AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066901

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066901.t1 MTR_8g446990 96.435 533 12 3 8 537 1 529 0.0 1060
MS.gene066901.t1 MTR_2g062850 66.288 528 156 9 21 537 49 565 0.0 691
MS.gene066901.t1 MTR_2g027240 63.741 433 143 6 114 537 177 604 0.0 564
MS.gene066901.t1 MTR_7g081665 59.861 431 156 8 116 537 339 761 1.68e-180 526
MS.gene066901.t1 MTR_6g004720 57.359 462 172 8 80 537 190 630 1.85e-179 519
MS.gene066901.t1 MTR_8g006870 60.930 430 157 7 116 537 345 771 2.32e-178 521
MS.gene066901.t1 MTR_7g033640 64.359 390 122 6 114 491 205 589 1.16e-175 509
MS.gene066901.t1 MTR_7g104180 51.378 508 215 12 15 496 347 848 2.68e-157 471
MS.gene066901.t1 MTR_3g010260 53.864 427 178 7 116 537 390 802 2.26e-154 461
MS.gene066901.t1 MTR_1g060790 55.825 412 167 6 116 519 445 849 2.97e-154 462
MS.gene066901.t1 MTR_4g113790 50.505 396 172 6 116 491 66 457 1.21e-130 390
MS.gene066901.t1 MTR_2g085065 51.604 374 161 5 122 483 68 433 4.43e-123 369
MS.gene066901.t1 MTR_2g018990 48.205 390 169 6 115 491 56 425 1.63e-117 355
MS.gene066901.t1 MTR_8g089420 47.570 391 173 8 115 491 51 423 6.29e-115 348
MS.gene066901.t1 MTR_8g070530 44.764 382 165 6 116 496 572 908 1.55e-103 332
MS.gene066901.t1 MTR_2g069990 44.330 388 180 9 110 490 61 419 3.00e-103 319
MS.gene066901.t1 MTR_2g095980 44.133 392 177 4 116 504 346 698 7.12e-103 325
MS.gene066901.t1 MTR_2g095980 43.702 389 183 4 116 504 601 953 1.95e-100 325
MS.gene066901.t1 MTR_2g095980 43.367 392 180 4 116 504 601 953 2.09e-100 325
MS.gene066901.t1 MTR_4g061610 41.623 382 167 6 116 494 619 947 9.76e-91 299
MS.gene066901.t1 MTR_8g011780 39.891 366 190 10 138 491 14 361 2.00e-76 248
MS.gene066901.t1 MTR_4g065080 35.904 415 211 9 139 522 10 400 3.02e-73 239
MS.gene066901.t1 MTR_2g098240 38.398 362 182 8 135 491 8 333 3.52e-72 235
MS.gene066901.t1 MTR_7g053200 36.088 363 206 8 139 492 8 353 1.44e-64 216
MS.gene066901.t1 MTR_5g069000 33.159 383 207 9 123 502 745 1081 2.18e-55 201
MS.gene066901.t1 MTR_4g035835 32.637 383 209 9 123 502 741 1077 2.17e-54 198
MS.gene066901.t1 MTR_1g442790 33.146 356 200 9 144 495 110 431 5.50e-53 188
MS.gene066901.t1 MTR_1g442790 33.146 356 200 9 144 495 110 431 6.39e-53 188
MS.gene066901.t1 MTR_7g097150 32.402 358 198 10 144 495 120 439 4.00e-51 183
MS.gene066901.t1 MTR_6g470940 31.720 372 208 7 135 502 868 1197 7.12e-51 188
MS.gene066901.t1 MTR_1g075880 32.961 358 197 10 144 495 117 437 8.35e-51 182
MS.gene066901.t1 MTR_1g069735 31.707 369 208 10 133 495 109 439 1.36e-50 180
MS.gene066901.t1 MTR_3g104700 33.430 344 190 9 144 479 94 406 2.14e-50 181
MS.gene066901.t1 MTR_1g069735 31.707 369 208 10 133 495 109 439 2.63e-50 180
MS.gene066901.t1 MTR_1g069735 31.707 369 208 10 133 495 109 439 8.94e-50 180
MS.gene066901.t1 MTR_2g040150 33.724 341 193 9 144 479 113 425 5.58e-49 177
MS.gene066901.t1 MTR_1g019340 30.337 356 206 9 133 482 97 416 4.00e-48 175
MS.gene066901.t1 MTR_1g019340 30.337 356 206 8 133 482 97 416 8.04e-48 173
MS.gene066901.t1 MTR_3g104700 31.856 361 190 10 144 479 94 423 3.27e-47 172
MS.gene066901.t1 MTR_1g042700 30.081 369 219 9 131 495 102 435 6.66e-47 171
MS.gene066901.t1 MTR_1g090917 31.373 357 180 8 133 488 40 332 6.61e-40 151
MS.gene066901.t1 MTR_1g090917 36.538 156 97 1 133 288 40 193 2.50e-27 115
MS.gene066901.t1 MTR_1g090917 35.417 144 87 3 349 488 191 332 4.86e-14 75.1
MS.gene066901.t1 MTR_7g073520 41.216 148 85 1 144 291 148 293 1.92e-26 112
MS.gene066901.t1 MTR_7g073520 41.593 113 63 2 368 479 299 409 1.87e-20 94.7
MS.gene066901.t1 MTR_4g107280 38.462 156 85 4 144 291 89 241 6.08e-25 107
MS.gene066901.t1 MTR_4g107280 36.207 116 71 2 370 484 249 362 1.70e-19 91.3
MS.gene066901.t1 MTR_1g090917 30.258 271 124 8 219 488 1 207 1.55e-24 105
MS.gene066901.t1 MTR_1g090917 30.258 271 124 8 219 488 1 207 2.01e-24 105
MS.gene066901.t1 MTR_8g035890 25.602 332 168 6 144 475 16 268 3.07e-24 102
MS.gene066901.t1 MTR_6g012990 26.239 343 173 9 134 475 9 272 4.46e-22 98.2
MS.gene066901.t1 MTR_3g088715 38.346 133 71 2 343 475 5 126 4.57e-22 92.4
MS.gene066901.t1 MTR_6g048250 26.023 342 173 9 134 474 9 271 7.01e-22 97.8
MS.gene066901.t1 MTR_6g012990 26.239 343 173 9 134 475 9 272 9.91e-22 99.0
MS.gene066901.t1 MTR_6g048250 25.731 342 174 8 134 474 9 271 1.75e-21 97.4
MS.gene066901.t1 MTR_6g048250 26.023 342 173 9 134 474 9 271 2.16e-21 97.8
MS.gene066901.t1 MTR_3g099920 25.656 343 175 10 134 475 9 272 5.99e-21 96.3
MS.gene066901.t1 MTR_4g107280 36.207 116 71 2 370 484 210 323 1.26e-19 91.3
MS.gene066901.t1 MTR_4g107280 31.757 148 67 4 144 291 89 202 1.10e-13 73.2
MS.gene066901.t1 MTR_4g132070 27.139 339 159 13 144 474 91 349 1.45e-19 92.4
MS.gene066901.t1 MTR_4g107490 23.041 434 203 12 53 480 29 337 1.84e-19 92.0
MS.gene066901.t1 MTR_8g040300 24.471 331 171 7 144 474 10 261 4.81e-19 87.8
MS.gene066901.t1 MTR_3g110405 29.412 187 118 3 144 318 37 221 5.61e-18 85.1
MS.gene066901.t1 MTR_2g020380 32.680 153 95 3 141 293 1 145 1.09e-17 87.4
MS.gene066901.t1 MTR_4g131060 23.708 329 179 6 135 463 9 265 1.29e-17 85.9
MS.gene066901.t1 MTR_8g086380 32.121 165 105 3 129 291 11 170 2.50e-17 85.5
MS.gene066901.t1 MTR_2g045470 31.098 164 111 2 128 291 4 165 1.14e-16 83.2
MS.gene066901.t1 MTR_3g099767 35.526 152 88 3 150 300 118 260 1.48e-16 82.8
MS.gene066901.t1 MTR_5g026960 27.679 336 186 12 143 475 3 284 1.93e-16 82.4
MS.gene066901.t1 MTR_2g049790 29.814 161 108 2 134 291 10 168 3.56e-16 81.6
MS.gene066901.t1 MTR_6g087000 32.847 137 86 4 367 500 909 1042 5.27e-16 82.0
