Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066732.t1 | XP_027191736.1 | 76.6 | 725 | 167 | 2 | 25 | 748 | 1 | 723 | 0.00E+00 | 1130.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066732.t1 | Q9SZL8 | 34.4 | 631 | 402 | 7 | 56 | 677 | 73 | 700 | 4.2e-104 | 380.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066732.t1 | A0A3Q7Y261 | 76.6 | 725 | 167 | 2 | 25 | 748 | 1 | 723 | 0.0e+00 | 1130.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene066732.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066732.t1 | MTR_5g015480 | 88.649 | 185 | 21 | 0 | 1 | 185 | 1 | 185 | 1.31e-110 | 337 |
MS.gene066732.t1 | MTR_0402s0040 | 51.964 | 331 | 85 | 6 | 416 | 746 | 200 | 456 | 5.18e-89 | 288 |
MS.gene066732.t1 | MTR_0402s0040 | 69.500 | 200 | 56 | 2 | 36 | 231 | 2 | 200 | 5.67e-86 | 280 |
MS.gene066732.t1 | MTR_6g017200 | 71.074 | 121 | 31 | 1 | 36 | 152 | 34 | 154 | 2.56e-50 | 173 |
MS.gene066732.t1 | MTR_2g070590 | 69.748 | 119 | 36 | 0 | 40 | 158 | 1 | 119 | 3.67e-50 | 171 |
MS.gene066732.t1 | MTR_7g113010 | 56.875 | 160 | 51 | 2 | 26 | 181 | 423 | 568 | 1.18e-45 | 172 |
MS.gene066732.t1 | MTR_1g057920 | 64.228 | 123 | 40 | 1 | 27 | 145 | 1 | 123 | 4.95e-44 | 154 |
MS.gene066732.t1 | MTR_1g086270 | 81.250 | 80 | 15 | 0 | 351 | 430 | 1 | 80 | 3.07e-42 | 149 |
MS.gene066732.t1 | MTR_6g051425 | 30.952 | 294 | 181 | 6 | 63 | 337 | 24 | 314 | 1.20e-40 | 152 |
MS.gene066732.t1 | MTR_0558s0020 | 30.769 | 247 | 152 | 4 | 70 | 297 | 50 | 296 | 2.49e-35 | 136 |
MS.gene066732.t1 | MTR_0137s0040 | 68.182 | 88 | 24 | 1 | 25 | 108 | 1 | 88 | 5.71e-34 | 126 |
MS.gene066732.t1 | MTR_1g070355 | 30.526 | 285 | 178 | 7 | 21 | 293 | 35 | 311 | 2.06e-31 | 130 |
MS.gene066732.t1 | MTR_8g446020 | 31.694 | 183 | 124 | 1 | 116 | 297 | 74 | 256 | 2.61e-30 | 120 |
MS.gene066732.t1 | MTR_6g090505 | 32.967 | 182 | 121 | 1 | 116 | 296 | 49 | 230 | 1.40e-27 | 115 |
MS.gene066732.t1 | MTR_1g050985 | 80.000 | 60 | 12 | 0 | 126 | 185 | 39 | 98 | 6.08e-27 | 105 |
MS.gene066732.t1 | MTR_7g074790 | 43.023 | 172 | 76 | 5 | 56 | 226 | 10 | 160 | 6.64e-27 | 110 |
MS.gene066732.t1 | MTR_4g035820 | 31.939 | 263 | 166 | 8 | 48 | 301 | 66 | 324 | 2.32e-25 | 112 |
MS.gene066732.t1 | MTR_4g102720 | 35.119 | 168 | 73 | 3 | 56 | 223 | 7 | 138 | 2.71e-23 | 99.4 |
MS.gene066732.t1 | MTR_0291s0060 | 63.014 | 73 | 23 | 1 | 38 | 106 | 13 | 85 | 1.45e-22 | 92.8 |
MS.gene066732.t1 | MTR_5g076070 | 27.236 | 246 | 167 | 5 | 46 | 285 | 43 | 282 | 7.81e-22 | 96.7 |
MS.gene066732.t1 | MTR_1g083640 | 26.991 | 226 | 146 | 4 | 62 | 268 | 57 | 282 | 2.06e-21 | 95.5 |
MS.gene066732.t1 | MTR_7g446520 | 29.796 | 245 | 154 | 4 | 59 | 302 | 91 | 318 | 2.17e-21 | 96.7 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 56 | 159 | 6.59e-21 | 92.8 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 56 | 159 | 6.94e-21 | 92.8 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 76 | 179 | 1.00e-20 | 92.8 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 74 | 177 | 1.01e-20 | 92.8 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 76 | 179 | 1.01e-20 | 92.8 |
MS.gene066732.t1 | MTR_4g067290 | 46.296 | 108 | 52 | 3 | 56 | 161 | 116 | 219 | 2.14e-20 | 92.8 |
MS.gene066732.t1 | MTR_5g039760 | 36.224 | 196 | 95 | 7 | 60 | 252 | 14 | 182 | 5.12e-20 | 89.0 |
MS.gene066732.t1 | MTR_2g098920 | 35.294 | 153 | 88 | 5 | 19 | 165 | 44 | 191 | 1.18e-19 | 90.1 |
MS.gene066732.t1 | MTR_1g091013 | 67.857 | 56 | 18 | 0 | 69 | 124 | 14 | 69 | 9.91e-18 | 78.6 |
MS.gene066732.t1 | MTR_6g022080 | 30.519 | 154 | 104 | 2 | 62 | 213 | 91 | 243 | 8.05e-17 | 81.3 |
MS.gene066732.t1 | MTR_7g061980 | 41.176 | 119 | 66 | 3 | 50 | 167 | 4 | 119 | 1.12e-16 | 77.0 |
MS.gene066732.t1 | MTR_0337s0040 | 27.703 | 148 | 106 | 1 | 116 | 262 | 75 | 222 | 1.23e-15 | 77.4 |
MS.gene066732.t1 | MTR_7g446480 | 32.955 | 176 | 115 | 3 | 132 | 305 | 140 | 314 | 1.60e-15 | 79.0 |
MS.gene066732.t1 | MTR_1g008290 | 32.653 | 147 | 93 | 3 | 108 | 253 | 3 | 144 | 2.26e-15 | 74.3 |
MS.gene066732.t1 | MTR_6g022070 | 28.161 | 174 | 120 | 1 | 351 | 524 | 1 | 169 | 3.63e-15 | 77.8 |
