AlfalfaGEDB | MS.gene066713

M. sativa cultivar XinJiangDaYe / MS.gene066713

KEGG: -
GO: GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0007165 GO:0008150 GO:0009987 GO:0035556 GO:0050789 GO:0050794 GO:0065007 GO:0097159 GO:1901363
PFAM: PF00072.27

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066713.t1	RHN59122.1	84.7	314	45	2	1	313	1	312	7.60E-144	520

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066713.t1	Q5N6V8	38.4	255	128	5	6	231	2	256	3.2e-42	173.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066713.t1	A0A396I0H3	84.7	314	45	2	1	313	1	312	5.5e-144	520.0

TFs/TRs:

Gene ID	Type	Classification
MS.gene066713.t1	TF	GARP-ARR-B

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066713.t1	MTR_4g021760	84.076	314	47	2	1	313	1	312	0.0	543
MS.gene066713.t1	MTR_4g021855	66.118	304	91	5	1	295	1	301	7.25e-138	392
MS.gene066713.t1	MTR_4g021845	85.388	219	30	1	1	219	1	217	3.04e-137	387
MS.gene066713.t1	MTR_4g021790	75.620	242	57	1	1	242	1	240	1.02e-128	368
MS.gene066713.t1	MTR_5g055260	60.173	231	63	5	1	231	1	202	2.95e-86	259
MS.gene066713.t1	MTR_4g023980	79.137	139	27	1	55	193	35	171	2.58e-74	226
MS.gene066713.t1	MTR_6g045327	45.752	306	143	9	1	296	1	293	3.01e-71	226
MS.gene066713.t1	MTR_1g032570	37.808	365	160	9	10	309	11	373	4.12e-68	224
MS.gene066713.t1	MTR_3g086100	40.316	253	118	5	10	231	13	263	2.17e-57	194
MS.gene066713.t1	MTR_8g079940	39.695	262	125	6	9	239	24	283	3.28e-56	190
MS.gene066713.t1	MTR_4g121020	38.868	265	133	4	10	248	31	292	7.12e-55	189
MS.gene066713.t1	MTR_2g034960	39.245	265	133	4	10	248	29	291	7.36e-55	188
MS.gene066713.t1	MTR_4g121020	38.868	265	133	4	10	248	31	292	7.91e-55	189
MS.gene066713.t1	MTR_8g105600	40.323	248	126	3	4	231	3	248	1.67e-53	184
MS.gene066713.t1	MTR_1g013170	39.200	250	118	4	7	226	2	247	2.20e-50	174
MS.gene066713.t1	MTR_4g131600	36.842	247	135	4	9	234	19	265	3.14e-48	170
MS.gene066713.t1	MTR_7g117705	36.090	266	142	4	7	244	2	267	3.94e-48	167
MS.gene066713.t1	MTR_8g093040	42.797	236	112	6	1	231	1	218	5.16e-48	162
MS.gene066713.t1	MTR_3g106220	37.652	247	124	3	10	226	8	254	1.52e-46	166
MS.gene066713.t1	MTR_1g013180	36.585	246	130	3	7	226	153	398	2.43e-44	160
MS.gene066713.t1	MTR_1g032570	33.987	306	136	8	68	309	1	304	4.25e-43	155
MS.gene066713.t1	MTR_4g131570	32.800	250	142	4	10	233	17	266	2.46e-42	154
MS.gene066713.t1	MTR_2g450070	34.510	255	132	4	10	229	18	272	2.63e-42	155
MS.gene066713.t1	MTR_2g450070	34.510	255	132	4	10	229	18	272	3.78e-42	154
MS.gene066713.t1	MTR_4g131580	33.065	248	143	4	9	233	16	263	6.76e-42	153
MS.gene066713.t1	MTR_6g016850	43.750	160	86	2	4	161	3	160	4.14e-41	141
MS.gene066713.t1	MTR_3g102590	38.140	215	104	4	10	222	8	195	4.73e-41	143
MS.gene066713.t1	MTR_3g102600	37.156	218	99	3	10	226	8	188	1.47e-39	139
MS.gene066713.t1	MTR_3g086100	39.691	194	85	4	68	231	1	192	5.46e-39	144
MS.gene066713.t1	MTR_3g102590	37.264	212	104	4	10	219	8	192	1.26e-38	135
