Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06694.t1 | AES72521.1 | 62.1 | 301 | 73 | 4 | 1 | 300 | 1 | 261 | 5.90E-93 | 350.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06694.t1 | Q9LVU8 | 52.8 | 108 | 51 | 0 | 187 | 294 | 142 | 249 | 2.6e-25 | 117.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06694.t1 | G7J7G0 | 62.1 | 301 | 73 | 4 | 1 | 300 | 1 | 261 | 4.2e-93 | 350.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene06694.t1 | TF | RWP-RK |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06694.t1 | MTR_3g091700 | 64.452 | 301 | 66 | 4 | 1 | 300 | 1 | 261 | 1.30e-134 | 382 |
| MS.gene06694.t1 | MTR_3g435550 | 47.321 | 112 | 53 | 1 | 193 | 298 | 59 | 170 | 3.79e-29 | 110 |
| MS.gene06694.t1 | MTR_5g024070 | 37.719 | 114 | 58 | 1 | 193 | 293 | 201 | 314 | 1.65e-19 | 87.4 |
| MS.gene06694.t1 | MTR_3g091720 | 75.000 | 52 | 6 | 1 | 249 | 300 | 19 | 63 | 1.56e-17 | 75.5 |
| MS.gene06694.t1 | MTR_0140s0010 | 28.652 | 178 | 107 | 6 | 138 | 299 | 65 | 238 | 4.27e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06694.t1 | AT5G53040 | 52.381 | 105 | 50 | 0 | 193 | 297 | 148 | 252 | 2.36e-32 | 120 |
| MS.gene06694.t1 | AT5G66990 | 49.550 | 111 | 45 | 1 | 198 | 297 | 164 | 274 | 1.62e-31 | 119 |
| MS.gene06694.t1 | AT1G18790 | 44.094 | 127 | 54 | 2 | 178 | 294 | 120 | 239 | 4.53e-28 | 109 |
| MS.gene06694.t1 | AT1G74480 | 43.443 | 122 | 59 | 1 | 179 | 290 | 121 | 242 | 2.95e-27 | 108 |
| MS.gene06694.t1 | AT4G35590 | 33.824 | 136 | 70 | 2 | 179 | 294 | 171 | 306 | 2.15e-17 | 81.3 |
| MS.gene06694.t1 | AT4G35590 | 33.824 | 136 | 70 | 2 | 179 | 294 | 221 | 356 | 2.79e-17 | 81.6 |
| MS.gene06694.t1 | AT5G16100 | 37.113 | 97 | 53 | 1 | 181 | 269 | 342 | 438 | 2.18e-12 | 67.4 |
Find 54 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGATAAAGCAACATTTA+AGG | 0.160226 | 3.3:+76448417 | None:intergenic |
| CATTGCAATTTGATGATATA+AGG | 0.198698 | 3.3:-76448096 | MS.gene06694:CDS |
| TCTTCATTCAATTCCATTTC+AGG | 0.242189 | 3.3:+76447607 | None:intergenic |
| AAATGTTGCTTTATCTGAAA+TGG | 0.251558 | 3.3:-76448413 | MS.gene06694:CDS |
| TTGTAGCCTTGAGCGATTTC+AGG | 0.264499 | 3.3:+76449022 | None:intergenic |
| TCAGATAAAGCAACATTTAA+GGG | 0.320326 | 3.3:+76448418 | None:intergenic |
| AATGTTGCTTTATCTGAAAT+GGG | 0.328517 | 3.3:-76448412 | MS.gene06694:CDS |
| GCCTTGAGCGATTTCAGGTT+GGG | 0.343692 | 3.3:+76449027 | None:intergenic |
| AACTACTTTGATCAAGGTAT+TGG | 0.343714 | 3.3:+76448458 | None:intergenic |
| TTGTGAACAAACAAGAGAAA+TGG | 0.359147 | 3.3:-76448306 | MS.gene06694:CDS |
| ATGATTTCATTGAGTTTGAT+TGG | 0.364629 | 3.3:-76448564 | MS.gene06694:CDS |
| TGACCTCTTCCTTATGATAC+TGG | 0.365686 | 3.3:+76448123 | None:intergenic |
