Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066880.t1 | RHN40605.1 | 94.5 | 348 | 14 | 3 | 1 | 346 | 1 | 345 | 2.40E-175 | 624.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066880.t1 | Q9SAK5 | 52.7 | 366 | 142 | 11 | 4 | 346 | 1 | 358 | 2.8e-79 | 297.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066880.t1 | A0A396GPI2 | 94.5 | 348 | 14 | 3 | 1 | 346 | 1 | 345 | 1.7e-175 | 624.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene066880.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066880.t1 | MTR_6g444980 | 65.039 | 389 | 79 | 18 | 1 | 346 | 1 | 375 | 2.08e-147 | 421 |
MS.gene066880.t1 | MTR_6g444980 | 60.519 | 385 | 76 | 18 | 1 | 346 | 1 | 348 | 4.97e-129 | 373 |
MS.gene066880.t1 | MTR_5g027440 | 44.094 | 254 | 99 | 12 | 13 | 235 | 1 | 242 | 8.88e-52 | 173 |
MS.gene066880.t1 | MTR_2g086450 | 52.941 | 170 | 63 | 2 | 26 | 178 | 35 | 204 | 8.83e-51 | 174 |
MS.gene066880.t1 | MTR_4g081710 | 55.195 | 154 | 61 | 1 | 29 | 174 | 10 | 163 | 1.83e-50 | 171 |
MS.gene066880.t1 | MTR_6g032990 | 41.569 | 255 | 115 | 10 | 29 | 261 | 35 | 277 | 1.88e-50 | 173 |
MS.gene066880.t1 | MTR_5g041350 | 55.414 | 157 | 61 | 2 | 29 | 176 | 8 | 164 | 4.69e-49 | 168 |
MS.gene066880.t1 | MTR_2g027800 | 53.529 | 170 | 67 | 4 | 24 | 183 | 27 | 194 | 1.23e-46 | 160 |
MS.gene066880.t1 | MTR_1g090670 | 52.381 | 168 | 67 | 4 | 15 | 173 | 23 | 186 | 2.36e-45 | 157 |
MS.gene066880.t1 | MTR_7g088070 | 54.545 | 154 | 54 | 5 | 36 | 182 | 50 | 194 | 9.36e-45 | 155 |
MS.gene066880.t1 | MTR_2g027860 | 59.398 | 133 | 51 | 2 | 36 | 167 | 49 | 179 | 9.16e-44 | 154 |
MS.gene066880.t1 | MTR_7g088070 | 53.247 | 154 | 52 | 4 | 36 | 182 | 50 | 190 | 2.56e-43 | 151 |
MS.gene066880.t1 | MTR_2g027800 | 47.191 | 178 | 52 | 4 | 24 | 183 | 27 | 180 | 1.04e-40 | 145 |
MS.gene066880.t1 | MTR_7g098250 | 38.164 | 207 | 109 | 6 | 36 | 236 | 262 | 455 | 4.76e-36 | 136 |
MS.gene066880.t1 | MTR_1g080330 | 40.237 | 169 | 85 | 4 | 2 | 167 | 148 | 303 | 6.24e-34 | 129 |
MS.gene066880.t1 | MTR_7g115530 | 41.722 | 151 | 77 | 3 | 36 | 183 | 218 | 360 | 9.36e-34 | 129 |
MS.gene066880.t1 | MTR_1g053835 | 42.657 | 143 | 71 | 3 | 32 | 171 | 254 | 388 | 5.83e-30 | 119 |
MS.gene066880.t1 | MTR_7g093030 | 40.714 | 140 | 75 | 3 | 36 | 173 | 212 | 345 | 5.46e-29 | 115 |
MS.gene066880.t1 | MTR_1g080330 | 39.865 | 148 | 73 | 4 | 2 | 146 | 148 | 282 | 1.95e-26 | 106 |
MS.gene066880.t1 | MTR_7g115530 | 44.737 | 114 | 54 | 2 | 36 | 146 | 218 | 325 | 4.09e-26 | 106 |
MS.gene066880.t1 | MTR_7g068600 | 43.182 | 132 | 69 | 2 | 36 | 164 | 13 | 141 | 2.83e-25 | 102 |
MS.gene066880.t1 | MTR_1g053800 | 39.103 | 156 | 83 | 2 | 26 | 177 | 167 | 314 | 4.84e-25 | 103 |
MS.gene066880.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 36 | 92 | 218 | 274 | 9.74e-20 | 88.6 |
MS.gene066880.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 36 | 92 | 218 | 274 | 3.67e-19 | 87.8 |
MS.gene066880.t1 | MTR_1g090670 | 46.087 | 115 | 49 | 4 | 68 | 173 | 1 | 111 | 4.28e-19 | 85.1 |
MS.gene066880.t1 | MTR_7g115530 | 66.038 | 53 | 18 | 0 | 36 | 88 | 218 | 270 | 3.60e-18 | 83.6 |
MS.gene066880.t1 | MTR_7g093030 | 57.895 | 57 | 24 | 0 | 36 | 92 | 212 | 268 | 5.91e-18 | 83.2 |
MS.gene066880.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 36 | 86 | 218 | 268 | 3.05e-17 | 81.3 |
MS.gene066880.t1 | MTR_2g023580 | 50.000 | 78 | 37 | 1 | 37 | 112 | 56 | 133 | 8.89e-17 | 79.0 |
MS.gene066880.t1 | MTR_3g450310 | 36.364 | 132 | 62 | 3 | 36 | 158 | 19 | 137 | 3.92e-16 | 76.6 |
MS.gene066880.t1 | MTR_7g069660 | 55.357 | 56 | 25 | 0 | 37 | 92 | 72 | 127 | 1.74e-15 | 77.0 |
MS.gene066880.t1 | MTR_3g064840 | 51.429 | 70 | 34 | 0 | 37 | 106 | 275 | 344 | 2.11e-15 | 77.4 |
MS.gene066880.t1 | MTR_6g071625 | 56.667 | 60 | 26 | 0 | 37 | 96 | 203 | 262 | 2.50e-15 | 76.6 |
MS.gene066880.t1 | MTR_1g112370 | 56.452 | 62 | 22 | 1 | 37 | 93 | 23 | 84 | 3.02e-15 | 75.9 |
MS.gene066880.t1 | MTR_0223s0040 | 62.264 | 53 | 20 | 0 | 37 | 89 | 19 | 71 | 3.86e-15 | 75.1 |
MS.gene066880.t1 | MTR_8g066310 | 58.929 | 56 | 23 | 0 | 37 | 92 | 174 | 229 | 6.87e-15 | 75.1 |
MS.gene066880.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 37 | 92 | 220 | 275 | 8.67e-15 | 75.1 |
MS.gene066880.t1 | MTR_1g053830 | 49.091 | 55 | 28 | 0 | 38 | 92 | 20 | 74 | 1.05e-14 | 69.7 |
