AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067243

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067243.t1 MTR_8g446900 85.797 345 40 2 1 337 1 344 0.0 610
MS.gene067243.t1 MTR_8g100050 49.007 302 144 4 3 297 101 399 1.66e-92 291
MS.gene067243.t1 MTR_8g100050 49.007 302 144 4 3 297 101 399 1.02e-91 291
MS.gene067243.t1 MTR_2g005240 46.644 298 150 4 2 293 64 358 1.29e-84 269
MS.gene067243.t1 MTR_8g027440 45.875 303 150 8 2 296 70 366 2.00e-78 253
MS.gene067243.t1 MTR_4g060460 41.358 324 166 7 1 304 93 412 5.98e-76 249
MS.gene067243.t1 MTR_4g060460 41.358 324 166 7 1 304 93 412 7.41e-76 249
MS.gene067243.t1 MTR_4g088210 42.157 306 155 6 7 293 78 380 1.36e-75 246
MS.gene067243.t1 MTR_4g021580 44.816 299 151 6 3 293 61 353 1.68e-75 244
MS.gene067243.t1 MTR_4g088210 42.157 306 155 6 7 293 78 380 1.91e-75 246
MS.gene067243.t1 MTR_2g093740 41.346 312 160 6 1 293 95 402 4.02e-75 245
MS.gene067243.t1 MTR_4g021580 44.816 299 151 6 3 293 61 353 4.22e-75 244
MS.gene067243.t1 MTR_7g062540 44.444 297 151 6 3 291 56 346 9.45e-75 244
MS.gene067243.t1 MTR_2g093740 41.346 312 160 6 1 293 95 402 1.96e-74 244
MS.gene067243.t1 MTR_2g093740 41.346 312 160 6 1 293 95 402 2.78e-74 245
MS.gene067243.t1 MTR_2g014770 42.904 303 154 5 7 293 92 391 1.92e-72 236
MS.gene067243.t1 MTR_2g014770 42.904 303 154 5 7 293 92 391 7.75e-72 236
MS.gene067243.t1 MTR_2g093740 39.692 325 160 7 1 293 95 415 2.43e-71 235
MS.gene067243.t1 MTR_2g093740 39.692 325 160 7 1 293 95 415 8.03e-71 235
MS.gene067243.t1 MTR_2g093740 39.692 325 160 7 1 293 95 415 1.61e-70 235
MS.gene067243.t1 MTR_1g024025 43.813 299 151 8 2 289 84 376 2.64e-65 224
MS.gene067243.t1 MTR_5g076270 42.667 300 158 8 2 291 65 360 6.66e-65 220
MS.gene067243.t1 MTR_2g093740 42.745 255 133 5 48 293 22 272 1.48e-64 215
MS.gene067243.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 1.54e-64 220
MS.gene067243.t1 MTR_8g079492 42.617 298 158 7 3 291 65 358 1.55e-64 220
MS.gene067243.t1 MTR_2g093740 44.351 239 122 4 62 293 38 272 3.68e-64 216
MS.gene067243.t1 MTR_2g018690 43.478 299 155 8 3 291 65 359 4.36e-64 218
MS.gene067243.t1 MTR_3g064050 41.806 299 162 7 2 291 67 362 3.55e-63 215
MS.gene067243.t1 MTR_2g043250 41.391 302 162 7 3 294 64 360 5.39e-63 217
MS.gene067243.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 1.83e-62 215
MS.gene067243.t1 MTR_4g124900 40.000 305 162 7 3 294 64 360 2.00e-62 215
MS.gene067243.t1 MTR_2g093740 42.063 252 122 5 62 293 38 285 9.22e-61 206
MS.gene067243.t1 MTR_2g093740 42.063 252 122 5 62 293 38 285 1.49e-60 206
MS.gene067243.t1 MTR_8g079492 43.214 280 146 7 21 291 1 276 2.85e-60 207
MS.gene067243.t1 MTR_8g101360 40.656 305 159 8 1 291 71 367 1.71e-59 207
MS.gene067243.t1 MTR_2g094570 34.104 346 186 6 5 309 50 394 5.08e-54 188
MS.gene067243.t1 MTR_2g094570 34.104 346 186 6 5 309 50 394 6.85e-54 188
MS.gene067243.t1 MTR_2g094570 34.211 342 183 6 5 305 106 446 1.16e-53 188
MS.gene067243.t1 MTR_4g058930 33.333 345 174 7 12 307 56 393 3.80e-52 183
MS.gene067243.t1 MTR_4g058930 33.333 345 174 7 12 307 56 393 5.88e-52 183
MS.gene067243.t1 MTR_1g094960 34.036 332 174 7 1 289 53 382 3.02e-51 180
MS.gene067243.t1 MTR_1g064430 31.351 370 192 10 8 315 69 438 1.29e-48 174
MS.gene067243.t1 MTR_1g064430 31.351 370 192 10 8 315 82 451 1.73e-48 173
MS.gene067243.t1 MTR_7g101280 31.180 356 178 12 8 307 73 417 7.41e-45 163
MS.gene067243.t1 MTR_0041s0110 31.180 356 178 12 8 307 73 417 7.41e-45 163
MS.gene067243.t1 MTR_5g040880 29.412 289 182 6 12 292 60 334 6.07e-38 142
MS.gene067243.t1 MTR_7g101275 32.130 277 165 7 8 271 34 300 1.35e-37 139
MS.gene067243.t1 MTR_3g073420 30.031 323 181 7 12 293 66 384 2.19e-37 141
MS.gene067243.t1 MTR_5g061220 28.859 298 190 4 14 289 70 367 2.66e-35 135
MS.gene067243.t1 MTR_2g024430 29.720 286 174 7 14 289 72 340 3.55e-34 132
MS.gene067243.t1 MTR_1g058210 29.568 301 187 8 1 289 51 338 2.38e-31 123
MS.gene067243.t1 MTR_5g082140 28.431 306 188 8 12 306 61 346 2.27e-30 120
MS.gene067243.t1 MTR_0041s0120 29.795 292 164 9 8 271 34 312 2.59e-28 114
MS.gene067243.t1 MTR_2g006270 29.452 292 171 10 13 289 65 336 1.26e-26 110
MS.gene067243.t1 MTR_5g040740 28.253 269 172 6 12 273 61 315 2.68e-25 105
MS.gene067243.t1 MTR_5g060630 25.538 325 186 13 9 289 58 370 1.15e-22 99.4
MS.gene067243.t1 MTR_5g460740 25.538 325 186 13 9 289 58 370 1.15e-22 99.4
MS.gene067243.t1 MTR_5g062970 33.108 148 95 1 9 152 81 228 1.31e-20 89.7
MS.gene067243.t1 MTR_2g006380 27.181 298 165 13 13 289 72 338 8.57e-20 90.5
MS.gene067243.t1 MTR_5g060780 27.333 300 175 14 10 289 59 335 3.23e-19 88.2
MS.gene067243.t1 MTR_5g460920 27.815 302 171 15 10 289 59 335 8.13e-19 87.0
MS.gene067243.t1 MTR_5g061890 26.667 300 177 14 10 289 59 335 3.09e-17 82.4
MS.gene067243.t1 MTR_3g064050 45.378 119 59 4 179 291 7 125 2.36e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067243.t1 AT5G62000 47.855 303 148 4 2 297 102 401 8.77e-95 300
MS.gene067243.t1 AT5G62000 47.855 303 148 4 2 297 102 401 8.77e-95 300
MS.gene067243.t1 AT5G62000 47.855 303 148 4 2 297 102 401 8.77e-95 300
MS.gene067243.t1 AT5G62000 47.855 303 148 4 2 297 102 401 8.77e-95 300
MS.gene067243.t1 AT5G62000 47.855 303 148 4 2 297 102 401 9.19e-95 300