MS.gene066901.t1 MTR_3g466480 32.450 151 99 1 141 291 18 165 8.12e-16 80.1
MS.gene066901.t1 MTR_4g029020 30.769 156 105 1 136 291 4 156 1.37e-15 79.7
MS.gene066901.t1 MTR_8g024590 26.380 163 118 1 142 304 15 175 2.78e-15 78.6
MS.gene066901.t1 MTR_4g051648 28.571 154 104 3 141 291 5 155 3.98e-15 79.3
MS.gene066901.t1 MTR_5g089320 32.026 153 98 3 144 292 68 218 5.24e-15 78.2
MS.gene066901.t1 MTR_1g096490 31.818 154 99 3 143 292 29 180 5.50e-15 77.8
MS.gene066901.t1 MTR_5g075100 33.766 154 94 4 141 291 20 168 5.88e-15 77.4
MS.gene066901.t1 MTR_5g045190 27.632 152 107 2 144 295 239 387 5.97e-15 78.6
MS.gene066901.t1 MTR_8g024600 25.455 165 121 1 142 306 15 177 6.09e-15 77.4
MS.gene066901.t1 MTR_3g051770 29.843 191 116 7 109 292 55 234 7.81e-15 77.8
MS.gene066901.t1 MTR_0028s0170 23.810 336 176 11 144 475 78 337 8.23e-15 77.4
MS.gene066901.t1 MTR_1g101630 32.500 160 101 4 136 291 34 190 8.94e-15 77.4
MS.gene066901.t1 MTR_4g128820 30.921 152 103 2 140 291 6 155 1.09e-14 76.6
MS.gene066901.t1 MTR_3g072320 30.065 153 100 3 139 291 9 154 1.32e-14 76.3
MS.gene066901.t1 MTR_5g067150 27.333 150 107 1 142 291 7 154 1.62e-14 75.9
MS.gene066901.t1 MTR_5g067150 27.333 150 107 1 142 291 7 154 1.64e-14 76.3
MS.gene066901.t1 MTR_5g067150 27.333 150 107 1 142 291 7 154 1.80e-14 75.5
MS.gene066901.t1 MTR_2g005290 26.531 343 168 14 148 474 14 288 2.17e-14 75.5
MS.gene066901.t1 MTR_3g466400 28.000 175 116 2 138 312 8 172 2.18e-14 75.9
MS.gene066901.t1 MTR_4g114670 26.974 152 109 1 140 291 7 156 3.12e-14 74.7
MS.gene066901.t1 MTR_4g006970 28.313 166 116 1 126 291 2 164 3.95e-14 75.1
MS.gene066901.t1 MTR_4g006970 36.220 127 69 5 349 474 159 274 4.12e-11 65.5
MS.gene066901.t1 MTR_4g114670 26.974 152 109 1 140 291 7 156 4.25e-14 75.1
MS.gene066901.t1 MTR_1g103760 30.769 143 96 1 148 290 16 155 4.73e-14 74.7
MS.gene066901.t1 MTR_3g096230 29.762 168 114 2 136 301 236 401 5.26e-14 75.1
MS.gene066901.t1 MTR_1g081000 28.667 150 105 2 143 291 3 151 5.36e-14 75.1
MS.gene066901.t1 MTR_1g081000 28.667 150 105 2 143 291 3 151 5.45e-14 75.1
MS.gene066901.t1 MTR_3g096230 29.762 168 114 2 136 301 236 401 7.44e-14 74.7
MS.gene066901.t1 MTR_8g071230 26.786 336 189 12 143 475 3 284 8.14e-14 73.9
MS.gene066901.t1 MTR_1g077800 31.902 163 107 3 130 291 1 160 9.43e-14 74.3
MS.gene066901.t1 MTR_4g019410 24.432 352 185 13 127 474 2 276 9.79e-14 74.3
MS.gene066901.t1 MTR_1g077800 31.902 163 107 3 130 291 1 160 1.19e-13 74.3
MS.gene066901.t1 MTR_2g100030 23.714 350 197 9 139 475 13 305 1.23e-13 73.9
MS.gene066901.t1 MTR_1g071480 28.289 152 103 3 143 291 3 151 1.26e-13 73.9
MS.gene066901.t1 MTR_4g019410 24.432 352 185 13 127 474 2 276 1.28e-13 74.3
MS.gene066901.t1 MTR_5g022030 30.263 152 102 2 144 291 99 250 1.33e-13 73.9
MS.gene066901.t1 MTR_1g041150 30.811 185 116 6 113 292 91 268 1.64e-13 73.6
MS.gene066901.t1 MTR_5g022030 30.263 152 102 2 144 291 99 250 1.82e-13 73.2
MS.gene066901.t1 MTR_7g113490 34.416 154 92 4 144 291 68 218 1.95e-13 73.6
MS.gene066901.t1 MTR_4g088745 36.634 101 64 0 191 291 94 194 2.59e-13 72.0
MS.gene066901.t1 MTR_1g100250 32.215 149 91 3 148 291 415 558 2.74e-13 73.2
MS.gene066901.t1 MTR_7g072575 29.054 148 102 1 144 291 12 156 2.82e-13 72.4
MS.gene066901.t1 MTR_3g101210 32.237 152 100 2 142 291 305 455 2.84e-13 73.2
MS.gene066901.t1 MTR_5g017830 28.819 288 176 12 16 291 17 287 2.98e-13 72.8
MS.gene066901.t1 MTR_4g088755 36.634 101 64 0 191 291 89 189 3.13e-13 71.6
MS.gene066901.t1 MTR_3g101210 32.237 152 100 2 142 291 305 455 3.64e-13 72.4
MS.gene066901.t1 MTR_1g080020 28.082 146 101 2 144 288 9 151 3.72e-13 70.5
MS.gene066901.t1 MTR_1g076370 28.931 159 97 4 141 291 17 167 3.82e-13 72.0
MS.gene066901.t1 MTR_1g013700 29.677 155 106 1 137 291 6 157 3.91e-13 71.6
MS.gene066901.t1 MTR_8g095440 30.065 153 101 3 144 292 30 180 4.11e-13 71.6
MS.gene066901.t1 MTR_7g095450 26.667 150 108 2 143 291 3 151 4.63e-13 72.4
MS.gene066901.t1 MTR_1g048630 34.906 106 63 2 373 478 162 261 4.70e-13 72.8
MS.gene066901.t1 MTR_1g048630 28.125 160 111 3 144 303 7 162 6.22e-12 68.9
MS.gene066901.t1 MTR_4g066660 32.544 169 105 6 128 291 57 221 5.16e-13 72.0
MS.gene066901.t1 MTR_7g092360 23.077 273 185 9 144 395 16 284 5.27e-13 72.0
MS.gene066901.t1 MTR_5g092810 31.373 153 99 4 144 292 92 242 5.29e-13 72.0
MS.gene066901.t1 MTR_5g088350 28.387 155 99 2 142 291 11 158 5.63e-13 71.2
MS.gene066901.t1 MTR_8g095440 30.065 153 101 3 144 292 30 180 6.19e-13 71.6
MS.gene066901.t1 MTR_2g016340 30.667 150 97 3 144 291 12 156 6.64e-13 71.2
MS.gene066901.t1 MTR_8g099095 30.719 153 100 3 144 292 66 216 9.15e-13 70.9
MS.gene066901.t1 MTR_8g093730 29.747 158 107 2 136 291 291 446 9.71e-13 71.2
MS.gene066901.t1 MTR_1g026075 31.373 153 99 3 144 292 74 224 9.88e-13 68.6
MS.gene066901.t1 MTR_5g088350 28.387 155 99 2 142 291 11 158 1.26e-12 69.7
MS.gene066901.t1 MTR_1g052115 26.000 150 109 2 143 291 3 151 1.39e-12 71.2
MS.gene066901.t1 MTR_1g052530 31.169 154 100 3 143 292 51 202 1.59e-12 70.5
MS.gene066901.t1 MTR_5g099240 32.680 153 97 4 144 292 96 246 1.77e-12 70.1
MS.gene066901.t1 MTR_5g099240 32.680 153 97 4 144 292 24 174 1.85e-12 70.1
MS.gene066901.t1 MTR_1g052530 31.169 154 100 3 143 292 51 202 1.93e-12 69.7
MS.gene066901.t1 MTR_5g088350 28.387 155 99 2 142 291 11 158 2.44e-12 69.3
MS.gene066901.t1 MTR_5g075060 26.582 158 111 2 135 291 3 156 2.76e-12 69.3
MS.gene066901.t1 MTR_7g089480 29.268 246 150 9 55 291 64 294 2.87e-12 69.7
MS.gene066901.t1 MTR_7g106710 30.719 153 100 3 144 292 135 285 4.53e-12 68.6