MS.gene066880.t1 | MTR_5g041350 | 71.739 | 46 | 13 | 0 | 131 | 176 | 8 | 53 | 1.76e-14 | 72.4 |
MS.gene066880.t1 | MTR_1g021520 | 57.143 | 56 | 24 | 0 | 37 | 92 | 127 | 182 | 1.80e-14 | 73.2 |
MS.gene066880.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 37 | 92 | 112 | 167 | 2.42e-14 | 73.9 |
MS.gene066880.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 37 | 92 | 110 | 165 | 2.45e-14 | 73.9 |
MS.gene066880.t1 | MTR_5g041350 | 71.739 | 46 | 13 | 0 | 131 | 176 | 30 | 75 | 3.13e-14 | 72.0 |
MS.gene066880.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 37 | 92 | 90 | 145 | 3.59e-14 | 73.2 |
MS.gene066880.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 37 | 92 | 90 | 145 | 3.60e-14 | 73.2 |
MS.gene066880.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 37 | 92 | 98 | 153 | 4.22e-14 | 72.4 |
MS.gene066880.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 37 | 92 | 98 | 153 | 4.28e-14 | 73.2 |
MS.gene066880.t1 | MTR_7g093010 | 37.500 | 128 | 68 | 4 | 36 | 158 | 213 | 333 | 4.35e-14 | 72.8 |
MS.gene066880.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 107 | 164 | 1.14e-13 | 72.4 |
MS.gene066880.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 211 | 268 | 1.37e-13 | 72.0 |
MS.gene066880.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 211 | 268 | 1.38e-13 | 72.0 |
MS.gene066880.t1 | MTR_4g064730 | 53.623 | 69 | 30 | 2 | 23 | 90 | 117 | 184 | 2.84e-13 | 70.1 |
MS.gene066880.t1 | MTR_8g086410 | 56.000 | 50 | 22 | 0 | 37 | 86 | 112 | 161 | 3.42e-13 | 70.5 |
MS.gene066880.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 36 | 90 | 131 | 184 | 3.63e-13 | 70.9 |
MS.gene066880.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 37 | 86 | 90 | 139 | 4.29e-13 | 70.1 |
MS.gene066880.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 36 | 90 | 200 | 253 | 4.34e-13 | 70.5 |
MS.gene066880.t1 | MTR_7g089010 | 61.818 | 55 | 20 | 1 | 36 | 90 | 91 | 144 | 5.55e-13 | 68.9 |
MS.gene066880.t1 | MTR_1g093080 | 60.000 | 55 | 22 | 0 | 36 | 90 | 211 | 265 | 9.36e-13 | 68.9 |
MS.gene066880.t1 | MTR_2g034960 | 54.237 | 59 | 26 | 1 | 32 | 90 | 207 | 264 | 2.11e-12 | 68.6 |
MS.gene066880.t1 | MTR_5g017980 | 60.000 | 55 | 22 | 0 | 36 | 90 | 193 | 247 | 2.43e-12 | 67.4 |
MS.gene066880.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 36 | 90 | 198 | 252 | 9.19e-12 | 65.9 |
MS.gene066880.t1 | MTR_4g021790 | 52.542 | 59 | 27 | 1 | 32 | 90 | 164 | 221 | 1.06e-11 | 65.1 |
MS.gene066880.t1 | MTR_4g086835 | 55.172 | 58 | 26 | 0 | 33 | 90 | 271 | 328 | 4.07e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene066880.t1 | AT1G79430 | 54.098 | 366 | 137 | 10 | 4 | 346 | 1 | 358 | 1.94e-113 | 334 |
MS.gene066880.t1 | AT1G79430 | 47.176 | 301 | 129 | 9 | 68 | 346 | 1 | 293 | 1.43e-69 | 219 |
MS.gene066880.t1 | AT3G12730 | 61.453 | 179 | 60 | 3 | 25 | 194 | 12 | 190 | 3.69e-67 | 211 |
MS.gene066880.t1 | AT4G13640 | 58.854 | 192 | 50 | 4 | 26 | 192 | 27 | 214 | 4.32e-64 | 205 |
MS.gene066880.t1 | AT3G24120 | 49.412 | 255 | 96 | 8 | 25 | 264 | 30 | 266 | 1.31e-63 | 204 |
MS.gene066880.t1 | AT4G13640 | 57.949 | 195 | 50 | 5 | 26 | 192 | 27 | 217 | 5.38e-62 | 200 |
MS.gene066880.t1 | AT3G24120 | 48.837 | 258 | 96 | 9 | 25 | 264 | 30 | 269 | 2.20e-61 | 199 |
MS.gene066880.t1 | AT5G18240 | 54.082 | 196 | 70 | 6 | 25 | 207 | 34 | 222 | 3.62e-56 | 188 |
MS.gene066880.t1 | AT5G18240 | 54.082 | 196 | 70 | 6 | 25 | 207 | 34 | 222 | 3.62e-56 | 188 |
MS.gene066880.t1 | AT3G04030 | 58.580 | 169 | 58 | 3 | 25 | 181 | 34 | 202 | 9.81e-56 | 187 |
MS.gene066880.t1 | AT5G18240 | 53.061 | 196 | 70 | 7 | 25 | 207 | 34 | 220 | 8.73e-53 | 179 |
MS.gene066880.t1 | AT3G04030 | 57.396 | 169 | 59 | 4 | 25 | 181 | 34 | 201 | 1.30e-52 | 179 |
MS.gene066880.t1 | AT5G18240 | 51.531 | 196 | 69 | 7 | 25 | 207 | 34 | 216 | 1.86e-49 | 170 |
MS.gene066880.t1 | AT5G18240 | 51.531 | 196 | 69 | 7 | 25 | 207 | 34 | 216 | 1.86e-49 | 170 |
MS.gene066880.t1 | AT3G04030 | 55.621 | 169 | 57 | 4 | 25 | 181 | 34 | 196 | 4.40e-49 | 169 |
MS.gene066880.t1 | AT1G69580 | 49.412 | 170 | 72 | 2 | 29 | 184 | 27 | 196 | 1.55e-47 | 164 |
MS.gene066880.t1 | AT1G69580 | 49.123 | 171 | 72 | 2 | 29 | 184 | 27 | 197 | 2.30e-47 | 163 |
