e-16 | 79.3 |
MS.gene066268.t1 | AT5G56270 | 48.333 | 60 | 29 | 2 | 185 | 244 | 274 | 331 | 4.45e-12 | 67.0 |
MS.gene066268.t1 | AT1G13960 | 41.176 | 85 | 48 | 2 | 161 | 244 | 385 | 468 | 6.97e-16 | 78.6 |
MS.gene066268.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 185 | 287 | 8.57e-13 | 68.9 |
MS.gene066268.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 196 | 284 | 7.01e-16 | 78.2 |
MS.gene066268.t1 | AT2G38470 | 39.091 | 110 | 62 | 3 | 172 | 277 | 349 | 457 | 8.46e-16 | 78.2 |
MS.gene066268.t1 | AT2G38470 | 35.484 | 124 | 69 | 4 | 185 | 302 | 185 | 303 | 1.62e-12 | 68.2 |
MS.gene066268.t1 | AT1G13960 | 44.595 | 74 | 39 | 2 | 172 | 244 | 243 | 315 | 1.00e-15 | 77.4 |
MS.gene066268.t1 | AT1G13960 | 34.862 | 109 | 60 | 4 | 141 | 244 | 32 | 134 | 2.03e-12 | 67.4 |
MS.gene066268.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.13e-15 | 76.3 |
MS.gene066268.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.13e-15 | 76.3 |
MS.gene066268.t1 | AT1G69310 | 43.333 | 90 | 43 | 3 | 158 | 241 | 116 | 203 | 1.13e-15 | 76.3 |
MS.gene066268.t1 | AT4G04450 | 39.326 | 89 | 54 | 0 | 182 | 270 | 290 | 378 | 1.32e-15 | 77.4 |
MS.gene066268.t1 | AT2G03340 | 43.038 | 79 | 43 | 2 | 172 | 249 | 402 | 479 | 1.50e-15 | 77.4 |
MS.gene066268.t1 | AT2G03340 | 42.308 | 78 | 43 | 2 | 179 | 256 | 245 | 320 | 4.85e-13 | 69.7 |
MS.gene066268.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 213 | 309 | 2.34e-15 | 75.5 |
MS.gene066268.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 110 | 176 | 1.63e-12 | 67.4 |
MS.gene066268.t1 | AT3G62340 | 35.115 | 131 | 80 | 3 | 163 | 289 | 95 | 224 | 3.42e-15 | 74.7 |
MS.gene066268.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.71e-15 | 73.6 |
MS.gene066268.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.11e-12 | 66.6 |
MS.gene066268.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.71e-15 | 73.6 |
MS.gene066268.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.11e-12 | 66.6 |
MS.gene066268.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.71e-15 | 73.6 |
MS.gene066268.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.11e-12 | 66.6 |
MS.gene066268.t1 | AT5G07100 | 39.796 | 98 | 53 | 3 | 164 | 256 | 120 | 216 | 3.71e-15 | 73.6 |
MS.gene066268.t1 | AT5G07100 | 41.176 | 68 | 39 | 1 | 177 | 244 | 17 | 83 | 1.11e-12 | 66.6 |
MS.gene066268.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 3.95e-15 | 76.3 |
MS.gene066268.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 3.95e-15 | 76.3 |
MS.gene066268.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 3.95e-15 | 76.3 |
MS.gene066268.t1 | AT4G22070 | 49.206 | 63 | 32 | 0 | 182 | 244 | 295 | 357 | 3.95e-15 | 76.3 |
MS.gene066268.t1 | AT2G21900 | 40.449 | 89 | 45 | 2 | 164 | 245 | 82 | 169 | 3.98e-15 | 73.2 |
MS.gene066268.t1 | AT1G29860 | 43.590 | 78 | 40 | 2 | 185 | 262 | 137 | 210 | 4.86e-15 | 74.3 |
