AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene066922

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066922.t1 MTR_8g046350 92.169 166 10 1 1 166 1 163 1.33e-108 307
MS.gene066922.t1 MTR_8g051580 62.712 177 63 1 1 174 1 177 2.73e-75 223
MS.gene066922.t1 MTR_1g047550 57.714 175 71 1 1 172 1 175 4.56e-68 205
MS.gene066922.t1 MTR_4g131030 53.723 188 67 1 1 168 1 188 1.21e-66 202
MS.gene066922.t1 MTR_8g079502 58.683 167 66 1 1 164 1 167 4.82e-65 197
MS.gene066922.t1 MTR_1g063160 54.286 175 77 1 1 172 1 175 3.26e-62 190
MS.gene066922.t1 MTR_1g054265 52.976 168 76 1 1 165 1 168 1.65e-58 180
MS.gene066922.t1 MTR_4g094632 38.554 166 83 5 1 161 1 152 6.22e-31 110
MS.gene066922.t1 MTR_1g106070 44.737 114 56 2 2 108 9 122 1.56e-26 99.8
MS.gene066922.t1 MTR_3g052870 39.456 147 68 3 2 141 9 141 1.81e-26 100
MS.gene066922.t1 MTR_3g052920 51.546 97 42 2 2 93 9 105 2.42e-26 100
MS.gene066922.t1 MTR_1g105920 45.614 114 55 2 2 108 9 122 4.04e-26 100
MS.gene066922.t1 MTR_3g080940 45.378 119 57 3 1 114 8 123 4.06e-26 99.4
MS.gene066922.t1 MTR_5g045560 53.846 78 36 0 1 78 8 85 5.80e-25 97.1
MS.gene066922.t1 MTR_5g055100 55.844 77 34 0 2 78 9 85 1.41e-24 95.9
MS.gene066922.t1 MTR_1g105910 47.525 101 48 1 2 97 9 109 1.46e-24 95.9
MS.gene066922.t1 MTR_2g030740 43.590 117 59 2 2 111 9 125 2.20e-24 95.5
MS.gene066922.t1 MTR_1g077360 57.143 77 33 0 2 78 9 85 2.72e-24 95.1
MS.gene066922.t1 MTR_1g108580 38.095 147 65 2 2 122 9 155 4.70e-24 94.4
MS.gene066922.t1 MTR_8g043650 45.545 101 50 1 2 97 9 109 9.59e-24 93.6
MS.gene066922.t1 MTR_3g030770 42.149 121 65 2 2 117 9 129 1.01e-23 93.6
MS.gene066922.t1 MTR_1g012570 37.423 163 87 3 2 149 9 171 1.17e-23 93.6
MS.gene066922.t1 MTR_1g075600 55.844 77 34 0 2 78 9 85 1.75e-23 93.2
MS.gene066922.t1 MTR_4g094638 51.316 76 37 0 1 76 1 76 1.78e-23 91.7
MS.gene066922.t1 MTR_1g108510 45.045 111 55 3 2 107 9 118 1.95e-23 92.8
MS.gene066922.t1 MTR_2g105290 37.313 134 78 3 1 133 11 139 2.01e-23 91.3
MS.gene066922.t1 MTR_2g093190 37.415 147 66 1 2 122 9 155 2.05e-23 92.8
MS.gene066922.t1 MTR_5g053390 53.247 77 36 0 2 78 9 85 1.02e-22 90.9
MS.gene066922.t1 MTR_7g028448 37.879 132 66 3 17 135 27 155 1.44e-22 89.0
MS.gene066922.t1 MTR_4g036915 37.879 132 66 3 17 135 27 155 1.44e-22 89.0
MS.gene066922.t1 MTR_3g030780 51.948 77 37 0 2 78 9 85 2.81e-22 87.0
MS.gene066922.t1 MTR_0121s0080 35.714 154 84 2 2 140 9 162 2.91e-22 89.7
MS.gene066922.t1 MTR_8g086290 37.226 137 78 4 2 136 12 142 2.98e-22 88.6
MS.gene066922.t1 MTR_2g085280 53.247 77 36 0 2 78 9 85 3.70e-22 89.7
MS.gene066922.t1 MTR_2g085250 53.247 77 36 0 2 78 9 85 3.94e-22 89.4
MS.gene066922.t1 MTR_0121s0100 41.441 111 59 2 2 107 9 118 1.25e-21 85.5
MS.gene066922.t1 MTR_1g105905 41.593 113 57 2 18 125 8 116 1.26e-20 85.1
MS.gene066922.t1 MTR_5g021270 53.125 64 30 0 1 64 1 64 1.73e-19 82.4
MS.gene066922.t1 MTR_5g021270 53.125 64 30 0 1 64 1 64 1.77e-19 82.4
MS.gene066922.t1 MTR_0003s0590 52.174 69 33 0 1 69 1 69 5.11e-19 81.6
MS.gene066922.t1 MTR_5g066180 48.611 72 37 0 1 72 1 72 4.48e-18 78.6
MS.gene066922.t1 MTR_7g062350 55.556 63 28 0 16 78 35 97 6.92e-18 78.6
MS.gene066922.t1 MTR_4g127140 47.436 78 41 0 1 78 11 88 1.98e-17 75.9
MS.gene066922.t1 MTR_8g087860 34.862 109 71 0 1 109 17 125 3.52e-17 76.6