| GCTTACTTGTCTGTGTTGTT+TGG | 0.372451 | 3.3:+76448974 | None:intergenic |
| AGCAATACTCTTCCCTTTGT+CGG | 0.387658 | 3.3:+76448381 | None:intergenic |
| GTTGAGGCTTCCAAGAAAAC+AGG | 0.393183 | 3.3:-76448346 | MS.gene06694:CDS |
| CCCTGCATCTATTCTTCAAA+AGG | 0.394587 | 3.3:+76448017 | None:intergenic |
| GTTAGAGAAACTTCCTGAAA+TGG | 0.395826 | 3.3:-76447620 | MS.gene06694:CDS |
| GAGTGGATTTGTTGAAGCTT+CGG | 0.430431 | 3.3:-76448242 | MS.gene06694:CDS |
| TGTTGTGTGATGCAGGAAAT+GGG | 0.433682 | 3.3:-76447685 | MS.gene06694:intron |
| GGCAAACGAGGTTGCTATGA+TGG | 0.435987 | 3.3:-76447659 | MS.gene06694:CDS |
| TGTGAACAAACAAGAGAAAT+GGG | 0.437906 | 3.3:-76448305 | MS.gene06694:CDS |
| TGTACTCATCGACAACCTTA+AGG | 0.442882 | 3.3:-76447948 | MS.gene06694:intron |
| AACTCAATGAAATCATCAAA+TGG | 0.477184 | 3.3:+76448571 | None:intergenic |
| AAATCGCTCAAGGCTACAAC+TGG | 0.479818 | 3.3:-76449018 | MS.gene06694:CDS |
| CTGCTACTTGGCAATGGTAG+TGG | 0.480934 | 3.3:+76448154 | None:intergenic |
| CTGGTACTAGTACTGCTACT+TGG | 0.482625 | 3.3:+76448142 | None:intergenic |
| TGATTTCATTGAGTTTGATT+GGG | 0.486276 | 3.3:-76448563 | MS.gene06694:CDS |
| AGGTTGAAGCTCAAGGGTTG+AGG | 0.489859 | 3.3:+76447524 | None:intergenic |
| TGTGATGCAGGAAATGGGTT+TGG | 0.499818 | 3.3:-76447680 | MS.gene06694:intron |
| GTACTAGTACCAGTATCATA+AGG | 0.506441 | 3.3:-76448132 | MS.gene06694:CDS |
| TTGTGAAGAAAGAGGTTGAA+GGG | 0.507686 | 3.3:-76448192 | MS.gene06694:CDS |
| TCTCAAAACTACTTTGATCA+AGG | 0.511922 | 3.3:+76448452 | None:intergenic |
| CTATGATGGAGAAGAAGAAA+AGG | 0.520048 | 3.3:-76447645 | MS.gene06694:CDS |
| AGCCTTGAGCGATTTCAGGT+TGG | 0.544838 | 3.3:+76449026 | None:intergenic |
| TTTGTGAAGAAAGAGGTTGA+AGG | 0.545050 | 3.3:-76448193 | MS.gene06694:CDS |
| GGTTGAAGCTCAAGGGTTGA+GGG | 0.549829 | 3.3:+76447525 | None:intergenic |
| TGTGAAGAAAGAGGTTGAAG+GGG | 0.555743 | 3.3:-76448191 | MS.gene06694:CDS |
| ATGGGGCATTACACCGACAA+AGG | 0.558093 | 3.3:-76448394 | MS.gene06694:CDS |
| TGGGGCATTACACCGACAAA+GGG | 0.567564 | 3.3:-76448393 | MS.gene06694:CDS |
| CCTGCATCTATTCTTCAAAA+GGG | 0.589493 | 3.3:+76448018 | None:intergenic |
| ACATTGAGTGCTGCTGAGAG+TGG | 0.594289 | 3.3:-76448259 | MS.gene06694:CDS |
| GTACCAGTATCATAAGGAAG+AGG | 0.604409 | 3.3:-76448126 | MS.gene06694:CDS |
| ATGTTGCTTTATCTGAAATG+GGG | 0.604762 | 3.3:-76448411 | MS.gene06694:CDS |
| GGGAAGAGTATTGCTGAGAG+TGG | 0.605279 | 3.3:-76448373 | MS.gene06694:CDS |
| GGAAATGGGTTTGGCAAACG+AGG | 0.606744 | 3.3:-76447671 | MS.gene06694:CDS |
| CTAGTACTGCTACTTGGCAA+TGG | 0.610956 | 3.3:+76448148 | None:intergenic |
| ACCCAACCTGAAATCGCTCA+AGG | 0.612787 | 3.3:-76449028 | MS.gene06694:CDS |
| GCAGGGAGCTCAACATCACT+AGG | 0.620032 | 3.3:-76448000 | MS.gene06694:CDS |
