Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066765.t1 | PNY02937.1 | 28.7 | 275 | 140 | 5 | 9 | 232 | 3 | 272 | 4.50E-16 | 95.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066765.t1 | A0A2K3NIT4 | 28.7 | 275 | 140 | 5 | 9 | 232 | 3 | 272 | 3.2e-16 | 95.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene066765.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066765.t1 | MTR_0010s0290 | 35.354 | 99 | 64 | 0 | 22 | 120 | 34 | 132 | 1.97e-13 | 68.6 |
| MS.gene066765.t1 | MTR_5g078270 | 35.417 | 96 | 62 | 0 | 25 | 120 | 15 | 110 | 4.32e-13 | 67.8 |
| MS.gene066765.t1 | MTR_0010s0320 | 33.010 | 103 | 65 | 1 | 18 | 120 | 3 | 101 | 2.09e-11 | 62.8 |
| MS.gene066765.t1 | MTR_5g071410 | 32.692 | 104 | 67 | 1 | 125 | 228 | 169 | 269 | 4.16e-11 | 61.6 |
| MS.gene066765.t1 | MTR_2g062330 | 26.471 | 136 | 89 | 4 | 97 | 227 | 9 | 138 | 9.62e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 109 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATACATCTTGAACTTAT+TGG | 0.131863 | 2.2:-28609652 | None:intergenic |
| AAATCCAGTAGTATACATTT+TGG | 0.250992 | 2.2:-28609541 | None:intergenic |
| ACCTCTGCAAAGTATATAAT+TGG | 0.257986 | 2.2:+28609936 | MS.gene066765:CDS |
| TAATGTAGCTTAACTCTTAT+AGG | 0.287291 | 2.2:-28609618 | None:intergenic |
| ATTGTTCGCCGTTCTGATCT+TGG | 0.290665 | 2.2:+28610532 | MS.gene066765:CDS |
| GATGGCAATCTCGCAAGTTT+TGG | 0.303736 | 2.2:-28610299 | None:intergenic |
| TTTAATCAGTACATGGAATC+TGG | 0.321958 | 2.2:+28609561 | MS.gene066765:CDS |
| CCTTTCAGCGATGAGGAGTT+TGG | 0.333439 | 2.2:-28608946 | None:intergenic |
| ATTTGTTGGTAACTGGTATA+TGG | 0.336277 | 2.2:+28609461 | MS.gene066765:CDS |
| CGAATGAATTTGTTGGTAAC+TGG | 0.341853 | 2.2:+28609454 | MS.gene066765:CDS |
| AACCTTTACTTGGTGGGTAA+TGG | 0.361499 | 2.2:+28610343 | MS.gene066765:CDS |
| CCATGTACAGATTACCGTTT+GGG | 0.363966 | 2.2:-28609518 | None:intergenic |
| GTACATGGAATCTGGGATTC+AGG | 0.367539 | 2.2:+28609569 | MS.gene066765:CDS |
| TTGTTCGCCGTTCTGATCTT+GGG | 0.380246 | 2.2:+28610533 | MS.gene066765:CDS |
| GATGAGGAGTTTGGCTTTGA+TGG | 0.384101 | 2.2:-28608937 | None:intergenic |
| ATCAAAACAAATACCAGATC+TGG | 0.384432 | 2.2:-28609331 | None:intergenic |
| GTCTAAAATTAACCTTTACT+TGG | 0.409383 | 2.2:+28610333 | MS.gene066765:CDS |
| GCCATGTACAGATTACCGTT+TGG | 0.469181 | 2.2:-28609519 | None:intergenic |
| TAAAAGATCGCACCTCTTTG+AGG | 0.469211 | 2.2:-28608980 | None:intergenic |
| TGAGAAAGTTCTTCCAAGAA+TGG | 0.470210 | 2.2:+28609277 | MS.gene066765:intron |
| AACTGTGATTCATCCAGATC+TGG | 0.470305 | 2.2:+28609318 | MS.gene066765:CDS |
| TAAAATTAACCTTTACTTGG+TGG | 0.480947 | 2.2:+28610336 | MS.gene066765:CDS |
| AAAATTAACCTTTACTTGGT+GGG | 0.482354 | 2.2:+28610337 | MS.gene066765:CDS |