MS.gene066922.t1 MTR_5g066960 55.000 60 27 0 1 60 1 60 7.26e-17 71.2
MS.gene066922.t1 MTR_1g053070 44.444 81 45 0 1 81 1 81 7.72e-17 75.9
MS.gene066922.t1 MTR_3g452380 49.275 69 35 0 1 69 16 84 7.73e-17 75.5
MS.gene066922.t1 MTR_4g093970 38.462 117 63 2 1 108 27 143 1.10e-16 75.1
MS.gene066922.t1 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.15e-16 75.1
MS.gene066922.t1 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.26e-16 74.7
MS.gene066922.t1 MTR_2g017865 30.000 170 102 4 1 156 16 182 1.86e-16 74.7
MS.gene066922.t1 MTR_8g033270 46.377 69 37 0 1 69 1 69 2.41e-16 74.3
MS.gene066922.t1 MTR_2g009890 40.230 87 51 1 1 87 1 86 2.56e-16 74.7
MS.gene066922.t1 MTR_3g109930 32.432 148 92 4 17 159 17 161 2.64e-16 72.8
MS.gene066922.t1 MTR_3g005530 44.928 69 38 0 1 69 1 69 3.26e-16 73.6
MS.gene066922.t1 MTR_3g067910 50.820 61 30 0 18 78 6 66 3.93e-16 70.5
MS.gene066922.t1 MTR_8g033220 36.893 103 62 2 1 101 1 102 6.70e-16 72.8
MS.gene066922.t1 MTR_3g067875 58.333 48 20 0 18 65 8 55 6.73e-16 68.9
MS.gene066922.t1 MTR_8g033220 36.893 103 62 2 1 101 1 102 7.74e-16 72.8
MS.gene066922.t1 MTR_3g113030 48.611 72 35 1 1 72 1 70 9.87e-16 72.4
MS.gene066922.t1 MTR_5g032150 42.857 84 47 1 1 84 1 83 1.68e-15 71.6
MS.gene066922.t1 MTR_1g108500 57.377 61 23 1 4 64 102 159 1.83e-15 72.8
MS.gene066922.t1 MTR_7g075870 33.663 101 67 0 1 101 1 101 1.88e-15 71.2
MS.gene066922.t1 MTR_5g032520 42.857 84 47 1 1 84 1 83 2.14e-15 71.6
MS.gene066922.t1 MTR_1g038300 46.479 71 36 1 1 69 1 71 4.60e-15 70.5
MS.gene066922.t1 MTR_7g075870 51.724 58 28 0 1 58 1 58 6.50e-15 70.1
MS.gene066922.t1 MTR_4g102530 43.478 69 39 0 1 69 1 69 8.65e-15 69.3
MS.gene066922.t1 MTR_4g093030 54.386 57 26 0 1 57 1 57 1.39e-14 67.8
MS.gene066922.t1 MTR_2g461710 49.123 57 29 0 1 57 1 57 1.49e-14 65.1
MS.gene066922.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.52e-14 68.6
MS.gene066922.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.55e-14 68.6
MS.gene066922.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.71e-14 68.2
MS.gene066922.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.79e-14 68.2
MS.gene066922.t1 MTR_1g101970 43.662 71 40 0 1 71 1 71 2.03e-14 68.2
MS.gene066922.t1 MTR_7g016600 50.877 57 28 0 1 57 1 57 2.50e-14 68.9
MS.gene066922.t1 MTR_4g084740 46.479 71 37 1 1 70 1 71 2.92e-14 69.7
MS.gene066922.t1 MTR_1g029670 35.345 116 58 3 1 114 1 101 3.69e-14 67.4
MS.gene066922.t1 MTR_5g046870 50.877 57 28 0 1 57 1 57 3.72e-14 65.5
MS.gene066922.t1 MTR_4g109830 36.170 94 47 2 1 81 1 94 5.45e-14 67.8
MS.gene066922.t1 MTR_8g066260 41.667 72 39 1 1 72 1 69 7.25e-14 67.4
MS.gene066922.t1 MTR_3g084980 52.632 57 27 0 1 57 1 57 8.17e-14 67.4
MS.gene066922.t1 MTR_3g088615 41.538 65 38 0 1 65 1 65 1.16e-13 65.9
MS.gene066922.t1 MTR_6g015975 50.877 57 28 0 1 57 1 57 1.16e-13 67.0
MS.gene066922.t1 MTR_8g097090 50.877 57 28 0 1 57 1 57 1.19e-13 67.0
MS.gene066922.t1 MTR_5g046790 45.614 57 31 0 1 57 1 57 1.30e-13 66.2
MS.gene066922.t1 MTR_7g016630 38.356 73 44 1 1 72 1 73 1.63e-13 66.6
MS.gene066922.t1 MTR_4g109810 49.123 57 29 0 1 57 1 57 2.01e-13 66.2
MS.gene066922.t1 MTR_3g102570 42.254 71 40 1 1 70 1 71 2.33e-13 67.0
MS.gene066922.t1 MTR_8g022970 36.893 103 54 2 20 122 36 127 2.49e-13 65.1
MS.gene066922.t1 MTR_7g075850 52.632 57 27 0 1 57 1 57 3.88e-13 65.9