MS.gene066901.t1 MTR_3g092230 33.533 167 100 6 140 298 133 296 4.60e-12 68.9
MS.gene066901.t1 MTR_0464s0040 27.389 157 111 1 135 291 3 156 5.72e-12 65.5
MS.gene066901.t1 MTR_7g106710 30.719 153 100 3 144 292 135 285 5.87e-12 68.6
MS.gene066901.t1 MTR_3g098090 32.026 153 98 4 144 292 32 182 6.75e-12 68.2
MS.gene066901.t1 MTR_4g086660 28.365 208 134 6 91 291 91 290 7.22e-12 68.6
MS.gene066901.t1 MTR_8g098425 33.793 145 90 4 150 291 414 555 7.46e-12 68.6
MS.gene066901.t1 MTR_5g017890 30.137 146 99 2 148 291 376 520 7.94e-12 68.6
MS.gene066901.t1 MTR_5g092815 30.065 153 101 4 144 292 91 241 8.90e-12 67.4
MS.gene066901.t1 MTR_1g054865 31.343 134 89 3 144 276 161 292 1.08e-11 67.8
MS.gene066901.t1 MTR_4g005730 31.126 151 98 4 143 291 23 169 1.11e-11 67.8
MS.gene066901.t1 MTR_2g078740 26.316 152 108 2 144 295 15 162 1.12e-11 67.8
MS.gene066901.t1 MTR_4g005730 31.126 151 98 4 143 291 23 169 1.16e-11 67.8
MS.gene066901.t1 MTR_2g078740 26.316 152 108 2 144 295 15 162 1.18e-11 67.8
MS.gene066901.t1 MTR_7g106710 30.719 153 100 3 144 292 135 285 1.20e-11 67.8
MS.gene066901.t1 MTR_4g005730 31.126 151 98 4 143 291 23 169 1.21e-11 67.8
MS.gene066901.t1 MTR_2g078740 26.316 152 108 2 144 295 15 162 1.21e-11 67.8
MS.gene066901.t1 MTR_2g105010 29.221 154 106 1 138 291 8 158 1.25e-11 67.4
MS.gene066901.t1 MTR_1g055255 28.729 181 101 9 313 487 231 389 1.32e-11 67.4
MS.gene066901.t1 MTR_2g006330 35.455 110 62 3 370 474 79 184 1.40e-11 65.5
MS.gene066901.t1 MTR_8g079790 28.054 221 138 8 87 291 66 281 1.47e-11 67.4
MS.gene066901.t1 MTR_4g094415 29.655 145 95 3 150 291 169 309 1.48e-11 67.4
MS.gene066901.t1 MTR_7g106710 30.719 153 100 3 144 292 135 285 1.50e-11 67.4
MS.gene066901.t1 MTR_1g040875 28.571 175 114 5 141 312 21 187 2.22e-11 66.2
MS.gene066901.t1 MTR_7g116390 37.864 103 57 3 375 474 176 274 2.34e-11 65.1
MS.gene066901.t1 MTR_7g116390 29.054 148 100 3 143 288 15 159 5.15e-11 64.3
MS.gene066901.t1 MTR_4g094415 29.655 145 95 3 150 291 169 309 2.73e-11 65.9
MS.gene066901.t1 MTR_3g097320 36.364 110 61 3 370 474 155 260 2.76e-11 65.5
MS.gene066901.t1 MTR_4g099240 35.514 107 60 3 373 474 159 261 3.08e-11 65.5
MS.gene066901.t1 MTR_2g006330 35.455 110 62 3 370 474 155 260 3.16e-11 65.5
MS.gene066901.t1 MTR_3g095620 29.878 164 104 5 133 291 15 172 4.28e-11 64.3
MS.gene066901.t1 MTR_6g006770 31.169 154 102 3 139 291 11 161 4.88e-11 65.9
MS.gene066901.t1 MTR_7g011800 30.189 159 100 5 144 298 120 271 6.75e-11 65.5
MS.gene066901.t1 MTR_6g012980 29.375 160 107 3 134 291 63 218 7.95e-11 64.7
MS.gene066901.t1 MTR_6g071280 30.061 163 108 4 131 291 43 201 8.11e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066901.t1 AT1G79250 70.601 449 111 7 107 537 110 555 0.0 640
MS.gene066901.t1 AT1G79250 70.601 449 111 7 107 537 110 555 0.0 640
MS.gene066901.t1 AT1G79250 70.601 449 111 7 107 537 110 555 0.0 640
MS.gene066901.t1 AT1G79250 70.601 449 111 7 107 537 110 555 0.0 640
MS.gene066901.t1 AT3G12690 65.890 472 133 7 79 537 121 577 0.0 611
MS.gene066901.t1 AT3G12690 65.890 472 133 7 79 537 121 577 0.0 611
MS.gene066901.t1 AT3G12690 65.890 472 133 7 79 537 121 577 0.0 611
MS.gene066901.t1 AT1G16440 69.393 428 111 9 116 537 86 499 0.0 590
MS.gene066901.t1 AT5G47750 61.772 429 151 7 116 537 164 586 0.0 533
MS.gene066901.t1 AT5G55910 61.949 431 145 7 114 537 80 498 0.0 526
MS.gene066901.t1 AT5G55910 61.949 431 145 7 114 537 80 498 0.0 526
MS.gene066901.t1 AT5G40030 62.238 429 140 9 116 537 86 499 0.0 525
MS.gene066901.t1 AT4G26610 65.985 391 115 6 116 496 96 478 0.0 521
MS.gene066901.t1 AT3G27580 63.990 386 130 5 115 493 152 535 1.20e-175 508
MS.gene066901.t1 AT3G27580 63.990 386 130 5 115 493 152 535 1.20e-175 508
MS.gene066901.t1 AT2G44830 49.545 549 248 11 11 537 224 765 3.84e-171 503
MS.gene066901.t1 AT2G44830 49.545 549 248 11 11 537 224 765 3.84e-171 503
MS.gene066901.t1 AT2G44830 49.545 549 248 11 11 537 224 765 3.84e-171 503
MS.gene066901.t1 AT5G03640 55.949 395 154 7 116 496 512 900 2.58e-150 454
MS.gene066901.t1 AT5G03640 55.949 395 154 7 116 496 512 900 2.58e-150 454
MS.gene066901.t1 AT3G52890 52.980 453 186 9 58 499 465 901 3.42e-146 444
MS.gene066901.t1 AT3G52890 52.980 453 186 9 58 499 465 901 3.42e-146 444
MS.gene066901.t1 AT3G52890 52.980 453 186 9 58 499 465 901 3.42e-146 444
MS.gene066901.t1 AT3G52890 52.980 453 186 9 58 499 465 901 3.42e-146 444
MS.gene066901.t1 AT2G36350 55.784 389 162 5 116 495 532 919 1.19e-145 443
MS.gene066901.t1 AT2G26700 43.725 494 202 10 54 492 11 483 1.65e-128 385
MS.gene066901.t1 AT3G44610 54.017 361 134 7 144 482 71 421 4.57e-122 366
MS.gene066901.t1 AT2G34650 48.718 390 160 8 115 491 49 411 1.55e-119 359
MS.gene066901.t1 AT5G58140 45.455 385 165 6 111 494 544 884 1.65e-107 342
MS.gene066901.t1 AT5G58140 45.455 385 165 6 111 494 544 884 1.65e-107 342
MS.gene066901.t1 AT5G58140 45.455 385 165 6 111 494 544 884 1.65e-107 342
MS.gene066901.t1 AT5G58140 45.455 385 165 6 111 494 544 884 1.65e-107 342
MS.gene066901.t1 AT5G58140 45.455 385 165 6 111 494 544 884 1.65e-107 342
MS.gene066901.t1 AT5G58140 45.889 377 159 6 111 486 544 876 8.06e-106 337
MS.gene066901.t1 AT3G14370 43.700 373 185 5 118 488 61 410 2.97e-100 311
MS.gene066901.t1 AT3G45780 44.063 379 170 4 116 494 636 972 1.72e-96 315
MS.gene066901.t1 AT3G45780 44.063 379 170 4 116 494 636 972 1.72e-96 315
MS.gene066901.t1 AT1G53700 44.297 377 180 7 118 490 66 416 1.78e-94 296
MS.gene066901.t1 AT1G51170 37.302 378 182 10 136 491 14 358 1.73e-71 234
