AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067262

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067262.t1 MTR_8g046350 90.964 166 12 1 1 166 1 163 2.11e-106 301
MS.gene067262.t1 MTR_8g051580 62.147 177 64 1 1 174 1 177 1.24e-74 222
MS.gene067262.t1 MTR_1g047550 56.571 175 73 1 1 172 1 175 7.13e-66 199
MS.gene067262.t1 MTR_4g131030 53.191 188 68 1 1 168 1 188 4.43e-65 199
MS.gene067262.t1 MTR_8g079502 58.084 167 67 1 1 164 1 167 1.52e-63 194
MS.gene067262.t1 MTR_1g063160 53.714 175 78 1 1 172 1 175 6.09e-61 187
MS.gene067262.t1 MTR_1g054265 51.786 168 78 1 1 165 1 168 2.93e-56 175
MS.gene067262.t1 MTR_4g094632 37.037 162 91 2 1 161 1 152 1.05e-29 107
MS.gene067262.t1 MTR_3g052920 57.895 76 32 0 2 77 9 84 1.46e-25 98.6
MS.gene067262.t1 MTR_1g106070 55.844 77 34 0 2 78 9 85 2.19e-25 96.7
MS.gene067262.t1 MTR_3g052870 57.143 77 33 0 2 78 9 85 2.55e-25 97.4
MS.gene067262.t1 MTR_1g105920 57.143 77 33 0 2 78 9 85 5.38e-25 97.1
MS.gene067262.t1 MTR_5g045560 53.846 78 36 0 1 78 8 85 6.38e-25 96.7
MS.gene067262.t1 MTR_2g093190 38.095 147 65 1 2 122 9 155 1.15e-24 95.9
MS.gene067262.t1 MTR_1g108580 37.415 147 66 1 2 122 9 155 1.15e-24 95.9
MS.gene067262.t1 MTR_3g080940 44.538 119 58 3 1 114 8 123 1.27e-24 95.5
MS.gene067262.t1 MTR_5g055100 55.844 77 34 0 2 78 9 85 1.52e-24 95.9
MS.gene067262.t1 MTR_1g077360 57.143 77 33 0 2 78 9 85 2.78e-24 95.1
MS.gene067262.t1 MTR_2g030740 55.844 77 34 0 2 78 9 85 4.92e-24 94.4
MS.gene067262.t1 MTR_3g030770 37.415 147 66 1 2 122 9 155 5.57e-24 94.4
MS.gene067262.t1 MTR_1g108510 37.415 147 66 1 2 122 9 155 7.99e-24 93.6
MS.gene067262.t1 MTR_2g105290 37.313 134 78 3 1 133 11 139 9.42e-24 92.4
MS.gene067262.t1 MTR_1g105910 55.844 77 34 0 2 78 9 85 1.01e-23 93.6
MS.gene067262.t1 MTR_1g075600 55.844 77 34 0 2 78 9 85 1.66e-23 93.2
MS.gene067262.t1 MTR_4g094638 51.316 76 37 0 1 76 1 76 1.84e-23 91.7
MS.gene067262.t1 MTR_8g043650 54.545 77 35 0 2 78 9 85 2.43e-23 92.8
MS.gene067262.t1 MTR_8g086290 37.956 137 77 4 2 136 12 142 3.48e-23 90.9
MS.gene067262.t1 MTR_5g053390 49.451 91 42 2 2 91 9 96 8.91e-23 91.3
MS.gene067262.t1 MTR_1g012570 53.247 77 36 0 2 78 9 85 1.25e-22 90.9
MS.gene067262.t1 MTR_3g030780 51.948 77 37 0 2 78 9 85 2.99e-22 87.0
MS.gene067262.t1 MTR_2g085280 53.247 77 36 0 2 78 9 85 3.86e-22 89.7
MS.gene067262.t1 MTR_2g085250 53.247 77 36 0 2 78 9 85 4.20e-22 89.4
MS.gene067262.t1 MTR_7g028448 37.607 117 61 3 17 133 27 131 7.49e-22 87.0
MS.gene067262.t1 MTR_4g036915 37.607 117 61 3 17 133 27 131 7.49e-22 87.0
MS.gene067262.t1 MTR_0121s0080 35.714 154 84 2 2 140 9 162 9.46e-22 88.6
MS.gene067262.t1 MTR_0121s0100 50.649 77 38 0 2 78 9 85 1.70e-20 82.4
MS.gene067262.t1 MTR_1g105905 60.656 61 24 0 18 78 8 68 8.05e-20 83.2
MS.gene067262.t1 MTR_5g021270 32.639 144 63 3 1 144 1 110 1.01e-19 83.2
MS.gene067262.t1 MTR_5g021270 32.639 144 63 3 1 144 1 110 1.15e-19 82.8
MS.gene067262.t1 MTR_0003s0590 52.174 69 33 0 1 69 1 69 4.90e-19 81.6
MS.gene067262.t1 MTR_5g066180 48.611 72 37 0 1 72 1 72 4.35e-18 78.6
MS.gene067262.t1 MTR_7g062350 55.556 63 28 0 16 78 35 97 7.75e-18 78.2
MS.gene067262.t1 MTR_4g127140 47.436 78 41 0 1 78 11 88 2.11e-17 75.9
MS.gene067262.t1 MTR_5g066960 55.000 60 27 0 1 60 1 60 7.34e-17 71.2