MS.gene066732.t1 | MTR_7g446510 | 32.386 | 176 | 116 | 3 | 132 | 305 | 155 | 329 | 4.25e-15 | 77.8 |
MS.gene066732.t1 | MTR_3g450850 | 24.797 | 246 | 173 | 5 | 62 | 296 | 53 | 297 | 3.03e-14 | 75.5 |
MS.gene066732.t1 | MTR_5g045210 | 38.202 | 89 | 55 | 0 | 588 | 676 | 20 | 108 | 6.13e-14 | 71.6 |
MS.gene066732.t1 | MTR_3g006370 | 39.048 | 105 | 62 | 2 | 56 | 159 | 50 | 153 | 7.66e-14 | 72.0 |
MS.gene066732.t1 | MTR_2g099430 | 40.909 | 88 | 50 | 1 | 80 | 167 | 27 | 112 | 1.63e-13 | 68.2 |
MS.gene066732.t1 | MTR_1g019850 | 30.488 | 164 | 104 | 3 | 34 | 194 | 45 | 201 | 8.40e-13 | 69.3 |
MS.gene066732.t1 | MTR_2g014100 | 23.383 | 201 | 132 | 4 | 62 | 240 | 50 | 250 | 1.23e-12 | 68.9 |
MS.gene066732.t1 | MTR_2g098880 | 32.414 | 145 | 92 | 4 | 42 | 182 | 59 | 201 | 1.24e-12 | 69.3 |
MS.gene066732.t1 | MTR_2g098880 | 34.351 | 131 | 80 | 4 | 56 | 182 | 61 | 189 | 1.49e-12 | 68.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066732.t1 | AT4G38180 | 34.390 | 631 | 402 | 7 | 56 | 677 | 73 | 700 | 9.25e-121 | 381 |
MS.gene066732.t1 | AT4G15090 | 31.731 | 624 | 412 | 7 | 56 | 673 | 51 | 666 | 4.47e-102 | 333 |
MS.gene066732.t1 | AT4G15090 | 31.731 | 624 | 412 | 7 | 56 | 673 | 51 | 666 | 4.47e-102 | 333 |
MS.gene066732.t1 | AT4G15090 | 31.731 | 624 | 412 | 7 | 56 | 673 | 51 | 666 | 4.47e-102 | 333 |
MS.gene066732.t1 | AT4G15090 | 31.731 | 624 | 412 | 7 | 56 | 673 | 51 | 666 | 4.47e-102 | 333 |
MS.gene066732.t1 | AT4G15090 | 31.731 | 624 | 412 | 7 | 56 | 673 | 51 | 666 | 4.47e-102 | 333 |
MS.gene066732.t1 | AT3G22170 | 32.472 | 619 | 369 | 11 | 56 | 656 | 70 | 657 | 8.61e-97 | 319 |
MS.gene066732.t1 | AT3G22170 | 32.472 | 619 | 369 | 11 | 56 | 656 | 70 | 657 | 8.61e-97 | 319 |
MS.gene066732.t1 | AT1G76320 | 31.485 | 613 | 399 | 12 | 60 | 668 | 1 | 596 | 2.14e-88 | 292 |
MS.gene066732.t1 | AT1G76320 | 31.485 | 613 | 399 | 12 | 60 | 668 | 1 | 596 | 1.01e-87 | 292 |
MS.gene066732.t1 | AT1G76320 | 31.485 | 613 | 399 | 12 | 60 | 668 | 1 | 596 | 1.01e-87 | 292 |
MS.gene066732.t1 | AT1G76320 | 31.485 | 613 | 399 | 12 | 60 | 668 | 1 | 596 | 1.16e-87 | 292 |
MS.gene066732.t1 | AT2G27110 | 31.250 | 624 | 382 | 14 | 56 | 669 | 49 | 635 | 4.84e-86 | 290 |
MS.gene066732.t1 | AT2G27110 | 31.250 | 624 | 382 | 14 | 56 | 669 | 49 | 635 | 4.84e-86 | 290 |
MS.gene066732.t1 | AT3G06250 | 28.140 | 629 | 394 | 12 | 47 | 668 | 181 | 758 | 4.32e-76 | 261 |
MS.gene066732.t1 | AT3G06250 | 28.140 | 629 | 394 | 12 | 47 | 668 | 181 | 758 | 4.32e-76 | 261 |
MS.gene066732.t1 | AT3G06250 | 28.140 | 629 | 394 | 12 | 47 | 668 | 181 | 758 | 4.32e-76 | 261 |
MS.gene066732.t1 | AT1G10240 | 29.350 | 569 | 388 | 9 | 49 | 608 | 41 | 604 | 1.17e-74 | 256 |
MS.gene066732.t1 | AT1G10240 | 29.350 | 569 | 388 | 9 | 49 | 608 | 41 | 604 | 1.17e-74 | 256 |
MS.gene066732.t1 | AT5G18960 | 29.022 | 634 | 390 | 15 | 44 | 668 | 200 | 782 | 1.27e-74 | 258 |
MS.gene066732.t1 | AT5G18960 | 33.051 | 118 | 65 | 2 | 41 | 158 | 28 | 131 | 2.28e-11 | 67.8 |
MS.gene066732.t1 | AT5G18960 | 29.022 | 634 | 390 | 15 | 44 | 668 | 200 | 782 | 1.27e-74 | 258 |
MS.gene066732.t1 | AT5G18960 | 33.051 | 118 | 65 | 2 | 41 | 158 | 28 | 131 | 2.28e-11 | 67.8 |
MS.gene066732.t1 | AT2G27110 | 33.183 | 443 | 281 | 8 | 235 | 669 | 55 | 490 | 5.56e-74 | 254 |
MS.gene066732.t1 | AT2G32250 | 28.019 | 646 | 400 | 12 | 60 | 691 | 42 | 636 | 6.94e-73 | 253 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 1 | 595 | 7.79e-73 | 252 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 1 | 595 | 9.76e-73 | 252 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 42 | 636 | 1.27e-72 | 253 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 42 | 636 | 1.27e-72 | 253 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 42 | 636 | 1.41e-72 | 253 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 42 | 636 | 1.41e-72 | 253 |
