AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067292

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067292.t1 MTR_8g027295 97.770 269 4 1 1 267 1 269 0.0 540
MS.gene067292.t1 MTR_3g091820 46.441 295 125 12 1 267 17 306 2.63e-69 216
MS.gene067292.t1 MTR_1g077600 44.815 270 104 12 4 258 21 260 1.30e-51 170
MS.gene067292.t1 MTR_1g077600 44.815 270 104 12 4 258 21 260 1.44e-51 170
MS.gene067292.t1 MTR_2g093220 75.000 72 16 1 9 78 23 94 9.71e-34 124
MS.gene067292.t1 MTR_3g077750 52.000 125 45 4 10 130 45 158 1.16e-30 117
MS.gene067292.t1 MTR_8g479350 54.808 104 41 2 21 124 65 162 1.88e-30 116
MS.gene067292.t1 MTR_4g063780 72.059 68 19 0 11 78 62 129 4.14e-30 115
MS.gene067292.t1 MTR_8g068210 66.250 80 24 2 15 92 21 99 1.32e-29 114
MS.gene067292.t1 MTR_4g022370 43.796 137 70 2 11 140 69 205 1.62e-29 114
MS.gene067292.t1 MTR_4g461080 69.014 71 20 1 8 76 11 81 1.64e-29 112
MS.gene067292.t1 MTR_3g090430 76.562 64 13 1 17 78 42 105 2.55e-29 113
MS.gene067292.t1 MTR_4g088580 73.529 68 14 1 26 93 57 120 3.85e-29 114
MS.gene067292.t1 MTR_1g056810 87.037 54 7 0 25 78 13 66 7.10e-29 111
MS.gene067292.t1 MTR_8g079060 48.214 112 48 2 11 116 10 117 8.32e-29 109
MS.gene067292.t1 MTR_2g096740 66.216 74 25 0 24 97 62 135 1.11e-28 110
MS.gene067292.t1 MTR_2g096740 66.216 74 25 0 24 97 77 150 1.23e-28 110
MS.gene067292.t1 MTR_2g014060 77.966 59 12 1 17 75 19 76 6.37e-28 109
MS.gene067292.t1 MTR_5g031440 78.182 55 12 0 20 74 39 93 8.76e-28 109
MS.gene067292.t1 MTR_8g015840 72.131 61 17 0 21 81 17 77 1.95e-27 105
MS.gene067292.t1 MTR_7g024670 83.019 53 9 0 26 78 79 131 6.02e-27 107
MS.gene067292.t1 MTR_7g059400 79.245 53 11 0 26 78 78 130 7.50e-27 107
MS.gene067292.t1 MTR_2g013370 58.108 74 30 1 6 79 28 100 1.06e-26 105
MS.gene067292.t1 MTR_4g089095 74.138 58 14 1 22 79 48 104 1.94e-26 105
MS.gene067292.t1 MTR_4g089095 74.138 58 14 1 22 79 14 70 2.57e-26 103
MS.gene067292.t1 MTR_3g435480 69.492 59 18 0 19 77 131 189 6.62e-26 105
MS.gene067292.t1 MTR_4g082060 64.062 64 23 0 19 82 117 180 2.77e-25 104
MS.gene067292.t1 MTR_4g109980 77.358 53 12 0 22 74 38 90 4.57e-25 101
MS.gene067292.t1 MTR_7g010950 67.797 59 19 0 19 77 130 188 5.16e-25 103
MS.gene067292.t1 MTR_2g059540 81.633 49 9 0 24 72 31 79 6.80e-25 98.6
MS.gene067292.t1 MTR_6g027450 60.317 63 25 0 19 81 84 146 8.29e-25 101
MS.gene067292.t1 MTR_7g086780 61.905 63 24 0 19 81 94 156 8.32e-25 102
MS.gene067292.t1 MTR_2g014170 79.592 49 10 0 24 72 45 93 1.78e-24 100
MS.gene067292.t1 MTR_2g016030 63.636 66 22 1 12 77 37 100 1.92e-24 96.3
MS.gene067292.t1 MTR_8g044220 61.290 62 24 0 19 80 113 174 2.99e-24 101
MS.gene067292.t1 MTR_6g027460 53.947 76 35 0 19 94 91 166 4.24e-24 100
MS.gene067292.t1 MTR_6g012450 66.102 59 20 0 19 77 131 189 4.40e-24 101