| ATGGCCAAAATGTATACTAC+TGG | 0.484629 | 2.2:+28609537 | MS.gene066765:CDS |
| CAGTTACCAACAAATTCATT+CGG | 0.490186 | 2.2:-28609453 | None:intergenic |
| CTCCATTACCCACCAAGTAA+AGG | 0.494247 | 2.2:-28610345 | None:intergenic |
| CTCCTCATCGCTGAAAGGAA+TGG | 0.513155 | 2.2:+28608951 | MS.gene066765:CDS |
| GAGCTTAGAGCTCATATCAA+TGG | 0.516036 | 2.2:+28609483 | MS.gene066765:CDS |
| TTAATCAGTACATGGAATCT+GGG | 0.516995 | 2.2:+28609562 | MS.gene066765:CDS |
| AAAGGTATCTTACAGATGGC+TGG | 0.523991 | 2.2:+28610422 | MS.gene066765:CDS |
| CTCACAAACAGCTTATCCGT+TGG | 0.525140 | 2.2:-28610508 | None:intergenic |
| CTGGGATTCAGGTGGCACTA+AGG | 0.535418 | 2.2:+28609580 | MS.gene066765:CDS |
| CCCAAACGGTAATCTGTACA+TGG | 0.539142 | 2.2:+28609518 | MS.gene066765:CDS |
| GAATTGCCGAATGAATTTGT+TGG | 0.544891 | 2.2:+28609447 | MS.gene066765:CDS |
| AATAAAAGGTATCTTACAGA+TGG | 0.558531 | 2.2:+28610418 | MS.gene066765:CDS |
| CCAAACTCCTCATCGCTGAA+AGG | 0.570191 | 2.2:+28608946 | MS.gene066765:CDS |
| GGGGAACATACCAGTGATTG+TGG | 0.571355 | 2.2:-28609998 | None:intergenic |
| TTCCATTCCTTTCAGCGATG+AGG | 0.573787 | 2.2:-28608953 | None:intergenic |
| TTTAGACTGTGTGGCTGGGA+TGG | 0.575543 | 2.2:-28610317 | None:intergenic |
| GGATGGATTAAGCTCCCAAA+CGG | 0.575869 | 2.2:+28609504 | MS.gene066765:CDS |
| TACTGGATTTAATCAGTACA+TGG | 0.576769 | 2.2:+28609554 | MS.gene066765:CDS |
| TCCAATTATATACTTTGCAG+AGG | 0.579574 | 2.2:-28609937 | None:intergenic |
| TGGATGAATCACAGTTTCGA+AGG | 0.583297 | 2.2:-28609311 | None:intergenic |
| ATTCAGGTGGCACTAAGGTG+TGG | 0.593911 | 2.2:+28609585 | MS.gene066765:CDS |
| AGGGATAACAAGCTGAGGGT+GGG | 0.610095 | 2.2:+28610457 | MS.gene066765:CDS |
| GAGGGATAACAAGCTGAGGG+TGG | 0.620885 | 2.2:+28610456 | MS.gene066765:CDS |
| TTGTGAGGGATAACAAGCTG+AGG | 0.624951 | 2.2:+28610452 | MS.gene066765:CDS |
| AGATCGCACCTCTTTGAGGA+CGG | 0.629708 | 2.2:-28608976 | None:intergenic |
| TTAGAGCTCATATCAATGGA+TGG | 0.635258 | 2.2:+28609487 | MS.gene066765:CDS |
| GAATGGAACCGTCCTCAAAG+AGG | 0.654779 | 2.2:+28608968 | MS.gene066765:CDS |
| TGTGAGGGATAACAAGCTGA+GGG | 0.669692 | 2.2:+28610453 | MS.gene066765:CDS |
| TAAGCTACATTATCTCGTAG+AGG | 0.673336 | 2.2:+28609629 | MS.gene066765:CDS |
| ATGGCTGGTATGAATTTGTG+AGG | 0.678039 | 2.2:+28610437 | MS.gene066765:CDS |
| CATGGAATCTGGGATTCAGG+TGG | 0.681198 | 2.2:+28609572 | MS.gene066765:CDS |
| CTCTTCACCCAAGATCAGAA+CGG | 0.690450 | 2.2:-28610540 | None:intergenic |
| TGGCTGGTATGAATTTGTGA+GGG | 0.723070 | 2.2:+28610438 | MS.gene066765:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATATGTTATTGATGTA+GGG | + | chr2.2:28609246-28609265 | MS.gene066765:intron | 15.0% |
| !! | TAAACATATATCATTAACAA+TGG | - | chr2.2:28609408-28609427 | None:intergenic | 15.0% |
| !! | TATAAATATGTTATTGATGT+AGG | + | chr2.2:28609245-28609264 | MS.gene066765:intron | 15.0% |