MS.gene066268.t1 | AT1G68150 | 48.000 | 75 | 38 | 1 | 185 | 259 | 236 | 309 | 5.28e-15 | 75.1 |
MS.gene066268.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 143 | 255 | 5.58e-15 | 74.3 |
MS.gene066268.t1 | AT2G40740 | 41.667 | 120 | 53 | 5 | 160 | 269 | 152 | 264 | 5.77e-15 | 74.3 |
MS.gene066268.t1 | AT4G01720 | 53.333 | 60 | 28 | 0 | 185 | 244 | 240 | 299 | 5.84e-15 | 75.5 |
MS.gene066268.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 323 | 405 | 6.78e-15 | 75.1 |
MS.gene066268.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 159 | 249 | 1.64e-14 | 73.9 |
MS.gene066268.t1 | AT5G26170 | 51.724 | 58 | 27 | 1 | 185 | 242 | 114 | 170 | 6.99e-15 | 72.0 |
MS.gene066268.t1 | AT1G62300 | 49.206 | 63 | 32 | 0 | 182 | 244 | 310 | 372 | 7.33e-15 | 75.5 |
MS.gene066268.t1 | AT5G46350 | 47.297 | 74 | 38 | 1 | 185 | 258 | 184 | 256 | 7.49e-15 | 74.3 |
MS.gene066268.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 241 | 323 | 8.24e-15 | 74.3 |
MS.gene066268.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 77 | 167 | 1.83e-14 | 73.6 |
MS.gene066268.t1 | AT2G37260 | 45.882 | 85 | 39 | 3 | 162 | 241 | 243 | 325 | 8.35e-15 | 74.3 |
MS.gene066268.t1 | AT2G37260 | 41.935 | 93 | 52 | 2 | 178 | 270 | 79 | 169 | 1.80e-14 | 73.6 |
MS.gene066268.t1 | AT5G49520 | 50.769 | 65 | 30 | 2 | 180 | 244 | 218 | 280 | 1.34e-14 | 74.3 |
MS.gene066268.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 186 | 255 | 1.43e-14 | 74.3 |
MS.gene066268.t1 | AT5G43290 | 39.560 | 91 | 54 | 1 | 151 | 241 | 81 | 170 | 1.44e-14 | 72.8 |
MS.gene066268.t1 | AT5G15130 | 45.714 | 70 | 38 | 0 | 185 | 254 | 228 | 297 | 1.47e-14 | 74.3 |
MS.gene066268.t1 | AT4G18170 | 51.613 | 62 | 29 | 1 | 185 | 246 | 173 | 233 | 1.49e-14 | 73.6 |
MS.gene066268.t1 | AT3G01080 | 42.308 | 78 | 43 | 2 | 180 | 257 | 201 | 276 | 5.38e-14 | 72.0 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 338 | 405 | 6.58e-14 | 72.4 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 378 | 445 | 7.92e-14 | 72.4 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 306 | 373 | 8.74e-14 | 72.0 |
MS.gene066268.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 204 | 274 | 8.97e-14 | 71.6 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 9.70e-14 | 71.6 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 9.70e-14 | 71.6 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 9.70e-14 | 71.6 |
MS.gene066268.t1 | AT4G26640 | 43.478 | 69 | 38 | 1 | 181 | 249 | 202 | 269 | 9.70e-14 | 71.6 |
MS.gene066268.t1 | AT1G80840 | 39.437 | 71 | 43 | 0 | 185 | 255 | 147 | 217 | 1.19e-13 | 70.5 |
MS.gene066268.t1 | AT2G30250 | 44.000 | 75 | 40 | 2 | 172 | 245 | 315 | 388 | 1.22e-13 | 71.2 |
MS.gene066268.t1 | AT1G69810 | 47.887 | 71 | 36 | 1 | 185 | 254 | 146 | 216 | 1.30e-13 | 70.9 |
MS.gene066268.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.57e-13 | 68.6 |
MS.gene066268.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 104 | 163 | 2.57e-13 | 68.6 |