MS.gene066922.t1 MTR_3g437790 45.902 61 32 1 19 78 30 90 1.20e-12 63.2
MS.gene066922.t1 MTR_6g464720 40.278 72 42 1 1 71 1 72 1.66e-12 63.9
MS.gene066922.t1 MTR_1g041615 60.870 46 18 0 13 58 17 62 2.26e-12 61.6
MS.gene066922.t1 MTR_5g041650 50.000 54 27 0 1 54 38 91 3.34e-12 63.9
MS.gene066922.t1 MTR_3g067870 52.083 48 23 0 18 65 92 139 4.55e-12 61.2
MS.gene066922.t1 MTR_4g051538 31.250 96 54 2 19 108 26 115 1.55e-11 61.2
MS.gene066922.t1 MTR_4g108720 30.075 133 66 2 1 106 1 133 2.32e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene066922.t1 AT2G34440 38.596 171 92 2 1 158 1 171 2.56e-35 122
MS.gene066922.t1 AT3G66656 48.819 127 59 2 1 121 1 127 1.12e-31 112
MS.gene066922.t1 AT2G24840 43.548 124 59 3 1 117 62 181 3.48e-28 105
MS.gene066922.t1 AT5G60440 43.662 142 69 4 2 136 7 144 2.91e-27 104
MS.gene066922.t1 AT4G36590 38.554 166 77 5 2 157 7 157 2.66e-25 98.2
MS.gene066922.t1 AT1G01530 41.007 139 75 2 1 136 6 140 4.12e-24 95.1
MS.gene066922.t1 AT1G65360 38.621 145 70 4 1 136 6 140 2.78e-22 89.7
MS.gene066922.t1 AT1G72350 40.496 121 65 3 2 122 43 156 2.34e-20 84.7
MS.gene066922.t1 AT1G47760 40.000 95 55 1 1 95 1 93 1.02e-19 82.0
MS.gene066922.t1 AT3G61120 31.138 167 103 4 1 155 1 167 2.34e-19 82.4
MS.gene066922.t1 AT5G65070 39.496 119 68 4 1 116 1 118 2.65e-19 80.1
MS.gene066922.t1 AT4G24540 40.230 87 52 0 1 87 1 87 5.76e-19 80.9
MS.gene066922.t1 AT5G65070 37.857 140 80 5 1 134 1 139 8.76e-19 80.1
MS.gene066922.t1 AT5G13790 37.705 122 54 1 1 122 1 100 1.43e-18 80.9
MS.gene066922.t1 AT5G13790 40.206 97 58 0 1 97 1 97 2.52e-18 80.1
MS.gene066922.t1 AT3G57390 50.725 69 34 0 1 69 1 69 5.74e-18 78.2
MS.gene066922.t1 AT1G28460 46.377 69 37 0 2 70 8 76 6.26e-18 77.4
MS.gene066922.t1 AT1G29962 45.833 72 39 0 2 73 8 79 7.48e-18 77.0
MS.gene066922.t1 AT3G57390 50.725 69 34 0 1 69 1 69 1.00e-17 78.2
MS.gene066922.t1 AT3G57230 46.377 69 37 0 1 69 1 69 1.40e-17 75.5
MS.gene066922.t1 AT4G22950 47.826 69 36 0 1 69 1 69 2.07e-17 75.9
MS.gene066922.t1 AT3G57230 46.377 69 37 0 1 69 1 69 2.82e-17 76.6
MS.gene066922.t1 AT3G57230 46.377 69 37 0 1 69 1 69 2.82e-17 76.6
MS.gene066922.t1 AT2G22540 39.423 104 61 2 1 103 1 103 2.88e-17 76.6
MS.gene066922.t1 AT2G22540 39.423 104 61 2 1 103 1 103 2.88e-17 76.6
MS.gene066922.t1 AT5G65080 35.915 142 85 3 1 136 8 149 4.64e-17 75.1
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 1 86 4.77e-17 75.9
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 2 87 5.07e-17 75.9
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 1 86 5.15e-17 75.9
MS.gene066922.t1 AT5G65070 40.426 94 54 1 1 94 1 92 5.40e-17 75.9
MS.gene066922.t1 AT2G45650 46.377 69 37 0 1 69 1 69 5.82e-17 76.3
MS.gene066922.t1 AT2G22630 49.275 69 35 0 1 69 1 69 7.67e-17 75.5
MS.gene066922.t1 AT2G22630 49.275 69 35 0 1 69 1 69 7.67e-17 75.5
MS.gene066922.t1 AT5G65070 40.860 93 53 1 1 93 1 91 8.05e-17 75.1
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 11 96 8.12e-17 75.5
MS.gene066922.t1 AT2G45660 34.286 105 69 0 1 105 1 105 9.62e-17 73.6
MS.gene066922.t1 AT3G04100 43.421 76 40 1 2 74 14 89 9.80e-17 74.7
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 27 112 1.08e-16 75.5
MS.gene066922.t1 AT4G09960 38.462 91 51 1 1 91 96 181 1.23e-16 76.3