MS.gene067262.t1 MTR_1g053070 44.444 81 45 0 1 81 1 81 7.96e-17 75.5
MS.gene067262.t1 MTR_3g452380 49.275 69 35 0 1 69 16 84 8.22e-17 75.5
MS.gene067262.t1 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.17e-16 75.1
MS.gene067262.t1 MTR_5g031000 47.826 69 36 0 1 69 1 69 1.42e-16 74.7
MS.gene067262.t1 MTR_2g009890 39.535 86 52 0 1 86 1 86 1.94e-16 75.1
MS.gene067262.t1 MTR_8g033270 46.377 69 37 0 1 69 1 69 2.49e-16 74.3
MS.gene067262.t1 MTR_3g109930 32.432 148 92 4 17 159 17 161 3.37e-16 72.4
MS.gene067262.t1 MTR_3g005530 44.928 69 38 0 1 69 1 69 3.58e-16 73.6
MS.gene067262.t1 MTR_3g067910 50.820 61 30 0 18 78 6 66 4.33e-16 70.5
MS.gene067262.t1 MTR_3g113030 28.402 169 100 2 1 148 1 169 5.82e-16 73.2
MS.gene067262.t1 MTR_8g087860 33.945 109 72 0 1 109 17 125 5.83e-16 73.2
MS.gene067262.t1 MTR_3g067875 58.333 48 20 0 18 65 8 55 6.59e-16 68.9
MS.gene067262.t1 MTR_4g093970 38.393 112 66 2 1 112 27 135 8.82e-16 72.8
MS.gene067262.t1 MTR_5g032150 42.857 84 47 1 1 84 1 83 1.61e-15 71.6
MS.gene067262.t1 MTR_8g033220 35.922 103 63 2 1 101 1 102 1.77e-15 71.6
MS.gene067262.t1 MTR_1g108500 57.377 61 23 1 4 64 102 159 1.81e-15 72.8
MS.gene067262.t1 MTR_5g032520 42.857 84 47 1 1 84 1 83 2.04e-15 71.6
MS.gene067262.t1 MTR_8g033220 35.922 103 63 2 1 101 1 102 2.11e-15 71.6
MS.gene067262.t1 MTR_4g093030 39.362 94 55 1 1 92 1 94 2.12e-15 70.1
MS.gene067262.t1 MTR_2g017865 44.928 69 38 0 1 69 16 84 3.95e-15 71.2
MS.gene067262.t1 MTR_1g038300 46.479 71 36 1 1 69 1 71 4.89e-15 70.5
MS.gene067262.t1 MTR_7g075870 51.724 58 28 0 1 58 1 58 7.02e-15 69.7
MS.gene067262.t1 MTR_7g075870 51.724 58 28 0 1 58 1 58 7.13e-15 69.7
MS.gene067262.t1 MTR_4g102530 43.478 69 39 0 1 69 1 69 9.80e-15 69.3
MS.gene067262.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.37e-14 68.6
MS.gene067262.t1 MTR_2g461710 49.123 57 29 0 1 57 1 57 1.40e-14 65.1
MS.gene067262.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.43e-14 68.9
MS.gene067262.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.65e-14 68.2
MS.gene067262.t1 MTR_4g036050 44.444 72 39 1 1 71 1 72 1.68e-14 68.2
MS.gene067262.t1 MTR_1g101970 43.662 71 40 0 1 71 1 71 2.16e-14 68.2
MS.gene067262.t1 MTR_7g016600 50.877 57 28 0 1 57 1 57 2.74e-14 68.9
MS.gene067262.t1 MTR_4g084740 46.479 71 37 1 1 70 1 71 3.04e-14 69.7
MS.gene067262.t1 MTR_5g046870 50.877 57 28 0 1 57 1 57 3.72e-14 65.5
MS.gene067262.t1 MTR_1g029670 33.557 149 77 5 1 144 1 132 5.15e-14 67.0
MS.gene067262.t1 MTR_4g109830 36.170 94 47 2 1 81 1 94 5.28e-14 67.8
MS.gene067262.t1 MTR_8g066260 41.667 72 39 1 1 72 1 69 7.47e-14 67.4
MS.gene067262.t1 MTR_3g084980 52.632 57 27 0 1 57 1 57 7.68e-14 67.4
MS.gene067262.t1 MTR_3g088615 41.538 65 38 0 1 65 1 65 1.05e-13 66.2
MS.gene067262.t1 MTR_8g097090 50.877 57 28 0 1 57 1 57 1.20e-13 67.0
MS.gene067262.t1 MTR_6g015975 50.877 57 28 0 1 57 1 57 1.26e-13 67.0
MS.gene067262.t1 MTR_5g046790 45.614 57 31 0 1 57 1 57 1.44e-13 66.2
MS.gene067262.t1 MTR_7g016630 38.356 73 44 1 1 72 1 73 1.66e-13 66.6
MS.gene067262.t1 MTR_4g109810 49.123 57 29 0 1 57 1 57 1.89e-13 66.2
MS.gene067262.t1 MTR_8g022970 36.782 87 52 1 20 103 36 122 2.15e-13 65.5
MS.gene067262.t1 MTR_3g102570 42.254 71 40 1 1 70 1 71 2.70e-13 66.6