| GGTGGCCTCACAGAAAATTG+AGG | 0.625800 | 3.3:-76447979 | MS.gene06694:CDS |
| ATGAAGAAATCAAGAAGCTG+AGG | 0.626377 | 3.3:-76447591 | MS.gene06694:CDS |
| GCTGCTAAGAAAATGAATGT+TGG | 0.631864 | 3.3:-76448046 | MS.gene06694:CDS |
| GCACTCAATGTCAATGACAA+TGG | 0.653270 | 3.3:+76448271 | None:intergenic |
| AGGTTGGGTGAAGAACTCCA+TGG | 0.704568 | 3.3:+76449042 | None:intergenic |
| GGGAGCTCAACATCACTAGG+TGG | 0.707852 | 3.3:-76447997 | MS.gene06694:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAGTTAAAAAAG+GGG | + | chr3.3:76447941-76447960 | None:intergenic | 10.0% |
| !! | ACAAAAAAAAAAGTTAAAAA+AGG | + | chr3.3:76447943-76447962 | None:intergenic | 10.0% |
| !! | CAAAAAAAAAAGTTAAAAAA+GGG | + | chr3.3:76447942-76447961 | None:intergenic | 10.0% |
| !!! | ATAAATAATTTTTTATCAAC+TGG | - | chr3.3:76448846-76448865 | MS.gene06694:intron | 10.0% |
| !! | AACATAAAGAATATACCTTA+AGG | + | chr3.3:76448644-76448663 | None:intergenic | 20.0% |
| !! | GTAAAAAACAAAACAAGTTA+GGG | + | chr3.3:76447720-76447739 | None:intergenic | 20.0% |
| !! | TGATGTAAAAATGATTACTT+TGG | + | chr3.3:76448053-76448072 | None:intergenic | 20.0% |
| !! | TTTATCTATTACTTTGACTA+TGG | - | chr3.3:76447758-76447777 | MS.gene06694:intron | 20.0% |
| !!! | AGTAATCATTTTTACATCAA+TGG | - | chr3.3:76448054-76448073 | MS.gene06694:CDS | 20.0% |
| !!! | GTAATCATTTTTACATCAAT+GGG | - | chr3.3:76448055-76448074 | MS.gene06694:CDS | 20.0% |
| !!! | TTTTGATGTTCCTTTAAAAA+TGG | - | chr3.3:76448506-76448525 | MS.gene06694:CDS | 20.0% |
| ! | AAAGTTAAAAAAGGGGAAAA+CGG | + | chr3.3:76447934-76447953 | None:intergenic | 25.0% |
| ! | AACTCAATGAAATCATCAAA+TGG | + | chr3.3:76448006-76448025 | None:intergenic | 25.0% |
| ! | ATGATTTCATTGAGTTTGAT+TGG | - | chr3.3:76448010-76448029 | MS.gene06694:CDS | 25.0% |
| ! | ATTTCAATTGTCATTCAAAG+TGG | + | chr3.3:76448767-76448786 | None:intergenic | 25.0% |
| ! | CAAACAACAAAGATAATGTT+AGG | + | chr3.3:76448705-76448724 | None:intergenic | 25.0% |
| ! | GGTAAAAAACAAAACAAGTT+AGG | + | chr3.3:76447721-76447740 | None:intergenic | 25.0% |
| ! | TAAAAATCGAATAAGAACAG+AGG | + | chr3.3:76447742-76447761 | None:intergenic | 25.0% |
| ! | TCAGATAAAGCAACATTTAA+GGG | + | chr3.3:76448159-76448178 | None:intergenic | 25.0% |
| ! | TGATTTCATTGAGTTTGATT+GGG | - | chr3.3:76448011-76448030 | MS.gene06694:CDS | 25.0% |
| ! | TTCAGATAAAGCAACATTTA+AGG | + | chr3.3:76448160-76448179 | None:intergenic | 25.0% |
| ! | TTTCAATTGTCATTCAAAGT+GGG | + | chr3.3:76448766-76448785 | None:intergenic | 25.0% |
| !! | CATTGCAATTTGATGATATA+AGG | - | chr3.3:76448478-76448497 | MS.gene06694:CDS | 25.0% |
| !! | TTTGAAGTACTTAACAATGT+GGG | + | chr3.3:76448679-76448698 | None:intergenic | 25.0% |