MS.gene066268.t1 | AT4G23810 | 34.351 | 131 | 66 | 5 | 185 | 310 | 159 | 274 | 2.64e-13 | 69.7 |
MS.gene066268.t1 | AT1G18860 | 50.000 | 60 | 30 | 0 | 185 | 244 | 240 | 299 | 3.68e-13 | 70.1 |
MS.gene066268.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 126 | 185 | 3.81e-13 | 68.6 |
MS.gene066268.t1 | AT2G44745 | 41.026 | 78 | 44 | 2 | 165 | 241 | 125 | 201 | 4.02e-13 | 67.8 |
MS.gene066268.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 112 | 188 | 4.05e-13 | 68.2 |
MS.gene066268.t1 | AT1G55600 | 37.500 | 80 | 48 | 2 | 166 | 244 | 288 | 366 | 5.06e-13 | 69.7 |
MS.gene066268.t1 | AT5G64810 | 49.123 | 57 | 28 | 1 | 185 | 241 | 111 | 166 | 5.08e-13 | 67.0 |
MS.gene066268.t1 | AT2G25000 | 46.667 | 60 | 32 | 0 | 185 | 244 | 147 | 206 | 5.64e-13 | 68.2 |
MS.gene066268.t1 | AT2G46130 | 49.206 | 63 | 30 | 2 | 179 | 241 | 26 | 86 | 6.62e-13 | 64.7 |
MS.gene066268.t1 | AT4G31800 | 41.558 | 77 | 45 | 0 | 185 | 261 | 177 | 253 | 6.62e-13 | 68.6 |
MS.gene066268.t1 | AT2G40750 | 34.426 | 122 | 65 | 5 | 183 | 290 | 151 | 271 | 7.16e-13 | 68.6 |
MS.gene066268.t1 | AT5G41570 | 39.744 | 78 | 45 | 2 | 165 | 241 | 78 | 154 | 8.20e-13 | 66.2 |
MS.gene066268.t1 | AT1G64000 | 45.161 | 62 | 33 | 1 | 180 | 241 | 110 | 170 | 8.96e-13 | 66.6 |
MS.gene066268.t1 | AT2G46400 | 33.333 | 117 | 72 | 3 | 129 | 239 | 45 | 161 | 9.60e-13 | 67.8 |
MS.gene066268.t1 | AT2G47260 | 37.864 | 103 | 54 | 4 | 166 | 260 | 154 | 254 | 1.17e-12 | 68.2 |
MS.gene066268.t1 | AT3G56400 | 41.026 | 78 | 39 | 3 | 164 | 239 | 105 | 177 | 1.73e-12 | 67.0 |
MS.gene066268.t1 | AT3G01970 | 43.548 | 62 | 34 | 1 | 181 | 242 | 62 | 122 | 2.32e-12 | 64.3 |
MS.gene066268.t1 | AT5G13080 | 42.623 | 61 | 34 | 1 | 181 | 241 | 64 | 123 | 2.66e-12 | 63.9 |
MS.gene066268.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 110 | 166 | 4.43e-12 | 65.9 |
MS.gene066268.t1 | AT4G11070 | 50.877 | 57 | 26 | 1 | 185 | 239 | 142 | 198 | 4.66e-12 | 66.2 |
MS.gene066268.t1 | AT5G24110 | 39.024 | 82 | 48 | 1 | 160 | 239 | 89 | 170 | 4.91e-12 | 65.9 |
MS.gene066268.t1 | AT4G39410 | 42.667 | 75 | 42 | 1 | 185 | 259 | 224 | 297 | 1.04e-11 | 65.1 |
Find 78 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGATGTGGAGAACCTTTAA+TGG | 0.267330 | 1.1:+71756574 | None:intergenic |
TGCAATATGAGGAGGGGAAT+TGG | 0.276980 | 1.1:+71757059 | None:intergenic |
TCTTGAAGCTCATTGGTTAT+AGG | 0.277524 | 1.1:+71757150 | None:intergenic |
GTGTTTGAGGCTGGATGCTT+TGG | 0.300180 | 1.1:+71756866 | None:intergenic |
CTTTCGCGCGGTACAACCTT+TGG | 0.306785 | 1.1:+71756333 | None:intergenic |
TTGTGGGCATGGCGAAAATA+TGG | 0.311492 | 1.1:-71756605 | MS.gene066268:CDS |
TGTTTGAGGCTGGATGCTTT+GGG | 0.315208 | 1.1:+71756867 | None:intergenic |
GTTATAGGTTGCACTACATT+AGG | 0.317458 | 1.1:+71757165 | None:intergenic |
TGTTTAGCACCAAACTCTTT+TGG | 0.319771 | 1.1:-71756130 | MS.gene066268:CDS |
GCAATATGAGGAGGGGAATT+GGG | 0.331773 | 1.1:+71757060 | None:intergenic |