MS.gene067262.t1 MTR_7g075850 52.632 57 27 0 1 57 1 57 4.08e-13 65.5
MS.gene067262.t1 MTR_3g437790 31.724 145 71 6 19 150 30 159 1.16e-12 63.5
MS.gene067262.t1 MTR_6g464720 40.278 72 42 1 1 71 1 72 1.73e-12 63.9
MS.gene067262.t1 MTR_1g041615 60.870 46 18 0 13 58 17 62 2.23e-12 61.6
MS.gene067262.t1 MTR_5g041650 50.000 54 27 0 1 54 38 91 3.38e-12 63.9
MS.gene067262.t1 MTR_3g067870 52.083 48 23 0 18 65 92 139 4.32e-12 61.2
MS.gene067262.t1 MTR_4g108720 30.075 133 66 2 1 106 1 133 2.19e-11 61.6
MS.gene067262.t1 MTR_4g051538 30.435 92 60 2 19 108 26 115 6.01e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067262.t1 AT2G34440 38.596 171 92 2 1 158 1 171 3.04e-35 121
MS.gene067262.t1 AT3G66656 48.819 127 59 2 1 121 1 127 2.44e-31 112
MS.gene067262.t1 AT5G60440 45.070 142 67 4 2 136 7 144 2.19e-29 110
MS.gene067262.t1 AT2G24840 40.278 144 80 3 1 141 62 202 9.84e-29 107
MS.gene067262.t1 AT4G36590 37.952 166 78 5 2 157 7 157 4.92e-24 94.7
MS.gene067262.t1 AT1G01530 39.130 161 84 3 1 147 6 166 1.94e-23 93.2
MS.gene067262.t1 AT1G65360 39.568 139 77 3 1 136 6 140 1.20e-21 88.2
MS.gene067262.t1 AT1G47760 32.298 161 99 3 1 154 1 158 4.46e-20 82.8
MS.gene067262.t1 AT3G61120 42.045 88 49 1 1 86 1 88 2.32e-19 82.4
MS.gene067262.t1 AT1G72350 39.669 121 66 3 2 122 43 156 4.43e-19 81.3
MS.gene067262.t1 AT5G13790 37.705 122 54 1 1 122 1 100 1.55e-18 80.5
MS.gene067262.t1 AT4G24540 41.176 85 50 0 1 85 1 85 1.58e-18 79.7
MS.gene067262.t1 AT5G65070 38.333 120 68 5 1 116 1 118 2.24e-18 77.4
MS.gene067262.t1 AT5G13790 49.275 69 35 0 1 69 1 69 3.65e-18 79.7
MS.gene067262.t1 AT3G57390 50.725 69 34 0 1 69 1 69 6.31e-18 78.2
MS.gene067262.t1 AT1G28460 46.377 69 37 0 2 70 8 76 7.03e-18 77.0
MS.gene067262.t1 AT1G29962 45.833 72 39 0 2 73 8 79 7.80e-18 77.0
MS.gene067262.t1 AT5G65070 36.879 141 80 6 1 134 1 139 9.64e-18 77.0
MS.gene067262.t1 AT3G57390 50.725 69 34 0 1 69 1 69 1.22e-17 78.2
MS.gene067262.t1 AT3G57230 46.377 69 37 0 1 69 1 69 1.31e-17 75.5
MS.gene067262.t1 AT4G22950 47.826 69 36 0 1 69 1 69 2.25e-17 75.5
MS.gene067262.t1 AT3G57230 46.377 69 37 0 1 69 1 69 3.10e-17 76.6
MS.gene067262.t1 AT3G57230 46.377 69 37 0 1 69 1 69 3.10e-17 76.6
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 1 86 4.99e-17 75.9
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 1 86 5.08e-17 75.5
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 2 87 5.18e-17 75.9
MS.gene067262.t1 AT2G45650 46.377 69 37 0 1 69 1 69 6.39e-17 75.9
MS.gene067262.t1 AT5G65080 35.915 142 85 3 1 136 8 149 6.49e-17 74.7
MS.gene067262.t1 AT2G22540 39.423 104 61 2 1 103 1 103 7.10e-17 75.9
MS.gene067262.t1 AT2G22540 39.423 104 61 2 1 103 1 103 7.10e-17 75.9
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 11 96 7.55e-17 75.5
MS.gene067262.t1 AT2G22630 49.275 69 35 0 1 69 1 69 8.69e-17 75.1
MS.gene067262.t1 AT2G22630 49.275 69 35 0 1 69 1 69 8.69e-17 75.1
MS.gene067262.t1 AT3G04100 43.421 76 40 1 2 74 14 89 1.00e-16 74.7
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 27 112 1.11e-16 75.5
MS.gene067262.t1 AT4G09960 38.462 91 51 1 1 91 96 181 1.58e-16 75.9
MS.gene067262.t1 AT4G22950 47.826 69 36 0 1 69 1 69 1.73e-16 74.3
MS.gene067262.t1 AT4G22950 47.826 69 36 0 1 69 1 69 1.73e-16 74.3