MS.gene066713.t1	MTR_3g102600	35.616	219	101	4	4	221	4	183	4.48e-37	131
MS.gene066713.t1	MTR_0450s0040	29.719	249	154	4	12	248	6	245	3.63e-32	122
MS.gene066713.t1	MTR_3g102600	36.416	173	73	2	54	226	4	139	5.85e-32	117
MS.gene066713.t1	MTR_7g026400	33.175	211	120	4	52	248	30	233	1.17e-31	124
MS.gene066713.t1	MTR_3g102600	34.524	168	73	2	54	221	4	134	2.39e-29	109
MS.gene066713.t1	MTR_4g121020	36.559	186	90	3	88	248	6	188	1.55e-28	115
MS.gene066713.t1	MTR_8g032710	24.090	357	211	10	12	309	19	374	4.17e-22	96.7
MS.gene066713.t1	MTR_1g013160	34.211	152	67	3	71	193	1	148	5.85e-19	82.4
MS.gene066713.t1	MTR_2g090675	38.298	94	55	2	135	226	125	217	2.69e-14	73.2
MS.gene066713.t1	MTR_5g041350	55.556	54	23	1	170	222	15	68	1.37e-13	70.9
MS.gene066713.t1	MTR_6g032990	44.872	78	42	1	170	246	42	119	4.13e-13	69.7
MS.gene066713.t1	MTR_7g098250	40.594	101	55	3	161	256	253	353	4.67e-13	69.7
MS.gene066713.t1	MTR_4g078810	48.276	58	30	0	169	226	157	214	6.58e-13	69.3
MS.gene066713.t1	MTR_7g088070	40.659	91	51	2	168	257	48	136	8.49e-13	67.8
MS.gene066713.t1	MTR_4g081710	51.852	54	25	1	170	222	17	70	1.85e-12	67.4
MS.gene066713.t1	MTR_2g086450	53.704	54	24	1	170	222	45	98	2.75e-12	67.0
MS.gene066713.t1	MTR_7g088070	51.786	56	26	1	168	222	48	103	3.10e-12	66.2
MS.gene066713.t1	MTR_5g014040	36.250	80	51	0	169	248	310	389	4.29e-12	67.0
MS.gene066713.t1	MTR_7g115530	47.222	72	36	2	170	239	218	289	5.68e-12	65.9
MS.gene066713.t1	MTR_7g115530	40.659	91	51	3	170	258	218	307	7.94e-12	65.5
MS.gene066713.t1	MTR_7g115530	50.000	64	30	2	170	231	218	281	1.21e-11	65.1
MS.gene066713.t1	MTR_2g027860	55.556	54	23	1	170	222	49	102	1.38e-11	64.7
MS.gene066713.t1	MTR_7g115530	40.659	91	51	3	170	258	218	307	1.69e-11	65.1
MS.gene066713.t1	MTR_7g089010	48.276	58	30	0	169	226	90	147	1.84e-11	64.3
MS.gene066713.t1	MTR_4g098870	48.148	54	28	0	169	222	309	362	2.02e-11	65.1
MS.gene066713.t1	MTR_4g098870	48.148	54	28	0	169	222	309	362	2.14e-11	64.7
MS.gene066713.t1	MTR_4g098870	48.148	54	28	0	169	222	329	382	2.21e-11	64.7
MS.gene066713.t1	MTR_4g098870	48.148	54	28	0	169	222	348	401	2.32e-11	64.7
MS.gene066713.t1	MTR_4g098870	48.148	54	28	0	169	222	329	382	2.35e-11	64.7
MS.gene066713.t1	MTR_1g080330	42.857	84	45	3	161	242	165	247	2.91e-11	63.5
MS.gene066713.t1	MTR_1g093080	45.122	82	35	3	151	229	199	273	3.24e-11	63.9
MS.gene066713.t1	MTR_7g093030	42.466	73	40	2	167	238	209	280	3.59e-11	63.2
MS.gene066713.t1	MTR_4g064730	46.552	58	31	0	169	226	130	187	3.83e-11	63.2
MS.gene066713.t1	MTR_1g080330	47.059	68	34	2	166	231	171	238	6.70e-11	63.2
MS.gene066713.t1	MTR_7g093030	47.368	57	29	1	167	222	209	265	8.96e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene066713.t1	AT2G01760	38.403	263	121	5	7	232	4	262	1.92e-55	184
MS.gene066713.t1	AT1G67710	40.075	267	124	8	11	243	8	272	2.69e-53	182
MS.gene066713.t1	AT3G16857	36.242	298	135	8	10	252	33	330	2.33e-50	177