MS.gene067243.t1 AT1G59750 44.108 297 155 5 2 291 63 355 3.23e-80 258
MS.gene067243.t1 AT1G59750 44.108 297 155 5 2 291 63 355 3.55e-80 258
MS.gene067243.t1 AT1G59750 44.108 297 155 5 2 291 63 355 3.55e-80 258
MS.gene067243.t1 AT1G59750 44.108 297 155 5 2 291 63 355 3.63e-80 258
MS.gene067243.t1 AT3G61830 44.781 297 150 7 2 291 16 305 7.00e-79 251
MS.gene067243.t1 AT3G61830 44.781 297 150 7 2 291 67 356 3.74e-78 251
MS.gene067243.t1 AT2G46530 43.434 297 156 6 2 292 63 353 1.41e-76 246
MS.gene067243.t1 AT2G46530 43.434 297 156 6 2 292 84 374 3.04e-76 246
MS.gene067243.t1 AT5G60450 42.581 310 151 6 1 290 80 382 1.95e-74 244
MS.gene067243.t1 AT5G60450 42.581 310 151 6 1 290 104 406 3.04e-74 244
MS.gene067243.t1 AT4G23980 43.871 310 154 10 4 300 56 358 4.61e-74 241
MS.gene067243.t1 AT4G23980 43.871 310 154 10 4 300 56 358 4.62e-74 241
MS.gene067243.t1 AT2G33860 39.474 304 165 4 6 293 92 392 9.01e-71 231
MS.gene067243.t1 AT1G19850 43.189 301 151 10 2 289 84 377 5.52e-66 224
MS.gene067243.t1 AT1G19850 43.189 301 151 10 2 289 95 388 6.43e-66 224
MS.gene067243.t1 AT5G37020 42.282 298 160 7 3 291 64 358 5.36e-65 219
MS.gene067243.t1 AT2G46530 44.770 239 121 5 59 292 34 266 5.68e-65 214
MS.gene067243.t1 AT1G19220 41.722 302 161 7 3 294 64 360 1.21e-64 221
MS.gene067243.t1 AT5G37020 42.282 298 160 7 3 291 64 358 1.24e-64 219
MS.gene067243.t1 AT2G33860 43.038 237 127 3 62 293 2 235 1.29e-62 206
MS.gene067243.t1 AT5G20730 40.728 302 164 7 3 294 65 361 3.55e-62 214
MS.gene067243.t1 AT5G20730 40.924 303 163 8 3 294 65 362 3.70e-62 214
MS.gene067243.t1 AT5G20730 40.924 303 163 8 3 294 65 362 4.85e-62 214
MS.gene067243.t1 AT1G34170 40.067 297 159 9 4 291 68 354 6.15e-62 206
MS.gene067243.t1 AT1G35540 38.567 293 167 6 4 291 70 354 1.71e-61 207
MS.gene067243.t1 AT1G34310 37.884 293 169 6 4 291 70 354 3.12e-61 206
MS.gene067243.t1 AT1G35240 37.966 295 170 6 4 293 70 356 1.56e-60 204
MS.gene067243.t1 AT1G30330 41.611 298 162 7 3 291 67 361 4.35e-60 207
MS.gene067243.t1 AT1G30330 41.611 298 162 7 3 291 67 361 4.35e-60 207
MS.gene067243.t1 AT1G30330 41.611 298 162 7 3 291 65 359 5.03e-60 207
MS.gene067243.t1 AT1G34410 37.201 293 171 6 4 291 70 354 2.38e-58 199
MS.gene067243.t1 AT1G34390 38.225 293 166 7 4 291 70 352 2.88e-57 196
MS.gene067243.t1 AT1G35520 36.519 293 173 6 4 291 70 354 1.26e-56 194
MS.gene067243.t1 AT5G37020 45.339 236 120 5 62 291 31 263 2.18e-56 195
MS.gene067243.t1 AT2G28350 33.923 339 170 7 4 289 44 381 4.12e-55 191
MS.gene067243.t1 AT2G28350 33.923 339 170 7 4 289 44 381 5.80e-55 191
MS.gene067243.t1 AT1G34170 37.884 293 145 6 4 291 68 328 2.08e-54 186
MS.gene067243.t1 AT1G34170 37.884 293 145 6 4 291 68 328 8.32e-54 185
MS.gene067243.t1 AT4G30080 33.837 331 177 9 1 289 53 383 7.77e-52 182
MS.gene067243.t1 AT1G77850 30.721 319 180 5 10 289 61 377 1.80e-43 158
MS.gene067243.t1 AT1G77850 30.721 319 180 5 10 289 61 377 1.90e-43 158
MS.gene067243.t1 AT1G43950 41.139 158 88 2 4 161 70 222 3.09e-34 125
MS.gene067243.t1 AT1G01030 37.500 96 59 1 56 151 50 144 1.27e-11 65.5
MS.gene067243.t1 AT1G01030 37.500 96 59 1 56 151 50 144 1.70e-11 65.1
MS.gene067243.t1 AT4G01500 37.778 90 53 2 62 151 36 122 3.17e-11 64.3
MS.gene067243.t1 AT2G36080 36.190 105 63 2 62 162 38 142 5.80e-11 61.2
MS.gene067243.t1 AT2G36080 36.190 105 63 2 62 162 38 142 5.80e-11 61.2
MS.gene067243.t1 AT2G46870 35.849 106 62 2 62 162 35 139 8.20e-11 62.8

Find 84 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACATTATGATCACCTTCT+TGG 0.264286 8.1:+59087018 None:intergenic
AGTTGTGGGTGTTCAATTAA+AGG 0.274617 8.1:-59090040 MS.gene067243:intron
GGACAAACCCTCTCAATATT+TGG 0.276281 8.1:+59086509 None:intergenic
TTAGAAGGCAAATGATAGTT+AGG 0.299166 8.1:+59090075 None:intergenic
ATATCCACTTTGTGATATTC+AGG 0.303834 8.1:+59086242 None:intergenic
CTAAAAGAGTAGATTTCATT+AGG 0.304482 8.1:+59089523 None:intergenic
AGGGGAGAGAATGGTGAAAT+TGG 0.305389 8.1:-59087438 MS.gene067243:CDS
AGTTGAGCATGGAATGAAAA+TGG 0.306660 8.1:-59085839 MS.gene067243:CDS
GTTGTCCATGCTGTTTCTAT+TGG 0.311077 8.1:-59087315 MS.gene067243:CDS
TGAATATCACAAAGTGGATA+TGG 0.327346 8.1:-59086240 MS.gene067243:CDS
TCCATGGTGGATTGAGCCTT+TGG 0.330320 8.1:-59086489 MS.gene067243:CDS
GAGAATGGTGAAATTGGTAT+TGG 0.352900 8.1:-59087432 MS.gene067243:CDS
CATCTATCTGCATGTTGCTT+TGG 0.355107 8.1:+59089451 None:intergenic
TTCTGAACCAGGCCACCTAA+TGG 0.364231 8.1:+59086676 None:intergenic
CCATGGTGGATTGAGCCTTT+GGG 0.374994 8.1:-59086488 MS.gene067243:CDS
AACTCTAAAAGCCTTCTTCC+TGG 0.382279 8.1:-59087661 MS.gene067243:CDS
TTATTTGATAAAGGGAGAAT+TGG 0.387439 8.1:+59086437 None:intergenic
TAGTAAGTTGCTCACTTCAA+TGG 0.390845 8.1:-59089503 MS.gene067243:CDS
GCAACAAGAATATGCATTAG+AGG 0.392171 8.1:-59089566 MS.gene067243:CDS
AGAATGGTGAAATTGGTATT+GGG 0.394064 8.1:-59087431 MS.gene067243:CDS
GTGAAATTGGTATTGGGATT+CGG 0.397543 8.1:-59087425 MS.gene067243:CDS
TATAGGTATGGTACAATAGT+TGG 0.409092 8.1:-59086716 MS.gene067243:intron
AATGCCCTTCAACATAATCT+TGG 0.411071 8.1:+59086460 None:intergenic
GAGGACAATCATGCACTTCA+TGG 0.415546 8.1:-59089547 MS.gene067243:CDS
TATCTCACCAAGGGTGGTAT+TGG 0.417596 8.1:+59087277 None:intergenic
CATCTCCTCTTAGGTGCAAT+GGG 0.419644 8.1:-59086540 MS.gene067243:intron