TCTTCTTCACCAAAAGAGTT+TGG | 0.338560 | 1.1:+71756121 | None:intergenic |
CTACCACTTCCTCTTCCATT+TGG | 0.346152 | 1.1:-71757002 | MS.gene066268:CDS |
AAACACCTAGATCAAGAAAA+AGG | 0.350761 | 1.1:-71756849 | MS.gene066268:intron |
GGGTAAAAGATGTCAATAAT+TGG | 0.354816 | 1.1:+71757121 | None:intergenic |
AGGAAGTGGTAGGGACAAAA+TGG | 0.358832 | 1.1:+71757013 | None:intergenic |
TATAACAATGGCTGAGGATT+GGG | 0.363678 | 1.1:-71757331 | None:intergenic |
TCTGTTGTTGTTGTAATTGT+TGG | 0.364018 | 1.1:+71756929 | None:intergenic |
TTGATCTAGGTGTTTGAGGC+TGG | 0.368009 | 1.1:+71756857 | None:intergenic |
AAAAGAGTTTGGTGCTAAAC+AGG | 0.373736 | 1.1:+71756132 | None:intergenic |
TGATTGGCAGCTTCGAACTA+TGG | 0.377700 | 1.1:+71757299 | None:intergenic |
TTTGAAATTAGAAGAGGAAA+TGG | 0.378100 | 1.1:+71757218 | None:intergenic |
TTTCTTGATCTAGGTGTTTG+AGG | 0.387303 | 1.1:+71756853 | None:intergenic |
GTTGTTGTAATTGTTGGTTA+TGG | 0.398557 | 1.1:+71756935 | None:intergenic |
GTTTAGATCTTGAAGCTCAT+TGG | 0.407230 | 1.1:+71757143 | None:intergenic |
GGATGTGGAGAACCTTTAAT+GGG | 0.413222 | 1.1:+71756575 | None:intergenic |
TTCTGTTGTGGATGTATTGG+TGG | 0.430239 | 1.1:+71757275 | None:intergenic |
TGGATGTATTGGTGGCTGAT+TGG | 0.440667 | 1.1:+71757283 | None:intergenic |
ATGTTCACTGTGACATATAC+AGG | 0.458166 | 1.1:-71756280 | MS.gene066268:CDS |
TTATAACAATGGCTGAGGAT+TGG | 0.466049 | 1.1:-71757332 | None:intergenic |
CAAGAAGAAGTTGAGCTGTT+GGG | 0.466337 | 1.1:+71756157 | None:intergenic |
TTGCACAAAATGAGGCCAAA+TGG | 0.470578 | 1.1:+71756987 | None:intergenic |
CGGATGTGTCACCGGAGACT+TGG | 0.472713 | 1.1:+71756201 | None:intergenic |
AGACTTGGTTCGTGTACTTC+CGG | 0.473267 | 1.1:+71756216 | None:intergenic |
GCAAGAAGAAGTTGAGCTGT+TGG | 0.473676 | 1.1:+71756156 | None:intergenic |
GAAGTTTCTTGCACAAAATG+AGG | 0.474186 | 1.1:+71756979 | None:intergenic |
TGCATTTATAACAATGGCTG+AGG | 0.489485 | 1.1:-71757337 | None:intergenic |
AGAGGTTATCTGCGGTTACA+TGG | 0.495635 | 1.1:+71756636 | None:intergenic |
TAACCTCTCAACAGATTTGT+GGG | 0.500103 | 1.1:-71756621 | MS.gene066268:CDS |
TTCTACTTTGAAATTAGAAG+AGG | 0.512786 | 1.1:+71757212 | None:intergenic |
TTCCGGCTAGCGAGTTCCGA+TGG | 0.517215 | 1.1:+71756233 | None:intergenic |
TCCCTTGGTCATGTTTAGGA+AGG | 0.527622 | 1.1:+71756040 | None:intergenic |
AGGCCAAATGGAAGAGGAAG+TGG | 0.528219 | 1.1:+71756999 | None:intergenic |
TTATATCTGTACCTTGGATG+TGG | 0.528855 | 1.1:+71756560 | None:intergenic |
ATAACCTCTCAACAGATTTG+TGG | 0.535451 | 1.1:-71756622 | MS.gene066268:CDS |
CTAGTAGTAGTGGTGATGGT+GGG | 0.535550 | 1.1:+71757099 | None:intergenic |
ACCCATCGGAACTCGCTAGC+CGG | 0.537516 | 1.1:-71756235 | MS.gene066268:CDS |
TCCGATGGGTAGGTCTTGCA+TGG | 0.545684 | 1.1:+71756248 | None:intergenic |
CCTCATATTGCAAAATACAT+TGG | 0.547832 | 1.1:-71757048 | MS.gene066268:CDS |
TTAGAAGAGGAAATGGAAGA+TGG | 0.555768 | 1.1:+71757225 | None:intergenic |
AAAATGAGGCCAAATGGAAG+AGG | 0.562724 | 1.1:+71756993 | None:intergenic |