MS.gene066901.t1 AT4G13000 35.813 363 196 9 139 496 15 345 3.55e-67 222
MS.gene066901.t1 AT3G20830 37.602 367 192 10 139 491 16 359 1.31e-66 221
MS.gene066901.t1 AT3G25250 34.417 369 207 8 136 495 9 351 5.65e-66 220
MS.gene066901.t1 AT1G45160 33.598 378 201 7 139 512 665 996 1.64e-54 199
MS.gene066901.t1 AT1G45160 33.598 378 201 7 139 512 665 996 2.51e-54 198
MS.gene066901.t1 AT1G48490 31.522 368 200 8 139 502 824 1143 5.13e-52 191
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MS.gene066901.t1 AT3G01090 24.474 380 207 9 143 521 18 318 6.20e-24 105
MS.gene066901.t1 AT3G01090 24.474 380 207 9 143 521 41 341 6.61e-24 105
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MS.gene066901.t1 AT3G29160 23.907 389 213 10 143 530 19 325 3.65e-22 100
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MS.gene066901.t1 AT2G25880 24.561 342 174 8 133 474 32 289 1.72e-20 92.4
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MS.gene066901.t1 AT2G20050 38.261 115 67 2 370 482 931 1043 1.75e-17 86.7
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MS.gene066901.t1 AT3G04810 30.667 150 102 2 143 291 3 151 9.63e-17 84.0
MS.gene066901.t1 AT3G04810 30.667 150 102 2 143 291 3 151 9.63e-17 84.0
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MS.gene066901.t1 AT5G28290 29.333 150 104 2 143 291 3 151 1.47e-15 80.1
MS.gene066901.t1 AT5G28290 29.333 150 104 2 143 291 3 151 1.53e-15 80.1
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MS.gene066901.t1 AT3G20410 32.680 153 97 3 144 292 91 241 1.70e-15 79.7
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MS.gene066901.t1 AT3G10660 34.810 158 96 6 140 292 181 336 3.05e-15 79.3
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MS.gene066901.t1 AT4G04720 32.026 153 98 3 144 292 80 230 3.45e-15 79.0
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MS.gene066901.t1 AT1G54510 29.333 150 104 2 143 291 3 151 3.65e-15 79.0
MS.gene066901.t1 AT1G54510 29.333 150 104 2 143 291 3 151 3.65e-15 79.0
MS.gene066901.t1 AT1G54510 29.333 150 104 2 143 291 3 151 3.65e-15 79.0
MS.gene066901.t1 AT1G54510 29.333 150 104 2 143 291 3 151 3.65e-15 79.0
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MS.gene066901.t1 AT5G10930 31.579 152 100 2 141 291 9 157 3.96e-15 78.2
MS.gene066901.t1 AT3G44200 28.571 154 104 3 141 291 5 155 5.06e-15 79.0
MS.gene066901.t1 AT3G44200 28.571 154 104 3 141 291 5 155 5.06e-15 79.0
MS.gene066901.t1 AT1G30270 31.579 152 98 4 142 291 29 176 5.10e-15 78.2
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MS.gene066901.t1 AT3G61960 25.915 328 161 13 142 462 8 260 9.14e-15 77.4
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MS.gene066901.t1 AT2G34180 29.012 162 108 3 133 292 46 202 2.29e-14 76.3
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MS.gene066901.t1 AT4G19110 27.679 336 186 14 143 475 3 284 3.91e-14 75.1
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MS.gene066901.t1 AT2G26980 26.087 161 117 1 131 291 1 159 5.07e-14 74.7
MS.gene066901.t1 AT2G26980 26.087 161 117 1 131 291 11 169 5.18e-14 74.7
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MS.gene066901.t1 AT1G50240 28.750 160 110 3 144 303 6 161 1.46e-12 71.2
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MS.gene066901.t1 AT1G50240 28.750 160 110 3 144 303 6 161 1.46e-12 71.2
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MS.gene066901.t1 AT4G24100 30.519 154 105 1 138 291 27 178 6.52e-14 75.1
MS.gene066901.t1 AT4G24100 30.519 154 105 1 138 291 43 194 6.80e-14 75.1
MS.gene066901.t1 AT3G63280 28.188 149 105 2 144 291 4 151 6.82e-14 74.7
MS.gene066901.t1 AT3G63280 28.188 149 105 2 144 291 4 151 6.82e-14 74.7
MS.gene066901.t1 AT3G63280 28.188 149 105 2 144 291 4 151 6.82e-14 74.7
MS.gene066901.t1 AT2G25090 29.878 164 110 3 130 291 1 161 7.21e-14 74.3
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MS.gene066901.t1 AT5G01810 30.405 148 100 1 144 291 12 156 1.35e-13 72.8
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MS.gene066901.t1 AT5G01810 30.405 148 100 1 144 291 12 156 1.39e-13 73.2
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MS.gene066901.t1 AT2G35890 30.380 158 106 3 143 298 131 286 1.71e-13 73.6
MS.gene066901.t1 AT4G14480 31.613 155 101 3 139 291 10 161 1.76e-13 73.2
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MS.gene066901.t1 AT4G35310 32.026 153 98 4 144 292 97 247 2.69e-13 72.8
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MS.gene066901.t1 AT3G57530 31.373 153 99 3 144 292 63 213 1.95e-12 70.1
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MS.gene066901.t1 AT1G53165 25.000 160 113 3 136 295 10 162 3.68e-12 69.7
MS.gene066901.t1 AT1G53165 25.000 160 113 3 136 295 10 162 3.69e-12 69.3
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MS.gene066901.t1 AT4G04740 32.117 137 87 3 159 291 84 218 4.62e-11 65.9
MS.gene066901.t1 AT4G04740 32.117 137 87 3 159 291 84 218 4.62e-11 65.9
MS.gene066901.t1 AT4G04740 32.117 137 87 3 159 291 84 218 4.62e-11 65.9
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MS.gene066901.t1 AT4G26890 32.168 143 85 4 150 288 11 145 8.73e-11 64.7
MS.gene066901.t1 AT3G21220 28.395 162 106 3 131 291 57 209 9.58e-11 63.9
MS.gene066901.t1 AT3G21220 28.395 162 106 3 131 291 57 209 9.58e-11 63.9

Find 112 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCACCACGCACAATTTC+TGG 0.112048 8.4:-54717799 None:intergenic
ATGTTGTAGGACAGCCTTTA+AGG 0.194011 8.4:+54717926 MS.gene066901:CDS
TGCACAACTTTGATCTGTTT+TGG 0.208607 8.4:-54716498 None:intergenic