MS.gene066880.t1 | AT5G45580 | 41.629 | 221 | 103 | 6 | 26 | 220 | 13 | 233 | 1.00e-45 | 157 |
MS.gene066880.t1 | AT5G45580 | 41.935 | 217 | 100 | 6 | 30 | 220 | 1 | 217 | 9.74e-45 | 154 |
MS.gene066880.t1 | AT2G01060 | 58.333 | 132 | 53 | 1 | 36 | 167 | 15 | 144 | 2.99e-44 | 154 |
MS.gene066880.t1 | AT3G12730 | 53.676 | 136 | 54 | 3 | 68 | 194 | 1 | 136 | 4.32e-37 | 132 |
MS.gene066880.t1 | AT4G28610 | 39.881 | 168 | 91 | 3 | 36 | 199 | 225 | 386 | 8.73e-34 | 129 |
MS.gene066880.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 1.12e-33 | 129 |
MS.gene066880.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 1.12e-33 | 129 |
MS.gene066880.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 1.12e-33 | 129 |
MS.gene066880.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 168 | 319 | 8.69e-32 | 123 |
MS.gene066880.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 168 | 319 | 8.69e-32 | 123 |
MS.gene066880.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 211 | 362 | 1.67e-31 | 123 |
MS.gene066880.t1 | AT5G06800 | 45.522 | 134 | 70 | 2 | 36 | 167 | 192 | 324 | 3.51e-30 | 119 |
MS.gene066880.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 198 | 329 | 4.09e-30 | 119 |
MS.gene066880.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 198 | 329 | 4.09e-30 | 119 |
MS.gene066880.t1 | AT5G06800 | 46.617 | 133 | 65 | 3 | 36 | 167 | 192 | 319 | 5.13e-30 | 118 |
MS.gene066880.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 238 | 369 | 5.64e-30 | 119 |
MS.gene066880.t1 | AT3G04030 | 52.381 | 126 | 48 | 3 | 68 | 181 | 1 | 126 | 1.51e-28 | 113 |
MS.gene066880.t1 | AT2G20400 | 39.103 | 156 | 93 | 1 | 36 | 191 | 231 | 384 | 1.17e-27 | 112 |
MS.gene066880.t1 | AT2G20400 | 38.365 | 159 | 89 | 2 | 36 | 191 | 231 | 383 | 1.26e-27 | 112 |
MS.gene066880.t1 | AT5G18240 | 43.791 | 153 | 60 | 7 | 68 | 207 | 1 | 140 | 5.07e-23 | 98.2 |
MS.gene066880.t1 | AT3G04030 | 48.413 | 126 | 47 | 4 | 68 | 181 | 1 | 120 | 2.49e-22 | 95.9 |
MS.gene066880.t1 | AT2G01060 | 49.485 | 97 | 47 | 1 | 71 | 167 | 1 | 95 | 4.10e-21 | 91.3 |
MS.gene066880.t1 | AT2G06020 | 59.375 | 64 | 26 | 0 | 29 | 92 | 79 | 142 | 7.93e-21 | 91.7 |
MS.gene066880.t1 | AT5G06800 | 59.649 | 57 | 23 | 0 | 36 | 92 | 192 | 248 | 5.16e-18 | 83.2 |
MS.gene066880.t1 | AT5G29000 | 48.750 | 80 | 38 | 2 | 13 | 92 | 211 | 287 | 2.11e-17 | 82.0 |
MS.gene066880.t1 | AT3G04450 | 56.140 | 57 | 25 | 0 | 36 | 92 | 238 | 294 | 3.74e-17 | 81.3 |
MS.gene066880.t1 | AT1G14600 | 50.685 | 73 | 31 | 1 | 22 | 89 | 4 | 76 | 1.84e-16 | 78.6 |
MS.gene066880.t1 | AT2G40260 | 60.714 | 56 | 22 | 0 | 37 | 92 | 83 | 138 | 4.44e-16 | 79.3 |
MS.gene066880.t1 | AT2G42660 | 58.929 | 56 | 23 | 0 | 37 | 92 | 51 | 106 | 6.16e-16 | 77.0 |
MS.gene066880.t1 | AT4G04605 | 58.491 | 53 | 22 | 0 | 37 | 89 | 15 | 67 | 6.88e-16 | 76.3 |
MS.gene066880.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 35 | 93 | 28 | 86 | 1.59e-15 | 75.9 |
MS.gene066880.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 35 | 93 | 28 | 86 | 1.59e-15 | 75.9 |
MS.gene066880.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 37 | 96 | 214 | 273 | 5.51e-15 | 75.5 |
MS.gene066880.t1 | AT5G16560 | 56.667 | 60 | 26 | 0 | 37 | 96 | 220 | 279 | 5.80e-15 | 75.9 |
MS.gene066880.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 37 | 96 | 214 | 273 | 6.95e-15 | 75.5 |
MS.gene066880.t1 | AT2G38300 | 57.143 | 56 | 24 | 0 | 37 | 92 | 55 | 110 | 7.46e-15 | 75.1 |
MS.gene066880.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 37 | 92 | 106 | 161 | 1.61e-14 | 72.4 |
MS.gene066880.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 37 | 92 | 106 | 161 | 2.24e-14 | 72.8 |
MS.gene066880.t1 | AT4G17695 | 42.857 | 84 | 45 | 1 | 37 | 117 | 165 | 248 | 2.68e-14 | 73.2 |
MS.gene066880.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 4.41e-14 | 72.4 |
MS.gene066880.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 4.41e-14 | 72.4 |
MS.gene066880.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 6.06e-14 | 72.0 |
MS.gene066880.t1 | AT5G59570 | 54.286 | 70 | 28 | 2 | 24 | 90 | 126 | 194 | 9.54e-14 | 71.2 |
MS.gene066880.t1 | AT5G59570 | 54.286 | 70 | 28 | 2 | 24 | 90 | 126 | 194 | 9.54e-14 | 71.2 |
MS.gene066880.t1 | AT5G05090 | 61.818 | 55 | 20 | 1 | 36 | 90 | 81 | 134 | 1.77e-13 | 70.1 |