GAGGTGGTCGGATGTGTCAC+CGG | 0.563562 | 1.1:+71756193 | None:intergenic |
TAGTAGTAGTGGTGATGGTG+GGG | 0.565045 | 1.1:+71757100 | None:intergenic |
GTTTGAGGCTGGATGCTTTG+GGG | 0.566369 | 1.1:+71756868 | None:intergenic |
TGACTAGAAATTGAGGTGGT+CGG | 0.577828 | 1.1:+71756181 | None:intergenic |
GAATATGTTGAAGCTAGAAG+TGG | 0.578885 | 1.1:+71756957 | None:intergenic |
TCCGGCTAGCGAGTTCCGAT+GGG | 0.583330 | 1.1:+71756234 | None:intergenic |
AGTAGTAGTGGTGATGGTGG+GGG | 0.585398 | 1.1:+71757101 | None:intergenic |
TCTCAACAGATTTGTGGGCA+TGG | 0.588913 | 1.1:-71756616 | MS.gene066268:CDS |
GAAATTGAAACTGATGATGA+TGG | 0.590055 | 1.1:-71756082 | MS.gene066268:CDS |
GTTGGGTTGACTAGAAATTG+AGG | 0.607818 | 1.1:+71756174 | None:intergenic |
AAGTACACGAACCAAGTCTC+CGG | 0.613947 | 1.1:-71756212 | MS.gene066268:CDS |
TTAAAGGTTCTCCACATCCA+AGG | 0.614226 | 1.1:-71756571 | MS.gene066268:intron |
AAATGGAAGAGGAAGTGGTA+GGG | 0.618377 | 1.1:+71757004 | None:intergenic |
ACTATGACCACTAGTAGTAG+TGG | 0.620104 | 1.1:+71757089 | None:intergenic |
TATAGATGTAGCAGTTCCAA+AGG | 0.623205 | 1.1:-71756349 | MS.gene066268:CDS |
CAAATGGAAGAGGAAGTGGT+AGG | 0.623737 | 1.1:+71757003 | None:intergenic |
ACTAGTAGTAGTGGTGATGG+TGG | 0.627374 | 1.1:+71757098 | None:intergenic |
CCTTTCAACTTGCTTTCGCG+CGG | 0.627775 | 1.1:+71756321 | None:intergenic |
ATCTGTTGAGAGGTTATCTG+CGG | 0.627787 | 1.1:+71756628 | None:intergenic |
GCTAGCGAGTTCCGATGGGT+AGG | 0.628478 | 1.1:+71756238 | None:intergenic |
CCGCGCGAAAGCAAGTTGAA+AGG | 0.629161 | 1.1:-71756321 | MS.gene066268:CDS |
AGAAGAAGAGGACATCGACA+TGG | 0.634163 | 1.1:-71756104 | MS.gene066268:CDS |
ACCATCACCACTACTACTAG+TGG | 0.637150 | 1.1:-71757096 | MS.gene066268:CDS |
ACCACTAGTAGTAGTGGTGA+TGG | 0.637486 | 1.1:+71757095 | None:intergenic |
ATGCCCACAAATCTGTTGAG+AGG | 0.641173 | 1.1:+71756618 | None:intergenic |
AGATGGTATAGTATTTGTCG+TGG | 0.665737 | 1.1:+71757242 | None:intergenic |
ACCATGCAAGACCTACCCAT+CGG | 0.674071 | 1.1:-71756249 | MS.gene066268:CDS |
GGGTTGACTAGAAATTGAGG+TGG | 0.732424 | 1.1:+71756177 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTCTAATAAAAATTAATT+TGG | - | chr1.1:71756839-71756858 | MS.gene066268:intron | 10.0% |
!!! | AATCAATGTTTTAAAATTTT+TGG | + | chr1.1:71756909-71756928 | None:intergenic | 10.0% |
!!! | CACTTTTTTGTTGTATTATT+AGG | - | chr1.1:71757000-71757019 | MS.gene066268:CDS | 20.0% |
!!! | TAATACAACAAAAAAGTGTA+AGG | + | chr1.1:71756998-71757017 | None:intergenic | 20.0% |
! | TACTAGTATTATTTATGCCA+TGG | + | chr1.1:71756639-71756658 | None:intergenic | 25.0% |
!! | TTTGAAATTAGAAGAGGAAA+TGG | + | chr1.1:71756163-71756182 | None:intergenic | 25.0% |
!! | TTTTCTGTTGAATAGGAAAA+AGG | + | chr1.1:71756699-71756718 | None:intergenic | 25.0% |
!!! | TTCTACTTTGAAATTAGAAG+AGG | + | chr1.1:71756169-71756188 | None:intergenic | 25.0% |
AAAAAGTCAACAAGGGAAAA+TGG | - | chr1.1:71756715-71756734 | MS.gene066268:intron | 30.0% | |