GCCACAAGATCTTGCATTGG+TGG 0.424734 8.1:+59088878 None:intergenic
TCTGAACCAGGCCACCTAAT+GGG 0.429682 8.1:+59086677 None:intergenic
CAAAGGAATCATAAATTCAA+AGG 0.441039 8.1:+59087119 None:intergenic
GATCTTGCATTGGTGGTTGA+AGG 0.449699 8.1:+59088885 None:intergenic
AGAGCACACTTGCTTACTAA+TGG 0.459202 8.1:-59087700 MS.gene067243:CDS
AACTGAGTAGTCTTTCTCAA+TGG 0.461873 8.1:+59087080 None:intergenic
ATTGATCCCATTAGGTGGCC+TGG 0.478400 8.1:-59086683 MS.gene067243:CDS
TGTTATTGTAGGGGAGAGAA+TGG 0.481096 8.1:-59087447 MS.gene067243:intron
ATGAAGATATTGATCCCATT+AGG 0.481523 8.1:-59086691 MS.gene067243:CDS
ATGCCCTTCAACATAATCTT+GGG 0.482861 8.1:+59086461 None:intergenic
ACATCTCCTCTTAGGTGCAA+TGG 0.483251 8.1:-59086541 MS.gene067243:intron
CACACTTGCTTACTAATGGT+TGG 0.485940 8.1:-59087696 MS.gene067243:CDS
ATCTCCCAAGATTATGTTGA+AGG 0.486743 8.1:-59086465 MS.gene067243:CDS
AAAGGAATCATAAATTCAAA+GGG 0.491970 8.1:+59087120 None:intergenic
CGCATGAATCTCCAGGAAGA+AGG 0.494401 8.1:+59087650 None:intergenic
TTATTGTTATCAGATATAGC+TGG 0.495204 8.1:-59086278 MS.gene067243:intron
AAACATTCAACTTGGAGCAT+TGG 0.497605 8.1:-59087343 MS.gene067243:CDS
ATGAAAATGGAGAGAGAGTG+AGG 0.511174 8.1:-59085826 None:intergenic
TCACAAAGTGGATATGGACT+TGG 0.522885 8.1:-59086234 MS.gene067243:CDS
AGGACATGCATGGAATTGAA+TGG 0.531700 8.1:-59088853 MS.gene067243:CDS
TCCATGTCCAATACCACCCT+TGG 0.536464 8.1:-59087284 MS.gene067243:intron
ATCTTGCATTGGTGGTTGAA+GGG 0.544075 8.1:+59088886 None:intergenic
TATTGTTATCAGATATAGCT+GGG 0.550188 8.1:-59086277 MS.gene067243:intron
TCAAGTCAAAACATTCAACT+TGG 0.553845 8.1:-59087351 MS.gene067243:CDS
ATTGAGAAAGACTACTCAGT+TGG 0.556162 8.1:-59087078 MS.gene067243:CDS
TTCGCCACAAGATCTTGCAT+TGG 0.561728 8.1:+59088875 None:intergenic
TTGGGATAAATAGTTGAGCA+TGG 0.562479 8.1:-59085850 MS.gene067243:intron
ATACATCTCCATTCTGAACC+AGG 0.563789 8.1:+59086665 None:intergenic
TAAGCTAAAACAAACCAGAT+GGG 0.570528 8.1:+59089423 None:intergenic
TTCAGAATGGAGATGTATCA+AGG 0.571681 8.1:-59086660 MS.gene067243:intron
TACATTATTTCCATTGCTCG+AGG 0.574951 8.1:-59089894 MS.gene067243:intron
AAATAACTAACCTCGAGCAA+TGG 0.576524 8.1:+59089884 None:intergenic
ATATTGAGAGGGTTTGTCCA+TGG 0.576814 8.1:-59086505 MS.gene067243:CDS
ACCACCAATGCAAGATCTTG+TGG 0.580075 8.1:-59088879 MS.gene067243:CDS
TTTCATACCAAATATTGAGA+GGG 0.580552 8.1:-59086516 MS.gene067243:CDS
TAAACCTGAATATCACAAAG+TGG 0.587495 8.1:-59086246 MS.gene067243:CDS
AATGCAAGATCTTGTGGCGA+AGG 0.588176 8.1:-59088873 MS.gene067243:CDS
TTAGGTGGCCTGGTTCAGAA+TGG 0.591720 8.1:-59086673 MS.gene067243:CDS
ATTTCATACCAAATATTGAG+AGG 0.595944 8.1:-59086517 MS.gene067243:CDS
AGACTACTCAGTTGGAAGGA+GGG 0.596500 8.1:-59087070 MS.gene067243:CDS
ACCAAGGGTGGTATTGGACA+TGG 0.602110 8.1:+59087283 None:intergenic
AAGACTACTCAGTTGGAAGG+AGG 0.602756 8.1:-59087071 MS.gene067243:CDS
TTGAGAGGGTTTGTCCATGG+TGG 0.604041 8.1:-59086502 MS.gene067243:CDS
AGAAAGACTACTCAGTTGGA+AGG 0.604367 8.1:-59087074 MS.gene067243:CDS
AAGCTAAAACAAACCAGATG+GGG 0.609072 8.1:+59089424 None:intergenic
AACTTCCAATAGAAACAGCA+TGG 0.614686 8.1:+59087310 None:intergenic
AAGTTGAAGGACGTCCAAGA+AGG 0.626816 8.1:-59087032 MS.gene067243:intron
ATTTGGTATCTCACCAAGGG+TGG 0.629284 8.1:+59087271 None:intergenic
TCTCCCAAGATTATGTTGAA+GGG 0.629441 8.1:-59086464 MS.gene067243:CDS
AGCTAAAACAAACCAGATGG+GGG 0.652605 8.1:+59089425 None:intergenic
AAGATATTGATCCCATTAGG+TGG 0.658591 8.1:-59086688 MS.gene067243:CDS
CCCAAAGGCTCAATCCACCA+TGG 0.661329 8.1:+59086488 None:intergenic
CAGATGTTGTCTGAAGTTGA+AGG 0.663022 8.1:-59087045 MS.gene067243:CDS
ATAATCTTGGGAGATCCCAA+AGG 0.675503 8.1:+59086473 None:intergenic
CTTGTGGCGAAGGACATGCA+TGG 0.681360 8.1:-59088863 MS.gene067243:CDS
TCAATGGAAACAAGTACACA+TGG 0.685853 8.1:-59089487 MS.gene067243:CDS
AAAGTGGATATGGACTTGGA+AGG 0.688175 8.1:-59086230 MS.gene067243:intron
ATGGAAACAAGTACACATGG+TGG 0.710626 8.1:-59089484 MS.gene067243:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAA+TGG - chr8.1:59087827-59087846 MS.gene067243:intron 0.0%
!! TATATATATATATATATAAT+GGG - chr8.1:59087828-59087847 MS.gene067243:intron 0.0%
!!! TTTTAATTTAAATAAAATTA+TGG + chr8.1:59086248-59086267 None:intergenic 0.0%
!! AAAATGAATAATAATGTTAT+TGG + chr8.1:59088399-59088418 None:intergenic 10.0%
!! GTTATAATTAAATAACTTAA+AGG - chr8.1:59087979-59087998 MS.gene067243:intron 10.0%
!! TCTGTTTAATATAAATAAAA+GGG - chr8.1:59087206-59087225 MS.gene067243:intron 10.0%
!! TTGTAAATAATATACTTATT+TGG - chr8.1:59085952-59085971 MS.gene067243:intron 10.0%
!!! AAATAAAATAGTTGTATTTT+GGG + chr8.1:59088117-59088136 None:intergenic 10.0%
!!! ATATATTTTATAAAAACATG+TGG + chr8.1:59086189-59086208 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr8.1:59087226-59087245 MS.gene067243:intron 100.0%
!! AAAAAAATTGTAATTCTACA+GGG + chr8.1:59086652-59086671 None:intergenic 15.0%
!! AAAGTACAAAAAAACTTAAA+AGG - chr8.1:59087948-59087967 MS.gene067243:intron 15.0%
!! ATATACAATAACATTATCAA+AGG + chr8.1:59086534-59086553 None:intergenic 15.0%
!! CAAAAATCATAAATTCTATA+CGG - chr8.1:59086849-59086868 MS.gene067243:intron 15.0%
!! CTCTGTTTAATATAAATAAA+AGG - chr8.1:59087205-59087224 MS.gene067243:intron 15.0%
!! CTGTTTAATATAAATAAAAG+GGG - chr8.1:59087207-59087226 MS.gene067243:intron 15.0%
