Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066485.t1 | XP_003629092.1 | 84.1 | 170 | 27 | 0 | 1 | 170 | 1 | 170 | 5.40E-75 | 290.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066485.t1 | Q8S9H7 | 52.1 | 48 | 23 | 0 | 103 | 150 | 132 | 179 | 9.8e-09 | 62.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066485.t1 | G7L8N4 | 84.1 | 170 | 27 | 0 | 1 | 170 | 1 | 170 | 3.9e-75 | 290.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene066485.t1 | TF | MYB-related |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066485.t1 | MTR_8g073050 | 90.625 | 224 | 20 | 1 | 1 | 224 | 1 | 223 | 3.19e-128 | 361 |
MS.gene066485.t1 | MTR_6g043480 | 59.483 | 232 | 83 | 6 | 1 | 224 | 1 | 229 | 2.00e-72 | 220 |
MS.gene066485.t1 | MTR_6g043490 | 60.515 | 233 | 79 | 6 | 1 | 224 | 1 | 229 | 9.89e-71 | 216 |
MS.gene066485.t1 | MTR_8g072990 | 54.183 | 251 | 80 | 8 | 1 | 225 | 1 | 242 | 2.09e-65 | 202 |
MS.gene066485.t1 | MTR_5g027570 | 40.580 | 69 | 41 | 0 | 98 | 166 | 87 | 155 | 6.77e-14 | 68.9 |
MS.gene066485.t1 | MTR_8g063870 | 31.387 | 137 | 77 | 3 | 87 | 212 | 65 | 195 | 1.87e-12 | 65.5 |
MS.gene066485.t1 | MTR_6g092540 | 32.787 | 122 | 64 | 2 | 103 | 224 | 97 | 200 | 3.60e-12 | 64.7 |
MS.gene066485.t1 | MTR_1g048660 | 41.333 | 75 | 40 | 1 | 104 | 174 | 13 | 87 | 4.73e-12 | 60.5 |
MS.gene066485.t1 | MTR_4g111975 | 47.170 | 53 | 28 | 0 | 100 | 152 | 135 | 187 | 6.86e-12 | 63.9 |
MS.gene066485.t1 | MTR_8g101650 | 49.020 | 51 | 26 | 0 | 103 | 153 | 105 | 155 | 1.41e-11 | 62.8 |
MS.gene066485.t1 | MTR_3g462790 | 50.000 | 48 | 24 | 0 | 103 | 150 | 147 | 194 | 1.78e-11 | 62.8 |
MS.gene066485.t1 | MTR_5g081860 | 50.000 | 48 | 24 | 0 | 103 | 150 | 125 | 172 | 1.85e-11 | 62.4 |
MS.gene066485.t1 | MTR_5g069710 | 50.000 | 48 | 24 | 0 | 103 | 150 | 132 | 179 | 1.93e-11 | 62.8 |
MS.gene066485.t1 | MTR_4g100630 | 44.262 | 61 | 34 | 0 | 90 | 150 | 82 | 142 | 2.07e-11 | 62.8 |
MS.gene066485.t1 | MTR_2g100930 | 52.083 | 48 | 23 | 0 | 103 | 150 | 109 | 156 | 2.64e-11 | 62.4 |
MS.gene066485.t1 | MTR_7g067080 | 32.632 | 95 | 63 | 1 | 57 | 150 | 93 | 187 | 3.54e-11 | 62.0 |
MS.gene066485.t1 | MTR_5g037080 | 47.917 | 48 | 25 | 0 | 103 | 150 | 102 | 149 | 5.63e-11 | 61.2 |
MS.gene066485.t1 | MTR_4g107230 | 45.000 | 60 | 26 | 1 | 97 | 149 | 71 | 130 | 6.50e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066485.t1 | AT3G16350 | 49.153 | 59 | 29 | 1 | 93 | 150 | 126 | 184 | 2.90e-12 | 65.5 |
MS.gene066485.t1 | AT5G05790 | 47.273 | 55 | 29 | 0 | 95 | 149 | 123 | 177 | 4.10e-12 | 64.3 |