AAACACCTAGATCAAGAAAA+AGG | - | chr1.1:71756529-71756548 | MS.gene066268:intron | 30.0% | |
AGTATTTCCTGAGAAATTGA+TGG | + | chr1.1:71756970-71756989 | None:intergenic | 30.0% | |
CCTCATATTGCAAAATACAT+TGG | - | chr1.1:71756330-71756349 | MS.gene066268:CDS | 30.0% | |
GGGTAAAAGATGTCAATAAT+TGG | + | chr1.1:71756260-71756279 | None:intergenic | 30.0% | |
TAGTATTATTTATGCCATGG+TGG | + | chr1.1:71756636-71756655 | None:intergenic | 30.0% | |
TATGGACAAAAACCCATTAA+AGG | - | chr1.1:71756791-71756810 | MS.gene066268:intron | 30.0% | |
TATTGAACCATCAATTTCTC+AGG | - | chr1.1:71756960-71756979 | MS.gene066268:CDS | 30.0% | |
TCAACAGAAAAAGTCAACAA+GGG | - | chr1.1:71756708-71756727 | MS.gene066268:intron | 30.0% | |
TTAGAGTTATATCTGTACCT+TGG | + | chr1.1:71756827-71756846 | None:intergenic | 30.0% | |
TTCAACAGAAAAAGTCAACA+AGG | - | chr1.1:71756707-71756726 | MS.gene066268:intron | 30.0% | |
! | ATGTATTTTGCAATATGAGG+AGG | + | chr1.1:71756330-71756349 | None:intergenic | 30.0% |
! | ATTTTCTGTTGTGGATGTAT+TGG | + | chr1.1:71756109-71756128 | None:intergenic | 30.0% |
! | CCAATGTATTTTGCAATATG+AGG | + | chr1.1:71756333-71756352 | None:intergenic | 30.0% |
! | GAAATTGAAACTGATGATGA+TGG | - | chr1.1:71757296-71757315 | MS.gene066268:CDS | 30.0% |
! | GGTAAATGAATTTTCTGTTG+TGG | + | chr1.1:71756118-71756137 | None:intergenic | 30.0% |
! | GTTGTTGTAATTGTTGGTTA+TGG | + | chr1.1:71756446-71756465 | None:intergenic | 30.0% |
! | TACTACCTTTTTCTTGATCT+AGG | + | chr1.1:71756537-71756556 | None:intergenic | 30.0% |
! | TCTGTTGTTGTTGTAATTGT+TGG | + | chr1.1:71756452-71756471 | None:intergenic | 30.0% |
! | TGTATTTTGCAATATGAGGA+GGG | + | chr1.1:71756329-71756348 | None:intergenic | 30.0% |
!! | GTTGACTTTTTCTGTTGAAT+AGG | + | chr1.1:71756706-71756725 | None:intergenic | 30.0% |
AGACGTAGTGTCAAATCTTT+CGG | + | chr1.1:71756883-71756902 | None:intergenic | 35.0% | |
AGATGGTATAGTATTTGTCG+TGG | + | chr1.1:71756139-71756158 | None:intergenic | 35.0% | |
ATAACCTCTCAACAGATTTG+TGG | - | chr1.1:71756756-71756775 | MS.gene066268:intron | 35.0% | |
ATGTTCACTGTGACATATAC+AGG | - | chr1.1:71757098-71757117 | MS.gene066268:CDS | 35.0% | |
GAAGTTTCTTGCACAAAATG+AGG | + | chr1.1:71756402-71756421 | None:intergenic | 35.0% | |
GAATATGTTGAAGCTAGAAG+TGG | + | chr1.1:71756424-71756443 | None:intergenic | 35.0% | |
GTTATAGGTTGCACTACATT+AGG | + | chr1.1:71756216-71756235 | None:intergenic | 35.0% | |
GTTTAGATCTTGAAGCTCAT+TGG | + | chr1.1:71756238-71756257 | None:intergenic | 35.0% | |
TAACCTCTCAACAGATTTGT+GGG | - | chr1.1:71756757-71756776 | MS.gene066268:intron | 35.0% | |
TATAGATGTAGCAGTTCCAA+AGG | - | chr1.1:71757029-71757048 | MS.gene066268:CDS | 35.0% | |
TCTTCTTCACCAAAAGAGTT+TGG | + | chr1.1:71757260-71757279 | None:intergenic | 35.0% | |
TTACATACATAAAGCCACCA+TGG | - | chr1.1:71756619-71756638 | MS.gene066268:CDS | 35.0% | |
TTAGAAGAGGAAATGGAAGA+TGG | + | chr1.1:71756156-71756175 | None:intergenic | 35.0% | |