!! GAAGAAACTAAAATAAAATA+CGG + chr8.1:59087735-59087754 None:intergenic 15.0%
!! GTATTTACTAAAATTCATAT+GGG + chr8.1:59089028-59089047 None:intergenic 15.0%
!! TATTGAAATAATTATAGAAG+AGG + chr8.1:59089808-59089827 None:intergenic 15.0%
!! TGTATTTACTAAAATTCATA+TGG + chr8.1:59089029-59089048 None:intergenic 15.0%
!! TGTTTAATATAAATAAAAGG+GGG - chr8.1:59087208-59087227 MS.gene067243:intron 15.0%
!! TTTCAAATTGTAAAATCATT+TGG + chr8.1:59088661-59088680 None:intergenic 15.0%
!!! AAAAATAAACGACAAATTTT+TGG + chr8.1:59086953-59086972 None:intergenic 15.0%
!!! AAGCATTAATTTTTCTTTAA+AGG + chr8.1:59087319-59087338 None:intergenic 15.0%
!!! AATCGTTTTTATAAAAAGTA+TGG + chr8.1:59086136-59086155 None:intergenic 15.0%
!!! AATGTTGAAAATTTAAAACT+AGG - chr8.1:59087348-59087367 MS.gene067243:CDS 15.0%
!!! AATTTATGATTTTTGATGTT+TGG + chr8.1:59086844-59086863 None:intergenic 15.0%
!!! ACATTTTTGTTTTACTTTAT+AGG - chr8.1:59089179-59089198 MS.gene067243:intron 15.0%
!!! ATATCTGTTTTATTTGATAA+AGG + chr8.1:59089487-59089506 None:intergenic 15.0%
!!! GAAATAAAATAGTTGTATTT+TGG + chr8.1:59088118-59088137 None:intergenic 15.0%
!!! TATCTGTTTTATTTGATAAA+GGG + chr8.1:59089486-59089505 None:intergenic 15.0%
!! AAAACTTAAAACGACTTAAT+TGG - chr8.1:59087519-59087538 MS.gene067243:intron 20.0%
!! AAAGGAATCATAAATTCAAA+GGG + chr8.1:59088795-59088814 None:intergenic 20.0%
!! AAATACGGAAAATAAAAGTT+AGG + chr8.1:59087720-59087739 None:intergenic 20.0%
!! AAATGGTACAAAAAAAACTA+AGG - chr8.1:59087598-59087617 MS.gene067243:intron 20.0%
!! AAGAGAAAAATATGTATAAG+AGG + chr8.1:59087783-59087802 None:intergenic 20.0%
!! AATTAACTTAAAGACCTAAA+TGG - chr8.1:59087581-59087600 MS.gene067243:intron 20.0%
!! ACAATTCTTATGTTATTGTA+GGG - chr8.1:59088455-59088474 MS.gene067243:intron 20.0%
!! AGAGAAAAATATGTATAAGA+GGG + chr8.1:59087782-59087801 None:intergenic 20.0%
!! ATATACTTATTTGGTATTGT+AGG - chr8.1:59085961-59085980 MS.gene067243:intron 20.0%
!! ATCATAATGTCAAATTACTA+TGG - chr8.1:59088905-59088924 MS.gene067243:intron 20.0%
!! ATGATACTTATAGTCTATAA+AGG - chr8.1:59089128-59089147 MS.gene067243:intron 20.0%
!! CAAAAAAATTGTAATTCTAC+AGG + chr8.1:59086653-59086672 None:intergenic 20.0%
!! GTTTAATATAAATAAAAGGG+GGG - chr8.1:59087209-59087228 MS.gene067243:intron 20.0%
!! TAAATTCATAAAAATATGCG+AGG + chr8.1:59086709-59086728 None:intergenic 20.0%
!! TTTAATATAAATAAAAGGGG+GGG - chr8.1:59087210-59087229 MS.gene067243:intron 20.0%
!!! AATATAATTTGGGTTATTAC+TGG - chr8.1:59086314-59086333 MS.gene067243:intron 20.0%
!!! AATGTATTCCTGATTTTATT+CGG - chr8.1:59087664-59087683 MS.gene067243:CDS 20.0%
!!! AGAAAAAAAAAGCATAAAAC+TGG + chr8.1:59088092-59088111 None:intergenic 20.0%
!!! ATACTTAACTTTTTTAACGA+GGG - chr8.1:59089505-59089524 MS.gene067243:CDS 20.0%
!!! CAACTATTTTATTTCAAGAA+TGG - chr8.1:59088123-59088142 MS.gene067243:intron 20.0%
!!! GAAAAAAAAAGCATAAAACT+GGG + chr8.1:59088091-59088110 None:intergenic 20.0%
!!! TAGTTTTTTTTGTACCATTT+AGG + chr8.1:59087598-59087617 None:intergenic 20.0%
!!! TATACTTAACTTTTTTAACG+AGG - chr8.1:59089504-59089523 MS.gene067243:CDS 20.0%
!!! TTTGTTTTACTTTATAGGTA+TGG - chr8.1:59089184-59089203 MS.gene067243:intron 20.0%
! AGAAAAATATGTATAAGAGG+GGG + chr8.1:59087780-59087799 None:intergenic 25.0%
! AGTCCTTATAAAGCAAAATA+AGG - chr8.1:59086789-59086808 MS.gene067243:intron 25.0%
! ATCTTAGTATCTTTCTATGT+TGG - chr8.1:59090043-59090062 MS.gene067243:CDS 25.0%
! ATGTATCAACTAAAACATCA+TGG + chr8.1:59089314-59089333 None:intergenic 25.0%
! ATTTAATTACATCTCCTCTT+AGG - chr8.1:59089363-59089382 MS.gene067243:intron 25.0%
! ATTTCATACCAAATATTGAG+AGG - chr8.1:59089395-59089414 MS.gene067243:intron 25.0%
! CAAAGGAATCATAAATTCAA+AGG + chr8.1:59088796-59088815 None:intergenic 25.0%
! CAATTCTTATGTTATTGTAG+GGG - chr8.1:59088456-59088475 MS.gene067243:intron 25.0%
! CGTATATGTGTGTATATATA+AGG - chr8.1:59086609-59086628 MS.gene067243:intron 25.0%
! CTAAAAGAGTAGATTTCATT+AGG + chr8.1:59086392-59086411 None:intergenic 25.0%
! GACAATTCTTATGTTATTGT+AGG - chr8.1:59088454-59088473 MS.gene067243:intron 25.0%
! GAGAAAAATATGTATAAGAG+GGG + chr8.1:59087781-59087800 None:intergenic 25.0%
! TAATGGCTAAATTACATCAA+AGG + chr8.1:59088006-59088025 None:intergenic 25.0%
! TATTGTTATCAGATATAGCT+GGG - chr8.1:59089635-59089654 MS.gene067243:intron 25.0%
! TCTTAGTATCTTTCTATGTT+GGG - chr8.1:59090044-59090063 MS.gene067243:CDS 25.0%
! TGTCTTTGTTACATTGTTAT+AGG - chr8.1:59086997-59087016 MS.gene067243:intron 25.0%
! TTAAAACGACTTAATTGGTA+TGG - chr8.1:59087524-59087543 MS.gene067243:intron 25.0%
! TTAATATAAATAAAAGGGGG+GGG - chr8.1:59087211-59087230 MS.gene067243:intron 25.0%
! TTATGTCATAGAAATTTACG+TGG - chr8.1:59088432-59088451 MS.gene067243:intron 25.0%
! TTATTGTTATCAGATATAGC+TGG - chr8.1:59089634-59089653 MS.gene067243:intron 25.0%
! TTATTTGATAAAGGGAGAAT+TGG + chr8.1:59089478-59089497 None:intergenic 25.0%
! TTTATTTCATTGCATTCCAT+GGG - chr8.1:59088316-59088335 MS.gene067243:intron 25.0%
! TTTCATACCAAATATTGAGA+GGG - chr8.1:59089396-59089415 MS.gene067243:intron 25.0%
!! AAAATTTTATGCGTAGTTGT+GGG - chr8.1:59085858-59085877 MS.gene067243:intron 25.0%
!! AATTTTCGACATATTTATCG+TGG - chr8.1:59087082-59087101 MS.gene067243:CDS 25.0%
!! ACTAATACACATCTTTTGTA+GGG - chr8.1:59088764-59088783 MS.gene067243:intron 25.0%