MS.gene066922.t1 AT5G10140 54.386 57 26 0 1 57 1 57 1.71e-16 73.2
MS.gene066922.t1 AT1G17310 58.621 58 22 1 17 74 63 118 1.75e-16 74.3
MS.gene066922.t1 AT4G22950 47.826 69 36 0 1 69 1 69 1.79e-16 74.3
MS.gene066922.t1 AT4G22950 47.826 69 36 0 1 69 1 69 1.79e-16 74.3
MS.gene066922.t1 AT1G17310 58.621 58 22 1 17 74 74 129 2.49e-16 73.9
MS.gene066922.t1 AT2G45660 34.286 105 69 0 1 105 1 105 3.20e-16 73.6
MS.gene066922.t1 AT5G10140 53.448 58 27 0 1 58 1 58 3.23e-16 72.8
MS.gene066922.t1 AT5G10140 54.386 57 26 0 1 57 1 57 3.35e-16 72.8
MS.gene066922.t1 AT4G37940 46.377 69 37 0 1 69 1 69 3.51e-16 73.6
MS.gene066922.t1 AT5G51870 46.377 69 37 0 1 69 1 69 3.81e-16 73.2
MS.gene066922.t1 AT5G65070 45.070 71 37 1 1 69 1 71 3.93e-16 73.6
MS.gene066922.t1 AT5G10140 54.386 57 26 0 1 57 1 57 3.98e-16 72.8
MS.gene066922.t1 AT5G51870 46.377 69 37 0 1 69 1 69 4.01e-16 72.4
MS.gene066922.t1 AT3G54340 50.000 62 31 0 1 62 1 62 4.05e-16 73.6
MS.gene066922.t1 AT4G37940 46.377 69 37 0 1 69 1 69 4.81e-16 73.2
MS.gene066922.t1 AT5G51870 46.377 69 37 0 1 69 24 92 6.59e-16 72.4
MS.gene066922.t1 AT5G51870 46.377 69 37 0 1 69 1 69 7.50e-16 72.4
MS.gene066922.t1 AT4G37940 43.210 81 42 1 1 77 1 81 9.68e-16 71.2
MS.gene066922.t1 AT5G51870 46.377 69 37 0 1 69 11 79 1.17e-15 72.4
MS.gene066922.t1 AT2G22540 56.364 55 24 0 1 55 1 55 1.64e-15 72.0
MS.gene066922.t1 AT2G42830 38.298 94 53 2 1 94 16 104 1.91e-15 72.0
MS.gene066922.t1 AT2G42830 38.298 94 53 2 1 94 16 104 1.92e-15 72.0
MS.gene066922.t1 AT5G51860 46.377 69 37 0 1 69 1 69 2.05e-15 71.2
MS.gene066922.t1 AT5G51860 46.377 69 37 0 1 69 1 69 2.22e-15 71.2
MS.gene066922.t1 AT4G11880 53.448 58 27 0 1 58 1 58 2.35e-15 70.5
MS.gene066922.t1 AT4G11880 53.448 58 27 0 1 58 1 58 2.35e-15 70.5
MS.gene066922.t1 AT3G58780 38.298 94 53 2 1 94 16 104 2.42e-15 71.6
MS.gene066922.t1 AT5G65060 56.364 55 24 0 1 55 1 55 2.59e-15 70.5
MS.gene066922.t1 AT3G58780 38.298 94 53 2 1 94 22 110 2.72e-15 71.6
MS.gene066922.t1 AT5G20240 49.206 63 32 0 1 63 1 63 3.07e-15 69.3
MS.gene066922.t1 AT5G65050 54.545 55 25 0 1 55 1 55 3.19e-15 70.1
MS.gene066922.t1 AT3G58780 40.698 86 38 1 1 73 16 101 3.96e-15 70.9
MS.gene066922.t1 AT5G65060 56.364 55 24 0 1 55 1 55 4.13e-15 70.1
MS.gene066922.t1 AT1G22130 49.296 71 35 1 1 70 1 71 4.23e-15 72.0
MS.gene066922.t1 AT5G65060 56.364 55 24 0 1 55 1 55 4.49e-15 69.7
MS.gene066922.t1 AT3G58780 38.298 94 53 2 1 94 16 104 4.87e-15 71.2
MS.gene066922.t1 AT5G23260 59.649 57 23 0 1 57 1 57 5.32e-15 70.9
MS.gene066922.t1 AT5G23260 59.649 57 23 0 1 57 17 73 5.52e-15 70.9
MS.gene066922.t1 AT5G23260 59.649 57 23 0 1 57 17 73 5.54e-15 70.9
MS.gene066922.t1 AT2G14210 53.448 58 27 0 1 58 1 58 5.90e-15 70.5
MS.gene066922.t1 AT1G71692 50.000 62 31 0 1 62 1 62 6.07e-15 70.1
MS.gene066922.t1 AT5G23260 59.649 57 23 0 1 57 1 57 6.10e-15 70.5
MS.gene066922.t1 AT5G20240 49.206 63 32 0 1 63 1 63 6.90e-15 69.7
MS.gene066922.t1 AT4G11880 53.448 58 27 0 1 58 1 58 6.94e-15 70.1
MS.gene066922.t1 AT4G11880 53.448 58 27 0 1 58 1 58 6.94e-15 70.1
MS.gene066922.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.45e-15 68.6
MS.gene066922.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.45e-15 68.6
MS.gene066922.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.45e-15 68.6
MS.gene066922.t1 AT2G14210 53.448 58 27 0 1 58 1 58 7.81e-15 70.1