| !! | TCATTAAATGTATAAATGTA+CGG | + | chr2.2:28609103-28609122 | MS.gene066765:intron | 15.0% |
| !!! | GAATATTTTCTCAAAATAAA+AGG | + | chr2.2:28610404-28610423 | MS.gene066765:CDS | 15.0% |
| !!! | GATATATGTTTATTTCTTAT+AGG | + | chr2.2:28609416-28609435 | MS.gene066765:intron | 15.0% |
| !!! | ACAACAACACTTTTAAAAAA+TGG | - | chr2.2:28610076-28610095 | None:intergenic | 20.0% |
| !!! | ATTTTGTCTTAATAAACCAA+CGG | + | chr2.2:28610492-28610511 | MS.gene066765:CDS | 20.0% |
| !!! | CAACAACACTTTTAAAAAAT+GGG | - | chr2.2:28610075-28610094 | None:intergenic | 20.0% |
| ! | AAAATTAACCTTTACTTGGT+GGG | + | chr2.2:28610337-28610356 | MS.gene066765:CDS | 25.0% |
| ! | AACATACATCTTGAACTTAT+TGG | - | chr2.2:28609655-28609674 | None:intergenic | 25.0% |
| ! | GTATTATAACACATCAAAAC+TGG | - | chr2.2:28610047-28610066 | None:intergenic | 25.0% |
| ! | TAAAATTAACCTTTACTTGG+TGG | + | chr2.2:28610336-28610355 | MS.gene066765:CDS | 25.0% |
| ! | TAATGTAGCTTAACTCTTAT+AGG | - | chr2.2:28609621-28609640 | None:intergenic | 25.0% |
| ! | TCATTCATCATATATCCATA+GGG | + | chr2.2:28610145-28610164 | MS.gene066765:intron | 25.0% |
| ! | TTCATTCATCATATATCCAT+AGG | + | chr2.2:28610144-28610163 | MS.gene066765:intron | 25.0% |
| !! | AAATCCAGTAGTATACATTT+TGG | - | chr2.2:28609544-28609563 | None:intergenic | 25.0% |
| !! | AAGTTCAAGATGTATGTTTT+AGG | + | chr2.2:28609657-28609676 | MS.gene066765:CDS | 25.0% |
| !! | ATTAATTTGAATAGCTTCAC+CGG | + | chr2.2:28609158-28609177 | MS.gene066765:intron | 25.0% |
| !! | GTCTAAAATTAACCTTTACT+TGG | + | chr2.2:28610333-28610352 | MS.gene066765:CDS | 25.0% |
| !!! | AATAAAAGGTATCTTACAGA+TGG | + | chr2.2:28610418-28610437 | MS.gene066765:CDS | 25.0% |
| !!! | TATGATGATGTTGATGATAT+TGG | + | chr2.2:28609828-28609847 | MS.gene066765:intron | 25.0% |
| AAAGAAAAAACCACAATCAC+TGG | + | chr2.2:28609988-28610007 | MS.gene066765:CDS | 30.0% | |
| AATTAACATACTCAAGCACA+AGG | - | chr2.2:28610107-28610126 | None:intergenic | 30.0% | |
| ACCACTGAATGTATTGAAAA+GGG | + | chr2.2:28609200-28609219 | MS.gene066765:intron | 30.0% | |
| ACCTCTGCAAAGTATATAAT+TGG | + | chr2.2:28609936-28609955 | MS.gene066765:CDS | 30.0% | |
| ATCAAAACAAATACCAGATC+TGG | - | chr2.2:28609334-28609353 | None:intergenic | 30.0% | |
| ATCCTATGGTTAAACAAAGA+TGG | - | chr2.2:28610022-28610041 | None:intergenic | 30.0% | |
| ATTGTTACCGTGTATATATC+CGG | - | chr2.2:28609180-28609199 | None:intergenic | 30.0% | |
| CAGTTACCAACAAATTCATT+CGG | - | chr2.2:28609456-28609475 | None:intergenic | 30.0% | |
| TACCACTGAATGTATTGAAA+AGG | + | chr2.2:28609199-28609218 | MS.gene066765:intron | 30.0% | |
| TACTGGATTTAATCAGTACA+TGG | + | chr2.2:28609554-28609573 | MS.gene066765:CDS | 30.0% | |