TACGGAACAACACCGTTTAA+AGG 0.213886 8.4:+54717877 MS.gene066901:CDS
GTGTATCTTGTTGAACTTAA+AGG 0.215757 8.4:+54716899 MS.gene066901:CDS
ATTCTATGCTATGAAATTAA+TGG 0.223149 8.4:+54716931 MS.gene066901:CDS
GTTGGTTCTGCCATTAATTC+TGG 0.251158 8.4:-54717730 None:intergenic
CCACTCCTTGAAATCATTCT+TGG 0.275035 8.4:-54716701 None:intergenic
TCAAACGGTTCAGGTATAAT+TGG 0.286411 8.4:-54718114 None:intergenic
GCTGTTGATTGGTGGACATT+TGG 0.327566 8.4:+54717832 MS.gene066901:CDS
ATCATTCTTGGACTTGGTCT+TGG 0.329072 8.4:-54716689 None:intergenic
GGATGGTCAGGAAACCTTAA+AGG 0.333553 8.4:-54717940 None:intergenic
CTTGAAATCATTCTTGGACT+TGG 0.351669 8.4:-54716695 None:intergenic
CTTGGGAAGAAGAAACTTGA+TGG 0.353024 8.4:-54717640 None:intergenic
TGTATCTTGTTGAACTTAAA+GGG 0.367339 8.4:+54716900 MS.gene066901:CDS
CTGTTGATTGGTGGACATTT+GGG 0.384043 8.4:+54717833 MS.gene066901:CDS
AGACTACCGCTACGTGAATT+CGG 0.385355 8.4:-54716725 None:intergenic
CGAAAATCAAAATCAGATTT+CGG 0.387635 8.4:+54717685 MS.gene066901:CDS
TGGCCGTCTTCCAGAATTAA+TGG 0.388498 8.4:+54717720 MS.gene066901:CDS
GATGAGTAACAACGGCTTAC+CGG 0.394111 8.4:+54716466 MS.gene066901:intron
TGCTATGAAATTAATGGATA+AGG 0.395657 8.4:+54716937 MS.gene066901:CDS
TCTTGGAGTTGTGGAAAATT+CGG 0.398143 8.4:-54716672 None:intergenic
GAATACAAAGTTGGCAAGAA+AGG 0.399164 8.4:-54717031 None:intergenic
ATGGAATACCTCCACATGTT+AGG 0.404335 8.4:+54717421 MS.gene066901:CDS
ATGCTTACATGAGGTGAATC+AGG 0.407102 8.4:-54716286 None:intergenic
TTATAAGCAATTCTCTTATG+AGG 0.411418 8.4:-54718015 None:intergenic
AAATGAGAAGTATTATTGTT+TGG 0.413008 8.4:+54717063 MS.gene066901:CDS
CCTGTATGAGGCTTAAATAT+TGG 0.414373 8.4:-54716764 None:intergenic
TCAAAATAAGAATACAAAGT+TGG 0.417105 8.4:-54717040 None:intergenic
GTAGCTAGGGATCTTATTAG+AGG 0.417741 8.4:+54717976 MS.gene066901:CDS
TCAAGTTCAAATCTTAACTT+TGG 0.419954 8.4:+54716830 MS.gene066901:CDS
GAGGAGGATTTGACGAGGGT+GGG 0.428745 8.4:-54717544 None:intergenic
GACATTGATCGGACGTTAGT+TGG 0.433025 8.4:-54717748 None:intergenic
TCCAATGGATGTGGTGGTGC+TGG 0.433860 8.4:-54717578 None:intergenic
CGGTTTCCATTACCTTTAAA+CGG 0.434303 8.4:-54717889 None:intergenic
TGACTAAAATCAAACGGTTC+AGG 0.435572 8.4:-54718123 None:intergenic
AACAATCAAGAAGCAATAGA+TGG 0.436045 8.4:+54716557 MS.gene066901:CDS
CACCACATCCATTGGAATCC+TGG 0.436045 8.4:+54717585 MS.gene066901:CDS
TGGACTTGGTCTTGGAGTTG+TGG 0.437521 8.4:-54716681 None:intergenic
GTACTGCATGTTCGTCGTCC+AGG 0.438247 8.4:-54717603 None:intergenic
CATACTGAAAGGGAGATTCT+TGG 0.440303 8.4:+54716995 MS.gene066901:CDS
CTTCTGCGAGTCCGGTAGCT+AGG 0.444960 8.4:+54717962 MS.gene066901:CDS
CAAGTCCAAGAATGATTTCA+AGG 0.454121 8.4:+54716696 MS.gene066901:CDS
ACAACACCGTTTAAAGGTAA+TGG 0.454704 8.4:+54717883 MS.gene066901:CDS
AAGAGAATTGCTTATAAAAG+AGG 0.460267 8.4:+54718021 MS.gene066901:CDS
TGTTAGTAAGGAAACTGTTA+TGG 0.461714 8.4:+54718149 MS.gene066901:CDS
CTCACATCACCTCCTGTATG+AGG 0.467680 8.4:-54716776 None:intergenic
GAAGTATTATTGTTTGGTCA+TGG 0.469174 8.4:+54717069 MS.gene066901:CDS
TGACCATCCTTCTGCGAGTC+CGG 0.475308 8.4:+54717954 MS.gene066901:CDS
TCCGATCAATGTCATTCGTT+GGG 0.477625 8.4:+54717758 MS.gene066901:CDS
TTCAGAGATTCTATTAGCAA+TGG 0.477706 8.4:+54717402 MS.gene066901:CDS
TGTGGCCTTGGTGATGATGT+TGG 0.482333 8.4:-54716620 None:intergenic
TGTGGCCATTGTCTCGGACT+AGG 0.488886 8.4:-54717477 None:intergenic
ACCAGCACCACCACATCCAT+TGG 0.494567 8.4:+54717577 MS.gene066901:CDS
CGTGTTGGTTACGGTGACAT+TGG 0.496051 8.4:+54716872 MS.gene066901:CDS
AATACAAAGTTGGCAAGAAA+GGG 0.496110 8.4:-54717030 None:intergenic
GCTGGTTATGTGTGCGGAGG+AGG 0.497030 8.4:-54717560 None:intergenic
CTTGTTGAACTTAAAGGGAC+AGG 0.499514 8.4:+54716905 MS.gene066901:CDS
CCAATATTTAAGCCTCATAC+AGG 0.502864 8.4:+54716764 MS.gene066901:CDS
TGTTGGGTTGCTTCATTCTG+AGG 0.506123 8.4:-54717120 None:intergenic
GTCCGATCAATGTCATTCGT+TGG 0.506631 8.4:+54717757 MS.gene066901:CDS
AGGAGGATTTGACGAGGGTG+GGG 0.506798 8.4:-54717543 None:intergenic
GGAGGAGGATTTGACGAGGG+TGG 0.519155 8.4:-54717545 None:intergenic
TTTCGGCTTGTGAAGCGTGT+TGG 0.519435 8.4:+54716857 MS.gene066901:CDS
GGACTCGCAGAAGGATGGTC+AGG 0.521180 8.4:-54717952 None:intergenic
TTCTGCGAGTCCGGTAGCTA+GGG 0.524770 8.4:+54717963 MS.gene066901:CDS
ACATACTGACTAAAATCAAA+CGG 0.525447 8.4:-54718129 None:intergenic
CTTGTGAAGCGTGTTGGTTA+CGG 0.527758 8.4:+54716863 MS.gene066901:CDS
TTCTTAGAGCACATACTGAA+AGG 0.529112 8.4:+54716984 MS.gene066901:CDS
ATACAGGAGGTGATGTGAGA+TGG 0.529546 8.4:+54716780 MS.gene066901:CDS
AAAATCAGATTTCGGTCTCA+TGG 0.532025 8.4:+54717693 MS.gene066901:CDS
TCCCAACGAATGACATTGAT+CGG 0.538128 8.4:-54717759 None:intergenic
TCTTAGAGCACATACTGAAA+GGG 0.539921 8.4:+54716985 MS.gene066901:CDS
GCATTATGTGGCCATTGTCT+CGG 0.542930 8.4:-54717483 None:intergenic
GACACGGTAGTGCTGTTGAT+TGG 0.543609 8.4:+54717821 MS.gene066901:CDS
CCAGAAATTGTGCGTGGTGA+AGG 0.544337 8.4:+54717799 MS.gene066901:CDS
AACGGTTCAGGTATAATTGG+AGG 0.554973 8.4:-54718111 None:intergenic
GTCCAGGATTCCAATGGATG+TGG 0.555162 8.4:-54717587 None:intergenic
CTAATAAGATCCCTAGCTAC+CGG 0.565436 8.4:-54717973 None:intergenic
TACAGGAGGTGATGTGAGAT+GGG 0.576866 8.4:+54716781 MS.gene066901:CDS
CAAAATCTGATAGCATTATG+TGG 0.579242 8.4:-54717495 None:intergenic
CTAGCTACCGGACTCGCAGA+AGG 0.587354 8.4:-54717961 None:intergenic
CTACCGGACTCGCAGAAGGA+TGG 0.592253 8.4:-54717957 None:intergenic
GACGACGAACATGCAGTACA+AGG 0.593811 8.4:+54717607 MS.gene066901:CDS
CTGCCATTAATTCTGGAAGA+CGG 0.601457 8.4:-54717723 None:intergenic
TAGCTAGGGATCTTATTAGA+GGG 0.602530 8.4:+54717977 MS.gene066901:CDS
TTCGTCGTCCAGGATTCCAA+TGG 0.604326 8.4:-54717593 None:intergenic