MS.gene066922.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.60e-15 68.2
MS.gene066922.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.60e-15 68.2
MS.gene066922.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.60e-15 68.2
MS.gene066922.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.60e-15 68.2
MS.gene066922.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.60e-15 68.2
MS.gene066922.t1 AT5G62165 40.000 75 45 0 1 75 1 75 1.04e-14 67.0
MS.gene066922.t1 AT2G03710 54.386 57 26 0 1 57 1 57 1.20e-14 68.6
MS.gene066922.t1 AT4G18960 45.588 68 37 0 2 69 18 85 1.21e-14 69.7
MS.gene066922.t1 AT1G77980 47.887 71 36 1 1 70 1 71 1.43e-14 70.5
MS.gene066922.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.47e-14 68.6
MS.gene066922.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.52e-14 68.6
MS.gene066922.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.54e-14 68.6
MS.gene066922.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene066922.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene066922.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene066922.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.96e-14 68.2
MS.gene066922.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.96e-14 68.2
MS.gene066922.t1 AT4G37435 30.636 173 92 6 1 147 1 171 2.08e-14 68.2
MS.gene066922.t1 AT5G65080 50.909 55 27 0 1 55 8 62 3.06e-14 68.2
MS.gene066922.t1 AT3G30260 49.123 57 29 0 1 57 1 57 3.31e-14 68.6
MS.gene066922.t1 AT3G58780 50.847 59 29 0 1 59 16 74 3.32e-14 68.9
MS.gene066922.t1 AT1G69120 43.056 72 38 1 1 72 1 69 4.05e-14 68.2
MS.gene066922.t1 AT2G03710 54.386 57 26 0 1 57 1 57 4.68e-14 68.2
MS.gene066922.t1 AT2G03710 54.386 57 26 0 1 57 1 57 5.02e-14 68.2
MS.gene066922.t1 AT1G46408 48.148 81 35 4 1 74 1 81 6.96e-14 67.8
MS.gene066922.t1 AT1G69120 43.056 72 38 1 1 72 1 69 7.91e-14 67.8
MS.gene066922.t1 AT5G15800 50.877 57 28 0 1 57 1 57 8.21e-14 67.4
MS.gene066922.t1 AT3G02310 50.877 57 28 0 1 57 1 57 8.77e-14 66.6
MS.gene066922.t1 AT1G28450 40.278 72 43 0 2 73 8 79 9.32e-14 66.2
MS.gene066922.t1 AT5G15800 50.877 57 28 0 1 57 1 57 1.35e-13 67.0
MS.gene066922.t1 AT5G60910 40.278 72 40 1 1 72 1 69 1.45e-13 66.6
MS.gene066922.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.52e-13 67.0
MS.gene066922.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.65e-13 66.6
MS.gene066922.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.67e-13 66.6
MS.gene066922.t1 AT3G02310 50.877 57 28 0 1 57 1 57 1.74e-13 66.6
MS.gene066922.t1 AT1G26310 46.552 58 31 0 1 58 1 58 1.89e-13 66.6
MS.gene066922.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.06e-12 65.5
MS.gene066922.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.11e-12 65.5
MS.gene066922.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.18e-12 65.5
MS.gene066922.t1 AT5G49490 44.444 72 36 1 3 70 46 117 1.71e-12 64.3
MS.gene066922.t1 AT1G69540 40.000 75 44 1 1 74 1 75 1.86e-12 64.7
MS.gene066922.t1 AT5G38620 43.056 72 37 1 3 70 6 77 2.25e-12 64.3
MS.gene066922.t1 AT1G69540 40.000 75 44 1 1 74 1 75 2.32e-12 64.3
MS.gene066922.t1 AT5G49420 42.857 77 39 2 3 74 8 84 2.73e-12 63.9
MS.gene066922.t1 AT5G04640 40.260 77 41 2 3 74 5 81 3.26e-12 63.9