MS.gene067262.t1 AT1G17310 58.621 58 22 1 17 74 63 118 1.79e-16 74.3
MS.gene067262.t1 AT5G10140 54.386 57 26 0 1 57 1 57 1.84e-16 73.2
MS.gene067262.t1 AT1G17310 58.621 58 22 1 17 74 74 129 2.42e-16 73.9
MS.gene067262.t1 AT2G45660 36.364 99 58 1 1 99 1 94 3.05e-16 72.4
MS.gene067262.t1 AT5G10140 54.386 57 26 0 1 57 1 57 3.08e-16 72.8
MS.gene067262.t1 AT3G54340 35.185 108 55 1 1 93 1 108 3.16e-16 73.9
MS.gene067262.t1 AT5G10140 53.448 58 27 0 1 58 1 58 3.20e-16 72.8
MS.gene067262.t1 AT5G65070 43.210 81 44 2 1 79 1 81 3.60e-16 73.6
MS.gene067262.t1 AT5G10140 54.386 57 26 0 1 57 1 57 3.62e-16 72.8
MS.gene067262.t1 AT5G51870 46.377 69 37 0 1 69 1 69 3.76e-16 72.4
MS.gene067262.t1 AT4G37940 46.377 69 37 0 1 69 1 69 3.81e-16 73.6
MS.gene067262.t1 AT5G65070 45.070 71 37 1 1 69 1 71 4.01e-16 73.6
MS.gene067262.t1 AT5G51870 46.377 69 37 0 1 69 1 69 4.01e-16 73.2
MS.gene067262.t1 AT4G37940 46.377 69 37 0 1 69 1 69 5.17e-16 72.8
MS.gene067262.t1 AT5G65070 43.210 81 44 2 1 79 1 81 5.20e-16 72.8
MS.gene067262.t1 AT5G51870 46.377 69 37 0 1 69 24 92 6.06e-16 72.4
MS.gene067262.t1 AT5G51870 46.377 69 37 0 1 69 1 69 7.66e-16 72.4
MS.gene067262.t1 AT2G45660 36.364 99 58 1 1 99 1 94 8.00e-16 72.4
MS.gene067262.t1 AT4G37940 43.210 81 42 1 1 77 1 81 1.01e-15 71.2
MS.gene067262.t1 AT5G51870 46.377 69 37 0 1 69 11 79 1.19e-15 72.4
MS.gene067262.t1 AT2G22540 56.364 55 24 0 1 55 1 55 1.57e-15 72.0
MS.gene067262.t1 AT2G42830 38.298 94 53 2 1 94 16 104 1.99e-15 72.0
MS.gene067262.t1 AT5G51860 46.377 69 37 0 1 69 1 69 2.05e-15 71.2
MS.gene067262.t1 AT2G42830 38.298 94 53 2 1 94 16 104 2.13e-15 71.6
MS.gene067262.t1 AT5G51860 46.377 69 37 0 1 69 1 69 2.29e-15 71.2
MS.gene067262.t1 AT3G58780 38.298 94 53 2 1 94 16 104 2.32e-15 71.6
MS.gene067262.t1 AT5G65060 56.364 55 24 0 1 55 1 55 2.38e-15 70.9
MS.gene067262.t1 AT4G11880 53.448 58 27 0 1 58 1 58 2.40e-15 70.5
MS.gene067262.t1 AT4G11880 53.448 58 27 0 1 58 1 58 2.40e-15 70.5
MS.gene067262.t1 AT3G58780 38.298 94 53 2 1 94 22 110 2.53e-15 71.6
MS.gene067262.t1 AT5G20240 49.206 63 32 0 1 63 1 63 3.04e-15 69.3
MS.gene067262.t1 AT5G65050 54.545 55 25 0 1 55 1 55 3.06e-15 70.1
MS.gene067262.t1 AT5G65060 56.364 55 24 0 1 55 1 55 3.96e-15 70.1
MS.gene067262.t1 AT3G58780 40.698 86 38 1 1 73 16 101 4.00e-15 70.9
MS.gene067262.t1 AT5G65060 56.364 55 24 0 1 55 1 55 4.49e-15 69.7
MS.gene067262.t1 AT3G58780 38.298 94 53 2 1 94 16 104 4.68e-15 71.2
MS.gene067262.t1 AT1G22130 49.296 71 35 1 1 70 1 71 4.95e-15 71.6
MS.gene067262.t1 AT5G23260 59.649 57 23 0 1 57 1 57 5.48e-15 70.9
MS.gene067262.t1 AT5G23260 59.649 57 23 0 1 57 17 73 5.77e-15 70.9
MS.gene067262.t1 AT5G23260 59.649 57 23 0 1 57 1 57 5.85e-15 70.5
MS.gene067262.t1 AT2G14210 40.230 87 51 1 1 86 1 87 5.90e-15 70.5
MS.gene067262.t1 AT5G23260 59.649 57 23 0 1 57 17 73 5.99e-15 70.9
MS.gene067262.t1 AT1G71692 50.000 62 31 0 1 62 1 62 6.20e-15 70.1
MS.gene067262.t1 AT2G14210 40.230 87 51 1 1 86 1 87 6.83e-15 70.1
MS.gene067262.t1 AT4G11880 53.448 58 27 0 1 58 1 58 6.94e-15 70.1
MS.gene067262.t1 AT4G11880 53.448 58 27 0 1 58 1 58 6.94e-15 70.1
MS.gene067262.t1 AT5G20240 49.206 63 32 0 1 63 1 63 7.27e-15 69.7
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.61e-15 68.6