MS.gene066713.t1	AT3G16857	36.242	298	135	8	10	252	33	330	2.63e-50	177
MS.gene066713.t1	AT2G01760	35.052	291	120	7	7	232	4	290	1.46e-49	170
MS.gene066713.t1	AT4G31920	36.481	233	138	2	10	232	13	245	5.04e-46	164
MS.gene066713.t1	AT2G25180	38.075	239	126	5	10	226	13	251	7.39e-44	158
MS.gene066713.t1	AT3G16857	35.135	259	113	8	49	252	2	260	3.33e-39	145
MS.gene066713.t1	AT5G58080	37.008	254	126	7	10	236	14	260	4.97e-39	145
MS.gene066713.t1	AT1G67710	40.191	209	90	7	68	243	1	207	8.50e-36	134
MS.gene066713.t1	AT2G01760	35.821	201	89	4	68	232	1	197	5.63e-35	129
MS.gene066713.t1	AT5G49240	31.356	236	137	5	9	219	37	272	3.34e-33	124
MS.gene066713.t1	AT3G62670	30.258	271	159	9	28	272	53	319	9.54e-32	123
MS.gene066713.t1	AT1G49190	27.734	256	154	6	10	234	30	285	1.06e-28	114
MS.gene066713.t1	AT1G67710	38.624	189	81	7	88	243	12	198	7.49e-27	109
MS.gene066713.t1	AT5G07210	26.667	270	144	6	14	231	16	283	4.75e-25	105
MS.gene066713.t1	AT5G07210	25.899	278	144	7	14	231	16	291	1.56e-22	98.2
MS.gene066713.t1	AT2G27070	25.379	264	140	8	14	222	16	277	1.69e-19	89.4
MS.gene066713.t1	AT1G49190	32.258	124	83	1	10	132	30	153	1.34e-17	83.6
MS.gene066713.t1	AT5G29000	40.777	103	52	4	135	235	203	298	1.20e-15	76.6
MS.gene066713.t1	AT5G29000	38.938	113	60	4	135	245	203	308	1.38e-15	77.0
MS.gene066713.t1	AT5G29000	38.938	113	60	4	135	245	160	265	1.54e-15	76.6
MS.gene066713.t1	AT5G29000	38.938	113	60	4	135	245	160	265	1.54e-15	76.6
MS.gene066713.t1	AT5G44190	48.333	60	31	0	167	226	144	203	1.35e-13	71.2
MS.gene066713.t1	AT5G44190	48.333	60	31	0	167	226	144	203	1.49e-13	70.9
MS.gene066713.t1	AT3G04030	55.556	54	23	1	170	222	45	98	4.15e-13	69.7
MS.gene066713.t1	AT3G04030	55.556	54	23	1	170	222	45	98	4.79e-13	69.7
MS.gene066713.t1	AT4G28610	47.126	87	40	4	170	252	225	309	7.26e-13	68.9
MS.gene066713.t1	AT3G46640	44.444	81	42	2	146	226	123	200	8.51e-13	68.6
MS.gene066713.t1	AT5G18240	55.556	54	23	1	170	222	45	98	8.63e-13	68.9
MS.gene066713.t1	AT5G18240	55.556	54	23	1	170	222	45	98	8.63e-13	68.9
MS.gene066713.t1	AT3G46640	44.444	81	42	2	146	226	123	200	8.78e-13	68.2
MS.gene066713.t1	AT3G46640	44.444	81	42	2	146	226	123	200	8.78e-13	68.2
MS.gene066713.t1	AT5G18240	55.556	54	23	1	170	222	45	98	9.41e-13	68.6
MS.gene066713.t1	AT5G18240	55.556	54	23	1	170	222	45	98	9.64e-13	68.6
MS.gene066713.t1	AT5G18240	55.556	54	23	1	170	222	45	98	9.64e-13	68.6
MS.gene066713.t1	AT2G01060	45.783	83	42	2	159	238	4	86	1.22e-12	67.4
MS.gene066713.t1	AT5G59570	42.105	76	41	1	151	226	125	197	1.71e-12	67.4
MS.gene066713.t1	AT5G59570	42.105	76	41	1	151	226	125	197	1.71e-12	67.4
MS.gene066713.t1	AT3G04450	48.276	58	29	1	166	222	234	291	1.81e-12	67.4
MS.gene066713.t1	AT3G04030	52.830	53	25	0	170	222	45	97	2.76e-12	67.4
MS.gene066713.t1	AT3G04450	48.276	58	29	1	166	222	234	291	3.89e-12	67.0
MS.gene066713.t1	AT3G04450	48.276	58	29	1	166	222	194	251	4.53e-12	66.6
MS.gene066713.t1	AT3G04450	48.276	58	29	1	166	222	194	251	4.53e-12	66.6