MS.gene066732.t1 | AT2G32250 | 27.752 | 645 | 403 | 11 | 60 | 691 | 42 | 636 | 1.41e-72 | 253 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 26 | 653 | 1.20e-65 | 232 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 26 | 653 | 1.20e-65 | 232 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 26 | 653 | 1.98e-65 | 232 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 26 | 653 | 1.98e-65 | 232 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 26 | 653 | 2.04e-65 | 232 |
MS.gene066732.t1 | AT4G19990 | 27.910 | 670 | 413 | 10 | 61 | 702 | 40 | 667 | 2.32e-65 | 232 |
MS.gene066732.t1 | AT4G38170 | 30.526 | 380 | 251 | 5 | 240 | 612 | 27 | 400 | 1.30e-61 | 217 |
MS.gene066732.t1 | AT1G80010 | 29.372 | 589 | 361 | 15 | 56 | 611 | 95 | 661 | 9.58e-61 | 218 |
MS.gene066732.t1 | AT5G28530 | 26.589 | 598 | 406 | 12 | 56 | 631 | 55 | 641 | 1.14e-60 | 217 |
MS.gene066732.t1 | AT5G28530 | 26.821 | 604 | 393 | 13 | 56 | 631 | 55 | 637 | 1.58e-60 | 217 |
MS.gene066732.t1 | AT5G28530 | 26.821 | 604 | 393 | 13 | 56 | 631 | 55 | 637 | 1.58e-60 | 217 |
MS.gene066732.t1 | AT1G52520 | 27.875 | 574 | 376 | 14 | 54 | 609 | 83 | 636 | 8.91e-59 | 212 |
MS.gene066732.t1 | AT4G19990 | 27.358 | 636 | 392 | 10 | 95 | 702 | 3 | 596 | 1.11e-57 | 209 |
MS.gene066732.t1 | AT5G28530 | 24.074 | 594 | 359 | 13 | 56 | 631 | 55 | 574 | 2.68e-41 | 160 |
MS.gene066732.t1 | AT5G28530 | 23.810 | 588 | 372 | 12 | 56 | 631 | 55 | 578 | 2.88e-41 | 160 |
MS.gene066732.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 70 | 173 | 2.04e-21 | 94.7 |
MS.gene066732.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 70 | 173 | 2.04e-21 | 94.7 |
MS.gene066732.t1 | AT3G59470 | 46.226 | 106 | 55 | 2 | 56 | 161 | 82 | 185 | 2.91e-21 | 94.7 |
MS.gene066732.t1 | AT3G07500 | 38.760 | 129 | 76 | 2 | 34 | 160 | 9 | 136 | 1.75e-15 | 76.6 |
MS.gene066732.t1 | AT2G43280 | 36.220 | 127 | 74 | 3 | 56 | 181 | 22 | 142 | 6.58e-14 | 71.6 |
MS.gene066732.t1 | AT4G12850 | 32.540 | 126 | 78 | 3 | 56 | 181 | 11 | 129 | 2.50e-12 | 65.5 |
MS.gene066732.t1 | AT2G43280 | 40.659 | 91 | 50 | 3 | 71 | 159 | 2 | 90 | 1.25e-11 | 64.3 |
MS.gene066732.t1 | AT4G12850 | 34.951 | 103 | 63 | 2 | 56 | 158 | 11 | 109 | 2.96e-11 | 62.4 |
MS.gene066732.t1 | AT4G12850 | 34.951 | 103 | 63 | 2 | 56 | 158 | 11 | 109 | 8.72e-11 | 62.0 |
Find 114 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAAATAACAAACATATTT+TGG | 0.063618 | 2.3:+34985137 | MS.gene066732:CDS |
TCCAACTTGGCTTGAGAAAT+TGG | 0.175914 | 2.3:+34986542 | MS.gene066732:CDS |
CACAGACAAACAATTGTTTA+TGG | 0.199392 | 2.3:+34985277 | MS.gene066732:CDS |
ATTCATCAGCCAATACAATT+TGG | 0.204201 | 2.3:-34984901 | None:intergenic |
TTGTTTGTCTGTGGCTATTA+AGG | 0.204260 | 2.3:-34985267 | None:intergenic |
GCACAAATGATAAATGATTA+TGG | 0.212778 | 2.3:+34985166 | MS.gene066732:CDS |
CACAATCCATGAAATGTTTC+TGG | 0.237682 | 2.3:-34985442 | None:intergenic |
GAAATTTGCTTCGCACTAAA+AGG | 0.249768 | 2.3:+34985011 | MS.gene066732:CDS |
GGTTAGGATGTAATCAAAAT+TGG | 0.289185 | 2.3:+34986196 | MS.gene066732:CDS |
ACTAATTCATGAAAATCTTT+TGG | 0.310628 | 2.3:-34984935 | None:intergenic |
ATTGTATTGGCTGATGAATC+TGG | 0.322531 | 2.3:+34984905 | MS.gene066732:CDS |
CATTTCATGGATTGTGCACT+TGG | 0.329207 | 2.3:+34985449 | MS.gene066732:CDS |
TCTTGGAGTGTAAACATTAC+CGG | 0.342856 | 2.3:-34985905 | None:intergenic |
TAGTGCGAAGCAAATTTCTA+TGG | 0.349224 | 2.3:-34985006 | None:intergenic |
GACATTCCTCATATTCATCT+TGG | 0.362108 | 2.3:-34985942 | None:intergenic |
CTTCTGTCTTGACTCATATT+CGG | 0.366494 | 2.3:-34985839 | None:intergenic |
ACAGACAAACAATTGTTTAT+GGG | 0.367661 | 2.3:+34985278 | MS.gene066732:CDS |
CAAATAACCATTGAAAAGAA+TGG | 0.368518 | 2.3:-34985327 | None:intergenic |
TATAGTAGGAAATGTGGTTT+TGG | 0.369598 | 2.3:+34984587 | MS.gene066732:CDS |
CGTCCGTTGGGAGTATTTGT+TGG | 0.371935 | 2.3:+34985244 | MS.gene066732:CDS |
TTCATCAGCCAATACAATTT+GGG | 0.375471 | 2.3:-34984900 | None:intergenic |
GAAAGGGGAACATATTGAAT+TGG | 0.379587 | 2.3:+34986218 | MS.gene066732:CDS |
GGTGAATGATATCGTGCAAC+AGG | 0.381657 | 2.3:+34984481 | MS.gene066732:CDS |
AGCAAGGAGCGGATAGTAGT+AGG | 0.390919 | 2.3:+34986024 | MS.gene066732:CDS |
ATGAGACTCTTCATAAACTT+TGG | 0.394637 | 2.3:-34986343 | None:intergenic |
CCCACACATTGCTTTGAGAA+AGG | 0.396961 | 2.3:-34985353 | None:intergenic |
