Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066481.t1 | AET03563.1 | 83.5 | 242 | 35 | 4 | 1 | 238 | 1 | 241 | 1.80E-105 | 392.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066481.t1 | Q8S9H7 | 40.0 | 60 | 36 | 0 | 85 | 144 | 119 | 178 | 1.5e-07 | 58.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066481.t1 | G7L8M9 | 83.5 | 242 | 35 | 4 | 1 | 238 | 1 | 241 | 1.3e-105 | 392.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene066481.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066481.t1 | MTR_8g072990 | 87.603 | 242 | 25 | 4 | 1 | 238 | 1 | 241 | 2.04e-137 | 385 |
| MS.gene066481.t1 | MTR_6g043490 | 62.651 | 249 | 64 | 6 | 1 | 239 | 1 | 230 | 3.54e-89 | 263 |
| MS.gene066481.t1 | MTR_6g043480 | 61.044 | 249 | 68 | 7 | 1 | 239 | 1 | 230 | 5.07e-84 | 250 |
| MS.gene066481.t1 | MTR_8g073050 | 52.632 | 247 | 86 | 9 | 1 | 239 | 1 | 224 | 6.12e-53 | 171 |
| MS.gene066481.t1 | MTR_8g063870 | 50.000 | 56 | 25 | 1 | 92 | 147 | 89 | 141 | 3.65e-12 | 64.7 |
| MS.gene066481.t1 | MTR_5g027570 | 44.444 | 54 | 30 | 0 | 93 | 146 | 87 | 140 | 4.44e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066481.t1 | AT5G08520 | 41.509 | 53 | 31 | 0 | 95 | 147 | 115 | 167 | 7.79e-11 | 61.2 |
Find 76 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGATAGGTTGGAACAAT+AGG | 0.309921 | 8.2:-31296909 | None:intergenic |
| AGTTGATTTGGAACTTCGTT+TGG | 0.333131 | 8.2:+31297022 | MS.gene066481:CDS |
| TATTTGTGATGGGGATGATT+AGG | 0.340678 | 8.2:+31296655 | MS.gene066481:CDS |
| CCTATTGTTCCAACCTATCA+TGG | 0.371126 | 8.2:+31296909 | MS.gene066481:CDS |
| GCTAGCTTCTCCTCCATGAT+AGG | 0.377201 | 8.2:-31296922 | None:intergenic |
| GATGAAGATATGGGTATTGA+TGG | 0.385170 | 8.2:-31295720 | None:intergenic |
| TGGTGCAACAGATGAAGATA+TGG | 0.391943 | 8.2:-31295730 | None:intergenic |
| TGTATTAGTTTATTTGTGAT+GGG | 0.392456 | 8.2:+31296645 | MS.gene066481:intron |
| TGGTGTTGGTGGTGAAGATT+AGG | 0.399314 | 8.2:-31295780 | None:intergenic |
| AATTGGTAGTGATCATTTGA+TGG | 0.403530 | 8.2:-31295842 | None:intergenic |
| TTGTATTAGTTTATTTGTGA+TGG | 0.403857 | 8.2:+31296644 | MS.gene066481:intron |
| GAGCTGATGGTAAGGTAGTT+TGG | 0.407255 | 8.2:-31295800 | None:intergenic |
| GTTGATTTGGAACTTCGTTT+GGG | 0.424734 | 8.2:+31297023 | MS.gene066481:CDS |
| GAAAAGAGTGAGAGTTTCCT+TGG | 0.431034 | 8.2:-31296886 | None:intergenic |
| GAATCAAAATTATGTATCAT+TGG | 0.435669 | 8.2:-31295750 | None:intergenic |
| GCTATGCTACTAGCTTCTTC+AGG | 0.450363 | 8.2:+31296748 | MS.gene066481:CDS |
| TGGTGTTGGAGGAGTTGATT+TGG | 0.461131 | 8.2:+31297010 | MS.gene066481:CDS |
| GTCGGAGAACCCTAGCAATT+CGG | 0.462131 | 8.2:-31295893 | None:intergenic |
| AGTCCTTCTGCTGGTGTTGG+AGG | 0.463490 | 8.2:+31296999 | MS.gene066481:CDS |