MS.gene066713.t1	AT1G69580	51.852	54	25	1	170	222	34	87	7.27e-12	65.9
MS.gene066713.t1	AT2G20570	46.552	58	31	0	169	226	152	209	7.44e-12	66.2
MS.gene066713.t1	AT1G69580	51.852	54	25	1	170	222	34	87	7.88e-12	65.5
MS.gene066713.t1	AT5G05090	42.697	89	39	3	138	226	61	137	9.03e-12	64.7
MS.gene066713.t1	AT2G40970	46.552	58	31	0	169	226	104	161	1.14e-11	64.3
MS.gene066713.t1	AT3G10760	48.276	58	30	0	169	226	104	161	1.45e-11	64.7
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	1.71e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	2.16e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	2.16e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	2.16e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	2.16e-11	65.1
MS.gene066713.t1	AT4G18020	36.842	76	45	1	152	227	281	353	2.16e-11	65.1
MS.gene066713.t1	AT2G20570	47.273	55	29	0	172	226	171	225	4.92e-11	63.5
MS.gene066713.t1	AT3G24120	48.529	68	31	2	170	233	41	108	6.35e-11	62.8
MS.gene066713.t1	AT3G24120	48.529	68	31	2	170	233	41	108	6.58e-11	62.4

Find 56 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACATTGTGTCGCAGAATTC+AGG	0.268438	4.3:-76419809	None:intergenic
ACATATTGCCAGCCATTTAC+AGG	0.282271	4.3:+76419303	MS.gene066713:CDS
TTCAGTTACCAAATGTAGTA+TGG	0.293347	4.3:+76418578	MS.gene066713:intron
CAACGACATTGGGTGGAAAT+TGG	0.345706	4.3:+76419849	MS.gene066713:CDS
TGAGTTGTAGGGTAACATTT+TGG	0.376494	4.3:-76418695	None:intergenic
GATAAATCATCATCAACATA+TGG	0.380393	4.3:-76419921	None:intergenic
AATGTGGGGCTTGCGAATAT+TGG	0.385194	4.3:+76418891	MS.gene066713:CDS
CGAATATTGGACTAAGCCTT+TGG	0.392176	4.3:+76418904	MS.gene066713:CDS
TGACAGGAATGTTGAGTTGT+AGG	0.408636	4.3:-76418707	None:intergenic
ATCAGAAGCCATACTACATT+TGG	0.409595	4.3:-76418586	None:intergenic
AATAAAGAATATGAAATTGT+TGG	0.416766	4.3:+76418989	MS.gene066713:CDS
GGTTCAAGAAAATAGAAAAC+GGG	0.418887	4.3:+76419021	MS.gene066713:CDS
CTTTCTTTCCAACATGTTGA+AGG	0.419409	4.3:-76418610	None:intergenic
CAAAGAAGGCCCGTTTGTCT+TGG	0.435563	4.3:+76419080	MS.gene066713:CDS
AAAAGAAACACTTGCAAAGA+AGG	0.435703	4.3:+76419066	MS.gene066713:CDS
TTGCGATGCACAACGACATT+GGG	0.452490	4.3:+76419839	MS.gene066713:CDS
TTGAGACCGGCTGGGAATGA+TGG	0.453544	4.3:-76418382	None:intergenic
CTTCAACATGTTGGAAAGAA+AGG	0.459586	4.3:+76418611	MS.gene066713:CDS
AATAAATTCTTACTAATGAC+AGG	0.461511	4.3:-76418723	None:intergenic
ACATCTCCTCAATAGAGTTA+AGG	0.467190	4.3:-76418435	None:intergenic
TTCTCGTGACCAAGACAAAC+GGG	0.467708	4.3:-76419089	None:intergenic
TCAACATATGGGAACAAGTT+GGG	0.468173	4.3:-76419909	None:intergenic
GCAATAACCTTGAGACCGGC+TGG	0.475576	4.3:-76418391	None:intergenic
AAAAGTGTTGCTCATAATGT+TGG	0.490442	4.3:-76419877	None:intergenic
AAGTCATAAACATCCATGTC+TGG	0.491105	4.3:-76418669	None:intergenic
TGGTTCAAGAAAATAGAAAA+CGG	0.501089	4.3:+76419020	MS.gene066713:CDS
AGGAAAGAATCATACTATCA+AGG	0.510494	4.3:-76419150	None:intergenic