ATTTCACTTGATCGGAAGAT+TGG | 0.399360 | 2.3:+34984770 | MS.gene066732:CDS |
GTCATGCCAGAAACATTTCA+TGG | 0.400517 | 2.3:+34985436 | MS.gene066732:CDS |
CACAAATGATAAATGATTAT+GGG | 0.407470 | 2.3:+34985167 | MS.gene066732:CDS |
AACACCGCGTCTACCCTCTT+TGG | 0.411087 | 2.3:-34984678 | None:intergenic |
ATAGATGATTCACATGCCTT+AGG | 0.411459 | 2.3:-34985489 | None:intergenic |
GATTGTGCACTTGGCACATA+AGG | 0.422392 | 2.3:+34985458 | MS.gene066732:CDS |
TAATGTACCACACTTGGAAA+TGG | 0.430430 | 2.3:+34984523 | MS.gene066732:CDS |
TACACCTTCAACCATTGGAT+TGG | 0.436578 | 2.3:-34984450 | None:intergenic |
ATCATTTATCATTTGTGCAT+CGG | 0.444064 | 2.3:-34985161 | None:intergenic |
ACGTGTGTCGTTTCTACCAT+TGG | 0.448381 | 2.3:-34984225 | None:intergenic |
TGTTTAAGAAATTTGAAAGA+AGG | 0.449252 | 2.3:+34985973 | MS.gene066732:CDS |
TCCAATTTCTCAAGCCAAGT+TGG | 0.453093 | 2.3:-34986543 | None:intergenic |
TAGATGATTCACATGCCTTA+GGG | 0.455627 | 2.3:-34985488 | None:intergenic |
AGAGCCGAGATTGCTTAGAT+AGG | 0.461774 | 2.3:+34986505 | MS.gene066732:CDS |
AACAGGATGTTTAGCACGTA+TGG | 0.468473 | 2.3:+34984745 | MS.gene066732:CDS |
TGCATCTTGATCTGTTAGAA+TGG | 0.469730 | 2.3:-34985389 | None:intergenic |
GTGGACATTGTTGATCTTGG+TGG | 0.470761 | 2.3:+34986468 | MS.gene066732:CDS |
TCACCATTCATCACCACCTA+TGG | 0.473057 | 2.3:+34984266 | MS.gene066732:CDS |
GGAGTTTGAGTCTGAGGCCT+TGG | 0.475074 | 2.3:+34984544 | MS.gene066732:CDS |
GTTTAAGAAATTTGAAAGAA+GGG | 0.482494 | 2.3:+34985974 | MS.gene066732:CDS |
ATAAATGATTATGGGTACTT+TGG | 0.482723 | 2.3:+34985175 | MS.gene066732:CDS |
AATGTGGACATTGTTGATCT+TGG | 0.483171 | 2.3:+34986465 | MS.gene066732:CDS |
GGAATTCCAAGATGAATATG+AGG | 0.483458 | 2.3:+34985936 | MS.gene066732:CDS |
AATAAGAATTATCGTCCGTT+GGG | 0.484650 | 2.3:+34985232 | MS.gene066732:CDS |
GATGTAATCAAAATTGGAAA+GGG | 0.486259 | 2.3:+34986202 | MS.gene066732:CDS |
ACAAGCATCCCAAATTGTAT+TGG | 0.495869 | 2.3:+34984892 | MS.gene066732:CDS |
AACAATATATACTAAAACGT+TGG | 0.503287 | 2.3:+34986160 | MS.gene066732:CDS |
TCACTAAGGTATGGTGAAGT+AGG | 0.507546 | 2.3:+34985040 | MS.gene066732:CDS |
TCTATGGATGGAGAGTCAAT+TGG | 0.511024 | 2.3:+34986396 | MS.gene066732:CDS |
TGGACAAGAGATGCAAGGTT+AGG | 0.511096 | 2.3:+34986180 | MS.gene066732:CDS |
ATCATATAAACATACTCAGC+TGG | 0.522562 | 2.3:-34984842 | None:intergenic |
GATAGTAGTAGGGAATCATA+TGG | 0.523742 | 2.3:+34986035 | MS.gene066732:CDS |
CATACTCAGCTGGCAGAAGA+AGG | 0.525063 | 2.3:-34984832 | None:intergenic |
AAATAAGAATTATCGTCCGT+TGG | 0.526037 | 2.3:+34985231 | MS.gene066732:CDS |
TGGACATTGTTGATCTTGGT+GGG | 0.528035 | 2.3:+34986469 | MS.gene066732:CDS |
TGAAACTCATAAAAGAATGA+AGG | 0.528219 | 2.3:-34985100 | None:intergenic |
TAGTCCTATCTAAGCAATCT+CGG | 0.530700 | 2.3:-34986509 | None:intergenic |
ACATCCAATCCAATGGTTGA+AGG | 0.531051 | 2.3:+34984446 | MS.gene066732:CDS |
GTATGGTTATTTCACTTGAT+CGG | 0.532614 | 2.3:+34984762 | MS.gene066732:CDS |
ATCCCTATGCTTGTACAAGC+CGG | 0.533806 | 2.3:+34985886 | MS.gene066732:CDS |
GCTCGAGCAGAAACTAGAAC+AGG | 0.536024 | 2.3:+34984728 | MS.gene066732:CDS |
GCAAGGAGCGGATAGTAGTA+GGG | 0.537014 | 2.3:+34986025 | MS.gene066732:CDS |
TCAAGATGCAGCAATGGCTA+AGG | 0.541612 | 2.3:+34985402 | MS.gene066732:CDS |
ACGTGATTACTTAACAAAAG+AGG | 0.543276 | 2.3:+34984706 | MS.gene066732:CDS |
CTAAAAGGAACCACTCACTA+AGG | 0.543419 | 2.3:+34985026 | MS.gene066732:CDS |
CAGACAAACAATTGTTTATG+GGG | 0.545894 | 2.3:+34985279 | MS.gene066732:CDS |
TTACCGGCTTGTACAAGCAT+AGG | 0.547981 | 2.3:-34985889 | None:intergenic |
ATAATGTTTCTAAAGACTCA+TGG | 0.548211 | 2.3:+34985614 | MS.gene066732:CDS |
GGAAATGGAGTTTGAGTCTG+AGG | 0.549669 | 2.3:+34984538 | MS.gene066732:CDS |
AATGAGTATAGTAGGAAATG+TGG | 0.549866 | 2.3:+34984581 | MS.gene066732:CDS |
ACCTTTCTCAAAGCAATGTG+TGG | 0.550009 | 2.3:+34985352 | MS.gene066732:CDS |
TCGGAAGATTGGAAAATACA+AGG | 0.556421 | 2.3:+34984781 | MS.gene066732:CDS |
TGTCCATAGGTGGTGATGAA+TGG | 0.557395 | 2.3:-34984269 | None:intergenic |
GGATGTAATCAAAATTGGAA+AGG | 0.558394 | 2.3:+34986201 | MS.gene066732:CDS |