MS.gene066485.t1 | AT5G05790 | 47.273 | 55 | 29 | 0 | 95 | 149 | 123 | 177 | 4.10e-12 | 64.3 |
MS.gene066485.t1 | AT5G58900 | 52.083 | 48 | 23 | 0 | 103 | 150 | 141 | 188 | 5.47e-12 | 64.3 |
MS.gene066485.t1 | AT1G49010 | 47.170 | 53 | 28 | 0 | 100 | 152 | 131 | 183 | 6.48e-12 | 64.3 |
MS.gene066485.t1 | AT2G38090 | 52.083 | 48 | 23 | 0 | 103 | 150 | 141 | 188 | 9.40e-12 | 63.5 |
MS.gene066485.t1 | AT5G08520 | 45.283 | 53 | 29 | 0 | 100 | 152 | 115 | 167 | 1.96e-11 | 62.8 |
MS.gene066485.t1 | AT5G61620 | 36.538 | 104 | 47 | 2 | 104 | 207 | 109 | 193 | 2.43e-11 | 62.4 |
MS.gene066485.t1 | AT1G19000 | 49.091 | 55 | 27 | 1 | 96 | 149 | 94 | 148 | 2.68e-11 | 62.0 |
MS.gene066485.t1 | AT1G19000 | 49.091 | 55 | 27 | 1 | 96 | 149 | 94 | 148 | 2.68e-11 | 62.0 |
MS.gene066485.t1 | AT3G11280 | 51.064 | 47 | 23 | 0 | 103 | 149 | 127 | 173 | 3.49e-11 | 61.6 |
MS.gene066485.t1 | AT3G11280 | 51.064 | 47 | 23 | 0 | 103 | 149 | 127 | 173 | 3.49e-11 | 61.6 |
MS.gene066485.t1 | AT5G01200 | 52.083 | 48 | 23 | 0 | 103 | 150 | 146 | 193 | 3.75e-11 | 61.6 |
Find 73 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATCATCTGCTCCATATTA+TGG | 0.239375 | 8.2:+31247528 | MS.gene066485:CDS |
GGTGTTGGTGGTGATGGATT+TGG | 0.296123 | 8.2:-31246572 | None:intergenic |
CTGCTAGCTTCTCCATAATA+TGG | 0.297489 | 8.2:-31247540 | None:intergenic |
TTTGAGAATTGGGATGTCTT+TGG | 0.303715 | 8.2:-31246714 | None:intergenic |
GCCTCGCTCCATTTGAGAAT+TGG | 0.304212 | 8.2:-31246725 | None:intergenic |
AATTGGGATGTCTTTGGTTC+AGG | 0.316369 | 8.2:-31246708 | None:intergenic |
AGTTGATTTGGAGCTTCGTT+TGG | 0.335545 | 8.2:+31247635 | MS.gene066485:CDS |
CTGATGGGGCTGATTGAGTA+TGG | 0.344517 | 8.2:+31247330 | MS.gene066485:CDS |
TCTCAAATGGAGCGAGGCTC+AGG | 0.345319 | 8.2:+31246730 | MS.gene066485:CDS |
GTTTAAGAACCGTTGCAATA+TGG | 0.362011 | 8.2:-31246680 | None:intergenic |
TAGAAACGGGAACAAAATTA+AGG | 0.365725 | 8.2:-31246530 | None:intergenic |
GGCCAACCGGTAGCGATTTG+TGG | 0.378121 | 8.2:-31246636 | None:intergenic |
GGTGTTGATGGAGGTGAGTC+AGG | 0.379440 | 8.2:-31246480 | None:intergenic |
CCTCGCTCCATTTGAGAATT+GGG | 0.384408 | 8.2:-31246724 | None:intergenic |
GCCAACCGGTAGCGATTTGT+GGG | 0.384621 | 8.2:-31246635 | None:intergenic |
TGGATTTGGTGGTGAAGATT+AGG | 0.385439 | 8.2:-31246558 | None:intergenic |
TGATGAGTTCCTGTTTCTCT+TGG | 0.391375 | 8.2:-31247511 | None:intergenic |
TAGTTTGGTGTTGGTGGTGA+TGG | 0.391425 | 8.2:-31246578 | None:intergenic |
CTCTTGGAAGCAGAGTTGTT+GGG | 0.392834 | 8.2:-31247495 | None:intergenic |
GGATTTGGTGGTGAAGATTA+GGG | 0.406181 | 8.2:-31246557 | None:intergenic |