ATTGCGATGCACAACGACAT+TGG	0.516098	4.3:+76419838	MS.gene066713:CDS
TGTAATCGATATCATTATCA+AGG	0.517908	4.3:+76418457	MS.gene066713:CDS
GACAGGAATGTTGAGTTGTA+GGG	0.519779	4.3:-76418706	None:intergenic
ATCATGAAGTCTATTGAATG+TGG	0.526495	4.3:+76418875	MS.gene066713:CDS
ATTCTCGTGACCAAGACAAA+CGG	0.526657	4.3:-76419090	None:intergenic
AAAATGAACCTGTAAATGGC+TGG	0.527802	4.3:-76419311	None:intergenic
TTCTGATGCCTTCAACATGT+TGG	0.527887	4.3:+76418602	MS.gene066713:CDS
CATGTTGCAAGAATTAGAAA+CGG	0.528421	4.3:+76418956	MS.gene066713:CDS
AGAAAACTCTGGTCATGCTC+CGG	0.537353	4.3:-76419786	None:intergenic
CACTCTCCTTAACTCTATTG+AGG	0.546467	4.3:+76418429	MS.gene066713:CDS
CTACGAGCAGTCAATCAACT+AGG	0.547867	4.3:+76419127	MS.gene066713:CDS
ATAAATCATCATCAACATAT+GGG	0.548211	4.3:-76419920	None:intergenic
AGCTCAACAGAAGAGACAAA+AGG	0.548661	4.3:+76419696	MS.gene066713:CDS
TCATGAAGTCTATTGAATGT+GGG	0.549366	4.3:+76418876	MS.gene066713:CDS
ATCATTCCCAGCCGGTCTCA+AGG	0.552068	4.3:+76418384	MS.gene066713:CDS
ATCAACATATGGGAACAAGT+TGG	0.563419	4.3:-76419910	None:intergenic
TGAGACCGGCTGGGAATGAT+GGG	0.577892	4.3:-76418381	None:intergenic
CGATGCACAACGACATTGGG+TGG	0.580466	4.3:+76419842	MS.gene066713:CDS
AATTGCAATAACCTTGAGAC+CGG	0.581075	4.3:-76418395	None:intergenic
TGAAATTGTTGGAAGCTCGA+TGG	0.585502	4.3:+76419000	MS.gene066713:CDS
AGAAGCTACTCACTCAATGC+CGG	0.591913	4.3:+76419767	MS.gene066713:CDS
CAGAATTCAGGAGAAAACTC+TGG	0.602905	4.3:-76419797	None:intergenic
CATGAAGTCTATTGAATGTG+GGG	0.606058	4.3:+76418877	MS.gene066713:CDS
CAATAACCTTGAGACCGGCT+GGG	0.613963	4.3:-76418390	None:intergenic
CAACAGAAGAGACAAAAGGT+AGG	0.617016	4.3:+76419700	MS.gene066713:CDS
GACAACCCATCATTCCCAGC+CGG	0.620153	4.3:+76418376	MS.gene066713:CDS
TGATGCTCATATGCCAGACA+TGG	0.629107	4.3:+76418656	MS.gene066713:CDS
ATGATTTATCATCACTTGTG+TGG	0.696325	4.3:+76419934	MS.gene066713:CDS
GTTCAAGAAAATAGAAAACG+GGG	0.722642	4.3:+76419022	MS.gene066713:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAAGAATATGAAATTGT+TGG	+	chr4.3:76418989-76419008	MS.gene066713:CDS	15.0%
!!!	AATATGTTCTTTTTTCATAT+CGG	-	chr4.3:76419290-76419309	None:intergenic	15.0%
!!!	TGATTTTAAACTGAAATTTA+TGG	+	chr4.3:76419611-76419630	MS.gene066713:intron	15.0%
!!	AAAAGATGAAAACTTGAATA+AGG	-	chr4.3:76418500-76418519	None:intergenic	20.0%
!!	AATAAATTCTTACTAATGAC+AGG	-	chr4.3:76418726-76418745	None:intergenic	20.0%
!!	AGCATAGTAAAAAAGTAATT+AGG	-	chr4.3:76419173-76419192	None:intergenic	20.0%
!!	ATAAATCATCATCAACATAT+GGG	-	chr4.3:76419923-76419942	None:intergenic	20.0%
!!	CAATATAAGAATAAACAAAC+AGG	-	chr4.3:76418553-76418572	None:intergenic	20.0%
!!!	AAAAAAGATTCTGAAAATCA+TGG	+	chr4.3:76419258-76419277	MS.gene066713:CDS	20.0%
!!!	ATATGTTCTTTTTTCATATC+GGG	-	chr4.3:76419289-76419308	None:intergenic	20.0%
!!!	ATATTTCTTTTTTGTAGTGA+TGG	+	chr4.3:76418829-76418848	MS.gene066713:intron	20.0%
!!!	ATGATTTTCAGAATCTTTTT+TGG	-	chr4.3:76419259-76419278	None:intergenic	20.0%