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.61e-15 68.6
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 7.61e-15 68.6
MS.gene067262.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.80e-15 68.2
MS.gene067262.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.80e-15 68.2
MS.gene067262.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.80e-15 68.2
MS.gene067262.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.80e-15 68.2
MS.gene067262.t1 AT5G62165 50.877 57 28 0 1 57 1 57 9.80e-15 68.2
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 1.03e-14 67.0
MS.gene067262.t1 AT4G18960 45.588 68 37 0 2 69 18 85 1.14e-14 70.1
MS.gene067262.t1 AT2G03710 54.386 57 26 0 1 57 1 57 1.20e-14 68.6
MS.gene067262.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.48e-14 68.6
MS.gene067262.t1 AT1G77980 47.887 71 36 1 1 70 1 71 1.52e-14 70.5
MS.gene067262.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.59e-14 68.6
MS.gene067262.t1 AT5G65050 54.545 55 25 0 1 55 1 55 1.67e-14 68.2
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 1.81e-14 68.6
MS.gene067262.t1 AT5G62165 40.000 75 45 0 1 75 1 75 1.81e-14 68.6
MS.gene067262.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene067262.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene067262.t1 AT5G62165 42.029 69 40 0 1 69 1 69 1.90e-14 68.6
MS.gene067262.t1 AT3G58780 29.545 132 93 0 1 132 16 147 2.61e-14 69.3
MS.gene067262.t1 AT5G65080 50.909 55 27 0 1 55 8 62 2.91e-14 68.2
MS.gene067262.t1 AT4G37435 32.240 183 76 9 1 147 1 171 3.46e-14 67.4
MS.gene067262.t1 AT3G30260 49.123 57 29 0 1 57 1 57 3.67e-14 68.6
MS.gene067262.t1 AT1G69120 43.056 72 38 1 1 72 1 69 4.14e-14 68.2
MS.gene067262.t1 AT2G03710 54.386 57 26 0 1 57 1 57 4.78e-14 68.2
MS.gene067262.t1 AT2G03710 54.386 57 26 0 1 57 1 57 4.97e-14 68.2
MS.gene067262.t1 AT1G46408 48.148 81 35 4 1 74 1 81 7.03e-14 67.8
MS.gene067262.t1 AT1G69120 43.056 72 38 1 1 72 1 69 7.99e-14 67.8
MS.gene067262.t1 AT5G15800 50.877 57 28 0 1 57 1 57 8.12e-14 67.8
MS.gene067262.t1 AT3G02310 50.877 57 28 0 1 57 1 57 9.14e-14 66.6
MS.gene067262.t1 AT1G28450 40.278 72 43 0 2 73 8 79 1.10e-13 66.2
MS.gene067262.t1 AT5G15800 50.877 57 28 0 1 57 1 57 1.24e-13 67.4
MS.gene067262.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.55e-13 66.6
MS.gene067262.t1 AT5G60910 40.278 72 40 1 1 72 1 69 1.55e-13 66.6
MS.gene067262.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.62e-13 66.6
MS.gene067262.t1 AT3G02310 50.877 57 28 0 1 57 1 57 1.72e-13 66.6
MS.gene067262.t1 AT1G24260 50.877 57 28 0 1 57 1 57 1.83e-13 66.6
MS.gene067262.t1 AT1G26310 46.552 58 31 0 1 58 1 58 2.03e-13 66.6
MS.gene067262.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.15e-12 65.5
MS.gene067262.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.18e-12 65.1
MS.gene067262.t1 AT1G18750 40.789 76 43 1 1 74 1 76 1.26e-12 65.1
MS.gene067262.t1 AT5G49490 44.444 72 36 1 3 70 46 117 1.75e-12 64.3
MS.gene067262.t1 AT1G69540 40.000 75 44 1 1 74 1 75 1.88e-12 64.7
MS.gene067262.t1 AT5G38620 43.056 72 37 1 3 70 6 77 2.04e-12 64.3
MS.gene067262.t1 AT1G69540 40.000 75 44 1 1 74 1 75 2.46e-12 64.3
MS.gene067262.t1 AT5G49420 42.857 77 39 2 3 74 8 84 2.76e-12 63.9
MS.gene067262.t1 AT1G60920 34.437 151 77 7 3 146 5 140 2.91e-12 62.4