TTATATCTGTACCTTGGATG+TGG | + | chr1.1:71756821-71756840 | None:intergenic | 35.0% | |
TTTCTTGATCTAGGTGTTTG+AGG | + | chr1.1:71756528-71756547 | None:intergenic | 35.0% | |
! | GTATTTTGCAATATGAGGAG+GGG | + | chr1.1:71756328-71756347 | None:intergenic | 35.0% |
! | TCTTGAAGCTCATTGGTTAT+AGG | + | chr1.1:71756231-71756250 | None:intergenic | 35.0% |
! | TGTTTAGCACCAAACTCTTT+TGG | - | chr1.1:71757248-71757267 | MS.gene066268:CDS | 35.0% |
!! | AAAAGAGTTTGGTGCTAAAC+AGG | + | chr1.1:71757249-71757268 | None:intergenic | 35.0% |
AAAATGAGGCCAAATGGAAG+AGG | + | chr1.1:71756388-71756407 | None:intergenic | 40.0% | |
AAATGGAAGAGGAAGTGGTA+GGG | + | chr1.1:71756377-71756396 | None:intergenic | 40.0% | |
ACTATGACCACTAGTAGTAG+TGG | + | chr1.1:71756292-71756311 | None:intergenic | 40.0% | |
ATCTGTTGAGAGGTTATCTG+CGG | + | chr1.1:71756753-71756772 | None:intergenic | 40.0% | |
CAAGAAGAAGTTGAGCTGTT+GGG | + | chr1.1:71757224-71757243 | None:intergenic | 40.0% | |
GGATGTGGAGAACCTTTAAT+GGG | + | chr1.1:71756806-71756825 | None:intergenic | 40.0% | |
TGACTAGAAATTGAGGTGGT+CGG | + | chr1.1:71757200-71757219 | None:intergenic | 40.0% | |
TGGATGTGGAGAACCTTTAA+TGG | + | chr1.1:71756807-71756826 | None:intergenic | 40.0% | |
TTAAAGGTTCTCCACATCCA+AGG | - | chr1.1:71756807-71756826 | MS.gene066268:intron | 40.0% | |
TTCTGTTGTGGATGTATTGG+TGG | + | chr1.1:71756106-71756125 | None:intergenic | 40.0% | |
TTGCACAAAATGAGGCCAAA+TGG | + | chr1.1:71756394-71756413 | None:intergenic | 40.0% | |
! | CTCTTTTGGTGAAGAAGAAG+AGG | - | chr1.1:71757262-71757281 | MS.gene066268:CDS | 40.0% |
!! | GTTGGGTTGACTAGAAATTG+AGG | + | chr1.1:71757207-71757226 | None:intergenic | 40.0% |
AAGTACACGAACCAAGTCTC+CGG | - | chr1.1:71757166-71757185 | MS.gene066268:CDS | 45.0% | |
ACCACTAGTAGTAGTGGTGA+TGG | + | chr1.1:71756286-71756305 | None:intergenic | 45.0% | |
ACCATCACCACTACTACTAG+TGG | - | chr1.1:71756282-71756301 | MS.gene066268:CDS | 45.0% | |
AGAAGAAGAGGACATCGACA+TGG | - | chr1.1:71757274-71757293 | MS.gene066268:CDS | 45.0% | |
AGAGGTTATCTGCGGTTACA+TGG | + | chr1.1:71756745-71756764 | None:intergenic | 45.0% | |
AGGAAGTGGTAGGGACAAAA+TGG | + | chr1.1:71756368-71756387 | None:intergenic | 45.0% | |
ATGCCCACAAATCTGTTGAG+AGG | + | chr1.1:71756763-71756782 | None:intergenic | 45.0% | |
CAAATGGAAGAGGAAGTGGT+AGG | + | chr1.1:71756378-71756397 | None:intergenic | 45.0% | |
CTACCACTTCCTCTTCCATT+TGG | - | chr1.1:71756376-71756395 | MS.gene066268:intron | 45.0% | |
GCAAGAAGAAGTTGAGCTGT+TGG | + | chr1.1:71757225-71757244 | None:intergenic | 45.0% | |
GCAATATGAGGAGGGGAATT+GGG | + | chr1.1:71756321-71756340 | None:intergenic | 45.0% | |
GGGTTGACTAGAAATTGAGG+TGG | + | chr1.1:71757204-71757223 | None:intergenic | 45.0% | |
TCTCAACAGATTTGTGGGCA+TGG | - | chr1.1:71756762-71756781 | MS.gene066268:intron | 45.0% | |
TGATTGGCAGCTTCGAACTA+TGG | + | chr1.1:71756082-71756101 | None:intergenic | 45.0% | |