| !! | TTTTAATGTGTACAGAATCA+TGG | - | chr3.3:76447972-76447991 | MS.gene06694:CDS | 25.0% |
| !!! | AAATGTTGCTTTATCTGAAA+TGG | - | chr3.3:76448161-76448180 | MS.gene06694:CDS | 25.0% |
| !!! | AATGTTGCTTTATCTGAAAT+GGG | - | chr3.3:76448162-76448181 | MS.gene06694:CDS | 25.0% |
| !!! | ATTTTTTATCAACTGGTCAT+AGG | - | chr3.3:76448853-76448872 | MS.gene06694:intron | 25.0% |
| !!! | CTAACATTATCTTTGTTGTT+TGG | - | chr3.3:76448703-76448722 | MS.gene06694:intron | 25.0% |
| !!! | TTTTGAAGTACTTAACAATG+TGG | + | chr3.3:76448680-76448699 | None:intergenic | 25.0% |
| AAAGAATGAACATCGAATCA+TGG | + | chr3.3:76447651-76447670 | None:intergenic | 30.0% | |
| AACTACTTTGATCAAGGTAT+TGG | + | chr3.3:76448119-76448138 | None:intergenic | 30.0% | |
| ATTCATAACAGCCAACAAAA+AGG | + | chr3.3:76448825-76448844 | None:intergenic | 30.0% | |
| GAAACTTGAAACTGTAGTTT+GGG | - | chr3.3:76448794-76448813 | MS.gene06694:intron | 30.0% | |
| TCTCAAAACTACTTTGATCA+AGG | + | chr3.3:76448125-76448144 | None:intergenic | 30.0% | |
| TCTTCATTCAATTCCATTTC+AGG | + | chr3.3:76448970-76448989 | None:intergenic | 30.0% | |
| TGAAACTTGAAACTGTAGTT+TGG | - | chr3.3:76448793-76448812 | MS.gene06694:intron | 30.0% | |
| TGTGAACAAACAAGAGAAAT+GGG | - | chr3.3:76448269-76448288 | MS.gene06694:CDS | 30.0% | |
| TTGTGAACAAACAAGAGAAA+TGG | - | chr3.3:76448268-76448287 | MS.gene06694:CDS | 30.0% | |
| ! | TTGAAGTACTTAACAATGTG+GGG | + | chr3.3:76448678-76448697 | None:intergenic | 30.0% |
| !! | AAACTGATTTCCTGTTTTCT+TGG | + | chr3.3:76448241-76448260 | None:intergenic | 30.0% |
| !! | ATCATTTTTACATCAATGGG+TGG | - | chr3.3:76448058-76448077 | MS.gene06694:CDS | 30.0% |
| !! | ATGTTGCTTTATCTGAAATG+GGG | - | chr3.3:76448163-76448182 | MS.gene06694:CDS | 30.0% |
| !! | ATTATTTTGTTGTGTGATGC+AGG | - | chr3.3:76448882-76448901 | MS.gene06694:intron | 30.0% |
| !!! | TTCTTAGCAGCCATTTTTAA+AGG | + | chr3.3:76448519-76448538 | None:intergenic | 30.0% |
| AATGTTCCACACATCATTCT+CGG | + | chr3.3:76447853-76447872 | None:intergenic | 35.0% | |
| AGTTAGGGTGATGTAGATTA+AGG | + | chr3.3:76447705-76447724 | None:intergenic | 35.0% | |
| ATGAAGAAATCAAGAAGCTG+AGG | - | chr3.3:76448983-76449002 | MS.gene06694:CDS | 35.0% | |
| CATGGTTGTTGAAATGAAAC+TGG | + | chr3.3:76447633-76447652 | None:intergenic | 35.0% | |
| CCTGCATCTATTCTTCAAAA+GGG | + | chr3.3:76448559-76448578 | None:intergenic | 35.0% | |
| GAGCATTAGACTCAAATTGT+AGG | - | chr3.3:76448733-76448752 | MS.gene06694:intron | 35.0% | |
| GCTGCTAAGAAAATGAATGT+TGG | - | chr3.3:76448528-76448547 | MS.gene06694:CDS | 35.0% | |
| GTACTAGTACCAGTATCATA+AGG | - | chr3.3:76448442-76448461 | MS.gene06694:CDS | 35.0% | |
| GTTAGAGAAACTTCCTGAAA+TGG | - | chr3.3:76448954-76448973 | MS.gene06694:intron | 35.0% | |