| TCATCATCAGATATGATCAA+TGG | - | chr2.2:28609726-28609745 | None:intergenic | 30.0% | |
| TCCAATTATATACTTTGCAG+AGG | - | chr2.2:28609940-28609959 | None:intergenic | 30.0% | |
| TCCTATGGTTAAACAAAGAT+GGG | - | chr2.2:28610021-28610040 | None:intergenic | 30.0% | |
| TTAATCAGTACATGGAATCT+GGG | + | chr2.2:28609562-28609581 | MS.gene066765:CDS | 30.0% | |
| TTTAATCAGTACATGGAATC+TGG | + | chr2.2:28609561-28609580 | MS.gene066765:CDS | 30.0% | |
| ! | AAGGTTAATTTTAGACTGTG+TGG | - | chr2.2:28610329-28610348 | None:intergenic | 30.0% |
| ! | ACTGATGATAATGATAGTGA+TGG | + | chr2.2:28609884-28609903 | MS.gene066765:intron | 30.0% |
| ! | ATAATGATAGTGATGGTGAT+TGG | + | chr2.2:28609891-28609910 | MS.gene066765:intron | 30.0% |
| ! | GATATTGAAAGTGATGATGA+TGG | + | chr2.2:28609771-28609790 | MS.gene066765:intron | 30.0% |
| !! | ATGATCAATGGATTGTTCAT+CGG | - | chr2.2:28609714-28609733 | None:intergenic | 30.0% |
| !! | ATTTGTTGGTAACTGGTATA+TGG | + | chr2.2:28609461-28609480 | MS.gene066765:CDS | 30.0% |
| !!! | ATGTATGTTTTAGGTGTTGA+TGG | + | chr2.2:28609666-28609685 | MS.gene066765:intron | 30.0% |
| ATGGCCAAAATGTATACTAC+TGG | + | chr2.2:28609537-28609556 | MS.gene066765:CDS | 35.0% | |
| CATCAAAACTGGTAATCCTA+TGG | - | chr2.2:28610036-28610055 | None:intergenic | 35.0% | |
| CCTATGGTTAAACAAAGATG+GGG | - | chr2.2:28610020-28610039 | None:intergenic | 35.0% | |
| GAATTGCCGAATGAATTTGT+TGG | + | chr2.2:28609447-28609466 | MS.gene066765:CDS | 35.0% | |
| TAAGCTACATTATCTCGTAG+AGG | + | chr2.2:28609629-28609648 | MS.gene066765:CDS | 35.0% | |
| TAGTGACTGTATATGACCAT+TGG | + | chr2.2:28610197-28610216 | MS.gene066765:intron | 35.0% | |
| TGAGAAAGTTCTTCCAAGAA+TGG | + | chr2.2:28609277-28609296 | MS.gene066765:intron | 35.0% | |
| TGGTCACAAATCAAATCCAA+TGG | - | chr2.2:28610216-28610235 | None:intergenic | 35.0% | |
| TTAGAGCTCATATCAATGGA+TGG | + | chr2.2:28609487-28609506 | MS.gene066765:CDS | 35.0% | |
| TTATATACTTTGCAGAGGTC+TGG | - | chr2.2:28609935-28609954 | None:intergenic | 35.0% | |
| ! | ACCCTTTTCAATACATTCAG+TGG | - | chr2.2:28609204-28609223 | None:intergenic | 35.0% |
| ! | TAATTTTAGACTGTGTGGCT+GGG | - | chr2.2:28610324-28610343 | None:intergenic | 35.0% |
| ! | TTAATTTTAGACTGTGTGGC+TGG | - | chr2.2:28610325-28610344 | None:intergenic | 35.0% |
| !! | CGAATGAATTTGTTGGTAAC+TGG | + | chr2.2:28609454-28609473 | MS.gene066765:CDS | 35.0% |
| !!! | GGATTTAGCTTTTCCATTCT+TGG | - | chr2.2:28609293-28609312 | None:intergenic | 35.0% |
| !!! | TATGTTTTAGGTGTTGATGG+TGG | + | chr2.2:28609669-28609688 | MS.gene066765:intron | 35.0% |
| AACTGTGATTCATCCAGATC+TGG | + | chr2.2:28609318-28609337 | MS.gene066765:CDS | 40.0% | |
| AGCTTCACCGGATATATACA+CGG | + | chr2.2:28609170-28609189 | MS.gene066765:intron | 40.0% | |