GTCTCAAATCCTGGAGGTGG+TGG | 0.406567 | 8.2:-31246612 | None:intergenic |
GATAAAGATACAGGTGTTGA+TGG | 0.413209 | 8.2:-31246492 | None:intergenic |
TCTCTTGGAAGCAGAGTTGT+TGG | 0.416850 | 8.2:-31247496 | None:intergenic |
GTAAGATCAATGATCTCAAT+AGG | 0.418602 | 8.2:-31246450 | None:intergenic |
ACTCTGCTTCCAAGAGAAAC+AGG | 0.420387 | 8.2:+31247502 | MS.gene066485:CDS |
GTTGATTTGGAGCTTCGTTT+GGG | 0.430693 | 8.2:+31247636 | MS.gene066485:CDS |
GTGGTACAAACAAGGTAGTT+TGG | 0.433356 | 8.2:-31246593 | None:intergenic |
GCTGTGATACATGCCAGGTT+GGG | 0.443769 | 8.2:-31246658 | None:intergenic |
AAGATTAGGGTTGGTAGAAA+CGG | 0.455787 | 8.2:-31246544 | None:intergenic |
GGGCTGATTGAGTATGGAAA+AGG | 0.458465 | 8.2:+31247336 | MS.gene066485:CDS |
GATGTCTTTGGTTCAGGTAA+CGG | 0.466372 | 8.2:-31246702 | None:intergenic |
GAGCGAGGCTCAGGGTTCCT+TGG | 0.473725 | 8.2:+31246739 | MS.gene066485:CDS |
GTTGGTGGTGATGGATTTGG+TGG | 0.475694 | 8.2:-31246569 | None:intergenic |
CATGCCAGGTTGGGGCCAAC+CGG | 0.482475 | 8.2:-31246649 | None:intergenic |
ATTTGTGGGGTCTCAAATCC+TGG | 0.483100 | 8.2:-31246621 | None:intergenic |
TTGAGTATGGAAAAGGGAAA+TGG | 0.487269 | 8.2:+31247343 | MS.gene066485:CDS |
AGTGCTTGCTTCATAGTTGT+TGG | 0.490843 | 8.2:-31247574 | None:intergenic |
CCTAGTGCTTCTGCTGGTGA+TGG | 0.499343 | 8.2:+31247609 | MS.gene066485:CDS |
CCACAACAAGTTAAAAGCTA+TGG | 0.499837 | 8.2:+31247402 | MS.gene066485:CDS |
AGATTAGGGTTGGTAGAAAC+GGG | 0.501786 | 8.2:-31246543 | None:intergenic |
TGGTGATGGAGAAGTTGATT+TGG | 0.503382 | 8.2:+31247623 | MS.gene066485:CDS |
AAGACATCCCAATTCTCAAA+TGG | 0.506263 | 8.2:+31246717 | MS.gene066485:CDS |
GGTACATTAGATAAAGATAC+AGG | 0.519695 | 8.2:-31246501 | None:intergenic |
GGCTGTGATACATGCCAGGT+TGG | 0.522823 | 8.2:-31246659 | None:intergenic |
AGAAGCACTAGGCGGAGTCA+TGG | 0.531695 | 8.2:-31247598 | None:intergenic |
GGGGTCTCAAATCCTGGAGG+TGG | 0.536264 | 8.2:-31246615 | None:intergenic |
TTGTTTGTACCACCACCTCC+AGG | 0.546643 | 8.2:+31246603 | MS.gene066485:CDS |
ACAAGGTAGTTTGGTGTTGG+TGG | 0.546899 | 8.2:-31246584 | None:intergenic |
GGCTGATTGAGTATGGAAAA+GGG | 0.548425 | 8.2:+31247337 | MS.gene066485:CDS |
GGAACAAAATTAAGGATCGT+TGG | 0.550984 | 8.2:-31246522 | None:intergenic |
GCTACCGGTTGGCCCCAACC+TGG | 0.556164 | 8.2:+31246645 | MS.gene066485:CDS |
ACTCCGCCTAGTGCTTCTGC+TGG | 0.556890 | 8.2:+31247603 | MS.gene066485:CDS |
CCATCACCAGCAGAAGCACT+AGG | 0.558115 | 8.2:-31247609 | None:intergenic |
AAACCATGCACAAATGTGGC+TGG | 0.559050 | 8.2:-31247447 | None:intergenic |
CAAACAAGGTAGTTTGGTGT+TGG | 0.559413 | 8.2:-31246587 | None:intergenic |