MS.gene067262.t1 AT5G04640 40.260 77 41 2 3 74 5 81 3.49e-12 63.5
MS.gene067262.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.66e-12 62.0
MS.gene067262.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.66e-12 62.0
MS.gene067262.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.66e-12 62.0
MS.gene067262.t1 AT1G77950 38.028 71 43 1 1 70 1 71 9.66e-12 62.0
MS.gene067262.t1 AT2G26320 35.294 85 49 1 1 79 17 101 1.90e-11 58.5
MS.gene067262.t1 AT1G77080 66.667 39 13 0 1 39 1 39 2.95e-11 59.3
MS.gene067262.t1 AT1G77080 66.667 39 13 0 1 39 1 39 3.02e-11 59.3
MS.gene067262.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.34e-11 61.2
MS.gene067262.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.34e-11 61.2
MS.gene067262.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.34e-11 61.2
MS.gene067262.t1 AT2G03060 50.943 53 26 0 1 53 1 53 3.43e-11 61.2
MS.gene067262.t1 AT1G77080 66.667 39 13 0 1 39 1 39 5.64e-11 58.2
MS.gene067262.t1 AT1G77080 66.667 39 13 0 1 39 1 39 6.97e-11 58.9

Find 48 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATACAACAATAGCAATTT+TGG 0.202437 8.1:-59319986 None:intergenic
GGGAATAAACCTTACTCTTT+TGG 0.260036 8.1:+59320015 MS.gene067262:CDS
CCATCACCTTCTCATGTTGT+TGG 0.285658 8.1:-59320137 None:intergenic
AATGTGACTTGTCTCGCCTC+TGG 0.338519 8.1:-59319904 None:intergenic
TGATAGAGGAAGGGGTTTCT+AGG 0.342738 8.1:-59320101 None:intergenic
ATTAATGGAGCTCAAGGATA+TGG 0.358058 8.1:+59320260 MS.gene067262:CDS
TGAATGGAAAGATTCATTAA+TGG 0.358766 8.1:+59320245 MS.gene067262:CDS
ACATTCTCAAAGCGCCGAAT+GGG 0.416565 8.1:+59319922 MS.gene067262:CDS
ATTCATTAGGCTGGCTGAGT+AGG 0.419043 8.1:-59320227 None:intergenic
TTCTAGGACATCGTTTAGAT+CGG 0.426926 8.1:-59320085 None:intergenic
GCTATTGTTGTATTCTCTCC+CGG 0.429351 8.1:+59319994 MS.gene067262:CDS
AATGAATCTTTCCATTCATT+AGG 0.432801 8.1:-59320240 None:intergenic
TGATATAGCTGAGGCTGAAA+AGG 0.444985 8.1:+59320161 MS.gene067262:CDS
AATCTTTCCATTCATTAGGC+TGG 0.448210 8.1:-59320236 None:intergenic
AAAAGAGTAAGGTTTATTCC+CGG 0.457419 8.1:-59320013 None:intergenic
TCTAGGACATCGTTTAGATC+GGG 0.468128 8.1:-59320084 None:intergenic
ATGTGACTTGTCTCGCCTCT+GGG 0.475748 8.1:-59319903 None:intergenic
TTCATTAGGCTGGCTGAGTA+GGG 0.489121 8.1:-59320226 None:intergenic
CACATTCTCAAAGCGCCGAA+TGG 0.503482 8.1:+59319921 MS.gene067262:CDS
CCAGGGTGGCCAAAAGAGTA+AGG 0.504633 8.1:-59320024 None:intergenic
TACTCAGCCAGCCTAATGAA+TGG 0.511411 8.1:+59320229 MS.gene067262:CDS
TATGCTAAAAGAATACAAAT+CGG 0.512468 8.1:+59320203 MS.gene067262:CDS
ACGAGCTTGCCATCTTGTGT+GGG 0.513990 8.1:+59319962 MS.gene067262:CDS
ATCATCTATGATAGAGGAAG+GGG 0.519948 8.1:-59320109 None:intergenic
AACGAGCTTGCCATCTTGTG+TGG 0.526962 8.1:+59319961 MS.gene067262:CDS
AGATTCATTAATGGAGCTCA+AGG 0.527990 8.1:+59320254 MS.gene067262:CDS
CTATTGTTGTATTCTCTCCC+GGG 0.529578 8.1:+59319995 MS.gene067262:CDS
TGAGGCTGAAAAGGAAGATA+AGG 0.530489 8.1:+59320170 MS.gene067262:CDS
TTCTATGATGCTCCTTGCAA+AGG 0.533227 8.1:+59320317 MS.gene067262:CDS
ACAATTAACTCATTATGGGT+AGG 0.538610 8.1:+59319851 None:intergenic
CAACCACGGGCTCCTTTGCA+AGG 0.540458 8.1:-59320329 None:intergenic
AACCAAGCCACAGAAAAGAA+AGG 0.541403 8.1:+59320360 MS.gene067262:CDS
GACGCAATAGCATCAACACC+AGG 0.542737 8.1:-59320042 None:intergenic