MS.gene067292.t1 MTR_5g041420 62.712 59 22 0 19 77 133 191 3.05e-23 97.1
MS.gene067292.t1 MTR_5g041530 66.667 54 18 0 24 77 140 193 3.85e-21 92.0
MS.gene067292.t1 MTR_5g041380 56.250 64 28 0 14 77 117 180 1.26e-20 90.5
MS.gene067292.t1 MTR_5g041400 56.250 64 28 0 14 77 109 172 1.33e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067292.t1 AT3G61850 51.246 281 86 19 16 267 54 312 3.12e-65 206
MS.gene067292.t1 AT3G61850 51.246 281 86 19 16 267 66 324 4.80e-65 206
MS.gene067292.t1 AT3G61850 48.889 270 81 16 16 267 54 284 6.50e-63 199
MS.gene067292.t1 AT3G61850 48.889 270 81 16 16 267 54 284 6.50e-63 199
MS.gene067292.t1 AT3G61850 48.889 270 81 16 16 267 66 296 1.21e-62 199
MS.gene067292.t1 AT2G46590 43.175 315 101 16 15 267 59 357 3.11e-53 176
MS.gene067292.t1 AT2G46590 43.175 315 101 16 15 267 71 369 3.72e-53 177
MS.gene067292.t1 AT4G24060 40.328 305 129 14 13 267 40 341 4.85e-45 155
MS.gene067292.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene067292.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene067292.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene067292.t1 AT1G64620 36.593 317 126 12 10 262 33 338 8.20e-38 136
MS.gene067292.t1 AT5G60200 48.780 123 57 2 10 130 41 159 6.87e-33 121
MS.gene067292.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.55e-31 119
MS.gene067292.t1 AT3G55370 73.529 68 18 0 11 78 108 175 1.78e-31 120
MS.gene067292.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.86e-31 119
MS.gene067292.t1 AT2G28510 55.357 112 46 2 22 130 46 156 2.19e-31 118
MS.gene067292.t1 AT3G45610 60.494 81 30 1 16 96 32 110 7.42e-30 112
MS.gene067292.t1 AT2G37590 75.410 61 15 0 18 78 83 143 8.70e-30 114
MS.gene067292.t1 AT1G51700 64.103 78 25 2 21 95 30 107 1.87e-29 110
MS.gene067292.t1 AT5G65590 64.935 77 23 1 18 94 35 107 1.97e-29 113
MS.gene067292.t1 AT3G52440 82.456 57 10 0 26 82 27 83 1.84e-28 109
MS.gene067292.t1 AT5G66940 74.138 58 15 0 21 78 29 86 2.11e-28 108
MS.gene067292.t1 AT3G52440 82.456 57 10 0 26 82 46 102 2.25e-28 109
MS.gene067292.t1 AT5G02460 67.647 68 22 0 11 78 82 149 3.30e-28 111
MS.gene067292.t1 AT3G50410 74.138 58 15 0 21 78 27 84 3.44e-28 108
MS.gene067292.t1 AT5G60850 58.333 84 30 1 22 105 49 127 1.08e-27 108
MS.gene067292.t1 AT3G21270 53.125 96 24 1 24 98 29 124 1.23e-27 105
MS.gene067292.t1 AT2G28810 68.182 66 20 1 11 75 63 128 1.59e-27 108
MS.gene067292.t1 AT2G28810 68.182 66 20 1 11 75 80 145 2.12e-27 108
MS.gene067292.t1 AT1G07640 78.182 55 12 0 24 78 21 75 2.21e-27 107
MS.gene067292.t1 AT1G07640 78.182 55 12 0 24 78 77 131 2.39e-27 108
MS.gene067292.t1 AT4G38000 64.474 76 24 2 10 83 25 99 2.51e-27 106
MS.gene067292.t1 AT1G07640 78.182 55 12 0 24 78 85 139 3.17e-27 108
MS.gene067292.t1 AT1G28310 75.000 56 14 0 24 79 27 82 3.59e-27 107