| AAAGAAAATATGATTCCAAC+GGG | 0.468490 | 8.2:+31296802 | MS.gene066481:CDS |
| GTAAGGTAGTTTGGTGTTGG+TGG | 0.469673 | 8.2:-31295791 | None:intergenic |
| ATGGTAAGGTAGTTTGGTGT+TGG | 0.479447 | 8.2:-31295794 | None:intergenic |
| CATGATAGGTTGGAACAATA+GGG | 0.479685 | 8.2:-31296908 | None:intergenic |
| CGTAGTCCTTCTGCTGGTGT+TGG | 0.483014 | 8.2:+31296996 | MS.gene066481:CDS |
| AAACCATGCACATATTCGTC+TGG | 0.484730 | 8.2:-31296777 | None:intergenic |
| TGCCATTCCCAAGTGGATCT+AGG | 0.486137 | 8.2:+31295937 | MS.gene066481:CDS |
| TTAGGTATGGACAAGGGAGA+TGG | 0.490096 | 8.2:+31296673 | MS.gene066481:CDS |
| AGTGCTTGCTTCATAGTTGT+TGG | 0.490843 | 8.2:-31296961 | None:intergenic |
| AGAGTGAGAGTTTCCTTGGC+AGG | 0.497435 | 8.2:-31296882 | None:intergenic |
| ACTACCAATTGTCCTCAATC+TGG | 0.500572 | 8.2:+31295855 | MS.gene066481:CDS |
| GAAGATATGGGTATTGATGG+AGG | 0.506856 | 8.2:-31295717 | None:intergenic |
| GATCTAGGCACATGGTGTCT+TGG | 0.508481 | 8.2:+31295952 | MS.gene066481:CDS |
| CCACCATGTGTGCCAGATTG+AGG | 0.508768 | 8.2:-31295867 | None:intergenic |
| AATGGCATGGTGTTTGATCC+TGG | 0.510899 | 8.2:-31295921 | None:intergenic |
| AGATATGGGTATTGATGGAG+GGG | 0.512610 | 8.2:-31295715 | None:intergenic |
| GCATAGCTTTGAACTTGTTG+TGG | 0.515534 | 8.2:-31296732 | None:intergenic |
| AGGGTTCTCCGACCGTTACC+AGG | 0.518804 | 8.2:+31295903 | MS.gene066481:CDS |
| ATGGTGGTAGCCGAATTGCT+AGG | 0.528512 | 8.2:+31295883 | MS.gene066481:CDS |
| AAAAGAAAATATGATTCCAA+CGG | 0.530318 | 8.2:+31296801 | MS.gene066481:CDS |
| AAGATATGGGTATTGATGGA+GGG | 0.533718 | 8.2:-31295716 | None:intergenic |
| TGTGCCAGATTGAGGACAAT+TGG | 0.536061 | 8.2:-31295859 | None:intergenic |
| TGGTCGTGTCCTTGAGCTGA+TGG | 0.542418 | 8.2:-31295813 | None:intergenic |
| ACTCTGCGTAGTCCTTCTGC+TGG | 0.546659 | 8.2:+31296990 | MS.gene066481:CDS |
| AAGGAAGTATGTAAGATCAA+TGG | 0.547109 | 8.2:-31295688 | None:intergenic |
| TGCCTAGATCCACTTGGGAA+TGG | 0.547210 | 8.2:-31295939 | None:intergenic |
| GTATTGATGGAGGGGAGTCA+AGG | 0.547727 | 8.2:-31295707 | None:intergenic |
| GTGTCCTTGAGCTGATGGTA+AGG | 0.551347 | 8.2:-31295808 | None:intergenic |
| GCTTCTCCTCCATGATAGGT+TGG | 0.551374 | 8.2:-31296918 | None:intergenic |
| TGTCCTCAATCTGGCACACA+TGG | 0.551871 | 8.2:+31295864 | MS.gene066481:CDS |
| ATTGGTAGTGATCATTTGAT+GGG | 0.557560 | 8.2:-31295841 | None:intergenic |
| GTATTAGTTTATTTGTGATG+GGG | 0.567565 | 8.2:+31296646 | MS.gene066481:intron |
| GGTGCAACAGATGAAGATAT+GGG | 0.573397 | 8.2:-31295729 | None:intergenic |
| TGGTGGTAGCCGAATTGCTA+GGG | 0.578734 | 8.2:+31295884 | MS.gene066481:CDS |
| GTGATGGGGATGATTAGGTA+TGG | 0.581299 | 8.2:+31296660 | MS.gene066481:CDS |
| AGAAGGACTACGCAGAGTCA+TGG | 0.582481 | 8.2:-31296985 | None:intergenic |