AAAGAGTAAGGTTTATTCCC+GGG 0.547640 8.1:-59320012 None:intergenic
AGATCATCTATGATAGAGGA+AGG 0.556275 8.1:-59320111 None:intergenic
GTTCAGATCATCTATGATAG+AGG 0.558051 8.1:-59320115 None:intergenic
CTTGCAAAGGAGCCCGTGGT+TGG 0.559070 8.1:+59320330 MS.gene067262:CDS
GATCATCTATGATAGAGGAA+GGG 0.602776 8.1:-59320110 None:intergenic
TCTGAACCAACAACATGAGA+AGG 0.616384 8.1:+59320131 MS.gene067262:CDS
AAAGGAAGATAAGGCCAATG+AGG 0.641735 8.1:+59320179 MS.gene067262:CDS
CATTCTCAAAGCGCCGAATG+GGG 0.649352 8.1:+59319923 MS.gene067262:CDS
GCGCAAAATTGAGATTGCGA+TGG 0.660185 8.1:+59319873 MS.gene067262:CDS
CGAGCTTGCCATCTTGTGTG+GGG 0.663768 8.1:+59319963 MS.gene067262:CDS
GCTCCTTGCAAAGGAGCCCG+TGG 0.674787 8.1:+59320326 MS.gene067262:CDS
CCAACAACATGAGAAGGTGA+TGG 0.695579 8.1:+59320137 MS.gene067262:CDS
GGTGATGGCTGATATAGCTG+AGG 0.696275 8.1:+59320152 MS.gene067262:CDS
ACGCAATAGCATCAACACCA+GGG 0.722765 8.1:-59320041 None:intergenic
CAATAGCATCAACACCAGGG+TGG 0.755219 8.1:-59320038 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGCTAAAAGAATACAAAT+CGG + chr8.1:59320203-59320222 MS.gene067262:CDS 20.0%
! AATGAATCTTTCCATTCATT+AGG - chr8.1:59320243-59320262 None:intergenic 25.0%
! TGAATGGAAAGATTCATTAA+TGG + chr8.1:59320245-59320264 MS.gene067262:CDS 25.0%
!! ATATTTTCCTTTCTTTTCTG+TGG - chr8.1:59320370-59320389 None:intergenic 25.0%
!! GAATACAACAATAGCAATTT+TGG - chr8.1:59319989-59320008 None:intergenic 25.0%
AAAAGAGTAAGGTTTATTCC+CGG - chr8.1:59320016-59320035 None:intergenic 30.0%
! TTCTTTTAGCATATCCTCAT+TGG - chr8.1:59320196-59320215 None:intergenic 30.0%
!! TTGGTTTTTAATTCCAACCA+CGG - chr8.1:59320346-59320365 None:intergenic 30.0%
!!! CTTTTTTGAATAACCCCATT+CGG - chr8.1:59319939-59319958 None:intergenic 30.0%
AAAGAGTAAGGTTTATTCCC+GGG - chr8.1:59320015-59320034 None:intergenic 35.0%
AATCTTTCCATTCATTAGGC+TGG - chr8.1:59320239-59320258 None:intergenic 35.0%
AGATCATCTATGATAGAGGA+AGG - chr8.1:59320114-59320133 None:intergenic 35.0%
AGATTCATTAATGGAGCTCA+AGG + chr8.1:59320254-59320273 MS.gene067262:CDS 35.0%
ATCATCTATGATAGAGGAAG+GGG - chr8.1:59320112-59320131 None:intergenic 35.0%
ATTAATGGAGCTCAAGGATA+TGG + chr8.1:59320260-59320279 MS.gene067262:CDS 35.0%
GATCATCTATGATAGAGGAA+GGG - chr8.1:59320113-59320132 None:intergenic 35.0%
GTTCAGATCATCTATGATAG+AGG - chr8.1:59320118-59320137 None:intergenic 35.0%
! GGGAATAAACCTTACTCTTT+TGG + chr8.1:59320015-59320034 MS.gene067262:CDS 35.0%
!! TGGTTTTTAATTCCAACCAC+GGG - chr8.1:59320345-59320364 None:intergenic 35.0%
!! TTCTAGGACATCGTTTAGAT+CGG - chr8.1:59320088-59320107 None:intergenic 35.0%
AAAGGAAGATAAGGCCAATG+AGG + chr8.1:59320179-59320198 MS.gene067262:CDS 40.0%
AACCAAGCCACAGAAAAGAA+AGG + chr8.1:59320360-59320379 MS.gene067262:CDS 40.0%
CTATTGTTGTATTCTCTCCC+GGG + chr8.1:59319995-59320014 MS.gene067262:CDS 40.0%
GCTATTGTTGTATTCTCTCC+CGG + chr8.1:59319994-59320013 MS.gene067262:CDS 40.0%
TCTGAACCAACAACATGAGA+AGG + chr8.1:59320131-59320150 MS.gene067262:CDS 40.0%
TGAGGCTGAAAAGGAAGATA+AGG + chr8.1:59320170-59320189 MS.gene067262:CDS 40.0%
TGATATAGCTGAGGCTGAAA+AGG + chr8.1:59320161-59320180 MS.gene067262:CDS 40.0%
TTCTATGATGCTCCTTGCAA+AGG + chr8.1:59320317-59320336 MS.gene067262:CDS 40.0%
! TCTAGGACATCGTTTAGATC+GGG - chr8.1:59320087-59320106 None:intergenic 40.0%