CCTAAAACCATGCACAAATG+TGG | 0.569308 | 8.2:-31247451 | None:intergenic |
CTACCAGCCACATTTGTGCA+TGG | 0.576832 | 8.2:+31247444 | MS.gene066485:CDS |
CTGTGATACATGCCAGGTTG+GGG | 0.579442 | 8.2:-31246657 | None:intergenic |
TTGGTGGTGAAGATTAGGGT+TGG | 0.582165 | 8.2:-31246553 | None:intergenic |
GAGACCCCACAAATCGCTAC+CGG | 0.583399 | 8.2:+31246630 | MS.gene066485:CDS |
CTCAAATGGAGCGAGGCTCA+GGG | 0.584391 | 8.2:+31246731 | MS.gene066485:CDS |
CCCCACAAATCGCTACCGGT+TGG | 0.593856 | 8.2:+31246634 | MS.gene066485:CDS |
TCATGCTCTAATTGACTCCA+AGG | 0.607425 | 8.2:-31246756 | None:intergenic |
AAAGATACAGGTGTTGATGG+AGG | 0.610611 | 8.2:-31246489 | None:intergenic |
GTGTTGATGGAGGTGAGTCA+GGG | 0.619630 | 8.2:-31246479 | None:intergenic |
TGGAGGTGGTGGTACAAACA+AGG | 0.619969 | 8.2:-31246601 | None:intergenic |
ATATGGCTGTGATACATGCC+AGG | 0.626432 | 8.2:-31246663 | None:intergenic |
CATGCACAAATGTGGCTGGT+AGG | 0.633937 | 8.2:-31247443 | None:intergenic |
CCCAATTCTCAAATGGAGCG+AGG | 0.647781 | 8.2:+31246724 | MS.gene066485:CDS |
GTATCACAGCCATATTGCAA+CGG | 0.672262 | 8.2:+31246671 | MS.gene066485:CDS |
TGTGGGGTCTCAAATCCTGG+AGG | 0.683122 | 8.2:-31246618 | None:intergenic |
CCAACCGGTAGCGATTTGTG+GGG | 0.698088 | 8.2:-31246634 | None:intergenic |
TCACCAGCAGAAGCACTAGG+CGG | 0.753286 | 8.2:-31247606 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATTAGTCATTAAATT+TGG | - | chr8.2:31247127-31247146 | None:intergenic | 10.0% |
!! | AAATCAAGAGTAAAATTTAA+CGG | - | chr8.2:31247273-31247292 | None:intergenic | 15.0% |
!! | CAAAAATTAATCACTAAAAA+TGG | - | chr8.2:31246882-31246901 | None:intergenic | 15.0% |
!! | AAATTGCGATAAAAATTTAG+AGG | + | chr8.2:31246854-31246873 | MS.gene066485:intron | 20.0% |
!! | AATCAAGAGTAAAATTTAAC+GGG | - | chr8.2:31247272-31247291 | None:intergenic | 20.0% |
!! | ATAATCTATGAAAGAGTAAT+TGG | - | chr8.2:31247216-31247235 | None:intergenic | 20.0% |
!! | TCTAATTAAGTTTGTATGTA+AGG | + | chr8.2:31246803-31246822 | MS.gene066485:intron | 20.0% |
!! | TGTCAAAAAAATAATAACTG+CGG | - | chr8.2:31246928-31246947 | None:intergenic | 20.0% |
!!! | TATTTTAGCTTATTTCTGAT+GGG | + | chr8.2:31247315-31247334 | MS.gene066485:intron | 20.0% |
!!! | TTATTTTAGCTTATTTCTGA+TGG | + | chr8.2:31247314-31247333 | MS.gene066485:intron | 20.0% |
! | TTGAAATAGCCACAAAAATT+TGG | + | chr8.2:31247046-31247065 | MS.gene066485:intron | 25.0% |
!! | TTTCTTTCTCCAAATTTTTG+TGG | - | chr8.2:31247058-31247077 | None:intergenic | 25.0% |
!!! | ATTTTAGCTTATTTCTGATG+GGG | + | chr8.2:31247316-31247335 | MS.gene066485:intron | 25.0% |