| GTAAGATCAATGGTCTCCAT+AGG | 0.586191 | 8.2:-31295678 | None:intergenic |
| ACTCCTCCAACACCAGCAGA+AGG | 0.596491 | 8.2:-31297002 | None:intergenic |
| TGATCATTTGATGGGACTGA+TGG | 0.601219 | 8.2:-31295833 | None:intergenic |
| CCCAAGTGGATCTAGGCACA+TGG | 0.602457 | 8.2:+31295944 | MS.gene066481:CDS |
| CATGCACATATTCGTCTGGT+AGG | 0.603146 | 8.2:-31296773 | None:intergenic |
| TTCTGACGATGATCCTGCCA+AGG | 0.606818 | 8.2:+31296869 | MS.gene066481:CDS |
| ACCATGTGCCTAGATCCACT+TGG | 0.620902 | 8.2:-31295945 | None:intergenic |
| TTGGTGGTGAAGATTAGGAT+CGG | 0.625676 | 8.2:-31295775 | None:intergenic |
| AGATCCACTTGGGAATGGCA+TGG | 0.630755 | 8.2:-31295934 | None:intergenic |
| CCATGTGCCTAGATCCACTT+GGG | 0.631806 | 8.2:-31295944 | None:intergenic |
| GGATGATGAGTTGATCCCGT+TGG | 0.634114 | 8.2:-31296817 | None:intergenic |
| ATGGTGTTTGATCCTGGTAA+CGG | 0.649197 | 8.2:-31295915 | None:intergenic |
| ACTACCTTACCATCAGCTCA+AGG | 0.650911 | 8.2:+31295804 | MS.gene066481:CDS |
| TGTTTGATCCTGGTAACGGT+CGG | 0.653269 | 8.2:-31295911 | None:intergenic |
| CCTCAATCTGGCACACATGG+TGG | 0.654479 | 8.2:+31295867 | MS.gene066481:CDS |
| AACACCATGCCATTCCCAAG+TGG | 0.655209 | 8.2:+31295930 | MS.gene066481:CDS |
| GGGATGATTAGGTATGGACA+AGG | 0.664435 | 8.2:+31296666 | MS.gene066481:CDS |
| CTACCAGACGAATATGTGCA+TGG | 0.669323 | 8.2:+31296774 | MS.gene066481:CDS |
| ATGCATTGAATAATATGAAG+CGG | 0.673343 | 8.2:-31296838 | None:intergenic |
| GGATGATTAGGTATGGACAA+GGG | 0.676501 | 8.2:+31296667 | MS.gene066481:CDS |
| ATTGTTCCAACCTATCATGG+AGG | 0.738718 | 8.2:+31296912 | MS.gene066481:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAATGACAAATATTA+GGG | - | chr8.2:31296149-31296168 | None:intergenic | 10.0% |
| !! | TTAAAATAATGACAAATATT+AGG | - | chr8.2:31296150-31296169 | None:intergenic | 10.0% |
| !! | TATATTGACAAATTTATAGT+GGG | - | chr8.2:31296332-31296351 | None:intergenic | 15.0% |
| !! | TTATATTGACAAATTTATAG+TGG | - | chr8.2:31296333-31296352 | None:intergenic | 15.0% |
| !!! | ACATTATTTAATAACCTTTT+TGG | - | chr8.2:31296501-31296520 | None:intergenic | 15.0% |
| !!! | CATTATTTAATAACCTTTTT+GGG | - | chr8.2:31296500-31296519 | None:intergenic | 15.0% |
| !! | AAAAGAAAATATGATTCCAA+CGG | + | chr8.2:31296801-31296820 | MS.gene066481:CDS | 20.0% |
| !! | ATTAGGGAAAGAAAAAAATT+GGG | - | chr8.2:31296133-31296152 | None:intergenic | 20.0% |
| !! | GAATCAAAATTATGTATCAT+TGG | - | chr8.2:31295753-31295772 | None:intergenic | 20.0% |
| !! | TATTAGGGAAAGAAAAAAAT+TGG | - | chr8.2:31296134-31296153 | None:intergenic | 20.0% |
| !! | TATTATTCAATAACCTATGA+AGG | - | chr8.2:31296469-31296488 | None:intergenic | 20.0% |
| !!! | TGTATTAGTTTATTTGTGAT+GGG | + | chr8.2:31296645-31296664 | MS.gene066481:intron | 20.0% |