MS.gene066922.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.28e-12 62.0
MS.gene066922.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.28e-12 62.0
MS.gene066922.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.28e-12 62.0
MS.gene066922.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.28e-12 62.0
MS.gene066922.t1 AT1G60920 33.775 151 78 7 3 146 5 140 1.07e-11 60.8
MS.gene066922.t1 AT2G26320 35.294 85 49 1 1 79 17 101 2.13e-11 58.2
MS.gene066922.t1 AT1G77080 66.667 39 13 0 1 39 1 39 3.01e-11 59.3
MS.gene066922.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.40e-11 61.2
MS.gene066922.t1 AT1G77080 66.667 39 13 0 1 39 1 39 3.42e-11 59.3
MS.gene066922.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.50e-11 60.8
MS.gene066922.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.50e-11 60.8
MS.gene066922.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.50e-11 60.8
MS.gene066922.t1 AT1G77080 66.667 39 13 0 1 39 1 39 5.58e-11 58.2
MS.gene066922.t1 AT1G77080 66.667 39 13 0 1 39 1 39 7.26e-11 58.9

Find 49 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATACAACAATAGCAATTT+TGG 0.202437 8.4:-54967628 None:intergenic
GGGAATAAACCTTACTCTTT+TGG 0.260036 8.4:+54967657 MS.gene066922:CDS
CCATCACCTTCTCATGTTGT+TGG 0.285658 8.4:-54967779 None:intergenic
TGTTAGAGGAAGGGGTTTCT+AGG 0.312060 8.4:-54967743 None:intergenic
AATGTGACTTGTCTCGCCTC+TGG 0.338519 8.4:-54967546 None:intergenic
ATTAATGGAGCTCAAGGATA+TGG 0.358058 8.4:+54967902 MS.gene066922:CDS
GGAATGGAAAGATTCATTAA+TGG 0.365090 8.4:+54967887 MS.gene066922:CDS
ATTCCTTAGGCTGGCTGAGT+AGG 0.404026 8.4:-54967869 None:intergenic
ACATTCTCAAAGCGCCGAAT+GGG 0.416565 8.4:+54967564 MS.gene066922:CDS
TTCTAGGACATCGTTTAGAT+CGG 0.426926 8.4:-54967727 None:intergenic
GTTCAGATCATCTATGTTAG+AGG 0.427003 8.4:-54967757 None:intergenic
GCTATTGTTGTATTCTCTCC+CGG 0.429351 8.4:+54967636 MS.gene066922:CDS
ATCATCTATGTTAGAGGAAG+GGG 0.438239 8.4:-54967751 None:intergenic
TGATATAGCTGAGGCTGAAA+AGG 0.444985 8.4:+54967803 MS.gene066922:CDS
AATCTTTCCATTCCTTAGGC+TGG 0.454254 8.4:-54967878 None:intergenic
AAAAGAGTAAGGTTTATTCC+CGG 0.457419 8.4:-54967655 None:intergenic
TCTAGGACATCGTTTAGATC+GGG 0.468128 8.4:-54967726 None:intergenic
ATGTGACTTGTCTCGCCTCT+GGG 0.475748 8.4:-54967545 None:intergenic
TTCCTTAGGCTGGCTGAGTA+GGG 0.493210 8.4:-54967868 None:intergenic
CACATTCTCAAAGCGCCGAA+TGG 0.503482 8.4:+54967563 MS.gene066922:CDS
CCAGGGTGGCCAAAAGAGTA+AGG 0.504633 8.4:-54967666 None:intergenic
TATGCTAAAAGAATACAAAT+CGG 0.512468 8.4:+54967845 MS.gene066922:CDS
ACGAGCTTGCCATCTTGTGT+GGG 0.513990 8.4:+54967604 MS.gene066922:CDS
AATGAATCTTTCCATTCCTT+AGG 0.516915 8.4:-54967882 None:intergenic
AACGAGCTTGCCATCTTGTG+TGG 0.526962 8.4:+54967603 MS.gene066922:CDS
AGATTCATTAATGGAGCTCA+AGG 0.527990 8.4:+54967896 MS.gene066922:CDS
CTATTGTTGTATTCTCTCCC+GGG 0.529578 8.4:+54967637 MS.gene066922:CDS
TGAGGCTGAAAAGGAAGATA+AGG 0.530489 8.4:+54967812 MS.gene066922:CDS
TTCTATGATGCTCCTTGCAA+AGG 0.533227 8.4:+54967959 MS.gene066922:CDS
CAACCACGGGCTCCTTTGCA+AGG 0.540458 8.4:-54967971 None:intergenic
AACCAAGCCACAGAAAAGAA+AGG 0.541403 8.4:+54968002 MS.gene066922:CDS
GACGCAATAGCATCAACACC+AGG 0.542737 8.4:-54967684 None:intergenic
GGCCCTACTCAGCCAGCCTA+AGG 0.543600 8.4:+54967866 MS.gene066922:CDS