MS.gene066880.t1 | AT3G10760 | 61.818 | 55 | 20 | 1 | 36 | 90 | 105 | 158 | 2.67e-13 | 70.5 |
MS.gene066880.t1 | AT4G04580 | 47.059 | 68 | 33 | 1 | 37 | 104 | 15 | 79 | 4.58e-13 | 67.0 |
MS.gene066880.t1 | AT2G40970 | 60.000 | 55 | 21 | 1 | 36 | 90 | 105 | 158 | 1.07e-12 | 67.4 |
MS.gene066880.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 38 | 95 | 212 | 269 | 1.09e-12 | 68.6 |
MS.gene066880.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 38 | 95 | 219 | 276 | 1.16e-12 | 68.6 |
MS.gene066880.t1 | AT5G58080 | 31.481 | 162 | 99 | 5 | 33 | 190 | 191 | 344 | 1.42e-12 | 68.9 |
MS.gene066880.t1 | AT3G25790 | 60.000 | 50 | 20 | 0 | 41 | 90 | 201 | 250 | 4.58e-12 | 67.0 |
MS.gene066880.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 167 | 220 | 9.83e-12 | 66.6 |
MS.gene066880.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 237 | 290 | 1.14e-11 | 66.2 |
MS.gene066880.t1 | AT1G49560 | 52.941 | 68 | 31 | 1 | 36 | 102 | 192 | 259 | 1.16e-11 | 65.5 |
MS.gene066880.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 237 | 290 | 1.23e-11 | 66.2 |
MS.gene066880.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 36 | 90 | 135 | 188 | 2.23e-11 | 64.3 |
MS.gene066880.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 36 | 89 | 147 | 199 | 5.31e-11 | 63.9 |
MS.gene066880.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 36 | 89 | 147 | 199 | 6.37e-11 | 63.2 |
MS.gene066880.t1 | AT1G13300 | 54.545 | 55 | 25 | 0 | 36 | 90 | 181 | 235 | 7.12e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTTCCACTTCCATTAAA+AGG | 0.118507 | 8.4:-54404938 | None:intergenic |
TCATTATCATTCCAAATTAT+TGG | 0.120463 | 8.4:-54404962 | None:intergenic |
AATGATTCACCTTTGAAATT+AGG | 0.181239 | 8.4:-54405040 | None:intergenic |
TGATCTTAGGCTTCATGATT+TGG | 0.243321 | 8.4:+54404982 | MS.gene066880:CDS |
ATCATAGTTGAGGGCTTCTT+TGG | 0.252047 | 8.4:-54402818 | None:intergenic |
GTGGAAAGAGTCCAATAATT+TGG | 0.261771 | 8.4:+54404951 | MS.gene066880:CDS |
AATGAAGAAAATTTGTTTGT+TGG | 0.268240 | 8.4:+54404899 | MS.gene066880:CDS |
TTTGGAATGATAATGATCTT+AGG | 0.294293 | 8.4:+54404969 | MS.gene066880:CDS |
GTCCATCGAAGGCGTGGTTT+TGG | 0.310710 | 8.4:-54402902 | None:intergenic |
AAAATACATGCAAAGTATAT+TGG | 0.312337 | 8.4:+54404643 | MS.gene066880:CDS |
ATTCAATGAGCAATCTATTA+AGG | 0.315644 | 8.4:+54403482 | MS.gene066880:CDS |
CAGCATCAACAAAGCGTTCA+TGG | 0.328267 | 8.4:-54402934 | None:intergenic |
CCACCTTAAGAGCCATCTTC+AGG | 0.346223 | 8.4:+54403293 | MS.gene066880:CDS |
GATCTTAGGCTTCATGATTT+GGG | 0.360986 | 8.4:+54404983 | MS.gene066880:CDS |
AAATGAGGAAAATTATTTAG+AGG | 0.363464 | 8.4:-54404773 | None:intergenic |
TTTGAACTGCAAAGAAATAC+TGG | 0.365692 | 8.4:+54403634 | MS.gene066880:CDS |
TAATTTCAAAGGTGAATCAT+TGG | 0.367186 | 8.4:+54405042 | MS.gene066880:CDS |
GAAACAAATTCTTTCATGTC+AGG | 0.374130 | 8.4:-54404749 | None:intergenic |
AAAGCTTATCACACACTTGC+AGG | 0.378431 | 8.4:+54404668 | MS.gene066880:CDS |
ATAGAGAGGCCAACCCTTGA+TGG | 0.379955 | 8.4:+54404851 | MS.gene066880:CDS |
AAAACAATCATGAGGGTTAT+GGG | 0.394376 | 8.4:+54403249 | MS.gene066880:CDS |
GTTGATGCTGTTGCTCAGCT+TGG | 0.397802 | 8.4:+54402947 | MS.gene066880:CDS |
AAACCTGAAGATGGCTCTTA+AGG | 0.399926 | 8.4:-54403296 | None:intergenic |
TTTCAAGATCTTAACATTTG+TGG | 0.407965 | 8.4:+54404794 | MS.gene066880:CDS |
TTGCTCATTGAATTCCTTGT+GGG | 0.416474 | 8.4:-54403472 | None:intergenic |
ACAAATTTCAAGGGTATGAA+TGG | 0.427658 | 8.4:+54404713 | MS.gene066880:CDS |
ATTTGTTTGTTGGAAAGAAA+AGG | 0.433652 | 8.4:+54404909 | MS.gene066880:CDS |
AATGAATATTCTTAACCAAA+TGG | 0.435132 | 8.4:-54405199 | None:intergenic |
GAGCCTCAATCCTCAATTGA+AGG | 0.444605 | 8.4:-54404616 | None:intergenic |
AGCTGCAGCTACAAATTTCA+AGG | 0.446327 | 8.4:+54404703 | MS.gene066880:CDS |
TTTGATCCATCTGTGAAGCT+TGG | 0.458634 | 8.4:+54405127 | MS.gene066880:CDS |
TTCAAAAGCACCTTCAATTG+AGG | 0.460223 | 8.4:+54404606 | MS.gene066880:CDS |
GGTAGAAGCTCATCACCATT+TGG | 0.461218 | 8.4:+54405184 | MS.gene066880:CDS |
GCTGCCACAGCATTGATCAT+AGG | 0.463360 | 8.4:-54405160 | None:intergenic |
GATGCTGTTGCTCAGCTTGG+AGG | 0.468617 | 8.4:+54402950 | MS.gene066880:CDS |
TCTTTCCACTTCCATTAAAA+GGG | 0.471840 | 8.4:-54404937 | None:intergenic |
GATGGCTCTTAAGGTGGTAA+AGG | 0.478682 | 8.4:-54403287 | None:intergenic |