! TTCCTTTCTTTTCTGTGGCT+TGG - chr8.1:59320365-59320384 None:intergenic 40.0%
ACGCAATAGCATCAACACCA+GGG - chr8.1:59320044-59320063 None:intergenic 45.0%
CCAACAACATGAGAAGGTGA+TGG + chr8.1:59320137-59320156 MS.gene067262:CDS 45.0%
CCATCACCTTCTCATGTTGT+TGG - chr8.1:59320140-59320159 None:intergenic 45.0%
GCGCAAAATTGAGATTGCGA+TGG + chr8.1:59319873-59319892 MS.gene067262:CDS 45.0%
TACTCAGCCAGCCTAATGAA+TGG + chr8.1:59320229-59320248 MS.gene067262:CDS 45.0%
TGATAGAGGAAGGGGTTTCT+AGG - chr8.1:59320104-59320123 None:intergenic 45.0%
! ATTCATTAGGCTGGCTGAGT+AGG - chr8.1:59320230-59320249 None:intergenic 45.0%
! TTCATTAGGCTGGCTGAGTA+GGG - chr8.1:59320229-59320248 None:intergenic 45.0%
!! AATTTTGGCCCCACACAAGA+TGG - chr8.1:59319974-59319993 None:intergenic 45.0%
!! ACATTCTCAAAGCGCCGAAT+GGG + chr8.1:59319922-59319941 MS.gene067262:CDS 45.0%
AACGAGCTTGCCATCTTGTG+TGG + chr8.1:59319961-59319980 MS.gene067262:CDS 50.0%
ACGAGCTTGCCATCTTGTGT+GGG + chr8.1:59319962-59319981 MS.gene067262:CDS 50.0%
CAATAGCATCAACACCAGGG+TGG - chr8.1:59320041-59320060 None:intergenic 50.0%
GACGCAATAGCATCAACACC+AGG - chr8.1:59320045-59320064 None:intergenic 50.0%
TGCGATGGTGAAAAACCCAG+AGG + chr8.1:59319888-59319907 MS.gene067262:CDS 50.0%
! AATGTGACTTGTCTCGCCTC+TGG - chr8.1:59319907-59319926 None:intergenic 50.0%
! ATGTGACTTGTCTCGCCTCT+GGG - chr8.1:59319906-59319925 None:intergenic 50.0%
! GGTGATGGCTGATATAGCTG+AGG + chr8.1:59320152-59320171 MS.gene067262:CDS 50.0%
!! CACATTCTCAAAGCGCCGAA+TGG + chr8.1:59319921-59319940 MS.gene067262:CDS 50.0%
!! CATTCTCAAAGCGCCGAATG+GGG + chr8.1:59319923-59319942 MS.gene067262:CDS 50.0%
CCAGGGTGGCCAAAAGAGTA+AGG - chr8.1:59320027-59320046 None:intergenic 55.0%
CGAGCTTGCCATCTTGTGTG+GGG + chr8.1:59319963-59319982 MS.gene067262:CDS 55.0%
! CCTTACTCTTTTGGCCACCC+TGG + chr8.1:59320024-59320043 MS.gene067262:CDS 55.0%
CAACCACGGGCTCCTTTGCA+AGG - chr8.1:59320332-59320351 None:intergenic 60.0%
CTTGCAAAGGAGCCCGTGGT+TGG + chr8.1:59320330-59320349 MS.gene067262:CDS 60.0%
GCTCCTTGCAAAGGAGCCCG+TGG + chr8.1:59320326-59320345 MS.gene067262:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 59319865 59320392 59319865 ID=MS.gene067262
chr8.1 mRNA 59319865 59320392 59319865 ID=MS.gene067262.t1;Parent=MS.gene067262
chr8.1 exon 59319865 59320392 59319865 ID=MS.gene067262.t1.exon1;Parent=MS.gene067262.t1
chr8.1 CDS 59319865 59320392 59319865 ID=cds.MS.gene067262.t1;Parent=MS.gene067262.t1
Gene Sequence

>MS.gene067262

ATGGGTAGGCGCAAAATTGAGATTGCGATGGTGAAAAACCCAGAGGCGAGACAAGTCACATTCTCAAAGCGCCGAATGGGGTTATTCAAAAAAGCAAACGAGCTTGCCATCTTGTGTGGGGCCAAAATTGCTATTGTTGTATTCTCTCCCGGGAATAAACCTTACTCTTTTGGCCACCCTGGTGTTGATGCTATTGCGTCTAAATTTCTTCAACAAGAGCCCGATCTAAACGATGTCCTAGAAACCCCTTCCTCTATCATAGATGATCTGAACCAACAACATGAGAAGGTGATGGCTGATATAGCTGAGGCTGAAAAGGAAGATAAGGCCAATGAGGATATGCTAAAAGAATACAAATCGGCCCTACTCAGCCAGCCTAATGAATGGAAAGATTCATTAATGGAGCTCAAGGATATGGTAAAATCACGTCTTCGTGATTTAGATATATCAGATTCTATGATGCTCCTTGCAAAGGAGCCCGTGGTTGGAATTAAAAACCAAGCCACAGAAAAGAAAGGAAAATATTAA
Protein sequence

>MS.gene067262.t1

MGRRKIEIAMVKNPEARQVTFSKRRMGLFKKANELAILCGAKIAIVVFSPGNKPYSFGHPGVDAIASKFLQQEPDLNDVLETPSSIIDDLNQQHEKVMADIAEAEKEDKANEDMLKEYKSALLSQPNEWKDSLMELKDMVKSRLRDLDISDSMMLLAKEPVVGIKNQATEKKGKY