| TTGTGAAGAAAGAGGTTGAA+GGG | - | chr3.3:76448382-76448401 | MS.gene06694:CDS | 35.0% | |
| TTTGTGAAGAAAGAGGTTGA+AGG | - | chr3.3:76448381-76448400 | MS.gene06694:CDS | 35.0% | |
| ! | AAAAACTGAAAGTGGGTTTG+TGG | - | chr3.3:76448356-76448375 | MS.gene06694:CDS | 35.0% |
| ! | CTATGATGGAGAAGAAGAAA+AGG | - | chr3.3:76448929-76448948 | MS.gene06694:intron | 35.0% |
| ! | TGAAGTACTTAACAATGTGG+GGG | + | chr3.3:76448677-76448696 | None:intergenic | 35.0% |
| ! | TGTGGATTTTGTGAAGAAAG+AGG | - | chr3.3:76448374-76448393 | MS.gene06694:CDS | 35.0% |
| !! | CCTTTTGAAGAATAGATGCA+GGG | - | chr3.3:76448557-76448576 | MS.gene06694:CDS | 35.0% |
| ACTTGAAACTGTAGTTTGGG+TGG | - | chr3.3:76448797-76448816 | MS.gene06694:intron | 40.0% | |
| AGCAATACTCTTCCCTTTGT+CGG | + | chr3.3:76448196-76448215 | None:intergenic | 40.0% | |
| ATCAACCTCGAAAGTCGTAA+CGG | + | chr3.3:76447877-76447896 | None:intergenic | 40.0% | |
| CCCTGCATCTATTCTTCAAA+AGG | + | chr3.3:76448560-76448579 | None:intergenic | 40.0% | |
| CTTCGGCAAAAACTGAAAGT+GGG | - | chr3.3:76448349-76448368 | MS.gene06694:CDS | 40.0% | |
| GCACTCAATGTCAATGACAA+TGG | + | chr3.3:76448306-76448325 | None:intergenic | 40.0% | |
| GTACCAGTATCATAAGGAAG+AGG | - | chr3.3:76448448-76448467 | MS.gene06694:CDS | 40.0% | |
| TAGACTCAAATTGTAGGACC+AGG | - | chr3.3:76448739-76448758 | MS.gene06694:intron | 40.0% | |
| TGACCTCTTCCTTATGATAC+TGG | + | chr3.3:76448454-76448473 | None:intergenic | 40.0% | |
| TGTACTCATCGACAACCTTA+AGG | - | chr3.3:76448626-76448645 | MS.gene06694:intron | 40.0% | |
| TGTGAAGAAAGAGGTTGAAG+GGG | - | chr3.3:76448383-76448402 | MS.gene06694:CDS | 40.0% | |
| TGTTGTGTGATGCAGGAAAT+GGG | - | chr3.3:76448889-76448908 | MS.gene06694:intron | 40.0% | |
| TTGTTGTGTGATGCAGGAAA+TGG | - | chr3.3:76448888-76448907 | MS.gene06694:intron | 40.0% | |
| ! | AAGCTCCTCAATTTTCTGTG+AGG | + | chr3.3:76448603-76448622 | None:intergenic | 40.0% |
| ! | GAAGTACTTAACAATGTGGG+GGG | + | chr3.3:76448676-76448695 | None:intergenic | 40.0% |
| ! | GCTTACTTGTCTGTGTTGTT+TGG | + | chr3.3:76447603-76447622 | None:intergenic | 40.0% |
| !! | CCCTTTTGAAGAATAGATGC+AGG | - | chr3.3:76448556-76448575 | MS.gene06694:CDS | 40.0% |
| !! | GAGTGGATTTGTTGAAGCTT+CGG | - | chr3.3:76448332-76448351 | MS.gene06694:CDS | 40.0% |
| AAATCGCTCAAGGCTACAAC+TGG | - | chr3.3:76447556-76447575 | MS.gene06694:CDS | 45.0% | |
| AGTCTTCCGAGAATGATGTG+TGG | - | chr3.3:76447844-76447863 | MS.gene06694:intron | 45.0% | |
| CTGGTACTAGTACTGCTACT+TGG | + | chr3.3:76448435-76448454 | None:intergenic | 45.0% | |
| GCTTCGGCAAAAACTGAAAG+TGG | - | chr3.3:76448348-76448367 | MS.gene06694:CDS | 45.0% | |