TGCAATATGAGGAGGGGAAT+TGG | + | chr1.1:71756322-71756341 | None:intergenic | 45.0% | |
TTGTGGGCATGGCGAAAATA+TGG | - | chr1.1:71756773-71756792 | MS.gene066268:intron | 45.0% | |
! | AGACTTGGTTCGTGTACTTC+CGG | + | chr1.1:71757165-71757184 | None:intergenic | 45.0% |
! | TGGATGTATTGGTGGCTGAT+TGG | + | chr1.1:71756098-71756117 | None:intergenic | 45.0% |
! | TGTTTGAGGCTGGATGCTTT+GGG | + | chr1.1:71756514-71756533 | None:intergenic | 45.0% |
! | TTGATCTAGGTGTTTGAGGC+TGG | + | chr1.1:71756524-71756543 | None:intergenic | 45.0% |
!! | ACTAGTAGTAGTGGTGATGG+TGG | + | chr1.1:71756283-71756302 | None:intergenic | 45.0% |
!! | CTAGTAGTAGTGGTGATGGT+GGG | + | chr1.1:71756282-71756301 | None:intergenic | 45.0% |
!! | TAGTAGTAGTGGTGATGGTG+GGG | + | chr1.1:71756281-71756300 | None:intergenic | 45.0% |
ACCATGCAAGACCTACCCAT+CGG | - | chr1.1:71757129-71757148 | MS.gene066268:CDS | 50.0% | |
AGGCCAAATGGAAGAGGAAG+TGG | + | chr1.1:71756382-71756401 | None:intergenic | 50.0% | |
! | CCTTTCAACTTGCTTTCGCG+CGG | + | chr1.1:71757060-71757079 | None:intergenic | 50.0% |
! | GTGTTTGAGGCTGGATGCTT+TGG | + | chr1.1:71756515-71756534 | None:intergenic | 50.0% |
! | GTTTGAGGCTGGATGCTTTG+GGG | + | chr1.1:71756513-71756532 | None:intergenic | 50.0% |
!! | AGTAGTAGTGGTGATGGTGG+GGG | + | chr1.1:71756280-71756299 | None:intergenic | 50.0% |
CTTTCGCGCGGTACAACCTT+TGG | + | chr1.1:71757048-71757067 | None:intergenic | 55.0% | |
TCCGATGGGTAGGTCTTGCA+TGG | + | chr1.1:71757133-71757152 | None:intergenic | 55.0% | |
! | CCGCGCGAAAGCAAGTTGAA+AGG | - | chr1.1:71757057-71757076 | MS.gene066268:CDS | 55.0% |
ACCCATCGGAACTCGCTAGC+CGG | - | chr1.1:71757143-71757162 | MS.gene066268:CDS | 60.0% | |
CGGATGTGTCACCGGAGACT+TGG | + | chr1.1:71757180-71757199 | None:intergenic | 60.0% | |
GAGGTGGTCGGATGTGTCAC+CGG | + | chr1.1:71757188-71757207 | None:intergenic | 60.0% | |
GCTAGCGAGTTCCGATGGGT+AGG | + | chr1.1:71757143-71757162 | None:intergenic | 60.0% | |
TCCGGCTAGCGAGTTCCGAT+GGG | + | chr1.1:71757147-71757166 | None:intergenic | 60.0% | |
TTCCGGCTAGCGAGTTCCGA+TGG | + | chr1.1:71757148-71757167 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 71756054 | 71757346 | 71756054 | ID=MS.gene066268 |
chr1.1 | mRNA | 71756054 | 71757346 | 71756054 | ID=MS.gene066268.t1;Parent=MS.gene066268 |
chr1.1 | exon | 71756850 | 71757346 | 71756850 | ID=MS.gene066268.t1.exon1;Parent=MS.gene066268.t1 |
chr1.1 | CDS | 71756850 | 71757346 | 71756850 | ID=cds.MS.gene066268.t1;Parent=MS.gene066268.t1 |
chr1.1 | exon | 71756572 | 71756685 | 71756572 | ID=MS.gene066268.t1.exon2;Parent=MS.gene066268.t1 |
chr1.1 | CDS | 71756572 | 71756685 | 71756572 | ID=cds.MS.gene066268.t1;Parent=MS.gene066268.t1 |
chr1.1 | exon | 71756054 | 71756378 | 71756054 | ID=MS.gene066268.t1.exon3;Parent=MS.gene066268.t1 |
chr1.1 | CDS | 71756054 | 71756378 | 71756054 | ID=cds.MS.gene066268.t1;Parent=MS.gene066268.t1 |
Gene Sequence |
Protein sequence |