!!!	ATGTTTTTCTCTTAATTTTC+AGG	+	chr4.3:76419226-76419245	MS.gene066713:intron	20.0%
!!!	ATTCAAGTTTTCATCTTTTT+TGG	+	chr4.3:76418501-76418520	MS.gene066713:intron	20.0%
!!!	TGTTTTTCTCTTAATTTTCA+GGG	+	chr4.3:76419227-76419246	MS.gene066713:intron	20.0%
!!!	TTTTGCAGAAATATAGAAAT+CGG	+	chr4.3:76419667-76419686	MS.gene066713:intron	20.0%
!	AGTAGTATATTATCAACAAG+AGG	-	chr4.3:76419580-76419599	None:intergenic	25.0%
!	GATAAATCATCATCAACATA+TGG	-	chr4.3:76419924-76419943	None:intergenic	25.0%
!	TACAAAAATGAACCTGTAAA+TGG	-	chr4.3:76419318-76419337	None:intergenic	25.0%
!	TGGTTCAAGAAAATAGAAAA+CGG	+	chr4.3:76419020-76419039	MS.gene066713:CDS	25.0%
!	TGTAATCGATATCATTATCA+AGG	+	chr4.3:76418457-76418476	MS.gene066713:CDS	25.0%
!!	GTTTTTCTCTTAATTTTCAG+GGG	+	chr4.3:76419228-76419247	MS.gene066713:intron	25.0%
!!!	AAGTCAAATTTTGTTTCAAG+AGG	-	chr4.3:76419747-76419766	None:intergenic	25.0%
	AAAAGAAACACTTGCAAAGA+AGG	+	chr4.3:76419066-76419085	MS.gene066713:CDS	30.0%
	AAAAGATAACTGACAAACCT+AGG	-	chr4.3:76419394-76419413	None:intergenic	30.0%
	AGGAAAGAATCATACTATCA+AGG	-	chr4.3:76419153-76419172	None:intergenic	30.0%
	ATCATGAAGTCTATTGAATG+TGG	+	chr4.3:76418875-76418894	MS.gene066713:CDS	30.0%
	ATGATTTATCATCACTTGTG+TGG	+	chr4.3:76419934-76419953	MS.gene066713:CDS	30.0%
	CATGTTGCAAGAATTAGAAA+CGG	+	chr4.3:76418956-76418975	MS.gene066713:CDS	30.0%
	GGTTCAAGAAAATAGAAAAC+GGG	+	chr4.3:76419021-76419040	MS.gene066713:CDS	30.0%
	GTTCAAGAAAATAGAAAACG+GGG	+	chr4.3:76419022-76419041	MS.gene066713:CDS	30.0%
	TCATGAAGTCTATTGAATGT+GGG	+	chr4.3:76418876-76418895	MS.gene066713:CDS	30.0%
	TGATTTACAACAACAGACTT+AGG	-	chr4.3:76419418-76419437	None:intergenic	30.0%
	TTCAGTTACCAAATGTAGTA+TGG	+	chr4.3:76418578-76418597	MS.gene066713:intron	30.0%
	TTGAATAACATGCAAGACTA+AGG	-	chr4.3:76419456-76419475	None:intergenic	30.0%
!	CTTCATGATAGAACTTTTTG+TGG	-	chr4.3:76418864-76418883	None:intergenic	30.0%
!!	AAAAGTGTTGCTCATAATGT+TGG	-	chr4.3:76419880-76419899	None:intergenic	30.0%
	AAAAAGAGGTCAAGATCATG+TGG	+	chr4.3:76418930-76418949	MS.gene066713:CDS	35.0%
	AAAATGAACCTGTAAATGGC+TGG	-	chr4.3:76419314-76419333	None:intergenic	35.0%
	AAGTCATAAACATCCATGTC+TGG	-	chr4.3:76418672-76418691	None:intergenic	35.0%
	AATTGCAATAACCTTGAGAC+CGG	-	chr4.3:76418398-76418417	None:intergenic	35.0%
	ACATCTCCTCAATAGAGTTA+AGG	-	chr4.3:76418438-76418457	None:intergenic	35.0%
	AGAGGATGTATAGAAGCTAA+TGG	-	chr4.3:76419562-76419581	None:intergenic	35.0%
	AGTAGTGAATTATGCAGTCA+TGG	+	chr4.3:76419492-76419511	MS.gene066713:intron	35.0%
	ATCAACATATGGGAACAAGT+TGG	-	chr4.3:76419913-76419932	None:intergenic	35.0%
	ATCAGAAGCCATACTACATT+TGG	-	chr4.3:76418589-76418608	None:intergenic	35.0%
	CATGAAGTCTATTGAATGTG+GGG	+	chr4.3:76418877-76418896	MS.gene066713:CDS	35.0%
	CTTCAACATGTTGGAAAGAA+AGG	+	chr4.3:76418611-76418630	MS.gene066713:CDS	35.0%
	CTTTCTTTCCAACATGTTGA+AGG	-	chr4.3:76418613-76418632	None:intergenic	35.0%