AAAGAGTAAGGTTTATTCCC+GGG 0.547640 8.4:-54967654 None:intergenic
ACAATTAACTCATTATGGGT+CGG 0.550393 8.4:+54967493 None:intergenic
AGATCATCTATGTTAGAGGA+AGG 0.556275 8.4:-54967753 None:intergenic
GATCATCTATGTTAGAGGAA+GGG 0.557711 8.4:-54967752 None:intergenic
CTTGCAAAGGAGCCCGTGGT+TGG 0.559070 8.4:+54967972 MS.gene066922:CDS
TACTCAGCCAGCCTAAGGAA+TGG 0.565385 8.4:+54967871 MS.gene066922:CDS
TCTGAACCAACAACATGAGA+AGG 0.616384 8.4:+54967773 MS.gene066922:CDS
AAAGGAAGATAAGGCCAATG+AGG 0.641735 8.4:+54967821 MS.gene066922:CDS
GCGCAAAATTGAGATTGCGA+TGG 0.644560 8.4:+54967515 MS.gene066922:CDS
CATTCTCAAAGCGCCGAATG+GGG 0.649352 8.4:+54967565 MS.gene066922:CDS
CGAGCTTGCCATCTTGTGTG+GGG 0.663768 8.4:+54967605 MS.gene066922:CDS
GCTCCTTGCAAAGGAGCCCG+TGG 0.674787 8.4:+54967968 MS.gene066922:CDS
CCAACAACATGAGAAGGTGA+TGG 0.695579 8.4:+54967779 MS.gene066922:CDS
GGTGATGGCTGATATAGCTG+AGG 0.696275 8.4:+54967794 MS.gene066922:CDS
ACGCAATAGCATCAACACCA+GGG 0.722765 8.4:-54967683 None:intergenic
CAATAGCATCAACACCAGGG+TGG 0.755219 8.4:-54967680 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGCTAAAAGAATACAAAT+CGG + chr8.4:54967845-54967864 MS.gene066922:CDS 20.0%
!! ATATTTTCCTTTCTTTTCTG+TGG - chr8.4:54968012-54968031 None:intergenic 25.0%
!! GAATACAACAATAGCAATTT+TGG - chr8.4:54967631-54967650 None:intergenic 25.0%
AAAAGAGTAAGGTTTATTCC+CGG - chr8.4:54967658-54967677 None:intergenic 30.0%
AATGAATCTTTCCATTCCTT+AGG - chr8.4:54967885-54967904 None:intergenic 30.0%
GGAATGGAAAGATTCATTAA+TGG + chr8.4:54967887-54967906 MS.gene066922:CDS 30.0%
! TTCTTTTAGCATATCCTCAT+TGG - chr8.4:54967838-54967857 None:intergenic 30.0%
!! TTGGTTTTTAATTCCAACCA+CGG - chr8.4:54967988-54968007 None:intergenic 30.0%
!!! CTTTTTTGAATAACCCCATT+CGG - chr8.4:54967581-54967600 None:intergenic 30.0%
AAAGAGTAAGGTTTATTCCC+GGG - chr8.4:54967657-54967676 None:intergenic 35.0%
AGATCATCTATGTTAGAGGA+AGG - chr8.4:54967756-54967775 None:intergenic 35.0%
AGATTCATTAATGGAGCTCA+AGG + chr8.4:54967896-54967915 MS.gene066922:CDS 35.0%
ATCATCTATGTTAGAGGAAG+GGG - chr8.4:54967754-54967773 None:intergenic 35.0%
ATTAATGGAGCTCAAGGATA+TGG + chr8.4:54967902-54967921 MS.gene066922:CDS 35.0%
GATCATCTATGTTAGAGGAA+GGG - chr8.4:54967755-54967774 None:intergenic 35.0%
GTTCAGATCATCTATGTTAG+AGG - chr8.4:54967760-54967779 None:intergenic 35.0%
! GGGAATAAACCTTACTCTTT+TGG + chr8.4:54967657-54967676 MS.gene066922:CDS 35.0%
!! TGGTTTTTAATTCCAACCAC+GGG - chr8.4:54967987-54968006 None:intergenic 35.0%
!! TTCTAGGACATCGTTTAGAT+CGG - chr8.4:54967730-54967749 None:intergenic 35.0%
AAAGGAAGATAAGGCCAATG+AGG + chr8.4:54967821-54967840 MS.gene066922:CDS 40.0%
AACCAAGCCACAGAAAAGAA+AGG + chr8.4:54968002-54968021 MS.gene066922:CDS 40.0%
AATCTTTCCATTCCTTAGGC+TGG - chr8.4:54967881-54967900 None:intergenic 40.0%
CTATTGTTGTATTCTCTCCC+GGG + chr8.4:54967637-54967656 MS.gene066922:CDS 40.0%
GCTATTGTTGTATTCTCTCC+CGG + chr8.4:54967636-54967655 MS.gene066922:CDS 40.0%
TCTGAACCAACAACATGAGA+AGG + chr8.4:54967773-54967792 MS.gene066922:CDS 40.0%
TGAGGCTGAAAAGGAAGATA+AGG + chr8.4:54967812-54967831 MS.gene066922:CDS 40.0%
TGATATAGCTGAGGCTGAAA+AGG + chr8.4:54967803-54967822 MS.gene066922:CDS 40.0%
TTCTATGATGCTCCTTGCAA+AGG + chr8.4:54967959-54967978 MS.gene066922:CDS 40.0%
! TCTAGGACATCGTTTAGATC+GGG - chr8.4:54967729-54967748 None:intergenic 40.0%