| GTTGAGGCTTCCAAGAAAAC+AGG | - | chr3.3:76448228-76448247 | MS.gene06694:CDS | 45.0% | |
| TTGTCATTCAAAGTGGGTCC+TGG | + | chr3.3:76448760-76448779 | None:intergenic | 45.0% | |
| ! | CTAGTACTGCTACTTGGCAA+TGG | + | chr3.3:76448429-76448448 | None:intergenic | 45.0% |
| ! | TGTGATGCAGGAAATGGGTT+TGG | - | chr3.3:76448894-76448913 | MS.gene06694:intron | 45.0% |
| ! | TTGTAGCCTTGAGCGATTTC+AGG | + | chr3.3:76447555-76447574 | None:intergenic | 45.0% |
| ! | TTTGGGTGGAGCCTTTTTGT+TGG | - | chr3.3:76448811-76448830 | MS.gene06694:intron | 45.0% |
| !!! | TGCTGAGAGTGGTTTTGTTG+AGG | - | chr3.3:76448212-76448231 | MS.gene06694:CDS | 45.0% |
| ACCCAACCTGAAATCGCTCA+AGG | - | chr3.3:76447546-76447565 | MS.gene06694:CDS | 50.0% | |
| CATTGCCGTTACGACTTTCG+AGG | - | chr3.3:76447869-76447888 | MS.gene06694:intron | 50.0% | |
| GGCAAACGAGGTTGCTATGA+TGG | - | chr3.3:76448915-76448934 | MS.gene06694:intron | 50.0% | |
| GGTGGCCTCACAGAAAATTG+AGG | - | chr3.3:76448595-76448614 | MS.gene06694:intron | 50.0% | |
| ! | ACATTGAGTGCTGCTGAGAG+TGG | - | chr3.3:76448315-76448334 | MS.gene06694:CDS | 50.0% |
| ! | AGCCTTGAGCGATTTCAGGT+TGG | + | chr3.3:76447551-76447570 | None:intergenic | 50.0% |
| ! | ATGGGGCATTACACCGACAA+AGG | - | chr3.3:76448180-76448199 | MS.gene06694:CDS | 50.0% |
| ! | CTGCTACTTGGCAATGGTAG+TGG | + | chr3.3:76448423-76448442 | None:intergenic | 50.0% |
| ! | GGAAATGGGTTTGGCAAACG+AGG | - | chr3.3:76448903-76448922 | MS.gene06694:intron | 50.0% |
| ! | TGGGGCATTACACCGACAAA+GGG | - | chr3.3:76448181-76448200 | MS.gene06694:CDS | 50.0% |
| !! | GCCTTGAGCGATTTCAGGTT+GGG | + | chr3.3:76447550-76447569 | None:intergenic | 50.0% |
| !! | GGGAAGAGTATTGCTGAGAG+TGG | - | chr3.3:76448201-76448220 | MS.gene06694:CDS | 50.0% |
| GCAGGGAGCTCAACATCACT+AGG | - | chr3.3:76448574-76448593 | MS.gene06694:CDS | 55.0% | |
| GGGAGCTCAACATCACTAGG+TGG | - | chr3.3:76448577-76448596 | MS.gene06694:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76447534 | 76449062 | 76447534 | ID=MS.gene06694 |
| chr3.3 | mRNA | 76447534 | 76449062 | 76447534 | ID=MS.gene06694.t1;Parent=MS.gene06694 |
| chr3.3 | exon | 76448980 | 76449062 | 76448980 | ID=MS.gene06694.t1.exon1;Parent=MS.gene06694.t1 |
| chr3.3 | CDS | 76448980 | 76449062 | 76448980 | ID=cds.MS.gene06694.t1;Parent=MS.gene06694.t1 |
| chr3.3 | exon | 76447949 | 76448609 | 76447949 | ID=MS.gene06694.t1.exon2;Parent=MS.gene06694.t1 |
| chr3.3 | CDS | 76447949 | 76448609 | 76447949 | ID=cds.MS.gene06694.t1;Parent=MS.gene06694.t1 |
| chr3.3 | exon | 76447534 | 76447692 | 76447534 | ID=MS.gene06694.t1.exon3;Parent=MS.gene06694.t1 |
| chr3.3 | CDS | 76447534 | 76447692 | 76447534 | ID=cds.MS.gene06694.t1;Parent=MS.gene06694.t1 |
| Gene Sequence |
| Protein sequence |