| !!! | TTGTATTAGTTTATTTGTGA+TGG | + | chr8.2:31296644-31296663 | MS.gene066481:intron | 20.0% |
| ! | AAAGAAAATATGATTCCAAC+GGG | + | chr8.2:31296802-31296821 | MS.gene066481:CDS | 25.0% |
| ! | ATAACCTATGAAGGTTTAAT+TGG | - | chr8.2:31296460-31296479 | None:intergenic | 25.0% |
| ! | ATGCATTGAATAATATGAAG+CGG | - | chr8.2:31296841-31296860 | None:intergenic | 25.0% |
| ! | TGTCAGAAAAGTTGAAATAA+TGG | - | chr8.2:31296222-31296241 | None:intergenic | 25.0% |
| ! | TTAGGGAAAGAAAAAAATTG+GGG | - | chr8.2:31296132-31296151 | None:intergenic | 25.0% |
| ! | TTCTGACAATGATATTCTTA+CGG | + | chr8.2:31296234-31296253 | MS.gene066481:intron | 25.0% |
| !! | GTATTAGTTTATTTGTGATG+GGG | + | chr8.2:31296646-31296665 | MS.gene066481:intron | 25.0% |
| ATCTCCAATTAAACCTTCAT+AGG | + | chr8.2:31296453-31296472 | MS.gene066481:intron | 30.0% | |
| TAATAAAGCTTTGCCCAAAA+AGG | + | chr8.2:31296484-31296503 | MS.gene066481:intron | 30.0% | |
| TTGAAATAATGGCCAATAAG+TGG | - | chr8.2:31296211-31296230 | None:intergenic | 30.0% | |
| ! | AAGGAAGTATGTAAGATCAA+TGG | - | chr8.2:31295691-31295710 | None:intergenic | 30.0% |
| !! | AATTGGTAGTGATCATTTGA+TGG | - | chr8.2:31295845-31295864 | None:intergenic | 30.0% |
| !! | ATTGGTAGTGATCATTTGAT+GGG | - | chr8.2:31295844-31295863 | None:intergenic | 30.0% |
| CTCATTTCTACTCCACTTAT+TGG | + | chr8.2:31296196-31296215 | MS.gene066481:intron | 35.0% | |
| ! | CATGATAGGTTGGAACAATA+GGG | - | chr8.2:31296911-31296930 | None:intergenic | 35.0% |
| ! | TATTTGTGATGGGGATGATT+AGG | + | chr8.2:31296655-31296674 | MS.gene066481:CDS | 35.0% |
| !! | AAGATATGGGTATTGATGGA+GGG | - | chr8.2:31295719-31295738 | None:intergenic | 35.0% |
| !! | AGTTGATTTGGAACTTCGTT+TGG | + | chr8.2:31297022-31297041 | MS.gene066481:CDS | 35.0% |
| !! | GATGAAGATATGGGTATTGA+TGG | - | chr8.2:31295723-31295742 | None:intergenic | 35.0% |
| !! | GTTGATTTGGAACTTCGTTT+GGG | + | chr8.2:31297023-31297042 | MS.gene066481:CDS | 35.0% |
| AAACCATGCACATATTCGTC+TGG | - | chr8.2:31296780-31296799 | None:intergenic | 40.0% | |
| ACTACCAATTGTCCTCAATC+TGG | + | chr8.2:31295855-31295874 | MS.gene066481:CDS | 40.0% | |
| AGTGCTTGCTTCATAGTTGT+TGG | - | chr8.2:31296964-31296983 | None:intergenic | 40.0% | |
| ATGGTGTTTGATCCTGGTAA+CGG | - | chr8.2:31295918-31295937 | None:intergenic | 40.0% | |
| ATTGTTCCAACCTATCATGG+AGG | + | chr8.2:31296912-31296931 | MS.gene066481:CDS | 40.0% | |
| CCTATTGTTCCAACCTATCA+TGG | + | chr8.2:31296909-31296928 | MS.gene066481:CDS | 40.0% | |
| GAAAAGAGTGAGAGTTTCCT+TGG | - | chr8.2:31296889-31296908 | None:intergenic | 40.0% | |
| GGATGATTAGGTATGGACAA+GGG | + | chr8.2:31296667-31296686 | MS.gene066481:CDS | 40.0% | |
| GGTGCAACAGATGAAGATAT+GGG | - | chr8.2:31295732-31295751 | None:intergenic | 40.0% | |