	TAAGCCTTTGGTTGAAAAAG+AGG	+	chr4.3:76418916-76418935	MS.gene066713:CDS	35.0%
	TCAACATATGGGAACAAGTT+GGG	-	chr4.3:76419912-76419931	None:intergenic	35.0%
!	CTTTGCAAGTGTTTCTTTTG+AGG	-	chr4.3:76419065-76419084	None:intergenic	35.0%
!	TGAGTTGTAGGGTAACATTT+TGG	-	chr4.3:76418698-76418717	None:intergenic	35.0%
!!!	TTGACCTCTTTTTCAACCAA+AGG	-	chr4.3:76418923-76418942	None:intergenic	35.0%
	ACATATTGCCAGCCATTTAC+AGG	+	chr4.3:76419303-76419322	MS.gene066713:CDS	40.0%
	ACCTAAGTCTATAGTTGCCT+AGG	+	chr4.3:76419374-76419393	MS.gene066713:intron	40.0%
	ACCTAGGCAACTATAGACTT+AGG	-	chr4.3:76419378-76419397	None:intergenic	40.0%
	AGCTCAACAGAAGAGACAAA+AGG	+	chr4.3:76419696-76419715	MS.gene066713:CDS	40.0%
	ATTCTCGTGACCAAGACAAA+CGG	-	chr4.3:76419093-76419112	None:intergenic	40.0%
	CAACAGAAGAGACAAAAGGT+AGG	+	chr4.3:76419700-76419719	MS.gene066713:CDS	40.0%
	CACTCTCCTTAACTCTATTG+AGG	+	chr4.3:76418429-76418448	MS.gene066713:CDS	40.0%
	CAGAATTCAGGAGAAAACTC+TGG	-	chr4.3:76419800-76419819	None:intergenic	40.0%
	CGAATATTGGACTAAGCCTT+TGG	+	chr4.3:76418904-76418923	MS.gene066713:CDS	40.0%
	TGAAATTGTTGGAAGCTCGA+TGG	+	chr4.3:76419000-76419019	MS.gene066713:CDS	40.0%
	TTCTGATGCCTTCAACATGT+TGG	+	chr4.3:76418602-76418621	MS.gene066713:CDS	40.0%
!	GACAGGAATGTTGAGTTGTA+GGG	-	chr4.3:76418709-76418728	None:intergenic	40.0%
!	TGACAGGAATGTTGAGTTGT+AGG	-	chr4.3:76418710-76418729	None:intergenic	40.0%
	AATGTGGGGCTTGCGAATAT+TGG	+	chr4.3:76418891-76418910	MS.gene066713:CDS	45.0%
	AGAAAACTCTGGTCATGCTC+CGG	-	chr4.3:76419789-76419808	None:intergenic	45.0%
	AGAAGCTACTCACTCAATGC+CGG	+	chr4.3:76419767-76419786	MS.gene066713:CDS	45.0%
	ATTGCGATGCACAACGACAT+TGG	+	chr4.3:76419838-76419857	MS.gene066713:CDS	45.0%
	CAACGACATTGGGTGGAAAT+TGG	+	chr4.3:76419849-76419868	MS.gene066713:CDS	45.0%
	CTACGAGCAGTCAATCAACT+AGG	+	chr4.3:76419127-76419146	MS.gene066713:CDS	45.0%
	GACATTGTGTCGCAGAATTC+AGG	-	chr4.3:76419812-76419831	None:intergenic	45.0%
	TGATGCTCATATGCCAGACA+TGG	+	chr4.3:76418656-76418675	MS.gene066713:CDS	45.0%
	TTCTCGTGACCAAGACAAAC+GGG	-	chr4.3:76419092-76419111	None:intergenic	45.0%
	TTGCGATGCACAACGACATT+GGG	+	chr4.3:76419839-76419858	MS.gene066713:CDS	45.0%
	CAAAGAAGGCCCGTTTGTCT+TGG	+	chr4.3:76419080-76419099	MS.gene066713:CDS	50.0%
	CAATAACCTTGAGACCGGCT+GGG	-	chr4.3:76418393-76418412	None:intergenic	50.0%
	ATCATTCCCAGCCGGTCTCA+AGG	+	chr4.3:76418384-76418403	MS.gene066713:CDS	55.0%
	CGATGCACAACGACATTGGG+TGG	+	chr4.3:76419842-76419861	MS.gene066713:CDS	55.0%
	GACAACCCATCATTCCCAGC+CGG	+	chr4.3:76418376-76418395	MS.gene066713:CDS	55.0%
	GCAATAACCTTGAGACCGGC+TGG	-	chr4.3:76418394-76418413	None:intergenic	55.0%
	TGAGACCGGCTGGGAATGAT+GGG	-	chr4.3:76418384-76418403	None:intergenic	55.0%
	TTGAGACCGGCTGGGAATGA+TGG	-	chr4.3:76418385-76418404	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	76418361	76419959	76418361	ID=MS.gene066713
chr4.3	mRNA	76418361	76419959	76418361	ID=MS.gene066713.t1;Parent=MS.gene066713