TGTTAGTAATGTACCACACT+TGG | 0.560348 | 2.3:+34984517 | MS.gene066732:CDS |
AAAGTCTTACCGGTGTCCAT+AGG | 0.562691 | 2.3:-34984282 | None:intergenic |
ATTGTGCACTTGGCACATAA+GGG | 0.563830 | 2.3:+34985459 | MS.gene066732:CDS |
TTGCTCAATTTAACTGCTCG+AGG | 0.564353 | 2.3:-34986282 | None:intergenic |
TGTCGAAAATTTGAGACACA+TGG | 0.568497 | 2.3:+34986078 | MS.gene066732:CDS |
ATTATAAAATTCATATGCCA+AGG | 0.568982 | 2.3:-34984561 | None:intergenic |
AACAGATCAAGATGCAGCAA+TGG | 0.573110 | 2.3:+34985396 | MS.gene066732:CDS |
ATTCTTATTTGTCTTGAATG+TGG | 0.574010 | 2.3:-34985218 | None:intergenic |
AGGAACCACTCACTAAGGTA+TGG | 0.576328 | 2.3:+34985031 | MS.gene066732:CDS |
CATAAACAATTGTTTGTCTG+TGG | 0.584673 | 2.3:-34985276 | None:intergenic |
AAAGAGTTGTCAACGGAAAG+CGG | 0.589356 | 2.3:+34985800 | MS.gene066732:CDS |
AAAATTTGTGTGCTCCAAAG+AGG | 0.589431 | 2.3:+34984664 | MS.gene066732:CDS |
TACCGGCTTGTACAAGCATA+GGG | 0.592516 | 2.3:-34985888 | None:intergenic |
GAATTAGTGTCAAAACAAGC+TGG | 0.597771 | 2.3:+34984950 | MS.gene066732:CDS |
GTCTTACCGGTGTCCATAGG+TGG | 0.607232 | 2.3:-34984279 | None:intergenic |
CCTTTCTCAAAGCAATGTGT+GGG | 0.608035 | 2.3:+34985353 | MS.gene066732:CDS |
CACTTTGAAAGAGTTGTCAA+CGG | 0.610932 | 2.3:+34985793 | MS.gene066732:CDS |
AACGTTGGACAAGAGATGCA+AGG | 0.614203 | 2.3:+34986175 | MS.gene066732:CDS |
GAATATTACATCCAATCCAA+TGG | 0.614280 | 2.3:+34984439 | MS.gene066732:CDS |
AAATTTGTGTGCTCCAAAGA+GGG | 0.614397 | 2.3:+34984665 | MS.gene066732:CDS |
CTTCACCATACCTTAGTGAG+TGG | 0.628280 | 2.3:-34985036 | None:intergenic |
TTAGTGTCAAAACAAGCTGG+TGG | 0.629473 | 2.3:+34984953 | MS.gene066732:CDS |
ACATAAGGGAAAATGCCCTA+AGG | 0.636592 | 2.3:+34985473 | MS.gene066732:CDS |
TACAAATTATGATAACAGCA+AGG | 0.637062 | 2.3:+34986008 | MS.gene066732:CDS |
GCTGGTGGAATAAACACTGT+TGG | 0.638577 | 2.3:+34984968 | MS.gene066732:CDS |
ATGTAATCAAAATTGGAAAG+GGG | 0.639132 | 2.3:+34986203 | MS.gene066732:CDS |
TCAAACTCCATTTCCAAGTG+TGG | 0.642402 | 2.3:-34984530 | None:intergenic |
GGACATTGTTGATCTTGGTG+GGG | 0.645736 | 2.3:+34986470 | MS.gene066732:CDS |
AGGCCAACAAATACTCCCAA+CGG | 0.650363 | 2.3:-34985247 | None:intergenic |
GTGTATTGATCTACACGAAG+AGG | 0.652482 | 2.3:+34985549 | MS.gene066732:CDS |
TGCTCCAAAGAGGGTAGACG+CGG | 0.660484 | 2.3:+34984674 | MS.gene066732:CDS |
GTGAATGATATCGTGCAACA+GGG | 0.667513 | 2.3:+34984482 | MS.gene066732:CDS |
TCATCACCACCTATGGACAC+CGG | 0.690966 | 2.3:+34984273 | MS.gene066732:CDS |
ATTATGATAACAGCAAGGAG+CGG | 0.694152 | 2.3:+34986013 | MS.gene066732:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTATAATGAGTATAGT+AGG | + | chr2.3:34984573-34984592 | MS.gene066732:CDS | 15.0% |
!!! | ATGAATATTTTGAAAGTATT+CGG | + | chr2.3:34984337-34984356 | MS.gene066732:intron | 15.0% |
!! | AACAATATATACTAAAACGT+TGG | + | chr2.3:34986160-34986179 | MS.gene066732:CDS | 20.0% |
!! | ATCAATTGCAAATGAAAAAA+AGG | + | chr2.3:34986437-34986456 | MS.gene066732:CDS | 20.0% |
!! | ATTATAAAATTCATATGCCA+AGG | - | chr2.3:34984564-34984583 | None:intergenic | 20.0% |
!! | CACAAATGATAAATGATTAT+GGG | + | chr2.3:34985167-34985186 | MS.gene066732:CDS | 20.0% |
!! | GTTTAAGAAATTTGAAAGAA+GGG | + | chr2.3:34985974-34985993 | MS.gene066732:CDS | 20.0% |
!! | TATTCACATTATCTAGAAAA+TGG | - | chr2.3:34984424-34984443 | None:intergenic | 20.0% |
!! | TGTTTAAGAAATTTGAAAGA+AGG | + | chr2.3:34985973-34985992 | MS.gene066732:CDS | 20.0% |
!!! | ACTAATTCATGAAAATCTTT+TGG | - | chr2.3:34984938-34984957 | None:intergenic | 20.0% |
!!! | AGCAAATAACAAACATATTT+TGG | + | chr2.3:34985137-34985156 | MS.gene066732:CDS | 20.0% |
!!! | ATCTTTTTCATTTTCAATCT+TGG | - | chr2.3:34985868-34985887 | None:intergenic | 20.0% |
!!! | GCAAATAACAAACATATTTT+GGG | + | chr2.3:34985138-34985157 | MS.gene066732:CDS | 20.0% |
! | ACAGACAAACAATTGTTTAT+GGG | + | chr2.3:34985278-34985297 | MS.gene066732:CDS | 25.0% |
! | ATAAATGATTATGGGTACTT+TGG | + | chr2.3:34985175-34985194 | MS.gene066732:CDS | 25.0% |
! | ATCATTTATCATTTGTGCAT+CGG | - | chr2.3:34985164-34985183 | None:intergenic | 25.0% |
! | ATGTAATCAAAATTGGAAAG+GGG | + | chr2.3:34986203-34986222 | MS.gene066732:CDS | 25.0% |