TTGAAATTAGGAACATCATC+AGG | 0.480806 | 8.4:-54405028 | None:intergenic |
TGAGAATTCATCATAGTTGA+GGG | 0.480954 | 8.4:-54402827 | None:intergenic |
ATAGTTGAGGGCTTCTTTGG+AGG | 0.483070 | 8.4:-54402815 | None:intergenic |
TAGGCATTATAATTCCATCA+AGG | 0.485394 | 8.4:-54404865 | None:intergenic |
ATGTGTGTTCAAGGTGACTC+TGG | 0.488847 | 8.4:+54402860 | MS.gene066880:CDS |
GATAGACCCATGTGTGTTCA+AGG | 0.494833 | 8.4:+54402851 | MS.gene066880:CDS |
CATTAATAGAAATTTAGGCT+TGG | 0.499746 | 8.4:+54403441 | MS.gene066880:intron |
AGGCATTATAATTCCATCAA+GGG | 0.502907 | 8.4:-54404864 | None:intergenic |
TAGTTGAGGGCTTCTTTGGA+GGG | 0.504455 | 8.4:-54402814 | None:intergenic |
TTTGTGTTCAAACCTGAAGA+TGG | 0.506495 | 8.4:-54403305 | None:intergenic |
GCACCTTCAATTGAGGATTG+AGG | 0.506889 | 8.4:+54404613 | MS.gene066880:CDS |
GATGATGTTCCTAATTTCAA+AGG | 0.507643 | 8.4:+54405031 | MS.gene066880:CDS |
ATGATCAATGCTGTGGCAGC+TGG | 0.512611 | 8.4:+54405163 | MS.gene066880:CDS |
ATGGCTCTTAAGGTGGTAAA+GGG | 0.519319 | 8.4:-54403286 | None:intergenic |
ATCCAAAACCACGCCTTCGA+TGG | 0.522449 | 8.4:+54402900 | MS.gene066880:CDS |
ATTATAATTCCATCAAGGGT+TGG | 0.522631 | 8.4:-54404860 | None:intergenic |
GGCACCTCGTCTTCTATGAC+TGG | 0.530737 | 8.4:+54403655 | MS.gene066880:CDS |
CACACTTGCAGGTGAAAACA+TGG | 0.531497 | 8.4:+54404679 | MS.gene066880:CDS |
ATGTTAAGATCTTGAAAATG+AGG | 0.534145 | 8.4:-54404788 | None:intergenic |
ATGAGAATTCATCATAGTTG+AGG | 0.541419 | 8.4:-54402828 | None:intergenic |
TTGGATCAGTGGTGAGGACA+AGG | 0.541614 | 8.4:-54402883 | None:intergenic |
CATGAGGGTTATGGGTGTGA+AGG | 0.546666 | 8.4:+54403257 | MS.gene066880:CDS |
AAACAAATTCTTTCATGTCA+GGG | 0.546749 | 8.4:-54404748 | None:intergenic |
GTTATTCCAAGCTTCACAGA+TGG | 0.570892 | 8.4:-54405133 | None:intergenic |
GGAGTTCGACGGTCCATCGA+AGG | 0.577331 | 8.4:-54402913 | None:intergenic |
TCGACGGTCCATCGAAGGCG+TGG | 0.581352 | 8.4:-54402908 | None:intergenic |
AATGAGCAATCTATTAAGGA+TGG | 0.585044 | 8.4:+54403486 | MS.gene066880:CDS |
ATTGCTCATTGAATTCCTTG+TGG | 0.590023 | 8.4:-54403473 | None:intergenic |
ATGAGGGTTATGGGTGTGAA+GGG | 0.590465 | 8.4:+54403258 | MS.gene066880:CDS |
CCTGAAGATGGCTCTTAAGG+TGG | 0.594196 | 8.4:-54403293 | None:intergenic |
AAGGGTATGAATGGAACTCA+AGG | 0.599882 | 8.4:+54404722 | MS.gene066880:CDS |
AGAGTCACCTTGAACACACA+TGG | 0.606753 | 8.4:-54402858 | None:intergenic |
TGCTCATTGAATTCCTTGTG+GGG | 0.607189 | 8.4:-54403471 | None:intergenic |
TCTATTAAGGATGGTATGAG+AGG | 0.614631 | 8.4:+54403495 | MS.gene066880:CDS |
GCTTGGAAAGCAACCCCACA+AGG | 0.615422 | 8.4:+54403458 | MS.gene066880:CDS |
ATCTTCATCACAACATAGAG+AGG | 0.631722 | 8.4:+54404837 | MS.gene066880:CDS |
CAATTGAGGATTGAGGCTCA+AGG | 0.648335 | 8.4:+54404620 | MS.gene066880:CDS |
GCTGCAGCTACAAATTTCAA+GGG | 0.661788 | 8.4:+54404704 | MS.gene066880:CDS |
AAGACTGCATGAACAGCTAG+AGG | 0.664015 | 8.4:+54404142 | MS.gene066880:CDS |
ATTACCTATGATCAATGCTG+TGG | 0.664522 | 8.4:+54405156 | MS.gene066880:CDS |
AAAGCGTTCATGGAGTTCGA+CGG | 0.684910 | 8.4:-54402924 | None:intergenic |
GCGACCAGTCATAGAAGACG+AGG | 0.697663 | 8.4:-54403659 | None:intergenic |
GAGTCACCTTGAACACACAT+GGG | 0.714712 | 8.4:-54402857 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATTAAATTAAAATGC+AGG | - | chr8.4:54403943-54403962 | None:intergenic | 10.0% |
!! | TAAATAAATTAAGAATCAAA+AGG | - | chr8.4:54403711-54403730 | None:intergenic | 10.0% |
!! | TCTTCATTATTATTATTATT+AGG | - | chr8.4:54404887-54404906 | None:intergenic | 10.0% |
!! | TTAGAAAATAAAAATACTTA+AGG | - | chr8.4:54403543-54403562 | None:intergenic | 10.0% |
!! | ATAAAATCAAAGAACTTAAA+AGG | - | chr8.4:54403412-54403431 | None:intergenic | 15.0% |
!! | TAAAATCAAAGAACTTAAAA+GGG | - | chr8.4:54403411-54403430 | None:intergenic | 15.0% |
!! | TAAAGAAAGAAAAGAATAAA+AGG | - | chr8.4:54402997-54403016 | None:intergenic | 15.0% |
!!! | CAATAAAATTTTTTACGATT+TGG | + | chr8.4:54403976-54403995 | MS.gene066880:intron | 15.0% |
!!! | TTTTATTCTTTTCTTTCTTT+AGG | + | chr8.4:54402996-54403015 | MS.gene066880:intron | 15.0% |
!!! | TTTTGCATTAATAGAAATTT+AGG | + | chr8.4:54403436-54403455 | MS.gene066880:intron | 15.0% |
!! | AAAATACATGCAAAGTATAT+TGG | + | chr8.4:54404643-54404662 | MS.gene066880:CDS | 20.0% |
!! | AAATGAGGAAAATTATTTAG+AGG | - | chr8.4:54404776-54404795 | None:intergenic | 20.0% |