AGAGAAAGTTGAAATAACTG+CGG | - | chr8.2:31246986-31247005 | None:intergenic | 30.0% | |
GGTACATTAGATAAAGATAC+AGG | - | chr8.2:31246504-31246523 | None:intergenic | 30.0% | |
GTAAGATCAATGATCTCAAT+AGG | - | chr8.2:31246453-31246472 | None:intergenic | 30.0% | |
TAGAAACGGGAACAAAATTA+AGG | - | chr8.2:31246533-31246552 | None:intergenic | 30.0% | |
AAATAACTGCGGATTTAGTG+AGG | - | chr8.2:31246975-31246994 | None:intergenic | 35.0% | |
AAGACATCCCAATTCTCAAA+TGG | + | chr8.2:31246717-31246736 | MS.gene066485:CDS | 35.0% | |
AAGGATCTCACTTTACTACT+GGG | + | chr8.2:31246822-31246841 | MS.gene066485:intron | 35.0% | |
CCACAACAAGTTAAAAGCTA+TGG | + | chr8.2:31247402-31247421 | MS.gene066485:CDS | 35.0% | |
GGAACAAAATTAAGGATCGT+TGG | - | chr8.2:31246525-31246544 | None:intergenic | 35.0% | |
GTTTAAGAACCGTTGCAATA+TGG | - | chr8.2:31246683-31246702 | None:intergenic | 35.0% | |
TAAGGATCTCACTTTACTAC+TGG | + | chr8.2:31246821-31246840 | MS.gene066485:intron | 35.0% | |
TCATCATCTGCTCCATATTA+TGG | + | chr8.2:31247528-31247547 | MS.gene066485:CDS | 35.0% | |
TTGAGTATGGAAAAGGGAAA+TGG | + | chr8.2:31247343-31247362 | MS.gene066485:CDS | 35.0% | |
TTTGAGAATTGGGATGTCTT+TGG | - | chr8.2:31246717-31246736 | None:intergenic | 35.0% | |
!! | AAGATTAGGGTTGGTAGAAA+CGG | - | chr8.2:31246547-31246566 | None:intergenic | 35.0% |
!! | GATAAAGATACAGGTGTTGA+TGG | - | chr8.2:31246495-31246514 | None:intergenic | 35.0% |
!!! | CCATAGCTTTTAACTTGTTG+TGG | - | chr8.2:31247405-31247424 | None:intergenic | 35.0% |
!!! | TTGTGCATGGTTTTAGGAAA+AGG | + | chr8.2:31247457-31247476 | MS.gene066485:CDS | 35.0% |
AGTGCTTGCTTCATAGTTGT+TGG | - | chr8.2:31247577-31247596 | None:intergenic | 40.0% | |
CCTAAAACCATGCACAAATG+TGG | - | chr8.2:31247454-31247473 | None:intergenic | 40.0% | |
GGCTGATTGAGTATGGAAAA+GGG | + | chr8.2:31247337-31247356 | MS.gene066485:CDS | 40.0% | |
GTATCACAGCCATATTGCAA+CGG | + | chr8.2:31246671-31246690 | MS.gene066485:CDS | 40.0% | |
GTGGTACAAACAAGGTAGTT+TGG | - | chr8.2:31246596-31246615 | None:intergenic | 40.0% | |
! | AATTGGGATGTCTTTGGTTC+AGG | - | chr8.2:31246711-31246730 | None:intergenic | 40.0% |
! | CCACATTTGTGCATGGTTTT+AGG | + | chr8.2:31247451-31247470 | MS.gene066485:CDS | 40.0% |
! | CTGCTAGCTTCTCCATAATA+TGG | - | chr8.2:31247543-31247562 | None:intergenic | 40.0% |
! | GATGTCTTTGGTTCAGGTAA+CGG | - | chr8.2:31246705-31246724 | None:intergenic | 40.0% |
! | TCATGCTCTAATTGACTCCA+AGG | - | chr8.2:31246759-31246778 | None:intergenic | 40.0% |
! | TGATGAGTTCCTGTTTCTCT+TGG | - | chr8.2:31247514-31247533 | None:intergenic | 40.0% |