! TTCCTTTCTTTTCTGTGGCT+TGG - chr8.4:54968007-54968026 None:intergenic 40.0%
ACGCAATAGCATCAACACCA+GGG - chr8.4:54967686-54967705 None:intergenic 45.0%
CCAACAACATGAGAAGGTGA+TGG + chr8.4:54967779-54967798 MS.gene066922:CDS 45.0%
CCATCACCTTCTCATGTTGT+TGG - chr8.4:54967782-54967801 None:intergenic 45.0%
GCGCAAAATTGAGATTGCGA+TGG + chr8.4:54967515-54967534 MS.gene066922:CDS 45.0%
TGTTAGAGGAAGGGGTTTCT+AGG - chr8.4:54967746-54967765 None:intergenic 45.0%
!! AATTTTGGCCCCACACAAGA+TGG - chr8.4:54967616-54967635 None:intergenic 45.0%
!! ACATTCTCAAAGCGCCGAAT+GGG + chr8.4:54967564-54967583 MS.gene066922:CDS 45.0%
AACGAGCTTGCCATCTTGTG+TGG + chr8.4:54967603-54967622 MS.gene066922:CDS 50.0%
ACGAGCTTGCCATCTTGTGT+GGG + chr8.4:54967604-54967623 MS.gene066922:CDS 50.0%
CAATAGCATCAACACCAGGG+TGG - chr8.4:54967683-54967702 None:intergenic 50.0%
GACGCAATAGCATCAACACC+AGG - chr8.4:54967687-54967706 None:intergenic 50.0%
TACTCAGCCAGCCTAAGGAA+TGG + chr8.4:54967871-54967890 MS.gene066922:CDS 50.0%
TGCGATGGTGAAAAACCCAG+AGG + chr8.4:54967530-54967549 MS.gene066922:CDS 50.0%
! AATGTGACTTGTCTCGCCTC+TGG - chr8.4:54967549-54967568 None:intergenic 50.0%
! ATGTGACTTGTCTCGCCTCT+GGG - chr8.4:54967548-54967567 None:intergenic 50.0%
! ATTCCTTAGGCTGGCTGAGT+AGG - chr8.4:54967872-54967891 None:intergenic 50.0%
! GGTGATGGCTGATATAGCTG+AGG + chr8.4:54967794-54967813 MS.gene066922:CDS 50.0%
! TTCCTTAGGCTGGCTGAGTA+GGG - chr8.4:54967871-54967890 None:intergenic 50.0%
!! CACATTCTCAAAGCGCCGAA+TGG + chr8.4:54967563-54967582 MS.gene066922:CDS 50.0%
!! CATTCTCAAAGCGCCGAATG+GGG + chr8.4:54967565-54967584 MS.gene066922:CDS 50.0%
CCAGGGTGGCCAAAAGAGTA+AGG - chr8.4:54967669-54967688 None:intergenic 55.0%
CGAGCTTGCCATCTTGTGTG+GGG + chr8.4:54967605-54967624 MS.gene066922:CDS 55.0%
! CCTTACTCTTTTGGCCACCC+TGG + chr8.4:54967666-54967685 MS.gene066922:CDS 55.0%
CAACCACGGGCTCCTTTGCA+AGG - chr8.4:54967974-54967993 None:intergenic 60.0%
CTTGCAAAGGAGCCCGTGGT+TGG + chr8.4:54967972-54967991 MS.gene066922:CDS 60.0%
GCTCCTTGCAAAGGAGCCCG+TGG + chr8.4:54967968-54967987 MS.gene066922:CDS 65.0%
GGCCCTACTCAGCCAGCCTA+AGG + chr8.4:54967866-54967885 MS.gene066922:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 54967507 54968034 54967507 ID=MS.gene066922
chr8.4 mRNA 54967507 54968034 54967507 ID=MS.gene066922.t1;Parent=MS.gene066922
chr8.4 exon 54967507 54968034 54967507 ID=MS.gene066922.t1.exon1;Parent=MS.gene066922.t1
chr8.4 CDS 54967507 54968034 54967507 ID=cds.MS.gene066922.t1;Parent=MS.gene066922.t1
Gene Sequence

>MS.gene066922

ATGGGTCGGCGCAAAATTGAGATTGCGATGGTGAAAAACCCAGAGGCGAGACAAGTCACATTCTCAAAGCGCCGAATGGGGTTATTCAAAAAAGCAAACGAGCTTGCCATCTTGTGTGGGGCCAAAATTGCTATTGTTGTATTCTCTCCCGGGAATAAACCTTACTCTTTTGGCCACCCTGGTGTTGATGCTATTGCGTCTAAATTTCTTCAACAAGAGCCCGATCTAAACGATGTCCTAGAAACCCCTTCCTCTAACATAGATGATCTGAACCAACAACATGAGAAGGTGATGGCTGATATAGCTGAGGCTGAAAAGGAAGATAAGGCCAATGAGGATATGCTAAAAGAATACAAATCGGCCCTACTCAGCCAGCCTAAGGAATGGAAAGATTCATTAATGGAGCTCAAGGATATGGTAAAATCACGTCTTCGTGATTTAGATATATCAGATTCTATGATGCTCCTTGCAAAGGAGCCCGTGGTTGGAATTAAAAACCAAGCCACAGAAAAGAAAGGAAAATATTAA
Protein sequence

>MS.gene066922.t1

MGRRKIEIAMVKNPEARQVTFSKRRMGLFKKANELAILCGAKIAIVVFSPGNKPYSFGHPGVDAIASKFLQQEPDLNDVLETPSSNIDDLNQQHEKVMADIAEAEKEDKANEDMLKEYKSALLSQPKEWKDSLMELKDMVKSRLRDLDISDSMMLLAKEPVVGIKNQATEKKGKY