chr4.3	exon	76418361	76418478	76418361	ID=MS.gene066713.t1.exon1;Parent=MS.gene066713.t1
chr4.3	CDS	76418361	76418478	76418361	ID=cds.MS.gene066713.t1;Parent=MS.gene066713.t1
chr4.3	exon	76418583	76418732	76418583	ID=MS.gene066713.t1.exon2;Parent=MS.gene066713.t1
chr4.3	CDS	76418583	76418732	76418583	ID=cds.MS.gene066713.t1;Parent=MS.gene066713.t1
chr4.3	exon	76418846	76419157	76418846	ID=MS.gene066713.t1.exon3;Parent=MS.gene066713.t1
chr4.3	CDS	76418846	76419157	76418846	ID=cds.MS.gene066713.t1;Parent=MS.gene066713.t1
chr4.3	exon	76419248	76419324	76419248	ID=MS.gene066713.t1.exon4;Parent=MS.gene066713.t1
chr4.3	CDS	76419248	76419324	76419248	ID=cds.MS.gene066713.t1;Parent=MS.gene066713.t1
chr4.3	exon	76419675	76419959	76419675	ID=MS.gene066713.t1.exon5;Parent=MS.gene066713.t1
chr4.3	CDS	76419675	76419959	76419675	ID=cds.MS.gene066713.t1;Parent=MS.gene066713.t1

Gene Sequence

>MS.gene066713

ATGGCAGTTTTCACTGACAACCCATCATTCCCAGCCGGTCTCAAGGTTATTGCAATTGATCATGACATCACTCTCCTTAACTCTATTGAGGAGATGTGTAATCGATATCATTATCAAGGTTAGTTACTGAATCATACCTTATTCAAGTTTTCATCTTTTTTGGTAAAAATTCTTACTTTTATATGTATTCCTGTTTGTTTATTCTTATATTGTTTATTTCAGTTACCAAATGTAGTATGGCTTCTGATGCCTTCAACATGTTGGAAAGAAAGGACTGTTTCGATGTAATGTTGATTGATGCTCATATGCCAGACATGGATGTTTATGACTTTGTCCAAAATGTTACCCTACAACTCAACATTCCTGTCATTAGTAAGAATTTATTCAACTTTTTCATTAAAATTCATTAGTTACACATTTCACATAATTTATTCATATATATGTACTTAAGAAGTGTGAATTGACATTATATTTCTTTTTTGTAGTGATGGCTGTTGATTCCACAAAAAGTTCTATCATGAAGTCTATTGAATGTGGGGCTTGCGAATATTGGACTAAGCCTTTGGTTGAAAAAGAGGTCAAGATCATGTGGCAACATGTTGCAAGAATTAGAAACGGTTTGATTGAAAATAAAGAATATGAAATTGTTGGAAGCTCGATGGTTCAAGAAAATAGAAAACGGGGTAGAGAAGATGCTAATGCCTCAAAAGAAACACTTGCAAAGAAGGCCCGTTTGTCTTGGTCACGAGAATTGCATCAGCAGTTTCTACGAGCAGTCAATCAACTAGGCCTTGATAGTATGATTCTTTCCTAATTACTTTTTTACTATGCTTTGTTGCATTCTTCAACAGTTGAACTTATGTGCATGTTTTTCTCTTAATTTTCAGGGGCAACGCCAAAAAAGATTCTGAAAATCATGGATGTTCCCGATATGAAAAAAGAACATATTGCCAGCCATTTACAGGTTCATTTTTGTATTAATTTTTGTTGATTCTGTAAATTTGATATATTTTACCTAAGTCTATAGTTGCCTAGGTTTGTCAGTTATCTTTTGCCTAAGTCTGTTGTTGTAAATCATTTATGTTGTTTATACCTTAGTCTTGCATGTTATTCAAACTATTGAAGTTGTAAAGTAGTGAATTATGCAGTCATGGCAGATCTTGAAGTCTGAGTTTTAGAATAGAATATAAGTATTTCACCATTAGCTTCTATACATCCTCTTGTTGATAATATACTACTTGTCTTTTGTGTGATTTTAAACTGAAATTTATGGAGTATTATTATTAACATTGTAACTGCAATGTTGTTTTGCAGAAATATAGAAATCGGTTAAAGAGCTCAACAGAAGAGACAAAAGGTAGGATGAAAAAATCAAAGACGAGTCCTCTTGAAACAAAATTTGACTTAGAAGCTACTCACTCAATGCCGGAGCATGACCAGAGTTTTCTCCTGAATTCTGCGACACAATGTCGCGACAATTGCGATGCACAACGACATTGGGTGGAAATTGGTGAATCCAACATTATGAGCAACACTTTTTCAGACTTGCCCAACTTGTTCCCATATGTTGATGATGATTTATCATCACTTGTGTGGTGA

Protein sequence

>MS.gene066713.t1

MAVFTDNPSFPAGLKVIAIDHDITLLNSIEEMCNRYHYQVTKCSMASDAFNMLERKDCFDVMLIDAHMPDMDVYDFVQNVTLQLNIPVIMMAVDSTKSSIMKSIECGACEYWTKPLVEKEVKIMWQHVARIRNGLIENKEYEIVGSSMVQENRKRGREDANASKETLAKKARLSWSRELHQQFLRAVNQLGLDRATPKKILKIMDVPDMKKEHIASHLQKYRNRLKSSTEETKGRMKKSKTSPLETKFDLEATHSMPEHDQSFLLNSATQCRDNCDAQRHWVEIGESNIMSNTFSDLPNLFPYVDDDLSSLVW