TCAGATTTCGGTCTCATGGT+AGG 0.604590 8.4:+54717697 MS.gene066901:CDS
TGTATACTATTCCTAACATG+TGG 0.609058 8.4:-54717432 None:intergenic
AACGTCCTAGTCCGAGACAA+TGG 0.610314 8.4:+54717472 MS.gene066901:CDS
ACGGTAGTGCTGTTGATTGG+TGG 0.616072 8.4:+54717824 MS.gene066901:CDS
GCAATCAACATGGTTTCAAG+AGG 0.616553 8.4:+54716806 MS.gene066901:CDS
CCAAGAATGATTTCAAGGAG+TGG 0.625449 8.4:+54716701 MS.gene066901:CDS
TGGGGCTGACAGAACAACGG+AGG 0.630984 8.4:-54717525 None:intergenic
CAGGATTCCAATGGATGTGG+TGG 0.649931 8.4:-54717584 None:intergenic
GATTTCGGTCTCATGGTAGG+TGG 0.652081 8.4:+54717700 MS.gene066901:CDS
GGGTGGGGCTGACAGAACAA+CGG 0.659786 8.4:-54717528 None:intergenic
GGTGCTGGTTATGTGTGCGG+AGG 0.661993 8.4:-54717563 None:intergenic
ATACTATTCCTAACATGTGG+AGG 0.662634 8.4:-54717429 None:intergenic
CAATCAACATGGTTTCAAGA+GGG 0.669312 8.4:+54716807 MS.gene066901:CDS
ATTTCACTGAAAATGCTGCA+AGG 0.671987 8.4:+54717146 MS.gene066901:CDS
TGCGGAGGAGGATTTGACGA+GGG 0.679374 8.4:-54717548 None:intergenic
TAAATGCAGATGAGTAACAA+CGG 0.680574 8.4:+54716458 MS.gene066901:intron
ATATTTAAGCCTCATACAGG+AGG 0.684413 8.4:+54716767 MS.gene066901:CDS
GGGGCTGACAGAACAACGGA+GGG 0.685170 8.4:-54717524 None:intergenic
GGTGGTGCTGGTTATGTGTG+CGG 0.693424 8.4:-54717566 None:intergenic
ATTGTGCGTGGTGAAGGACA+CGG 0.703062 8.4:+54717805 MS.gene066901:CDS
CTTGCTCCAGAAATTGTGCG+TGG 0.726085 8.4:+54717793 MS.gene066901:CDS
GTGCGGAGGAGGATTTGACG+AGG 0.747192 8.4:-54717549 None:intergenic
ATAAACCAACATCATCACCA+AGG 0.751474 8.4:+54716615 MS.gene066901:CDS
GAGATGGGATGCAATCAACA+TGG 0.757080 8.4:+54716796 MS.gene066901:CDS
AGTGGACCGAATTCACGTAG+CGG 0.777929 8.4:+54716719 MS.gene066901:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATTATATAAAAAACAAAA+TGG + chr8.4:54717289-54717308 MS.gene066901:intron 10.0%
!!! AATTTCTAAAACAAATAATT+TGG + chr8.4:54716322-54716341 MS.gene066901:intron 10.0%
!! TTATAGAACAGTATTATATT+AGG - chr8.4:54716363-54716382 None:intergenic 15.0%
!!! TATATTAGGCTTTAATTATT+AGG - chr8.4:54716349-54716368 None:intergenic 15.0%
!! ATTCTATGCTATGAAATTAA+TGG + chr8.4:54716931-54716950 MS.gene066901:CDS 20.0%
!! TCAAAATAAGAATACAAAGT+TGG - chr8.4:54717043-54717062 None:intergenic 20.0%
!! TTAGTAATGTGTAAAATAGA+AGG - chr8.4:54716437-54716456 None:intergenic 20.0%
!!! AAATGAGAAGTATTATTGTT+TGG + chr8.4:54717063-54717082 MS.gene066901:CDS 20.0%
!!! TTTTTATACGAGCTTTTATA+CGG + chr8.4:54717859-54717878 MS.gene066901:CDS 20.0%
! AAGAGAATTGCTTATAAAAG+AGG + chr8.4:54718021-54718040 MS.gene066901:CDS 25.0%
! CGAAAATCAAAATCAGATTT+CGG + chr8.4:54717685-54717704 MS.gene066901:CDS 25.0%
! TCAAGTTCAAATCTTAACTT+TGG + chr8.4:54716830-54716849 MS.gene066901:CDS 25.0%
! TGTATCTTGTTGAACTTAAA+GGG + chr8.4:54716900-54716919 MS.gene066901:CDS 25.0%
! TTATAAGCAATTCTCTTATG+AGG - chr8.4:54718018-54718037 None:intergenic 25.0%
!! ACATACTGACTAAAATCAAA+CGG - chr8.4:54718132-54718151 None:intergenic 25.0%
!! ATAAGTGATTCTAACTTTTG+TGG - chr8.4:54716641-54716660 None:intergenic 25.0%
!! TGCTATGAAATTAATGGATA+AGG + chr8.4:54716937-54716956 MS.gene066901:CDS 25.0%
!! TTTTAGTCAGTATGTTAGTA+AGG + chr8.4:54718137-54718156 MS.gene066901:CDS 25.0%
!!! ATCTTAACTTTGGTCATTTT+CGG + chr8.4:54716840-54716859 MS.gene066901:CDS 25.0%
!!! ATTTTTCGAAGGTGTTAATT+GGG + chr8.4:54718068-54718087 MS.gene066901:CDS 25.0%
!!! CGAAATCTGATTTTGATTTT+CGG - chr8.4:54717687-54717706 None:intergenic 25.0%
!!! TTCTACTTTGATTTGACAAT+TGG - chr8.4:54717251-54717270 None:intergenic 25.0%
!!! TTTTGATTTTCGGTTTCTTT+TGG - chr8.4:54717677-54717696 None:intergenic 25.0%
AACAATCAAGAAGCAATAGA+TGG + chr8.4:54716557-54716576 MS.gene066901:CDS 30.0%
AATACAAAGTTGGCAAGAAA+GGG - chr8.4:54717033-54717052 None:intergenic 30.0%
CAAAATCTGATAGCATTATG+TGG - chr8.4:54717498-54717517 None:intergenic 30.0%
CAATTAACACCTTCGAAAAA+TGG - chr8.4:54718069-54718088 None:intergenic 30.0%
GTGTATCTTGTTGAACTTAA+AGG + chr8.4:54716899-54716918 MS.gene066901:CDS 30.0%
TAAATGCAGATGAGTAACAA+CGG + chr8.4:54716458-54716477 MS.gene066901:intron 30.0%
TGTATACTATTCCTAACATG+TGG - chr8.4:54717435-54717454 None:intergenic 30.0%
TGTTAGTAAGGAAACTGTTA+TGG + chr8.4:54718149-54718168 MS.gene066901:CDS 30.0%
TTCAGAGATTCTATTAGCAA+TGG + chr8.4:54717402-54717421 MS.gene066901:CDS 30.0%
! ATGAAATTTTTGTGTCATGC+AGG + chr8.4:54717371-54717390 MS.gene066901:intron 30.0%
! ATTTTCAGTGAAATGCTTGT+TGG - chr8.4:54717140-54717159 None:intergenic 30.0%
! ATTTTCGGTTTCTTTTGGAT+GGG - chr8.4:54717672-54717691 None:intergenic 30.0%
! GAAGTATTATTGTTTGGTCA+TGG + chr8.4:54717069-54717088 MS.gene066901:CDS 30.0%
! TTTTCAGTGAAATGCTTGTT+GGG - chr8.4:54717139-54717158 None:intergenic 30.0%
!! AAACAACATCCATTTTTCGA+AGG + chr8.4:54718057-54718076 MS.gene066901:CDS 30.0%
!! GCTACACTTTTTAATGTTGT+AGG + chr8.4:54717913-54717932 MS.gene066901:CDS 30.0%
!! TCACTTTTCTTTCAGTTCAA+TGG + chr8.4:54717173-54717192 MS.gene066901:intron 30.0%
!!! CATTTTTCGAAGGTGTTAAT+TGG + chr8.4:54718067-54718086 MS.gene066901:CDS 30.0%
AAAATCAGATTTCGGTCTCA+TGG + chr8.4:54717693-54717712 MS.gene066901:CDS 35.0%
AAACGAACTTCAGTTAGTAG+AGG + chr8.4:54717202-54717221 MS.gene066901:intron 35.0%
ACAACACCGTTTAAAGGTAA+TGG + chr8.4:54717883-54717902 MS.gene066901:CDS 35.0%
ATAAACCAACATCATCACCA+AGG + chr8.4:54716615-54716634 MS.gene066901:CDS 35.0%
ATACTATTCCTAACATGTGG+AGG - chr8.4:54717432-54717451 None:intergenic 35.0%
ATATTTAAGCCTCATACAGG+AGG + chr8.4:54716767-54716786 MS.gene066901:CDS 35.0%
ATTTCACTGAAAATGCTGCA+AGG + chr8.4:54717146-54717165 MS.gene066901:CDS 35.0%