! | CAAATAACCATTGAAAAGAA+TGG | - | chr2.3:34985330-34985349 | None:intergenic | 25.0% |
! | CCTTGAATCGAAAAATATTA+TGG | - | chr2.3:34985642-34985661 | None:intergenic | 25.0% |
! | GACTAAGAGAAAGAAAAAAT+TGG | + | chr2.3:34986593-34986612 | MS.gene066732:CDS | 25.0% |
! | GATGTAATCAAAATTGGAAA+GGG | + | chr2.3:34986202-34986221 | MS.gene066732:CDS | 25.0% |
! | GCAAATAAAAGCAAAAAAGA+TGG | + | chr2.3:34984626-34984645 | MS.gene066732:CDS | 25.0% |
! | GCACAAATGATAAATGATTA+TGG | + | chr2.3:34985166-34985185 | MS.gene066732:CDS | 25.0% |
! | TACAAATTATGATAACAGCA+AGG | + | chr2.3:34986008-34986027 | MS.gene066732:CDS | 25.0% |
! | TGAAACTCATAAAAGAATGA+AGG | - | chr2.3:34985103-34985122 | None:intergenic | 25.0% |
!! | AAACAATCCATTCTTTTCAA+TGG | + | chr2.3:34985320-34985339 | MS.gene066732:CDS | 25.0% |
!! | ATAATGTTTCTAAAGACTCA+TGG | + | chr2.3:34985614-34985633 | MS.gene066732:CDS | 25.0% |
!! | ATTCTTATTTGTCTTGAATG+TGG | - | chr2.3:34985221-34985240 | None:intergenic | 25.0% |
!! | ATTCTTTTATGAGTTTCAGA+TGG | + | chr2.3:34985105-34985124 | MS.gene066732:CDS | 25.0% |
!! | TTTTCGATTCAAGGAAAAAT+GGG | + | chr2.3:34985648-34985667 | MS.gene066732:CDS | 25.0% |
!!! | CCATAATATTTTTCGATTCA+AGG | + | chr2.3:34985639-34985658 | MS.gene066732:CDS | 25.0% |
!!! | CGTTTTAGTATATATTGTTG+AGG | - | chr2.3:34986159-34986178 | None:intergenic | 25.0% |
!!! | TTTTATTTGCATATTCTCGA+CGG | - | chr2.3:34984616-34984635 | None:intergenic | 25.0% |
!!! | TTTTTCGATTCAAGGAAAAA+TGG | + | chr2.3:34985647-34985666 | MS.gene066732:CDS | 25.0% |
AAATAAGAATTATCGTCCGT+TGG | + | chr2.3:34985231-34985250 | MS.gene066732:CDS | 30.0% | |
AATAAGAATTATCGTCCGTT+GGG | + | chr2.3:34985232-34985251 | MS.gene066732:CDS | 30.0% | |
AATGAGTATAGTAGGAAATG+TGG | + | chr2.3:34984581-34984600 | MS.gene066732:CDS | 30.0% | |
ACGTGATTACTTAACAAAAG+AGG | + | chr2.3:34984706-34984725 | MS.gene066732:CDS | 30.0% | |
ATCATATAAACATACTCAGC+TGG | - | chr2.3:34984845-34984864 | None:intergenic | 30.0% | |
ATGAGACTCTTCATAAACTT+TGG | - | chr2.3:34986346-34986365 | None:intergenic | 30.0% | |
ATTCATCAGCCAATACAATT+TGG | - | chr2.3:34984904-34984923 | None:intergenic | 30.0% | |
CACAGACAAACAATTGTTTA+TGG | + | chr2.3:34985277-34985296 | MS.gene066732:CDS | 30.0% | |
CAGACAAACAATTGTTTATG+GGG | + | chr2.3:34985279-34985298 | MS.gene066732:CDS | 30.0% | |
CATAAACAATTGTTTGTCTG+TGG | - | chr2.3:34985279-34985298 | None:intergenic | 30.0% | |
GAATATTACATCCAATCCAA+TGG | + | chr2.3:34984439-34984458 | MS.gene066732:CDS | 30.0% | |
GCTTAGATAGGACTAAAAAA+AGG | + | chr2.3:34986517-34986536 | MS.gene066732:CDS | 30.0% | |
GGATGTAATCAAAATTGGAA+AGG | + | chr2.3:34986201-34986220 | MS.gene066732:CDS | 30.0% | |
GGTTAGGATGTAATCAAAAT+TGG | + | chr2.3:34986196-34986215 | MS.gene066732:CDS | 30.0% | |
TGAAAAAAAGGATCAGAATG+TGG | + | chr2.3:34986449-34986468 | MS.gene066732:CDS | 30.0% | |
TGGAATTCCTCAAAAATTCT+TGG | - | chr2.3:34985925-34985944 | None:intergenic | 30.0% | |
TGGATAAAAAGAGACAGAAA+AGG | + | chr2.3:34986562-34986581 | MS.gene066732:CDS | 30.0% | |
TTCATCAGCCAATACAATTT+GGG | - | chr2.3:34984903-34984922 | None:intergenic | 30.0% | |
! | GTATGGTTATTTCACTTGAT+CGG | + | chr2.3:34984762-34984781 | MS.gene066732:CDS | 30.0% |
! | TATAGTAGGAAATGTGGTTT+TGG | + | chr2.3:34984587-34984606 | MS.gene066732:CDS | 30.0% |
! | TATGCTGACTAAAAAGTCTA+TGG | + | chr2.3:34986380-34986399 | MS.gene066732:CDS | 30.0% |
! | TGATCTGTTAGAATGGTTTT+AGG | - | chr2.3:34985385-34985404 | None:intergenic | 30.0% |
! | TTACACTCCAAGAATTTTTG+AGG | + | chr2.3:34985915-34985934 | MS.gene066732:CDS | 30.0% |
!!! | AAGAAGAATTTTTGAGTGGA+TGG | + | chr2.3:34985572-34985591 | MS.gene066732:CDS | 30.0% |
!!! | AGAAGAATTTTTGAGTGGAT+GGG | + | chr2.3:34985573-34985592 | MS.gene066732:CDS | 30.0% |
AAAATTTGTGTGCTCCAAAG+AGG | + | chr2.3:34984664-34984683 | MS.gene066732:CDS | 35.0% | |
AAATTTGTGTGCTCCAAAGA+GGG | + | chr2.3:34984665-34984684 | MS.gene066732:CDS | 35.0% | |
AATGTGGACATTGTTGATCT+TGG | + | chr2.3:34986465-34986484 | MS.gene066732:CDS | 35.0% | |