!! | CATATTATAATGAGAAACTT+TGG | + | chr8.4:54404015-54404034 | MS.gene066880:intron | 20.0% |
!! | TCATTATCATTCCAAATTAT+TGG | - | chr8.4:54404965-54404984 | None:intergenic | 20.0% |
!! | TTTCAATAAAGATTTGAACT+CGG | - | chr8.4:54404455-54404474 | None:intergenic | 20.0% |
!!! | AAAGTTAGTTTCTAATTTCT+AGG | + | chr8.4:54404292-54404311 | MS.gene066880:intron | 20.0% |
!!! | AATGAAGAAAATTTGTTTGT+TGG | + | chr8.4:54404899-54404918 | MS.gene066880:CDS | 20.0% |
!!! | TTAATTTGTAGGTTTATTTG+TGG | + | chr8.4:54404579-54404598 | MS.gene066880:intron | 20.0% |
!!! | TTTCAATATTAGTTTACTTG+TGG | - | chr8.4:54403750-54403769 | None:intergenic | 20.0% |
! | AAACAAATTCTTTCATGTCA+GGG | - | chr8.4:54404751-54404770 | None:intergenic | 25.0% |
! | AAATAACAAAGTGATTGAGT+TGG | + | chr8.4:54404390-54404409 | MS.gene066880:intron | 25.0% |
! | AGTTAGTAGTTATTATATGC+AGG | - | chr8.4:54403899-54403918 | None:intergenic | 25.0% |
! | ATGTTAAGATCTTGAAAATG+AGG | - | chr8.4:54404791-54404810 | None:intergenic | 25.0% |
! | ATTCAATGAGCAATCTATTA+AGG | + | chr8.4:54403482-54403501 | MS.gene066880:CDS | 25.0% |
! | CATTAATAGAAATTTAGGCT+TGG | + | chr8.4:54403441-54403460 | MS.gene066880:intron | 25.0% |
! | CTAAATGAGGTAAAGAAATT+TGG | - | chr8.4:54403345-54403364 | None:intergenic | 25.0% |
! | GATTACTAAAATTTCTCTCT+AGG | + | chr8.4:54404517-54404536 | MS.gene066880:intron | 25.0% |
! | GGATTAAGACAAAAAATATG+TGG | + | chr8.4:54404538-54404557 | MS.gene066880:intron | 25.0% |
! | TAATCTATAGTTCAATCAGA+AGG | - | chr8.4:54404502-54404521 | None:intergenic | 25.0% |
! | TAATTTCAAAGGTGAATCAT+TGG | + | chr8.4:54405042-54405061 | MS.gene066880:CDS | 25.0% |
! | TTACTCATCACAAAATTTAG+TGG | - | chr8.4:54403103-54403122 | None:intergenic | 25.0% |
! | TTATAATGAGAAACTTTGGT+TGG | + | chr8.4:54404019-54404038 | MS.gene066880:intron | 25.0% |
! | TTTCAAGATCTTAACATTTG+TGG | + | chr8.4:54404794-54404813 | MS.gene066880:CDS | 25.0% |
!! | AGACTAAAAGTATATAGAAG+AGG | - | chr8.4:54403787-54403806 | None:intergenic | 25.0% |
!! | ATTTGTTTGTTGGAAAGAAA+AGG | + | chr8.4:54404909-54404928 | MS.gene066880:CDS | 25.0% |
!! | GACTAAAAGTATATAGAAGA+GGG | - | chr8.4:54403786-54403805 | None:intergenic | 25.0% |
!! | TATATAGAGCTAGTGTTTTA+TGG | + | chr8.4:54404191-54404210 | MS.gene066880:intron | 25.0% |
!! | TTTGGAATGATAATGATCTT+AGG | + | chr8.4:54404969-54404988 | MS.gene066880:CDS | 25.0% |
!!! | AATGATTCACCTTTGAAATT+AGG | - | chr8.4:54405043-54405062 | None:intergenic | 25.0% |
!!! | TTTTGTTTTCATGACAGTTT+CGG | + | chr8.4:54403609-54403628 | MS.gene066880:intron | 25.0% |
AAAAACAATCATGAGGGTTA+TGG | + | chr8.4:54403248-54403267 | MS.gene066880:CDS | 30.0% | |
AAAACAATCATGAGGGTTAT+GGG | + | chr8.4:54403249-54403268 | MS.gene066880:CDS | 30.0% | |
AAAATATGTGGTGCAAATGT+TGG | + | chr8.4:54404550-54404569 | MS.gene066880:intron | 30.0% | |
AACCGTAACTAAAACTTTGT+TGG | + | chr8.4:54404082-54404101 | MS.gene066880:intron | 30.0% | |
AATGAGCAATCTATTAAGGA+TGG | + | chr8.4:54403486-54403505 | MS.gene066880:CDS | 30.0% | |
ACACTATACATATGATCTTG+TGG | - | chr8.4:54404217-54404236 | None:intergenic | 30.0% | |
AGATCATATGTATAGTGTTC+AGG | + | chr8.4:54404219-54404238 | MS.gene066880:intron | 30.0% | |
AGGCATTATAATTCCATCAA+GGG | - | chr8.4:54404867-54404886 | None:intergenic | 30.0% | |
ATGAGAATTCATCATAGTTG+AGG | - | chr8.4:54402831-54402850 | None:intergenic | 30.0% | |
ATTATAATTCCATCAAGGGT+TGG | - | chr8.4:54404863-54404882 | None:intergenic | 30.0% | |
CTACAAATTAACACACAAGA+GGG | - | chr8.4:54403218-54403237 | None:intergenic | 30.0% | |
GAAACAAATTCTTTCATGTC+AGG | - | chr8.4:54404752-54404771 | None:intergenic | 30.0% | |
GATGATGTTCCTAATTTCAA+AGG | + | chr8.4:54405031-54405050 | MS.gene066880:CDS | 30.0% | |
TAGGCATTATAATTCCATCA+AGG | - | chr8.4:54404868-54404887 | None:intergenic | 30.0% | |
TCAAAGAACTTAAAAGGGAA+AGG | - | chr8.4:54403406-54403425 | None:intergenic | 30.0% | |
TCACAAAAGTGAACTAAATG+AGG | - | chr8.4:54403358-54403377 | None:intergenic | 30.0% | |
TCTACAAATTAACACACAAG+AGG | - | chr8.4:54403219-54403238 | None:intergenic | 30.0% | |
TCTTTCCACTTCCATTAAAA+GGG | - | chr8.4:54404940-54404959 | None:intergenic | 30.0% | |
TGAGAATTCATCATAGTTGA+GGG | - | chr8.4:54402830-54402849 | None:intergenic | 30.0% | |