CAAGTCCAAGAATGATTTCA+AGG + chr8.4:54716696-54716715 MS.gene066901:CDS 35.0%
CAATCAACATGGTTTCAAGA+GGG + chr8.4:54716807-54716826 MS.gene066901:CDS 35.0%
CCAATATTTAAGCCTCATAC+AGG + chr8.4:54716764-54716783 MS.gene066901:CDS 35.0%
CCTGTATGAGGCTTAAATAT+TGG - chr8.4:54716767-54716786 None:intergenic 35.0%
CGGTTTCCATTACCTTTAAA+CGG - chr8.4:54717892-54717911 None:intergenic 35.0%
CTTGAAATCATTCTTGGACT+TGG - chr8.4:54716698-54716717 None:intergenic 35.0%
GAATACAAAGTTGGCAAGAA+AGG - chr8.4:54717034-54717053 None:intergenic 35.0%
TAGCTAGGGATCTTATTAGA+GGG + chr8.4:54717977-54717996 MS.gene066901:CDS 35.0%
TCAAACGGTTCAGGTATAAT+TGG - chr8.4:54718117-54718136 None:intergenic 35.0%
TCTTAGAGCACATACTGAAA+GGG + chr8.4:54716985-54717004 MS.gene066901:CDS 35.0%
TCTTGGAGTTGTGGAAAATT+CGG - chr8.4:54716675-54716694 None:intergenic 35.0%
TGACATGAAATGCTTACATG+AGG - chr8.4:54716298-54716317 None:intergenic 35.0%
TGACTAAAATCAAACGGTTC+AGG - chr8.4:54718126-54718145 None:intergenic 35.0%
TTCTTAGAGCACATACTGAA+AGG + chr8.4:54716984-54717003 MS.gene066901:CDS 35.0%
! CAACATTAAAAAGTGTAGCG+CGG - chr8.4:54717912-54717931 None:intergenic 35.0%
! GATTTTCGGTTTCTTTTGGA+TGG - chr8.4:54717673-54717692 None:intergenic 35.0%
! GCACAACTTTGATCTGTTTT+GGG - chr8.4:54716500-54716519 None:intergenic 35.0%
! TGCACAACTTTGATCTGTTT+TGG - chr8.4:54716501-54716520 None:intergenic 35.0%
AACGGTTCAGGTATAATTGG+AGG - chr8.4:54718114-54718133 None:intergenic 40.0%
ATGCTTACATGAGGTGAATC+AGG - chr8.4:54716289-54716308 None:intergenic 40.0%
ATGGAATACCTCCACATGTT+AGG + chr8.4:54717421-54717440 MS.gene066901:CDS 40.0%
ATGTTGTAGGACAGCCTTTA+AGG + chr8.4:54717926-54717945 MS.gene066901:CDS 40.0%
CATACTGAAAGGGAGATTCT+TGG + chr8.4:54716995-54717014 MS.gene066901:CDS 40.0%
CCAAGAATGATTTCAAGGAG+TGG + chr8.4:54716701-54716720 MS.gene066901:CDS 40.0%
CCACTCCTTGAAATCATTCT+TGG - chr8.4:54716704-54716723 None:intergenic 40.0%
CTAATAAGATCCCTAGCTAC+CGG - chr8.4:54717976-54717995 None:intergenic 40.0%
CTTGGGAAGAAGAAACTTGA+TGG - chr8.4:54717643-54717662 None:intergenic 40.0%
CTTGTTGAACTTAAAGGGAC+AGG + chr8.4:54716905-54716924 MS.gene066901:CDS 40.0%
GCAATCAACATGGTTTCAAG+AGG + chr8.4:54716806-54716825 MS.gene066901:CDS 40.0%
GTAGCTAGGGATCTTATTAG+AGG + chr8.4:54717976-54717995 MS.gene066901:CDS 40.0%
TACGGAACAACACCGTTTAA+AGG + chr8.4:54717877-54717896 MS.gene066901:CDS 40.0%
TCCCAACGAATGACATTGAT+CGG - chr8.4:54717762-54717781 None:intergenic 40.0%
TCCGATCAATGTCATTCGTT+GGG + chr8.4:54717758-54717777 MS.gene066901:CDS 40.0%
! ATCATTCTTGGACTTGGTCT+TGG - chr8.4:54716692-54716711 None:intergenic 40.0%
! CTGCCATTAATTCTGGAAGA+CGG - chr8.4:54717726-54717745 None:intergenic 40.0%
! CTGTTGATTGGTGGACATTT+GGG + chr8.4:54717833-54717852 MS.gene066901:CDS 40.0%
! GATTCTAACTTTTGTGGCCT+TGG - chr8.4:54716635-54716654 None:intergenic 40.0%
! TTTTGGATGGGAGGATTCTT+GGG - chr8.4:54717660-54717679 None:intergenic 40.0%
!! AGGCATTTTGATAGGCTTTG+AGG - chr8.4:54716269-54716288 None:intergenic 40.0%
!! GGTGAATCAGGCATTTTGAT+AGG - chr8.4:54716277-54716296 None:intergenic 40.0%
!! GTCATGGAGTTTTGTAGTTG+TGG + chr8.4:54717085-54717104 MS.gene066901:CDS 40.0%
!! GTTGGTTCTGCCATTAATTC+TGG - chr8.4:54717733-54717752 None:intergenic 40.0%
AGACTACCGCTACGTGAATT+CGG - chr8.4:54716728-54716747 None:intergenic 45.0%
ATACAGGAGGTGATGTGAGA+TGG + chr8.4:54716780-54716799 MS.gene066901:CDS 45.0%
GACATTGATCGGACGTTAGT+TGG - chr8.4:54717751-54717770 None:intergenic 45.0%
GAGATGGGATGCAATCAACA+TGG + chr8.4:54716796-54716815 MS.gene066901:CDS 45.0%
GATGAGTAACAACGGCTTAC+CGG + chr8.4:54716466-54716485 MS.gene066901:intron 45.0%
GCATTATGTGGCCATTGTCT+CGG - chr8.4:54717486-54717505 None:intergenic 45.0%
GGATGGTCAGGAAACCTTAA+AGG - chr8.4:54717943-54717962 None:intergenic 45.0%
GTCCGATCAATGTCATTCGT+TGG + chr8.4:54717757-54717776 MS.gene066901:CDS 45.0%
TACAGGAGGTGATGTGAGAT+GGG + chr8.4:54716781-54716800 MS.gene066901:CDS 45.0%
TCAGATTTCGGTCTCATGGT+AGG + chr8.4:54717697-54717716 MS.gene066901:CDS 45.0%
TGGCCGTCTTCCAGAATTAA+TGG + chr8.4:54717720-54717739 MS.gene066901:CDS 45.0%
! CTTTTGGATGGGAGGATTCT+TGG - chr8.4:54717661-54717680 None:intergenic 45.0%
! GCTGTTGATTGGTGGACATT+TGG + chr8.4:54717832-54717851 MS.gene066901:CDS 45.0%
! TGTTGGGTTGCTTCATTCTG+AGG - chr8.4:54717123-54717142 None:intergenic 45.0%
! TTCGGTTTCTTTTGGATGGG+AGG - chr8.4:54717669-54717688 None:intergenic 45.0%
!! CTTGTGAAGCGTGTTGGTTA+CGG + chr8.4:54716863-54716882 MS.gene066901:CDS 45.0%
!!! TCTGTTTTGGGAGCTTCTTC+CGG - chr8.4:54716488-54716507 None:intergenic 45.0%
!!! AATTAATTATTTATGATTTT+AGG + chr8.4:54716389-54716408 MS.gene066901:intron 5.0%
AACGTCCTAGTCCGAGACAA+TGG + chr8.4:54717472-54717491 MS.gene066901:CDS 50.0%
AGTGGACCGAATTCACGTAG+CGG + chr8.4:54716719-54716738 MS.gene066901:CDS 50.0%
ATTGTGCGTGGTGAAGGACA+CGG + chr8.4:54717805-54717824 MS.gene066901:CDS 50.0%
CACCACATCCATTGGAATCC+TGG + chr8.4:54717585-54717604 MS.gene066901:CDS 50.0%
CAGGATTCCAATGGATGTGG+TGG - chr8.4:54717587-54717606 None:intergenic 50.0%
CCAGAAATTGTGCGTGGTGA+AGG + chr8.4:54717799-54717818 MS.gene066901:CDS 50.0%
CCTTCACCACGCACAATTTC+TGG - chr8.4:54717802-54717821 None:intergenic 50.0%
CTCACATCACCTCCTGTATG+AGG - chr8.4:54716779-54716798 None:intergenic 50.0%
CTTGCTCCAGAAATTGTGCG+TGG + chr8.4:54717793-54717812 MS.gene066901:CDS 50.0%
GACGACGAACATGCAGTACA+AGG + chr8.4:54717607-54717626 MS.gene066901:CDS 50.0%
GATTTCGGTCTCATGGTAGG+TGG + chr8.4:54717700-54717719 MS.gene066901:CDS 50.0%
GTCCAGGATTCCAATGGATG+TGG - chr8.4:54717590-54717609 None:intergenic 50.0%