!! | AAAGATACAGGTGTTGATGG+AGG | - | chr8.2:31246492-31246511 | None:intergenic | 40.0% |
!! | AGATTAGGGTTGGTAGAAAC+GGG | - | chr8.2:31246546-31246565 | None:intergenic | 40.0% |
!! | AGTTGATTTGGAGCTTCGTT+TGG | + | chr8.2:31247635-31247654 | MS.gene066485:CDS | 40.0% |
!! | CAAACAAGGTAGTTTGGTGT+TGG | - | chr8.2:31246590-31246609 | None:intergenic | 40.0% |
!! | GGATTTGGTGGTGAAGATTA+GGG | - | chr8.2:31246560-31246579 | None:intergenic | 40.0% |
!! | GTTGATTTGGAGCTTCGTTT+GGG | + | chr8.2:31247636-31247655 | MS.gene066485:CDS | 40.0% |
!! | TGGATTTGGTGGTGAAGATT+AGG | - | chr8.2:31246561-31246580 | None:intergenic | 40.0% |
!! | TGGTGATGGAGAAGTTGATT+TGG | + | chr8.2:31247623-31247642 | MS.gene066485:CDS | 40.0% |
AAACCATGCACAAATGTGGC+TGG | - | chr8.2:31247450-31247469 | None:intergenic | 45.0% | |
ACTCTGCTTCCAAGAGAAAC+AGG | + | chr8.2:31247502-31247521 | MS.gene066485:CDS | 45.0% | |
ATATGGCTGTGATACATGCC+AGG | - | chr8.2:31246666-31246685 | None:intergenic | 45.0% | |
ATTTGTGGGGTCTCAAATCC+TGG | - | chr8.2:31246624-31246643 | None:intergenic | 45.0% | |
CCTCGCTCCATTTGAGAATT+GGG | - | chr8.2:31246727-31246746 | None:intergenic | 45.0% | |
CTCTTGGAAGCAGAGTTGTT+GGG | - | chr8.2:31247498-31247517 | None:intergenic | 45.0% | |
GGGCTGATTGAGTATGGAAA+AGG | + | chr8.2:31247336-31247355 | MS.gene066485:CDS | 45.0% | |
TCTCTTGGAAGCAGAGTTGT+TGG | - | chr8.2:31247499-31247518 | None:intergenic | 45.0% | |
!! | ACAAGGTAGTTTGGTGTTGG+TGG | - | chr8.2:31246587-31246606 | None:intergenic | 45.0% |
!! | TAGTTTGGTGTTGGTGGTGA+TGG | - | chr8.2:31246581-31246600 | None:intergenic | 45.0% |
!! | TTGGTGGTGAAGATTAGGGT+TGG | - | chr8.2:31246556-31246575 | None:intergenic | 45.0% |
CATGCACAAATGTGGCTGGT+AGG | - | chr8.2:31247446-31247465 | None:intergenic | 50.0% | |
CCCAATTCTCAAATGGAGCG+AGG | + | chr8.2:31246724-31246743 | MS.gene066485:CDS | 50.0% | |
CTACCAGCCACATTTGTGCA+TGG | + | chr8.2:31247444-31247463 | MS.gene066485:CDS | 50.0% | |
CTGATGGGGCTGATTGAGTA+TGG | + | chr8.2:31247330-31247349 | MS.gene066485:CDS | 50.0% | |
CTGTGATACATGCCAGGTTG+GGG | - | chr8.2:31246660-31246679 | None:intergenic | 50.0% | |
GCCTCGCTCCATTTGAGAAT+TGG | - | chr8.2:31246728-31246747 | None:intergenic | 50.0% | |
GCTGTGATACATGCCAGGTT+GGG | - | chr8.2:31246661-31246680 | None:intergenic | 50.0% | |
TTGTTTGTACCACCACCTCC+AGG | + | chr8.2:31246603-31246622 | MS.gene066485:CDS | 50.0% | |
! | GTGTTGATGGAGGTGAGTCA+GGG | - | chr8.2:31246482-31246501 | None:intergenic | 50.0% |
! | TGGAGGTGGTGGTACAAACA+AGG | - | chr8.2:31246604-31246623 | None:intergenic | 50.0% |