ACAAGCATCCCAAATTGTAT+TGG | + | chr2.3:34984892-34984911 | MS.gene066732:CDS | 35.0% | |
ATAGATGATTCACATGCCTT+AGG | - | chr2.3:34985492-34985511 | None:intergenic | 35.0% | |
ATTATGATAACAGCAAGGAG+CGG | + | chr2.3:34986013-34986032 | MS.gene066732:CDS | 35.0% | |
ATTCAAGGAAAAATGGGCAT+GGG | + | chr2.3:34985654-34985673 | MS.gene066732:CDS | 35.0% | |
ATTTCACTTGATCGGAAGAT+TGG | + | chr2.3:34984770-34984789 | MS.gene066732:CDS | 35.0% | |
CACAATCCATGAAATGTTTC+TGG | - | chr2.3:34985445-34985464 | None:intergenic | 35.0% | |
CTGACTAAAAAGTCTATGGA+TGG | + | chr2.3:34986384-34986403 | MS.gene066732:CDS | 35.0% | |
CTTCTGTCTTGACTCATATT+CGG | - | chr2.3:34985842-34985861 | None:intergenic | 35.0% | |
GAAAGGGGAACATATTGAAT+TGG | + | chr2.3:34986218-34986237 | MS.gene066732:CDS | 35.0% | |
GAATTAGTGTCAAAACAAGC+TGG | + | chr2.3:34984950-34984969 | MS.gene066732:CDS | 35.0% | |
GACAAAGAACAAAGTCTTAC+CGG | - | chr2.3:34984295-34984314 | None:intergenic | 35.0% | |
GACATTCCTCATATTCATCT+TGG | - | chr2.3:34985945-34985964 | None:intergenic | 35.0% | |
GATAGTAGTAGGGAATCATA+TGG | + | chr2.3:34986035-34986054 | MS.gene066732:CDS | 35.0% | |
GGAATTCCAAGATGAATATG+AGG | + | chr2.3:34985936-34985955 | MS.gene066732:CDS | 35.0% | |
TAATGTACCACACTTGGAAA+TGG | + | chr2.3:34984523-34984542 | MS.gene066732:CDS | 35.0% | |
TAGATGATTCACATGCCTTA+GGG | - | chr2.3:34985491-34985510 | None:intergenic | 35.0% | |
TAGTCCTATCTAAGCAATCT+CGG | - | chr2.3:34986512-34986531 | None:intergenic | 35.0% | |
TAGTGCGAAGCAAATTTCTA+TGG | - | chr2.3:34985009-34985028 | None:intergenic | 35.0% | |
TCGGAAGATTGGAAAATACA+AGG | + | chr2.3:34984781-34984800 | MS.gene066732:CDS | 35.0% | |
TCTTGGAGTGTAAACATTAC+CGG | - | chr2.3:34985908-34985927 | None:intergenic | 35.0% | |
TGCATCTTGATCTGTTAGAA+TGG | - | chr2.3:34985392-34985411 | None:intergenic | 35.0% | |
TGTTAGTAATGTACCACACT+TGG | + | chr2.3:34984517-34984536 | MS.gene066732:CDS | 35.0% | |
TTGTTTGTCTGTGGCTATTA+AGG | - | chr2.3:34985270-34985289 | None:intergenic | 35.0% | |
! | CACTTTGAAAGAGTTGTCAA+CGG | + | chr2.3:34985793-34985812 | MS.gene066732:CDS | 35.0% |
! | GAAATTTGCTTCGCACTAAA+AGG | + | chr2.3:34985011-34985030 | MS.gene066732:CDS | 35.0% |
! | GGTTGAAGGTGTAGAAAAAT+TGG | + | chr2.3:34984460-34984479 | MS.gene066732:CDS | 35.0% |
! | TGTCGAAAATTTGAGACACA+TGG | + | chr2.3:34986078-34986097 | MS.gene066732:CDS | 35.0% |
! | TTTTCTACACCTTCAACCAT+TGG | - | chr2.3:34984458-34984477 | None:intergenic | 35.0% |
!! | ATTGTATTGGCTGATGAATC+TGG | + | chr2.3:34984905-34984924 | MS.gene066732:CDS | 35.0% |
!! | CTAAAAAAAGGCATCCAACT+TGG | + | chr2.3:34986529-34986548 | MS.gene066732:CDS | 35.0% |
!! | GAGGAAGAAGAATTTTTGAG+TGG | + | chr2.3:34985568-34985587 | MS.gene066732:CDS | 35.0% |
AAAGAGTTGTCAACGGAAAG+CGG | + | chr2.3:34985800-34985819 | MS.gene066732:CDS | 40.0% | |
AACAGATCAAGATGCAGCAA+TGG | + | chr2.3:34985396-34985415 | MS.gene066732:CDS | 40.0% | |
AACAGGATGTTTAGCACGTA+TGG | + | chr2.3:34984745-34984764 | MS.gene066732:CDS | 40.0% | |
ACATAAGGGAAAATGCCCTA+AGG | + | chr2.3:34985473-34985492 | MS.gene066732:CDS | 40.0% | |
ACATCCAATCCAATGGTTGA+AGG | + | chr2.3:34984446-34984465 | MS.gene066732:CDS | 40.0% | |
ACCTTTCTCAAAGCAATGTG+TGG | + | chr2.3:34985352-34985371 | MS.gene066732:CDS | 40.0% | |
ATTGTGCACTTGGCACATAA+GGG | + | chr2.3:34985459-34985478 | MS.gene066732:CDS | 40.0% | |
CCTTTCTCAAAGCAATGTGT+GGG | + | chr2.3:34985353-34985372 | MS.gene066732:CDS | 40.0% | |
CTAAAAGGAACCACTCACTA+AGG | + | chr2.3:34985026-34985045 | MS.gene066732:CDS | 40.0% | |
GATTCAAGGAAAAATGGGCA+TGG | + | chr2.3:34985653-34985672 | MS.gene066732:CDS | 40.0% | |
GTCATGCCAGAAACATTTCA+TGG | + | chr2.3:34985436-34985455 | MS.gene066732:CDS | 40.0% | |
GTGAATGATATCGTGCAACA+GGG | + | chr2.3:34984482-34984501 | MS.gene066732:CDS | 40.0% | |
TACACCTTCAACCATTGGAT+TGG | - | chr2.3:34984453-34984472 | None:intergenic | 40.0% | |
TCAAACTCCATTTCCAAGTG+TGG | - | chr2.3:34984533-34984552 | None:intergenic | 40.0% | |
TCACTAAGGTATGGTGAAGT+AGG | + | chr2.3:34985040-34985059 | MS.gene066732:CDS | 40.0% | |