| GTAAGATCAATGGTCTCCAT+AGG | - | chr8.2:31295681-31295700 | None:intergenic | 40.0% | |
| TGATCATTTGATGGGACTGA+TGG | - | chr8.2:31295836-31295855 | None:intergenic | 40.0% | |
| TGGTGCAACAGATGAAGATA+TGG | - | chr8.2:31295733-31295752 | None:intergenic | 40.0% | |
| ! | CCATGATAGGTTGGAACAAT+AGG | - | chr8.2:31296912-31296931 | None:intergenic | 40.0% |
| !! | AGATATGGGTATTGATGGAG+GGG | - | chr8.2:31295718-31295737 | None:intergenic | 40.0% |
| !! | ATGGTAAGGTAGTTTGGTGT+TGG | - | chr8.2:31295797-31295816 | None:intergenic | 40.0% |
| !! | GAAGATATGGGTATTGATGG+AGG | - | chr8.2:31295720-31295739 | None:intergenic | 40.0% |
| !! | GCATAGCTTTGAACTTGTTG+TGG | - | chr8.2:31296735-31296754 | None:intergenic | 40.0% |
| !! | TTGGTGGTGAAGATTAGGAT+CGG | - | chr8.2:31295778-31295797 | None:intergenic | 40.0% |
| AATGGCATGGTGTTTGATCC+TGG | - | chr8.2:31295924-31295943 | None:intergenic | 45.0% | |
| ACTACCTTACCATCAGCTCA+AGG | + | chr8.2:31295804-31295823 | MS.gene066481:CDS | 45.0% | |
| CATGCACATATTCGTCTGGT+AGG | - | chr8.2:31296776-31296795 | None:intergenic | 45.0% | |
| CTACCAGACGAATATGTGCA+TGG | + | chr8.2:31296774-31296793 | MS.gene066481:CDS | 45.0% | |
| GAGCTGATGGTAAGGTAGTT+TGG | - | chr8.2:31295803-31295822 | None:intergenic | 45.0% | |
| GGGATGATTAGGTATGGACA+AGG | + | chr8.2:31296666-31296685 | MS.gene066481:CDS | 45.0% | |
| TGTGCCAGATTGAGGACAAT+TGG | - | chr8.2:31295862-31295881 | None:intergenic | 45.0% | |
| TTAGGTATGGACAAGGGAGA+TGG | + | chr8.2:31296673-31296692 | MS.gene066481:CDS | 45.0% | |
| ! | GCTATGCTACTAGCTTCTTC+AGG | + | chr8.2:31296748-31296767 | MS.gene066481:CDS | 45.0% |
| ! | GTGATGGGGATGATTAGGTA+TGG | + | chr8.2:31296660-31296679 | MS.gene066481:CDS | 45.0% |
| ! | TGGTGTTGGAGGAGTTGATT+TGG | + | chr8.2:31297010-31297029 | MS.gene066481:CDS | 45.0% |
| !! | GTAAGGTAGTTTGGTGTTGG+TGG | - | chr8.2:31295794-31295813 | None:intergenic | 45.0% |
| !! | TGGTGTTGGTGGTGAAGATT+AGG | - | chr8.2:31295783-31295802 | None:intergenic | 45.0% |
| !! | TGTTTGATCCTGGTAACGGT+CGG | - | chr8.2:31295914-31295933 | None:intergenic | 45.0% |
| !! | AAAAAAAAAAATTAGATTTA+AGG | - | chr8.2:31296012-31296031 | None:intergenic | 5.0% |
| !!! | AATTTAAATTTCAAATTTTA+AGG | - | chr8.2:31296548-31296567 | None:intergenic | 5.0% |
| AACACCATGCCATTCCCAAG+TGG | + | chr8.2:31295930-31295949 | MS.gene066481:CDS | 50.0% | |
| ACCATGTGCCTAGATCCACT+TGG | - | chr8.2:31295948-31295967 | None:intergenic | 50.0% | |
| AGAAGGACTACGCAGAGTCA+TGG | - | chr8.2:31296988-31297007 | None:intergenic | 50.0% | |
| AGAGTGAGAGTTTCCTTGGC+AGG | - | chr8.2:31296885-31296904 | None:intergenic | 50.0% | |
| AGATCCACTTGGGAATGGCA+TGG | - | chr8.2:31295937-31295956 | None:intergenic | 50.0% | |