| ATGGCTGGTATGAATTTGTG+AGG | + | chr2.2:28610437-28610456 | MS.gene066765:CDS | 40.0% | |
| CCATGTACAGATTACCGTTT+GGG | - | chr2.2:28609521-28609540 | None:intergenic | 40.0% | |
| GAGCTTAGAGCTCATATCAA+TGG | + | chr2.2:28609483-28609502 | MS.gene066765:CDS | 40.0% | |
| GGTGAAGCATATGAAAGTGA+GGG | + | chr2.2:28609792-28609811 | MS.gene066765:intron | 40.0% | |
| GTATACGAGGATGACGAATT+TGG | - | chr2.2:28609007-28609026 | None:intergenic | 40.0% | |
| TAAAAGATCGCACCTCTTTG+AGG | - | chr2.2:28608983-28609002 | None:intergenic | 40.0% | |
| TACGAATCTCTCTCTGTTCT+AGG | + | chr2.2:28609024-28609043 | MS.gene066765:intron | 40.0% | |
| TGGATGAATCACAGTTTCGA+AGG | - | chr2.2:28609314-28609333 | None:intergenic | 40.0% | |
| TGGCTGGTATGAATTTGTGA+GGG | + | chr2.2:28610438-28610457 | MS.gene066765:CDS | 40.0% | |
| TGGTGAAGCATATGAAAGTG+AGG | + | chr2.2:28609791-28609810 | MS.gene066765:intron | 40.0% | |
| TGTATGTGTGTGTGTGTGTA+TGG | - | chr2.2:28610236-28610255 | None:intergenic | 40.0% | |
| ! | AACCTTTACTTGGTGGGTAA+TGG | + | chr2.2:28610343-28610362 | MS.gene066765:CDS | 40.0% |
| ! | CCCCATCTTTGTTTAACCAT+AGG | + | chr2.2:28610017-28610036 | MS.gene066765:intron | 40.0% |
| !! | AAAGGTATCTTACAGATGGC+TGG | + | chr2.2:28610422-28610441 | MS.gene066765:CDS | 40.0% |
| !! | TTTAGGTGTTGATGGTGGAA+GGG | + | chr2.2:28609674-28609693 | MS.gene066765:intron | 40.0% |
| !!! | TTTTAGGTGTTGATGGTGGA+AGG | + | chr2.2:28609673-28609692 | MS.gene066765:intron | 40.0% |
| ATTGTTCGCCGTTCTGATCT+TGG | + | chr2.2:28610532-28610551 | MS.gene066765:CDS | 45.0% | |
| CAGAGAGAGATTCGTATACG+AGG | - | chr2.2:28609020-28609039 | None:intergenic | 45.0% | |
| CCCAAACGGTAATCTGTACA+TGG | + | chr2.2:28609518-28609537 | MS.gene066765:CDS | 45.0% | |
| CTCACAAACAGCTTATCCGT+TGG | - | chr2.2:28610511-28610530 | None:intergenic | 45.0% | |
| CTCCATTACCCACCAAGTAA+AGG | - | chr2.2:28610348-28610367 | None:intergenic | 45.0% | |
| GCCATGTACAGATTACCGTT+TGG | - | chr2.2:28609522-28609541 | None:intergenic | 45.0% | |
| TGCAGCACAAGTATTCCCTA+TGG | - | chr2.2:28610163-28610182 | None:intergenic | 45.0% | |
| TGTGAGGGATAACAAGCTGA+GGG | + | chr2.2:28610453-28610472 | MS.gene066765:CDS | 45.0% | |
| TTCCATTCCTTTCAGCGATG+AGG | - | chr2.2:28608956-28608975 | None:intergenic | 45.0% | |
| TTGTGAGGGATAACAAGCTG+AGG | + | chr2.2:28610452-28610471 | MS.gene066765:CDS | 45.0% | |
| TTGTTCGCCGTTCTGATCTT+GGG | + | chr2.2:28610533-28610552 | MS.gene066765:CDS | 45.0% | |
| ! | GATGGCAATCTCGCAAGTTT+TGG | - | chr2.2:28610302-28610321 | None:intergenic | 45.0% |
| ! | GTACATGGAATCTGGGATTC+AGG | + | chr2.2:28609569-28609588 | MS.gene066765:CDS | 45.0% |
| !! | GATGAGGAGTTTGGCTTTGA+TGG | - | chr2.2:28608940-28608959 | None:intergenic | 45.0% |
| !! | GGATGGATTAAGCTCCCAAA+CGG | + | chr2.2:28609504-28609523 | MS.gene066765:CDS | 45.0% |