TTCGTCGTCCAGGATTCCAA+TGG - chr8.4:54717596-54717615 None:intergenic 50.0%
! ACGGTAGTGCTGTTGATTGG+TGG + chr8.4:54717824-54717843 MS.gene066901:CDS 50.0%
! GACACGGTAGTGCTGTTGAT+TGG + chr8.4:54717821-54717840 MS.gene066901:CDS 50.0%
! TTTCGGCTTGTGAAGCGTGT+TGG + chr8.4:54716857-54716876 MS.gene066901:CDS 50.0%
!! CGTGTTGGTTACGGTGACAT+TGG + chr8.4:54716872-54716891 MS.gene066901:CDS 50.0%
!! TCTCGGACTAGGACGTTTTC+TGG - chr8.4:54717469-54717488 None:intergenic 50.0%
!! TGGACTTGGTCTTGGAGTTG+TGG - chr8.4:54716684-54716703 None:intergenic 50.0%
!! TGTGGCCTTGGTGATGATGT+TGG - chr8.4:54716623-54716642 None:intergenic 50.0%
ACCAGCACCACCACATCCAT+TGG + chr8.4:54717577-54717596 MS.gene066901:CDS 55.0%
AGGAGGATTTGACGAGGGTG+GGG - chr8.4:54717546-54717565 None:intergenic 55.0%
GAGGAGGATTTGACGAGGGT+GGG - chr8.4:54717547-54717566 None:intergenic 55.0%
GTACTGCATGTTCGTCGTCC+AGG - chr8.4:54717606-54717625 None:intergenic 55.0%
TGACCATCCTTCTGCGAGTC+CGG + chr8.4:54717954-54717973 MS.gene066901:CDS 55.0%
TGCGGAGGAGGATTTGACGA+GGG - chr8.4:54717551-54717570 None:intergenic 55.0%
TGTGGCCATTGTCTCGGACT+AGG - chr8.4:54717480-54717499 None:intergenic 55.0%
TTCTGCGAGTCCGGTAGCTA+GGG + chr8.4:54717963-54717982 MS.gene066901:CDS 55.0%
! TCCAATGGATGTGGTGGTGC+TGG - chr8.4:54717581-54717600 None:intergenic 55.0%
!! GGTGGTGCTGGTTATGTGTG+CGG - chr8.4:54717569-54717588 None:intergenic 55.0%
CTACCGGACTCGCAGAAGGA+TGG - chr8.4:54717960-54717979 None:intergenic 60.0%
CTAGCTACCGGACTCGCAGA+AGG - chr8.4:54717964-54717983 None:intergenic 60.0%
CTTCTGCGAGTCCGGTAGCT+AGG + chr8.4:54717962-54717981 MS.gene066901:CDS 60.0%
GCTGGTTATGTGTGCGGAGG+AGG - chr8.4:54717563-54717582 None:intergenic 60.0%
GGACTCGCAGAAGGATGGTC+AGG - chr8.4:54717955-54717974 None:intergenic 60.0%
GGAGGAGGATTTGACGAGGG+TGG - chr8.4:54717548-54717567 None:intergenic 60.0%
GGGGCTGACAGAACAACGGA+GGG - chr8.4:54717527-54717546 None:intergenic 60.0%
GGGTGGGGCTGACAGAACAA+CGG - chr8.4:54717531-54717550 None:intergenic 60.0%
GTGCGGAGGAGGATTTGACG+AGG - chr8.4:54717552-54717571 None:intergenic 60.0%
TGGGGCTGACAGAACAACGG+AGG - chr8.4:54717528-54717547 None:intergenic 60.0%
!! GGTGCTGGTTATGTGTGCGG+AGG - chr8.4:54717566-54717585 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 54716262 54718266 54716262 ID=MS.gene066901
chr8.4 mRNA 54716262 54718266 54716262 ID=MS.gene066901.t1;Parent=MS.gene066901
chr8.4 exon 54716262 54716300 54716262 ID=MS.gene066901.t1.exon1;Parent=MS.gene066901.t1
chr8.4 CDS 54716262 54716300 54716262 ID=cds.MS.gene066901.t1;Parent=MS.gene066901.t1
chr8.4 exon 54716467 54717167 54716467 ID=MS.gene066901.t1.exon2;Parent=MS.gene066901.t1
chr8.4 CDS 54716467 54717167 54716467 ID=cds.MS.gene066901.t1;Parent=MS.gene066901.t1
chr8.4 exon 54717393 54718266 54717393 ID=MS.gene066901.t1.exon3;Parent=MS.gene066901.t1
chr8.4 CDS 54717393 54718266 54717393 ID=cds.MS.gene066901.t1;Parent=MS.gene066901.t1
Gene Sequence

>MS.gene066901

ATGGCCTCAAAGCCTATCAAAATGCCTGATTCACCTCATGTAAGCATTTCATGTCAGTTAAATTTCTAAAACAAATAATTTGGTCCTAATAATTAAAGCCTAATATAATACTGTTCTATAACAGACAAATTAATTATTTATGATTTTAGGAAGTGATTATCAAAATTCAAAACCTTCTATTTTACACATTACTAAATAAATGCAGATGAGTAACAACGGCTTACCGGAAGAAGCTCCCAAAACAGATCAAAGTTGTGCAAATGATCATACAGAAAATGATGATACTAAACAAGAGAACAATCAAGAAGCAATAGATGGTTTCACAAATCAAAACAATGCAAAGAAAACTACAAATAAACCAACATCATCACCAAGGCCACAAAAGTTAGAATCACTTATGAGAAATTTCTCCGAATTTTCCACAACTCCAAGACCAAGTCCAAGAATGATTTCAAGGAGTGGACCGAATTCACGTAGCGGTAGTCTAGAAAGCACAAGTGCACCAATATTTAAGCCTCATACAGGAGGTGATGTGAGATGGGATGCAATCAACATGGTTTCAAGAGGGTCAAGTTCAAATCTTAACTTTGGTCATTTTCGGCTTGTGAAGCGTGTTGGTTACGGTGACATTGGAAGTGTGTATCTTGTTGAACTTAAAGGGACAGGAACATTCTATGCTATGAAATTAATGGATAAGGCTTCACTTGCTAGCAGAAACAAGCTTCTTAGAGCACATACTGAAAGGGAGATTCTTGGACTTCTTGATCACCCTTTCTTGCCAACTTTGTATTCTTATTTTGAAAATGAGAAGTATTATTGTTTGGTCATGGAGTTTTGTAGTTGTGGTAGTTTGCATAACCTCAGAATGAAGCAACCCAACAAGCATTTCACTGAAAATGCTGCAAGGTTAGTCACTTTTCTTTCAGTTCAATGGCATAAAAAACGAACTTCAGTTAGTAGAGGATCGCGAACTTCTACTTCTGAATCCAATTGTCAAATCAAAGTAGAAATCACAGATAAATATAATACATTATATAAAAAACAAAATGGTATAAAATTAAAAAAATATATATATATATATATATATTCAGTATGCTAAATGCTAATTAATGAAATTTTTGTGTCATGCAGGTTTTATTGTTCAGAGATTCTATTAGCAATGGAATACCTCCACATGTTAGGAATAGTATACAGAGACTTAAAACCAGAAAACGTCCTAGTCCGAGACAATGGCCACATAATGCTATCAGATTTTGACTTATCCCTCCGTTGTTCTGTCAGCCCCACCCTCGTCAAATCCTCCTCCGCACACATAACCAGCACCACCACATCCATTGGAATCCTGGACGACGAACATGCAGTACAAGGTTGCATGCAACCATCAAGTTTCTTCTTCCCAAGAATCCTCCCATCCAAAAGAAACCGAAAATCAAAATCAGATTTCGGTCTCATGGTAGGTGGCCGTCTTCCAGAATTAATGGCAGAACCAACTAACGTCCGATCAATGTCATTCGTTGGGACACATGAGTATCTTGCTCCAGAAATTGTGCGTGGTGAAGGACACGGTAGTGCTGTTGATTGGTGGACATTTGGGATATTTTTATACGAGCTTTTATACGGAACAACACCGTTTAAAGGTAATGGAAACCGCGCTACACTTTTTAATGTTGTAGGACAGCCTTTAAGGTTTCCTGACCATCCTTCTGCGAGTCCGGTAGCTAGGGATCTTATTAGAGGGTTGCTTGTTAAAGAACCTCATAAGAGAATTGCTTATAAAAGAGGTGCTACTGAGATTAAACAACATCCATTTTTCGAAGGTGTTAATTGGGCTTTGATTCGAAGTTCGACTCCTCCAATTATACCTGAACCGTTTGATTTTAGTCAGTATGTTAGTAAGGAAACTGTTATGGCTGCTGCTGATAATAAGAAGATTGTTGATATTGTTAGTGATAAAAATAGTAAGATGCAGCATGATTCTTCTTATGAAGATTTTGAGTATTTTTAG
Protein sequence

>MS.gene066901.t1

MASKPIKMPDSPHMSNNGLPEEAPKTDQSCANDHTENDDTKQENNQEAIDGFTNQNNAKKTTNKPTSSPRPQKLESLMRNFSEFSTTPRPSPRMISRSGPNSRSGSLESTSAPIFKPHTGGDVRWDAINMVSRGSSSNLNFGHFRLVKRVGYGDIGSVYLVELKGTGTFYAMKLMDKASLASRNKLLRAHTEREILGLLDHPFLPTLYSYFENEKYYCLVMEFCSCGSLHNLRMKQPNKHFTENAARFYCSEILLAMEYLHMLGIVYRDLKPENVLVRDNGHIMLSDFDLSLRCSVSPTLVKSSSAHITSTTTSIGILDDEHAVQGCMQPSSFFFPRILPSKRNRKSKSDFGLMVGGRLPELMAEPTNVRSMSFVGTHEYLAPEIVRGEGHGSAVDWWTFGIFLYELLYGTTPFKGNGNRATLFNVVGQPLRFPDHPSASPVARDLIRGLLVKEPHKRIAYKRGATEIKQHPFFEGVNWALIRSSTPPIIPEPFDFSQYVSKETVMAAADNKKIVDIVSDKNSKMQHDSSYEDFEYF