TCCAATTTCTCAAGCCAAGT+TGG | - | chr2.3:34986546-34986565 | None:intergenic | 40.0% | |
TCTATGGATGGAGAGTCAAT+TGG | + | chr2.3:34986396-34986415 | MS.gene066732:CDS | 40.0% | |
TGGACATTGTTGATCTTGGT+GGG | + | chr2.3:34986469-34986488 | MS.gene066732:CDS | 40.0% | |
TTAGTGTCAAAACAAGCTGG+TGG | + | chr2.3:34984953-34984972 | MS.gene066732:CDS | 40.0% | |
TTGCTCAATTTAACTGCTCG+AGG | - | chr2.3:34986285-34986304 | None:intergenic | 40.0% | |
! | CATTTCATGGATTGTGCACT+TGG | + | chr2.3:34985449-34985468 | MS.gene066732:CDS | 40.0% |
! | GTGTATTGATCTACACGAAG+AGG | + | chr2.3:34985549-34985568 | MS.gene066732:CDS | 40.0% |
! | TCCAACTTGGCTTGAGAAAT+TGG | + | chr2.3:34986542-34986561 | MS.gene066732:CDS | 40.0% |
!!! | AGAATTTTTGAGTGGATGGG+AGG | + | chr2.3:34985576-34985595 | MS.gene066732:CDS | 40.0% |
AAAGTCTTACCGGTGTCCAT+AGG | - | chr2.3:34984285-34984304 | None:intergenic | 45.0% | |
AACGTTGGACAAGAGATGCA+AGG | + | chr2.3:34986175-34986194 | MS.gene066732:CDS | 45.0% | |
AGAGCCGAGATTGCTTAGAT+AGG | + | chr2.3:34986505-34986524 | MS.gene066732:CDS | 45.0% | |
AGGAACCACTCACTAAGGTA+TGG | + | chr2.3:34985031-34985050 | MS.gene066732:CDS | 45.0% | |
AGGCCAACAAATACTCCCAA+CGG | - | chr2.3:34985250-34985269 | None:intergenic | 45.0% | |
ATCCCTATGCTTGTACAAGC+CGG | + | chr2.3:34985886-34985905 | MS.gene066732:CDS | 45.0% | |
CTTCACCATACCTTAGTGAG+TGG | - | chr2.3:34985039-34985058 | None:intergenic | 45.0% | |
GATTGTGCACTTGGCACATA+AGG | + | chr2.3:34985458-34985477 | MS.gene066732:CDS | 45.0% | |
GCTGGTGGAATAAACACTGT+TGG | + | chr2.3:34984968-34984987 | MS.gene066732:CDS | 45.0% | |
GGAAATGGAGTTTGAGTCTG+AGG | + | chr2.3:34984538-34984557 | MS.gene066732:CDS | 45.0% | |
GGACATTGTTGATCTTGGTG+GGG | + | chr2.3:34986470-34986489 | MS.gene066732:CDS | 45.0% | |
GGTGAATGATATCGTGCAAC+AGG | + | chr2.3:34984481-34984500 | MS.gene066732:CDS | 45.0% | |
GTGGACATTGTTGATCTTGG+TGG | + | chr2.3:34986468-34986487 | MS.gene066732:CDS | 45.0% | |
TCAAGATGCAGCAATGGCTA+AGG | + | chr2.3:34985402-34985421 | MS.gene066732:CDS | 45.0% | |
TCACCATTCATCACCACCTA+TGG | + | chr2.3:34984266-34984285 | MS.gene066732:CDS | 45.0% | |
TGGACAAGAGATGCAAGGTT+AGG | + | chr2.3:34986180-34986199 | MS.gene066732:CDS | 45.0% | |
! | TGTCCATAGGTGGTGATGAA+TGG | - | chr2.3:34984272-34984291 | None:intergenic | 45.0% |
!! | CCCACACATTGCTTTGAGAA+AGG | - | chr2.3:34985356-34985375 | None:intergenic | 45.0% |
!! | TACCGGCTTGTACAAGCATA+GGG | - | chr2.3:34985891-34985910 | None:intergenic | 45.0% |
!! | TTACCGGCTTGTACAAGCAT+AGG | - | chr2.3:34985892-34985911 | None:intergenic | 45.0% |
AGCAAGGAGCGGATAGTAGT+AGG | + | chr2.3:34986024-34986043 | MS.gene066732:CDS | 50.0% | |
CATACTCAGCTGGCAGAAGA+AGG | - | chr2.3:34984835-34984854 | None:intergenic | 50.0% | |
GCAAGGAGCGGATAGTAGTA+GGG | + | chr2.3:34986025-34986044 | MS.gene066732:CDS | 50.0% | |
GCTCGAGCAGAAACTAGAAC+AGG | + | chr2.3:34984728-34984747 | MS.gene066732:CDS | 50.0% | |
TCATCACCACCTATGGACAC+CGG | + | chr2.3:34984273-34984292 | MS.gene066732:CDS | 50.0% | |
!! | CGTCCGTTGGGAGTATTTGT+TGG | + | chr2.3:34985244-34985263 | MS.gene066732:CDS | 50.0% |
AACACCGCGTCTACCCTCTT+TGG | - | chr2.3:34984681-34984700 | None:intergenic | 55.0% | |
GTCTTACCGGTGTCCATAGG+TGG | - | chr2.3:34984282-34984301 | None:intergenic | 55.0% | |
TGCTCCAAAGAGGGTAGACG+CGG | + | chr2.3:34984674-34984693 | MS.gene066732:CDS | 55.0% | |
! | GGAGTTTGAGTCTGAGGCCT+TGG | + | chr2.3:34984544-34984563 | MS.gene066732:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 34984228 | 34986629 | 34984228 | ID=MS.gene066732 |
chr2.3 | mRNA | 34984228 | 34986629 | 34984228 | ID=MS.gene066732.t1;Parent=MS.gene066732 |
chr2.3 | exon | 34984228 | 34984294 | 34984228 | ID=MS.gene066732.t1.exon1;Parent=MS.gene066732.t1 |
chr2.3 | CDS | 34984228 | 34984294 | 34984228 | ID=cds.MS.gene066732.t1;Parent=MS.gene066732.t1 |
chr2.3 | exon | 34984432 | 34986629 | 34984432 | ID=MS.gene066732.t1.exon2;Parent=MS.gene066732.t1 |
chr2.3 | CDS | 34984432 | 34986629 | 34984432 | ID=cds.MS.gene066732.t1;Parent=MS.gene066732.t1 |
Gene Sequence |
Protein sequence |