| !! | ATTTATGTTTATTTATAATA+TGG | + | chr2.2:28609362-28609381 | MS.gene066765:intron | 5.0% |
| !! | TTTATGTTTATTTATAATAT+GGG | + | chr2.2:28609363-28609382 | MS.gene066765:intron | 5.0% |
| AGGGATAACAAGCTGAGGGT+GGG | + | chr2.2:28610457-28610476 | MS.gene066765:CDS | 50.0% | |
| ATTCAGGTGGCACTAAGGTG+TGG | + | chr2.2:28609585-28609604 | MS.gene066765:CDS | 50.0% | |
| CCAAACTCCTCATCGCTGAA+AGG | + | chr2.2:28608946-28608965 | MS.gene066765:CDS | 50.0% | |
| CCTTTCAGCGATGAGGAGTT+TGG | - | chr2.2:28608949-28608968 | None:intergenic | 50.0% | |
| CTCCTCATCGCTGAAAGGAA+TGG | + | chr2.2:28608951-28608970 | MS.gene066765:CDS | 50.0% | |
| GAATGGAACCGTCCTCAAAG+AGG | + | chr2.2:28608968-28608987 | MS.gene066765:CDS | 50.0% | |
| GGGGAACATACCAGTGATTG+TGG | - | chr2.2:28610001-28610020 | None:intergenic | 50.0% | |
| TTTAGACTGTGTGGCTGGGA+TGG | - | chr2.2:28610320-28610339 | None:intergenic | 50.0% | |
| ! | AGATCGCACCTCTTTGAGGA+CGG | - | chr2.2:28608979-28608998 | None:intergenic | 50.0% |
| ! | CATGGAATCTGGGATTCAGG+TGG | + | chr2.2:28609572-28609591 | MS.gene066765:CDS | 50.0% |
| !! | GATGGTGGAAGGGAACAACT+TGG | + | chr2.2:28609684-28609703 | MS.gene066765:intron | 50.0% |
| !! | GCAATCTCGCAAGTTTTGGC+TGG | - | chr2.2:28610298-28610317 | None:intergenic | 50.0% |
| CTGGGATTCAGGTGGCACTA+AGG | + | chr2.2:28609580-28609599 | MS.gene066765:CDS | 55.0% | |
| GAGGGATAACAAGCTGAGGG+TGG | + | chr2.2:28610456-28610475 | MS.gene066765:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 28608928 | 28610558 | 28608928 | ID=MS.gene066765 |
| chr2.2 | mRNA | 28608928 | 28610558 | 28608928 | ID=MS.gene066765.t1;Parent=MS.gene066765 |
| chr2.2 | exon | 28608928 | 28608989 | 28608928 | ID=MS.gene066765.t1.exon1;Parent=MS.gene066765.t1 |
| chr2.2 | CDS | 28608928 | 28608989 | 28608928 | ID=cds.MS.gene066765.t1;Parent=MS.gene066765.t1 |
| chr2.2 | exon | 28609285 | 28609339 | 28609285 | ID=MS.gene066765.t1.exon2;Parent=MS.gene066765.t1 |
| chr2.2 | CDS | 28609285 | 28609339 | 28609285 | ID=cds.MS.gene066765.t1;Parent=MS.gene066765.t1 |
| chr2.2 | exon | 28609438 | 28609678 | 28609438 | ID=MS.gene066765.t1.exon3;Parent=MS.gene066765.t1 |
| chr2.2 | CDS | 28609438 | 28609678 | 28609438 | ID=cds.MS.gene066765.t1;Parent=MS.gene066765.t1 |
| chr2.2 | exon | 28609936 | 28610009 | 28609936 | ID=MS.gene066765.t1.exon4;Parent=MS.gene066765.t1 |
| chr2.2 | CDS | 28609936 | 28610009 | 28609936 | ID=cds.MS.gene066765.t1;Parent=MS.gene066765.t1 |
| chr2.2 | exon | 28610289 | 28610558 | 28610289 | ID=MS.gene066765.t1.exon5;Parent=MS.gene066765.t1 |
| chr2.2 | CDS | 28610289 | 28610558 | 28610289 | ID=cds.MS.gene066765.t1;Parent=MS.gene066765.t1 |
| Gene Sequence |
| Protein sequence |