!! | GGTGTTGGTGGTGATGGATT+TGG | - | chr8.2:31246575-31246594 | None:intergenic | 50.0% |
!! | GTTGGTGGTGATGGATTTGG+TGG | - | chr8.2:31246572-31246591 | None:intergenic | 50.0% |
CCAACCGGTAGCGATTTGTG+GGG | - | chr8.2:31246637-31246656 | None:intergenic | 55.0% | |
CCTAGTGCTTCTGCTGGTGA+TGG | + | chr8.2:31247609-31247628 | MS.gene066485:CDS | 55.0% | |
CTCAAATGGAGCGAGGCTCA+GGG | + | chr8.2:31246731-31246750 | MS.gene066485:CDS | 55.0% | |
GAGACCCCACAAATCGCTAC+CGG | + | chr8.2:31246630-31246649 | MS.gene066485:CDS | 55.0% | |
GCCAACCGGTAGCGATTTGT+GGG | - | chr8.2:31246638-31246657 | None:intergenic | 55.0% | |
GGCTGTGATACATGCCAGGT+TGG | - | chr8.2:31246662-31246681 | None:intergenic | 55.0% | |
GTCTCAAATCCTGGAGGTGG+TGG | - | chr8.2:31246615-31246634 | None:intergenic | 55.0% | |
TCTCAAATGGAGCGAGGCTC+AGG | + | chr8.2:31246730-31246749 | MS.gene066485:CDS | 55.0% | |
TGTGGGGTCTCAAATCCTGG+AGG | - | chr8.2:31246621-31246640 | None:intergenic | 55.0% | |
!! | AGAAGCACTAGGCGGAGTCA+TGG | - | chr8.2:31247601-31247620 | None:intergenic | 55.0% |
!! | CCATCACCAGCAGAAGCACT+AGG | - | chr8.2:31247612-31247631 | None:intergenic | 55.0% |
!! | GGTGTTGATGGAGGTGAGTC+AGG | - | chr8.2:31246483-31246502 | None:intergenic | 55.0% |
!! | TCACCAGCAGAAGCACTAGG+CGG | - | chr8.2:31247609-31247628 | None:intergenic | 55.0% |
ACTCCGCCTAGTGCTTCTGC+TGG | + | chr8.2:31247603-31247622 | MS.gene066485:CDS | 60.0% | |
CCCCACAAATCGCTACCGGT+TGG | + | chr8.2:31246634-31246653 | MS.gene066485:CDS | 60.0% | |
GGCCAACCGGTAGCGATTTG+TGG | - | chr8.2:31246639-31246658 | None:intergenic | 60.0% | |
GGGGTCTCAAATCCTGGAGG+TGG | - | chr8.2:31246618-31246637 | None:intergenic | 60.0% | |
GAGCGAGGCTCAGGGTTCCT+TGG | + | chr8.2:31246739-31246758 | MS.gene066485:CDS | 65.0% | |
! | CATGCCAGGTTGGGGCCAAC+CGG | - | chr8.2:31246652-31246671 | None:intergenic | 65.0% |
! | GCTACCGGTTGGCCCCAACC+TGG | + | chr8.2:31246645-31246664 | MS.gene066485:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 31246447 | 31247668 | 31246447 | ID=MS.gene066485 |
chr8.2 | mRNA | 31246447 | 31247668 | 31246447 | ID=MS.gene066485.t1;Parent=MS.gene066485 |
chr8.2 | exon | 31246447 | 31246778 | 31246447 | ID=MS.gene066485.t1.exon1;Parent=MS.gene066485.t1 |
chr8.2 | CDS | 31246447 | 31246778 | 31246447 | ID=cds.MS.gene066485.t1;Parent=MS.gene066485.t1 |
chr8.2 | exon | 31247323 | 31247668 | 31247323 | ID=MS.gene066485.t1.exon2;Parent=MS.gene066485.t1 |
chr8.2 | CDS | 31247323 | 31247668 | 31247323 | ID=cds.MS.gene066485.t1;Parent=MS.gene066485.t1 |
Gene Sequence |
Protein sequence |