TTAGTTACGGTTACATACAA+TGG | - | chr8.4:54404074-54404093 | None:intergenic | 30.0% | |
TTGAAATTAGGAACATCATC+AGG | - | chr8.4:54405031-54405050 | None:intergenic | 30.0% | |
TTTGAACTGCAAAGAAATAC+TGG | + | chr8.4:54403634-54403653 | MS.gene066880:CDS | 30.0% | |
TTTGACCGACATAAAATACT+CGG | - | chr8.4:54404373-54404392 | None:intergenic | 30.0% | |
! | AAAAGGACTAACCCTTTTAA+TGG | + | chr8.4:54404926-54404945 | MS.gene066880:CDS | 30.0% |
! | ACAAATTTCAAGGGTATGAA+TGG | + | chr8.4:54404713-54404732 | MS.gene066880:CDS | 30.0% |
! | ATAACCCTCATGATTGTTTT+TGG | - | chr8.4:54403249-54403268 | None:intergenic | 30.0% |
! | ATTAGTTTACTTGTGGTTGA+GGG | - | chr8.4:54403743-54403762 | None:intergenic | 30.0% |
! | CTTTTCCGAGTATTTTATGT+CGG | + | chr8.4:54404365-54404384 | MS.gene066880:intron | 30.0% |
! | TATTAGTTTACTTGTGGTTG+AGG | - | chr8.4:54403744-54403763 | None:intergenic | 30.0% |
!! | TTGGTTTGTAAACTTCACTA+AGG | + | chr8.4:54404409-54404428 | MS.gene066880:intron | 30.0% |
!!! | CACCAACAAAGTTTTAGTTA+CGG | - | chr8.4:54404087-54404106 | None:intergenic | 30.0% |
ATCTTCATCACAACATAGAG+AGG | + | chr8.4:54404837-54404856 | MS.gene066880:CDS | 35.0% | |
ATGCAGGAAAATACATGTTG+AGG | - | chr8.4:54403927-54403946 | None:intergenic | 35.0% | |
ATTACCTATGATCAATGCTG+TGG | + | chr8.4:54405156-54405175 | MS.gene066880:CDS | 35.0% | |
ATTGCTCATTGAATTCCTTG+TGG | - | chr8.4:54403476-54403495 | None:intergenic | 35.0% | |
CACTCCAAAAACAATCATGA+GGG | + | chr8.4:54403242-54403261 | MS.gene066880:CDS | 35.0% | |
CGTAACTAAAACTTTGTTGG+TGG | + | chr8.4:54404085-54404104 | MS.gene066880:intron | 35.0% | |
CTCTTTCCACTTCCATTAAA+AGG | - | chr8.4:54404941-54404960 | None:intergenic | 35.0% | |
GATCTTAGGCTTCATGATTT+GGG | + | chr8.4:54404983-54405002 | MS.gene066880:CDS | 35.0% | |
GTGGAAAGAGTCCAATAATT+TGG | + | chr8.4:54404951-54404970 | MS.gene066880:CDS | 35.0% | |
TCTATTAAGGATGGTATGAG+AGG | + | chr8.4:54403495-54403514 | MS.gene066880:CDS | 35.0% | |
TGATCTTAGGCTTCATGATT+TGG | + | chr8.4:54404982-54405001 | MS.gene066880:CDS | 35.0% | |
TTGCTCATTGAATTCCTTGT+GGG | - | chr8.4:54403475-54403494 | None:intergenic | 35.0% | |
TTTGTAGGTTTATTTGTGGC+AGG | + | chr8.4:54404583-54404602 | MS.gene066880:intron | 35.0% | |
TTTGTGTTCAAACCTGAAGA+TGG | - | chr8.4:54403308-54403327 | None:intergenic | 35.0% | |
! | ACTAACCCTTTTAATGGAAG+TGG | + | chr8.4:54404932-54404951 | MS.gene066880:CDS | 35.0% |
!! | GTTGGAAGTGCTTAATTTGT+AGG | + | chr8.4:54404568-54404587 | MS.gene066880:intron | 35.0% |
!! | TTCAAAAGCACCTTCAATTG+AGG | + | chr8.4:54404606-54404625 | MS.gene066880:CDS | 35.0% |
!!! | ACATTTTAGGATGCAAATGG+AGG | + | chr8.4:54404112-54404131 | MS.gene066880:intron | 35.0% |
!!! | GCAACATTTTAGGATGCAAA+TGG | + | chr8.4:54404109-54404128 | MS.gene066880:intron | 35.0% |
AAACCTGAAGATGGCTCTTA+AGG | - | chr8.4:54403299-54403318 | None:intergenic | 40.0% | |
AAAGCTTATCACACACTTGC+AGG | + | chr8.4:54404668-54404687 | MS.gene066880:CDS | 40.0% | |
AGCTGCAGCTACAAATTTCA+AGG | + | chr8.4:54404703-54404722 | MS.gene066880:CDS | 40.0% | |
AGGAGAAGATGAGTACTATC+AGG | - | chr8.4:54402977-54402996 | None:intergenic | 40.0% | |
ATCATAGTTGAGGGCTTCTT+TGG | - | chr8.4:54402821-54402840 | None:intergenic | 40.0% | |
ATGGCTCTTAAGGTGGTAAA+GGG | - | chr8.4:54403289-54403308 | None:intergenic | 40.0% | |
CCACTCCAAAAACAATCATG+AGG | + | chr8.4:54403241-54403260 | MS.gene066880:CDS | 40.0% | |
GCTGCAGCTACAAATTTCAA+GGG | + | chr8.4:54404704-54404723 | MS.gene066880:CDS | 40.0% | |
GTTATTCCAAGCTTCACAGA+TGG | - | chr8.4:54405136-54405155 | None:intergenic | 40.0% | |
TGCTCATTGAATTCCTTGTG+GGG | - | chr8.4:54403474-54403493 | None:intergenic | 40.0% | |
TTTGATCCATCTGTGAAGCT+TGG | + | chr8.4:54405127-54405146 | MS.gene066880:CDS | 40.0% | |
! | AAGGGTATGAATGGAACTCA+AGG | + | chr8.4:54404722-54404741 | MS.gene066880:CDS | 40.0% |
!!! | CCTCATGATTGTTTTTGGAG+TGG | - | chr8.4:54403244-54403263 | None:intergenic | 40.0% |
!!! | TGTTGGTGGTGCAACATTTT+AGG | + | chr8.4:54404099-54404118 | MS.gene066880:intron | 40.0% |
AAGACTGCATGAACAGCTAG+AGG | + | chr8.4:54404142-54404161 | MS.gene066880:CDS | 45.0% | |
AGAGTCACCTTGAACACACA+TGG | - | chr8.4:54402861-54402880 | None:intergenic | 45.0% | |