!! ACTACGCATAAAATTTTAGA+AGG + chr8.1:59085855-59085874 None:intergenic 25.0%
!! ATGTATTCCTGATTTTATTC+GGG - chr8.1:59087665-59087684 MS.gene067243:CDS 25.0%
!! GAGGTTAGTTATTTCAAATT+TGG - chr8.1:59086037-59086056 MS.gene067243:intron 25.0%
!! GTTAGTTATTTCAAATTTGG+TGG - chr8.1:59086040-59086059 MS.gene067243:intron 25.0%
!! TAAAATTTTATGCGTAGTTG+TGG - chr8.1:59085857-59085876 MS.gene067243:intron 25.0%
!! TGTTTATGTCTTTGTTACTT+AGG + chr8.1:59089840-59089859 None:intergenic 25.0%
!! TTAGTTTCTTCTTCTTTTGA+GGG - chr8.1:59087744-59087763 MS.gene067243:intron 25.0%
!!! AATTTTAATCTCTCTCAGTA+GGG - chr8.1:59086156-59086175 MS.gene067243:intron 25.0%
!!! ATATATATATAATGGGTGAG+CGG - chr8.1:59087835-59087854 MS.gene067243:intron 25.0%
!!! ATATTTTTAGGGACCATTAT+GGG - chr8.1:59087691-59087710 MS.gene067243:CDS 25.0%
!!! CATCCTTATTTTGCTTTATA+AGG + chr8.1:59086795-59086814 None:intergenic 25.0%
!!! TAATTTTAATCTCTCTCAGT+AGG - chr8.1:59086155-59086174 MS.gene067243:intron 25.0%
!!! TTTAGTTTCTTCTTCTTTTG+AGG - chr8.1:59087743-59087762 MS.gene067243:intron 25.0%
!!! TTTTATTTCATTGCATTCCA+TGG - chr8.1:59088315-59088334 MS.gene067243:intron 25.0%
AAAAGTTAGGTAACCCATAA+TGG + chr8.1:59087707-59087726 None:intergenic 30.0%
AAAGTTCACCTTTAGATGAA+AGG - chr8.1:59089950-59089969 MS.gene067243:intron 30.0%
ACATCTTGAATTCATCTCTA+GGG - chr8.1:59086872-59086891 MS.gene067243:intron 30.0%
AGAATGGTGAAATTGGTATT+GGG - chr8.1:59088481-59088500 MS.gene067243:intron 30.0%
AGAGAGATACATACATTCAT+CGG + chr8.1:59086909-59086928 None:intergenic 30.0%
ATAAGCTAAAACAAACCAGA+TGG + chr8.1:59086493-59086512 None:intergenic 30.0%
ATATCCACTTTGTGATATTC+AGG + chr8.1:59089673-59089692 None:intergenic 30.0%
ATGAAGATATTGATCCCATT+AGG - chr8.1:59089221-59089240 MS.gene067243:intron 30.0%
TAAACCTGAATATCACAAAG+TGG - chr8.1:59089666-59089685 MS.gene067243:intron 30.0%
TAAGCTAAAACAAACCAGAT+GGG + chr8.1:59086492-59086511 None:intergenic 30.0%
TAATATAAATAAAAGGGGGG+GGG - chr8.1:59087212-59087231 MS.gene067243:intron 30.0%
TATACACACATATACGATGA+AGG + chr8.1:59086605-59086624 None:intergenic 30.0%
TATAGGTATGGTACAATAGT+TGG - chr8.1:59089196-59089215 MS.gene067243:intron 30.0%
TCAAGTCAAAACATTCAACT+TGG - chr8.1:59088561-59088580 MS.gene067243:intron 30.0%
TGAATATCACAAAGTGGATA+TGG - chr8.1:59089672-59089691 MS.gene067243:intron 30.0%
TTAGAAGGCAAATGATAGTT+AGG + chr8.1:59085840-59085859 None:intergenic 30.0%
! AGGTCAATCATAACTCTTTT+AGG + chr8.1:59087156-59087175 None:intergenic 30.0%
! CACTAATACACATCTTTTGT+AGG - chr8.1:59088763-59088782 MS.gene067243:intron 30.0%
! TGTATTCCTGATTTTATTCG+GGG - chr8.1:59087666-59087685 MS.gene067243:CDS 30.0%
! TTTTTGCACCTTTCATCTAA+AGG + chr8.1:59089961-59089980 None:intergenic 30.0%
!!! GATATTTTTAGGGACCATTA+TGG - chr8.1:59087690-59087709 MS.gene067243:CDS 30.0%
!!! TTTTGACTTGATGATAGTTG+AGG + chr8.1:59088552-59088571 None:intergenic 30.0%
AAAACTGGAGAAAAACACAC+TGG - chr8.1:59087410-59087429 MS.gene067243:CDS 35.0%
AAACATTCAACTTGGAGCAT+TGG - chr8.1:59088569-59088588 MS.gene067243:intron 35.0%
AAAGCATAAAACTGGGAGAA+TGG + chr8.1:59088084-59088103 None:intergenic 35.0%
AAATAACTAACCTCGAGCAA+TGG + chr8.1:59086031-59086050 None:intergenic 35.0%
AAATGCATTTCTGAATCCCA+TGG + chr8.1:59088335-59088354 None:intergenic 35.0%
AACTGAGTAGTCTTTCTCAA+TGG + chr8.1:59088835-59088854 None:intergenic 35.0%
AACTTCCAATAGAAACAGCA+TGG + chr8.1:59088605-59088624 None:intergenic 35.0%
AAGATATTGATCCCATTAGG+TGG - chr8.1:59089224-59089243 MS.gene067243:intron 35.0%
AAGCATAAAACTGGGAGAAT+GGG + chr8.1:59088083-59088102 None:intergenic 35.0%
AAGCTAAAACAAACCAGATG+GGG + chr8.1:59086491-59086510 None:intergenic 35.0%
AATATAAATAAAAGGGGGGG+GGG - chr8.1:59087213-59087232 MS.gene067243:intron 35.0%
AATCATTTGGTATCTCACCA+AGG + chr8.1:59088648-59088667 None:intergenic 35.0%
AATGCCCTTCAACATAATCT+TGG + chr8.1:59089455-59089474 None:intergenic 35.0%
AGGAGAGATAAGACATTCAA+TGG - chr8.1:59087368-59087387 MS.gene067243:CDS 35.0%
AGTTGAGCATGGAATGAAAA+TGG - chr8.1:59090073-59090092 MS.gene067243:CDS 35.0%
AGTTGTGGGTGTTCAATTAA+AGG - chr8.1:59085872-59085891 MS.gene067243:intron 35.0%
ATCATTTGGTATCTCACCAA+GGG + chr8.1:59088647-59088666 None:intergenic 35.0%
ATCTCCCAAGATTATGTTGA+AGG - chr8.1:59089447-59089466 MS.gene067243:CDS 35.0%
ATCTTTACACTGTTCAGACA+CGG - chr8.1:59087632-59087651 MS.gene067243:intron 35.0%
ATGCCCTTCAACATAATCTT+GGG + chr8.1:59089454-59089473 None:intergenic 35.0%
ATTGAGAAAGACTACTCAGT+TGG - chr8.1:59088834-59088853 MS.gene067243:CDS 35.0%
CTAATGTTGTCCAATGTCTA+CGG - chr8.1:59087490-59087509 MS.gene067243:intron 35.0%
GACATCTTGAATTCATCTCT+AGG - chr8.1:59086871-59086890 MS.gene067243:intron 35.0%
GAGAATGGTGAAATTGGTAT+TGG - chr8.1:59088480-59088499 MS.gene067243:intron 35.0%
GCAACAAGAATATGCATTAG+AGG - chr8.1:59086346-59086365 MS.gene067243:intron 35.0%
TAATGTTGTCCAATGTCTAC+GGG - chr8.1:59087491-59087510 MS.gene067243:intron 35.0%
TACATTATTTCCATTGCTCG+AGG - chr8.1:59086018-59086037 MS.gene067243:intron 35.0%
TAGTAAGTTGCTCACTTCAA+TGG - chr8.1:59086409-59086428 MS.gene067243:CDS 35.0%
TCAATGGAAACAAGTACACA+TGG - chr8.1:59086425-59086444 MS.gene067243:CDS 35.0%
TCTCCCAAGATTATGTTGAA+GGG - chr8.1:59089448-59089467 MS.gene067243:CDS 35.0%
TGACATTATGATCACCTTCT+TGG + chr8.1:59088897-59088916 None:intergenic 35.0%