| ATGGTGGTAGCCGAATTGCT+AGG | + | chr8.2:31295883-31295902 | MS.gene066481:CDS | 50.0% | |
| CCATGTGCCTAGATCCACTT+GGG | - | chr8.2:31295947-31295966 | None:intergenic | 50.0% | |
| GATCTAGGCACATGGTGTCT+TGG | + | chr8.2:31295952-31295971 | MS.gene066481:CDS | 50.0% | |
| GCTTCTCCTCCATGATAGGT+TGG | - | chr8.2:31296921-31296940 | None:intergenic | 50.0% | |
| GTCGGAGAACCCTAGCAATT+CGG | - | chr8.2:31295896-31295915 | None:intergenic | 50.0% | |
| GTGTCCTTGAGCTGATGGTA+AGG | - | chr8.2:31295811-31295830 | None:intergenic | 50.0% | |
| TGCCATTCCCAAGTGGATCT+AGG | + | chr8.2:31295937-31295956 | MS.gene066481:CDS | 50.0% | |
| TGCCTAGATCCACTTGGGAA+TGG | - | chr8.2:31295942-31295961 | None:intergenic | 50.0% | |
| TGGTGGTAGCCGAATTGCTA+GGG | + | chr8.2:31295884-31295903 | MS.gene066481:CDS | 50.0% | |
| TGTCCTCAATCTGGCACACA+TGG | + | chr8.2:31295864-31295883 | MS.gene066481:CDS | 50.0% | |
| TTCTGACGATGATCCTGCCA+AGG | + | chr8.2:31296869-31296888 | MS.gene066481:CDS | 50.0% | |
| ! | GCTAGCTTCTCCTCCATGAT+AGG | - | chr8.2:31296925-31296944 | None:intergenic | 50.0% |
| ! | GTATTGATGGAGGGGAGTCA+AGG | - | chr8.2:31295710-31295729 | None:intergenic | 50.0% |
| !! | GGATGATGAGTTGATCCCGT+TGG | - | chr8.2:31296820-31296839 | None:intergenic | 50.0% |
| ACTCCTCCAACACCAGCAGA+AGG | - | chr8.2:31297005-31297024 | None:intergenic | 55.0% | |
| ACTCTGCGTAGTCCTTCTGC+TGG | + | chr8.2:31296990-31297009 | MS.gene066481:CDS | 55.0% | |
| CCACCATGTGTGCCAGATTG+AGG | - | chr8.2:31295870-31295889 | None:intergenic | 55.0% | |
| CCCAAGTGGATCTAGGCACA+TGG | + | chr8.2:31295944-31295963 | MS.gene066481:CDS | 55.0% | |
| CCTCAATCTGGCACACATGG+TGG | + | chr8.2:31295867-31295886 | MS.gene066481:CDS | 55.0% | |
| CGTAGTCCTTCTGCTGGTGT+TGG | + | chr8.2:31296996-31297015 | MS.gene066481:CDS | 55.0% | |
| TGGTCGTGTCCTTGAGCTGA+TGG | - | chr8.2:31295816-31295835 | None:intergenic | 55.0% | |
| ! | AGTCCTTCTGCTGGTGTTGG+AGG | + | chr8.2:31296999-31297018 | MS.gene066481:CDS | 55.0% |
| AGGGTTCTCCGACCGTTACC+AGG | + | chr8.2:31295903-31295922 | MS.gene066481:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 31295675 | 31297055 | 31295675 | ID=MS.gene066481 |
| chr8.2 | mRNA | 31295675 | 31297055 | 31295675 | ID=MS.gene066481.t1;Parent=MS.gene066481 |
| chr8.2 | exon | 31295675 | 31295991 | 31295675 | ID=MS.gene066481.t1.exon1;Parent=MS.gene066481.t1 |
| chr8.2 | CDS | 31295675 | 31295991 | 31295675 | ID=cds.MS.gene066481.t1;Parent=MS.gene066481.t1 |
| chr8.2 | exon | 31296653 | 31297055 | 31296653 | ID=MS.gene066481.t1.exon2;Parent=MS.gene066481.t1 |
| chr8.2 | CDS | 31296653 | 31297055 | 31296653 | ID=cds.MS.gene066481.t1;Parent=MS.gene066481.t1 |
| Gene Sequence |
| Protein sequence |