ATAGTTGAGGGCTTCTTTGG+AGG | - | chr8.4:54402818-54402837 | None:intergenic | 45.0% | |
ATGAGGGTTATGGGTGTGAA+GGG | + | chr8.4:54403258-54403277 | MS.gene066880:CDS | 45.0% | |
ATGTGTGTTCAAGGTGACTC+TGG | + | chr8.4:54402860-54402879 | MS.gene066880:CDS | 45.0% | |
CAATTGAGGATTGAGGCTCA+AGG | + | chr8.4:54404620-54404639 | MS.gene066880:CDS | 45.0% | |
CACACTTGCAGGTGAAAACA+TGG | + | chr8.4:54404679-54404698 | MS.gene066880:CDS | 45.0% | |
GAGCCTCAATCCTCAATTGA+AGG | - | chr8.4:54404619-54404638 | None:intergenic | 45.0% | |
GAGTCACCTTGAACACACAT+GGG | - | chr8.4:54402860-54402879 | None:intergenic | 45.0% | |
GATAGACCCATGTGTGTTCA+AGG | + | chr8.4:54402851-54402870 | MS.gene066880:CDS | 45.0% | |
GATGGCTCTTAAGGTGGTAA+AGG | - | chr8.4:54403290-54403309 | None:intergenic | 45.0% | |
GCACCTTCAATTGAGGATTG+AGG | + | chr8.4:54404613-54404632 | MS.gene066880:CDS | 45.0% | |
GGTAGAAGCTCATCACCATT+TGG | + | chr8.4:54405184-54405203 | MS.gene066880:CDS | 45.0% | |
TAGTTGAGGGCTTCTTTGGA+GGG | - | chr8.4:54402817-54402836 | None:intergenic | 45.0% | |
! | AAAGCGTTCATGGAGTTCGA+CGG | - | chr8.4:54402927-54402946 | None:intergenic | 45.0% |
! | CAGCATCAACAAAGCGTTCA+TGG | - | chr8.4:54402937-54402956 | None:intergenic | 45.0% |
ATAGAGAGGCCAACCCTTGA+TGG | + | chr8.4:54404851-54404870 | MS.gene066880:CDS | 50.0% | |
ATCCAAAACCACGCCTTCGA+TGG | + | chr8.4:54402900-54402919 | MS.gene066880:CDS | 50.0% | |
ATGATCAATGCTGTGGCAGC+TGG | + | chr8.4:54405163-54405182 | MS.gene066880:CDS | 50.0% | |
CATGAGGGTTATGGGTGTGA+AGG | + | chr8.4:54403257-54403276 | MS.gene066880:CDS | 50.0% | |
CCACCTTAAGAGCCATCTTC+AGG | + | chr8.4:54403293-54403312 | MS.gene066880:CDS | 50.0% | |
CCTGAAGATGGCTCTTAAGG+TGG | - | chr8.4:54403296-54403315 | None:intergenic | 50.0% | |
GTTGATGCTGTTGCTCAGCT+TGG | + | chr8.4:54402947-54402966 | MS.gene066880:CDS | 50.0% | |
TTGGATCAGTGGTGAGGACA+AGG | - | chr8.4:54402886-54402905 | None:intergenic | 50.0% | |
!! | GCTGCCACAGCATTGATCAT+AGG | - | chr8.4:54405163-54405182 | None:intergenic | 50.0% |
!!! | AAGGCGTGGTTTTGGATCAG+TGG | - | chr8.4:54402897-54402916 | None:intergenic | 50.0% |
!!! | GTGGTTTTGGATCAGTGGTG+AGG | - | chr8.4:54402892-54402911 | None:intergenic | 50.0% |
GATGCTGTTGCTCAGCTTGG+AGG | + | chr8.4:54402950-54402969 | MS.gene066880:CDS | 55.0% | |
GCGACCAGTCATAGAAGACG+AGG | - | chr8.4:54403662-54403681 | None:intergenic | 55.0% | |
GCTTGGAAAGCAACCCCACA+AGG | + | chr8.4:54403458-54403477 | MS.gene066880:CDS | 55.0% | |
GGCACCTCGTCTTCTATGAC+TGG | + | chr8.4:54403655-54403674 | MS.gene066880:CDS | 55.0% | |
!! | GTCCATCGAAGGCGTGGTTT+TGG | - | chr8.4:54402905-54402924 | None:intergenic | 55.0% |
GGAGTTCGACGGTCCATCGA+AGG | - | chr8.4:54402916-54402935 | None:intergenic | 60.0% | |
TCGACGGTCCATCGAAGGCG+TGG | - | chr8.4:54402911-54402930 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 54402800 | 54405210 | 54402800 | ID=MS.gene066880 |
chr8.4 | mRNA | 54402800 | 54405210 | 54402800 | ID=MS.gene066880.t1;Parent=MS.gene066880 |
chr8.4 | exon | 54402800 | 54402980 | 54402800 | ID=MS.gene066880.t1.exon1;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54402800 | 54402980 | 54402800 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
chr8.4 | exon | 54403238 | 54403314 | 54403238 | ID=MS.gene066880.t1.exon2;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54403238 | 54403314 | 54403238 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
chr8.4 | exon | 54403450 | 54403516 | 54403450 | ID=MS.gene066880.t1.exon3;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54403450 | 54403516 | 54403450 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
chr8.4 | exon | 54403626 | 54403692 | 54403626 | ID=MS.gene066880.t1.exon4;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54403626 | 54403692 | 54403626 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
chr8.4 | exon | 54404121 | 54404163 | 54404121 | ID=MS.gene066880.t1.exon5;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54404121 | 54404163 | 54404121 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
chr8.4 | exon | 54404605 | 54405210 | 54404605 | ID=MS.gene066880.t1.exon6;Parent=MS.gene066880.t1 |
chr8.4 | CDS | 54404605 | 54405210 | 54404605 | ID=cds.MS.gene066880.t1;Parent=MS.gene066880.t1 |
Gene Sequence |
Protein sequence |