TGAGTGAAGCAAATGTTGTA+TGG - chr8.1:59089896-59089915 MS.gene067243:CDS 35.0%
TGCATGACGAGTAGTTATAT+AGG + chr8.1:59087176-59087195 None:intergenic 35.0%
TTCAGAATGGAGATGTATCA+AGG - chr8.1:59089252-59089271 MS.gene067243:intron 35.0%
TTGGGATAAATAGTTGAGCA+TGG - chr8.1:59090062-59090081 MS.gene067243:CDS 35.0%
TTTAAAGGCTGAGATTTCAC+TGG + chr8.1:59087304-59087323 None:intergenic 35.0%
TTTCTTCTGAATCAAGAGTG+AGG + chr8.1:59087926-59087945 None:intergenic 35.0%
! GACTCAGCATAAGTTTTCAA+AGG + chr8.1:59088813-59088832 None:intergenic 35.0%
! GAGGCAATTTTGTGCATATA+TGG + chr8.1:59088533-59088552 None:intergenic 35.0%
! GTATTCCTGATTTTATTCGG+GGG - chr8.1:59087667-59087686 MS.gene067243:CDS 35.0%
! GTGAAATTGGTATTGGGATT+CGG - chr8.1:59088487-59088506 MS.gene067243:intron 35.0%
! TATTCCTGATTTTATTCGGG+GGG - chr8.1:59087668-59087687 MS.gene067243:CDS 35.0%
! TTATTCGGGGGGATATTTTT+AGG - chr8.1:59087679-59087698 MS.gene067243:CDS 35.0%
! TTTTAAACTCCCGTAGACAT+TGG + chr8.1:59087503-59087522 None:intergenic 35.0%
!! TATTCGGGGGGATATTTTTA+GGG - chr8.1:59087680-59087699 MS.gene067243:CDS 35.0%
AAAGTGGATATGGACTTGGA+AGG - chr8.1:59089682-59089701 MS.gene067243:intron 40.0%
ACAAAAACGCATGAATCTCC+AGG + chr8.1:59088272-59088291 None:intergenic 40.0%
AGAAAGACTACTCAGTTGGA+AGG - chr8.1:59088838-59088857 MS.gene067243:CDS 40.0%
AGAGCACACTTGCTTACTAA+TGG - chr8.1:59088212-59088231 MS.gene067243:intron 40.0%
AGCTAAAACAAACCAGATGG+GGG + chr8.1:59086490-59086509 None:intergenic 40.0%
AGGACATGCATGGAATTGAA+TGG - chr8.1:59087059-59087078 MS.gene067243:CDS 40.0%
ATAATCTTGGGAGATCCCAA+AGG + chr8.1:59089442-59089461 None:intergenic 40.0%
ATACATCTCCATTCTGAACC+AGG + chr8.1:59089250-59089269 None:intergenic 40.0%
ATATAAATAAAAGGGGGGGG+GGG - chr8.1:59087214-59087233 MS.gene067243:intron 40.0%
ATATCCCCCCGAATAAAATC+AGG + chr8.1:59087675-59087694 None:intergenic 40.0%
ATATTGAGAGGGTTTGTCCA+TGG - chr8.1:59089407-59089426 MS.gene067243:intron 40.0%
ATGGAAACAAGTACACATGG+TGG - chr8.1:59086428-59086447 MS.gene067243:CDS 40.0%
CACACTTGCTTACTAATGGT+TGG - chr8.1:59088216-59088235 MS.gene067243:intron 40.0%
GATTCTACACTGCAGAAAAC+TGG - chr8.1:59087395-59087414 MS.gene067243:CDS 40.0%
GGACAAACCCTCTCAATATT+TGG + chr8.1:59089406-59089425 None:intergenic 40.0%
GTGTCTGAACAGTGTAAAGA+TGG + chr8.1:59087633-59087652 None:intergenic 40.0%
TCACAAAGTGGATATGGACT+TGG - chr8.1:59089678-59089697 MS.gene067243:intron 40.0%
TGTTATTGTAGGGGAGAGAA+TGG - chr8.1:59088465-59088484 MS.gene067243:intron 40.0%
! AACTCTAAAAGCCTTCTTCC+TGG - chr8.1:59088251-59088270 MS.gene067243:intron 40.0%
! AGAGAATCCTTTCCCGTTTT+GGG - chr8.1:59087433-59087452 MS.gene067243:CDS 40.0%
! AGAGGATTTGAGTTCCTTAG+AGG - chr8.1:59087859-59087878 MS.gene067243:intron 40.0%
! ATCTTGCATTGGTGGTTGAA+GGG + chr8.1:59087029-59087048 None:intergenic 40.0%
! CAGATGTTGTCTGAAGTTGA+AGG - chr8.1:59088867-59088886 MS.gene067243:CDS 40.0%
! CATCTATCTGCATGTTGCTT+TGG + chr8.1:59086464-59086483 None:intergenic 40.0%
! GAGATTCATGCGTTTTTGTC+AGG - chr8.1:59088273-59088292 MS.gene067243:intron 40.0%
! TTTGAGTTCCTTAGAGGTGA+CGG - chr8.1:59087865-59087884 MS.gene067243:intron 40.0%
!! CTTCTTTTGAGGGTTCGTTT+TGG - chr8.1:59087754-59087773 MS.gene067243:intron 40.0%
!! GTTGTCCATGCTGTTTCTAT+TGG - chr8.1:59088597-59088616 MS.gene067243:intron 40.0%
AAGACTACTCAGTTGGAAGG+AGG - chr8.1:59088841-59088860 MS.gene067243:CDS 45.0%
AAGTTGAAGGACGTCCAAGA+AGG - chr8.1:59088880-59088899 MS.gene067243:CDS 45.0%
AATGCAAGATCTTGTGGCGA+AGG - chr8.1:59087039-59087058 MS.gene067243:CDS 45.0%
ACATCTCCTCTTAGGTGCAA+TGG - chr8.1:59089371-59089390 MS.gene067243:intron 45.0%
ACCACCAATGCAAGATCTTG+TGG - chr8.1:59087033-59087052 MS.gene067243:CDS 45.0%
AGACTACTCAGTTGGAAGGA+GGG - chr8.1:59088842-59088861 MS.gene067243:CDS 45.0%
AGGGGAGAGAATGGTGAAAT+TGG - chr8.1:59088474-59088493 MS.gene067243:intron 45.0%
ATTTGGTATCTCACCAAGGG+TGG + chr8.1:59088644-59088663 None:intergenic 45.0%
CATACCATCAACCCCAAAAC+GGG + chr8.1:59087448-59087467 None:intergenic 45.0%
CATCTCCTCTTAGGTGCAAT+GGG - chr8.1:59089372-59089391 MS.gene067243:intron 45.0%
CCATACCATCAACCCCAAAA+CGG + chr8.1:59087449-59087468 None:intergenic 45.0%
GAAATCCCATTGCACCTAAG+AGG + chr8.1:59089380-59089399 None:intergenic 45.0%
GAAGGTCAACAATACAGTGC+TGG - chr8.1:59089700-59089719 MS.gene067243:intron 45.0%
GAGGACAATCATGCACTTCA+TGG - chr8.1:59086365-59086384 MS.gene067243:intron 45.0%
TACACTGTTCAGACACGGTT+TGG - chr8.1:59087637-59087656 MS.gene067243:intron 45.0%
TATAAATAAAAGGGGGGGGG+GGG - chr8.1:59087215-59087234 MS.gene067243:intron 45.0%
TATCTCACCAAGGGTGGTAT+TGG + chr8.1:59088638-59088657 None:intergenic 45.0%
TTCACTGGACTCTACAGTGA+CGG + chr8.1:59087289-59087308 None:intergenic 45.0%
TTCGCCACAAGATCTTGCAT+TGG + chr8.1:59087040-59087059 None:intergenic 45.0%
! GAGAATCCTTTCCCGTTTTG+GGG - chr8.1:59087434-59087453 MS.gene067243:CDS 45.0%
! GAGAGAATCCTTTCCCGTTT+TGG - chr8.1:59087432-59087451 MS.gene067243:CDS 45.0%
! GATCTTGCATTGGTGGTTGA+AGG + chr8.1:59087030-59087049 None:intergenic 45.0%
!! TTGGGGTTGATGGTATGGTT+TGG - chr8.1:59087451-59087470 MS.gene067243:intron 45.0%
!! AAAAAAAAATGAATATAATT+TGG - chr8.1:59086303-59086322 MS.gene067243:intron 5.0%
!! AAAAAAAATGAATATAATTT+GGG - chr8.1:59086304-59086323 MS.gene067243:intron 5.0%
!!! TTTTCTTTAAAAAAATTTAA+TGG + chr8.1:59088023-59088042 None:intergenic 5.0%
AGATAGATGCTTCCCCCATC+TGG - chr8.1:59086475-59086494 MS.gene067243:CDS 50.0%
ATAAATAAAAGGGGGGGGGG+GGG - chr8.1:59087216-59087235 MS.gene067243:intron 50.0%
ATTGATCCCATTAGGTGGCC+TGG - chr8.1:59089229-59089248 MS.gene067243:intron 50.0%
CATCAACCCCAAAACGGGAA+AGG + chr8.1:59087443-59087462 None:intergenic 50.0%
CGCATGAATCTCCAGGAAGA+AGG + chr8.1:59088265-59088284 None:intergenic 50.0%
GCCACAAGATCTTGCATTGG+TGG + chr8.1:59087037-59087056 None:intergenic 50.0%
GGAAGACATCAAAGAGCCGT+TGG + chr8.1:59087905-59087924 None:intergenic 50.0%
TCCATGTCCAATACCACCCT+TGG - chr8.1:59088628-59088647 MS.gene067243:intron 50.0%
TCTGAACCAGGCCACCTAAT+GGG + chr8.1:59089238-59089257 None:intergenic 50.0%
TTAGGTGGCCTGGTTCAGAA+TGG - chr8.1:59089239-59089258 MS.gene067243:intron 50.0%
TTCTGAACCAGGCCACCTAA+TGG + chr8.1:59089239-59089258 None:intergenic 50.0%
TTGAGAGGGTTTGTCCATGG+TGG - chr8.1:59089410-59089429 MS.gene067243:intron 50.0%
! ACCAAGGGTGGTATTGGACA+TGG + chr8.1:59088632-59088651 None:intergenic 50.0%
! ACTGTTCAGACACGGTTTGG+CGG - chr8.1:59087640-59087659 MS.gene067243:CDS 50.0%
! TTAGAGGTGACGGCCTAGTT+GGG - chr8.1:59087875-59087894 MS.gene067243:intron 50.0%
!! ATATAATGGGTGAGCGGCAG+AGG - chr8.1:59087841-59087860 MS.gene067243:intron 50.0%
!! CCATGGTGGATTGAGCCTTT+GGG - chr8.1:59089424-59089443 MS.gene067243:intron 50.0%
!! TCCATGGTGGATTGAGCCTT+TGG - chr8.1:59089423-59089442 MS.gene067243:intron 50.0%
!!! CCGTTTTGGGGTTGATGGTA+TGG - chr8.1:59087446-59087465 MS.gene067243:intron 50.0%
!!! CTTTCCCGTTTTGGGGTTGA+TGG - chr8.1:59087441-59087460 MS.gene067243:intron 50.0%
AGCCGTTGGACATCCCAACT+AGG + chr8.1:59087891-59087910 None:intergenic 55.0%
CAACTAGGCCGTCACCTCTA+AGG + chr8.1:59087876-59087895 None:intergenic 55.0%
CCCAAAGGCTCAATCCACCA+TGG + chr8.1:59089427-59089446 None:intergenic 55.0%
CTTGTGGCGAAGGACATGCA+TGG - chr8.1:59087049-59087068 MS.gene067243:CDS 55.0%
GGCCTAGTTGGGATGTCCAA+CGG - chr8.1:59087886-59087905 MS.gene067243:intron 55.0%
TAAATAAAAGGGGGGGGGGG+GGG - chr8.1:59087217-59087236 MS.gene067243:intron 55.0%
! CTTAGAGGTGACGGCCTAGT+TGG - chr8.1:59087874-59087893 MS.gene067243:intron 55.0%
AAATAAAAGGGGGGGGGGGG+GGG - chr8.1:59087218-59087237 MS.gene067243:intron 60.0%
GGACTCTACAGTGACGGCAG+AGG + chr8.1:59087283-59087302 None:intergenic 60.0%
AATAAAAGGGGGGGGGGGGG+GGG - chr8.1:59087219-59087238 MS.gene067243:intron 65.0%
!!! GGGGGTGTTTTGGGGGGGAA+TGG - chr8.1:59087255-59087274 MS.gene067243:intron 65.0%
ATAAAAGGGGGGGGGGGGGG+GGG - chr8.1:59087220-59087239 MS.gene067243:intron 70.0%
TAAAAGGGGGGGGGGGGGGG+GGG - chr8.1:59087221-59087240 MS.gene067243:intron 75.0%
!!! GGGGGGGGGGGGGGTGTTTT+GGG - chr8.1:59087246-59087265 MS.gene067243:intron 75.0%
!!! GGGGGGGGGGGGGTGTTTTG+GGG - chr8.1:59087247-59087266 MS.gene067243:intron 75.0%
!!! GGGGGGGGGGGGTGTTTTGG+GGG - chr8.1:59087248-59087267 MS.gene067243:intron 75.0%
!!! GGGGGGGGGGGTGTTTTGGG+GGG - chr8.1:59087249-59087268 MS.gene067243:intron 75.0%
!!! GGGGGGGGGGTGTTTTGGGG+GGG - chr8.1:59087250-59087269 MS.gene067243:intron 75.0%
! AAAAGGGGGGGGGGGGGGGG+GGG - chr8.1:59087222-59087241 MS.gene067243:intron 80.0%
!!! GGGGGGGGGGGGGGGTGTTT+TGG - chr8.1:59087245-59087264 MS.gene067243:intron 80.0%
! AAAGGGGGGGGGGGGGGGGG+GGG - chr8.1:59087223-59087242 MS.gene067243:intron 85.0%
! AAGGGGGGGGGGGGGGGGGG+GGG - chr8.1:59087224-59087243 MS.gene067243:intron 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr8.1:59087225-59087244 MS.gene067243:intron 95.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 59085828 59090106 59085828 ID=MS.gene067243
chr8.1 mRNA 59085828 59090106 59085828 ID=MS.gene067243.t1;Parent=MS.gene067243
chr8.1 exon 59090041 59090106 59090041 ID=MS.gene067243.t1.exon1;Parent=MS.gene067243.t1
chr8.1 CDS 59090041 59090106 59090041 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59089895 59089951 59089895 ID=MS.gene067243.t1.exon2;Parent=MS.gene067243.t1
chr8.1 CDS 59089895 59089951 59089895 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59089438 59089587 59089438 ID=MS.gene067243.t1.exon3;Parent=MS.gene067243.t1
chr8.1 CDS 59089438 59089587 59089438 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59088831 59088915 59088831 ID=MS.gene067243.t1.exon4;Parent=MS.gene067243.t1
chr8.1 CDS 59088831 59088915 59088831 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59087640 59087730 59087640 ID=MS.gene067243.t1.exon5;Parent=MS.gene067243.t1
chr8.1 CDS 59087640 59087730 59087640 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59087285 59087458 59087285 ID=MS.gene067243.t1.exon6;Parent=MS.gene067243.t1
chr8.1 CDS 59087285 59087458 59087285 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59087033 59087149 59087033 ID=MS.gene067243.t1.exon7;Parent=MS.gene067243.t1
chr8.1 CDS 59087033 59087149 59087033 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59086661 59086733 59086661 ID=MS.gene067243.t1.exon8;Parent=MS.gene067243.t1
chr8.1 CDS 59086661 59086733 59086661 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59086408 59086549 59086408 ID=MS.gene067243.t1.exon9;Parent=MS.gene067243.t1
chr8.1 CDS 59086408 59086549 59086408 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59086231 59086287 59086231 ID=MS.gene067243.t1.exon10;Parent=MS.gene067243.t1
chr8.1 CDS 59086231 59086287 59086231 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
chr8.1 exon 59085828 59085859 59085828 ID=MS.gene067243.t1.exon11;Parent=MS.gene067243.t1
chr8.1 CDS 59085828 59085859 59085828 ID=cds.MS.gene067243.t1;Parent=MS.gene067243.t1
Gene Sequence

>MS.gene067243

ATGGAAATTCCTAACTATCATTTGCCTTCTAAAATTTTATGCGTAGTTGTGGGTGTTCAATTAAAGGTATTGTCATCTTTCTATAAGTTTATTGTTTTTATTAACTTAAAATGTTTAATGCGTATTGTAAATAATATACTTATTTGGTATTGTAGGTAAAAGTTGACACAGATGAGATTTTTTCTCTAGTTACATTATTTCCATTGCTCGAGGTTAGTTATTTCAAATTTGGTGGTAAATATATTTTTAGTGTCTATAGATATTCTTTTTTTTTCTCTATCTTAAATAAAACATGAGATTTTAGTCCATACTTTTTATAAAAACGATTAATTTTAATCTCTCTCAGTAGGGACTCAAACCACATGTTTTTATAAAATATATGACTCAAATTTTATATAGAGACTCAATTTGAAAGATCCATAATTTTATTTAAATTAAAAACATTTAACTCTTCTAATATCGTGTGTGTAAAGATAAAAAAAAATGAATATAATTTGGGTTATTACTGGATGATTGCAGCAACAAGAATATGCATTAGAGGACAATCATGCACTTCATGGTCCTAATGAAATCTACTCTTTTAGTAAGTTGCTCACTTCAATGGAAACAAGTACACATGGTGGACTTTATATTCCAAAGCAACATGCAGATAGATGCTTCCCCCATCTGGTTTGTTTTAGCTTATGCTTGTGATTCTTTATTGCCTTTGATAATGTTATTGTATATTTTCTTTGATTAACATGACATAATTTTCAATTGTCAATGTCATTCTATCCTTCATCGTATATGTGTGTATATATAAGGTTAAATATATTTTTAGTCCCTGTAGAATTACAATTTTTTTGTTAACACTTGTATAAGTTTAATTCAAATTTTGTCCTCGCATATTTTTATGAATTTATACAAGAAAAATTATTTTAGTACTTGAAATTGTTTTCTTAAACAACAAATGTTAGTATTTAGTCCTTATAAAGCAAAATAAGGATGAAAGTTGTACAAACTTTATATCGAGACCAAACATCAAAAATCATAAATTCTATACGGACATCTTGAATTCATCTCTAGGGACATATTGAAACCGATGAATGTATGTATCTCTCTACACTTGTGTAAATGTTTTTACCAAAAATTTGTCGTTTATTTTTTTTAAGAATTCTGTTTTAGTTTCATGTCTTTGTTACATTGTTATAGGATATGACCCTTCAACCACCAATGCAAGATCTTGTGGCGAAGGACATGCATGGAATTGAATGGAATTTTCGACATATTTATCGTGGTAAGTTTAAGTTGTTTTATTTAAACATTAATATTAACTTCATTGTTAACCTAAAAGAGTTATGATTGACCTATATAACTACTCGTCATGCACAAAATCATCTCTGTTTAATATAAATAAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTGGGGGGGAATGGATCCTCTGCCGTCACTGTAGAGTCCAGTGAAATCTCAGCCTTTAAAGAAAAATTAATGCTTAAAAATATAAATGTTGAAAATTTAAAACTAGGAGAGATAAGACATTCAATGGTATAGATTCTACACTGCAGAAAACTGGAGAAAAACACACTGGAGAGAATCCTTTCCCGTTTTGGGGTTGATGGTATGGTTTGGTGATAATTGAGTCTTTCTAATGTTGTCCAATGTCTACGGGAGTTTAAAACTTAAAACGACTTAATTGGTATGGAAAAAAAAACTTAAAGAACTAACTTGTTACAATTAATTAACTTAAAGACCTAAATGGTACAAAAAAAACTAAGGTTGATCTAACCATCTTTACACTGTTCAGACACGGTTTGGCGGAAATGTATTCCTGATTTTATTCGGGGGGATATTTTTAGGGACCATTATGGGTTACCTAACTTTTATTTTCCGTATTTTATTTTAGTTTCTTCTTCTTTTGAGGGTTCGTTTTGGCCCCCTCTTATACATATTTTTCTCTTTTTTCTATATATATATATATATATATATATATATATATATATAATGGGTGAGCGGCAGAGGATTTGAGTTCCTTAGAGGTGACGGCCTAGTTGGGATGTCCAACGGCTCTTTGATGTCTTCCTCACTCTTGATTCAGAAGAAAAAAAAGTACAAAAAAACTTAAAAGGACAAATTTGTTATAATTAAATAACTTAAAGGACCTTTGATGTAATTTAGCCATTAAATTTTTTTAAAGAAAATTGTAAAATGATCGTAGTGTCACTGTAATAAAAATTGCCCATTCTCCCAGTTTTATGCTTTTTTTTTCTCTCCCAAAATACAACTATTTTATTTCAAGAATGGAATCATTATTTATTTATTTTTCTTTCTAAGTTATATATTCTTATAACATGAAATGCAGATGATGAGAGAGCACACTTGCTTACTAATGGTTGGAGCACATTTGTCAACTCTAAAAGCCTTCTTCCTGGAGATTCATGCGTTTTTGTCAGGTTCTCTCTTTTTTCTTCATTTTTATTTCATTGCATTCCATGGGATTCAGAAATGCATTTCAATCTATAAATTCTATTGTGATTGACAATTTATGCATCTACCAATAACATTATTATTCATTTTGTACACATTAATTTTATGTCATAGAAATTTACGTGGACAATTCTTATGTTATTGTAGGGGAGAGAATGGTGAAATTGGTATTGGGATTCGGCGAGCAATGAATCAACATAGCCATATATGCACAAAATTGCCTCAACTATCATCAAGTCAAAACATTCAACTTGGAGCATTGGCTGCTGTTGTCCATGCTGTTTCTATTGGAAGTTTGTTCCATGTCCAATACCACCCTTGGTGAGATACCAAATGATTTTACAATTTGAAATATAAATGAACATATTTTTTTTTCAAACATTGCAAATTTGTAAATATATGCTCTTTGAGAATCTATTTTGAAAGAATGTTAGCACTAATACACATCTTTTGTAGGGTTACTCCCTTTGAATTTATGATTCCTTTGAAAACTTATGCTGAGTCCATTGAGAAAGACTACTCAGTTGGAAGGAGGGTACAGATGTTGTCTGAAGTTGAAGGACGTCCAAGAAGGTGATCATAATGTCAAATTACTATGGTTAATTCATGATTGTTTTATCACTTTTATGAGAAGTGCGAATAATATACGTTTTAACATAGATTTTTCAATATTCGTCTTTCTGTCAGTTAGTCAGACCCATATGAATTTTAGTAAATACATAGACGTAATAAAAAGAGTGTATTGCTAGCATTATTCGTGTTTTGATTTGAAATATATGCATCTATGACAAAACTGTTTATGATACTTATAGTCTATAAAGGTAACTATTTGTAATAATTTTGTATTTTTACATTTTTGTTTTACTTTATAGGTATGGTACAATAGTTGGTAATGAAGATATTGATCCCATTAGGTGGCCTGGTTCAGAATGGAGATGTATCAAGGTAAAATCAAATATCTTACTATGCTTTAGAATTAGTACCATGATGTTTTAGTTGATACATTTTTCTTTGAACTTGATTGATTTAAATAAATTTAATTACATCTCCTCTTAGGTGCAATGGGATTTCATACCAAATATTGAGAGGGTTTGTCCATGGTGGATTGAGCCTTTGGGATCTCCCAAGATTATGTTGAAGGGCATTCCAATTCTCCCTTTATCAAATAAAACAGATATACTTAACTTTTTTAACGAGGGTTAGTTATTATTCTTTCATTTCTTAAATTTTAGATGTTTTGATATTAATTTTACGTTTTTGCTAATATGTTGTGTTTACTATGATCATTGTGTTGATTGAATTCTCTTATTGTTATCAGATATAGCTGGGAGTTCTTCTAAACCTGAATATCACAAAGTGGATATGGACTTGGAAGGTCAACAATACAGTGCTGGAAATGATGAAAAGTCAAACTTTTTCATCATTGCTTTCTTTATATGTCTTTGCTTTTTTACATTTGTAATTTTTCTCTTTCGTCCTCTTCTATAATTATTTCAATAAAAAAATAACCTAAGTAACAAAGACATAAACAACTGAGTGAACAAACTTGAACTAGTTCTATGTTGCATGAGTGAAGCAAATGTTGTATGGTGCATAAGTTTGTTTCTATCGATATATTAATAAAGTTCACCTTTAGATGAAAGGTGCAAAAAAACAAAATTATGTTTGATCATACTCGACTATTTTCATATTCTTTTTCAAATCTTTTTATTTTATCTTAGTATCTTTCTATGTTGGGATAAATAGTTGAGCATGGAATGAAAATGGAGAGAGAGTGA
Protein sequence

>MS.gene067243.t1

MEIPNYHLPSKILCVVVGVQLKVKVDTDEIFSLVTLFPLLEQQEYALEDNHALHGPNEIYSFSKLLTSMETSTHGGLYIPKQHADRCFPHLDMTLQPPMQDLVAKDMHGIEWNFRHIYRDDERAHLLTNGWSTFVNSKSLLPGDSCVFVRGENGEIGIGIRRAMNQHSHICTKLPQLSSSQNIQLGALAAVVHAVSIGSLFHVQYHPWVTPFEFMIPLKTYAESIEKDYSVGRRVQMLSEVEGRPRRYGTIVGNEDIDPIRWPGSEWRCIKVQWDFIPNIERVCPWWIEPLGSPKIMLKGIPILPLSNKTDILNFFNEDIAGSSSKPEYHKVDMDLEVEHGMKMERE