MS.gene067292.t1 AT1G21340 71.212 66 16 1 16 78 27 92 3.67e-27 106
MS.gene067292.t1 AT1G28310 75.000 56 14 0 24 79 51 106 5.58e-27 107
MS.gene067292.t1 AT1G69570 70.312 64 19 0 19 82 127 190 1.87e-26 107
MS.gene067292.t1 AT5G62940 85.714 49 7 0 26 74 75 123 4.89e-26 105
MS.gene067292.t1 AT4G21050 68.852 61 19 0 19 79 19 79 9.89e-26 101
MS.gene067292.t1 AT1G29160 61.765 68 26 0 10 77 48 115 1.06e-25 100
MS.gene067292.t1 AT2G34140 58.108 74 31 0 4 77 38 111 1.13e-25 99.8
MS.gene067292.t1 AT1G47655 76.923 52 12 0 22 73 27 78 3.41e-25 99.8
MS.gene067292.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene067292.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene067292.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene067292.t1 AT3G47500 66.102 59 20 0 19 77 105 163 3.69e-24 100
MS.gene067292.t1 AT5G62430 64.407 59 21 0 19 77 49 107 4.54e-24 98.6
MS.gene067292.t1 AT1G26790 66.102 59 20 0 19 77 106 164 7.46e-24 99.4
MS.gene067292.t1 AT4G21040 75.000 52 13 0 26 77 27 78 1.19e-23 96.3
MS.gene067292.t1 AT4G21080 71.154 52 15 0 26 77 27 78 1.39e-22 93.6
MS.gene067292.t1 AT4G21030 58.000 50 21 0 26 75 23 72 2.97e-13 67.0

Find 66 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTAATAACAATAATTT+AGG 0.092469 8.2:+70729880 MS.gene067292:CDS
TTTACAATTGATGGAATTAA+TGG 0.156949 8.2:+70729970 MS.gene067292:CDS
CCTTGCCTTGGACATGAATT+AGG 0.219906 8.2:-70729394 None:intergenic
AGTCTTGGATTTACAATTGA+TGG 0.273556 8.2:+70729961 MS.gene067292:CDS
AAGGAAATTCAACTGGATAT+TGG 0.307009 8.2:+70730130 MS.gene067292:CDS
ATGCTAATAACAATAATTTA+GGG 0.313695 8.2:+70729881 MS.gene067292:CDS
TCAAATGCTATTTATCCATC+TGG 0.339522 8.2:+70729913 MS.gene067292:CDS
TTCTTCTCTAATCCTTGCCT+TGG 0.373577 8.2:-70729406 None:intergenic
AAATTATTGTTATTAGCATA+AGG 0.374908 8.2:-70729877 None:intergenic
GGATAAATAGCATTTGAGTT+TGG 0.376465 8.2:-70729907 None:intergenic
CATGTCTTGCAAAAGTATCT+TGG 0.386535 8.2:-70729517 None:intergenic
GCAAGACATGTAGAAGGTAT+TGG 0.389030 8.2:+70729530 MS.gene067292:CDS
ATGAAAGATGTGAAACTTGT+AGG 0.415991 8.2:-70729678 None:intergenic
CTTGTAGGGTTGGTGGATTT+AGG 0.422116 8.2:-70729663 None:intergenic
AGGGTTGGTGGATTTAGGTC+AGG 0.429516 8.2:-70729658 None:intergenic
GATCAACAAGGAAATTCAAC+TGG 0.430255 8.2:+70730123 MS.gene067292:CDS
GGACAATTTATTTGCTCTTG+TGG 0.430301 8.2:-70729436 None:intergenic
TTTCTTGAACCACCTCCAAC+AGG 0.434621 8.2:-70729580 None:intergenic
AATTATTGTTATTAGCATAA+GGG 0.435765 8.2:-70729876 None:intergenic
TTAACATTAACATCTCCAAA+TGG 0.436637 8.2:-70730054 None:intergenic
GAAAAGCTAGGTTAAGATCT+TGG 0.443847 8.2:-70729726 None:intergenic
CAAGAAGTTAAACCTAGTCT+TGG 0.453651 8.2:+70729946 MS.gene067292:CDS
CTTCAGCTCTTGACCTACTT+AGG 0.461666 8.2:+70729827 MS.gene067292:CDS
GTTCAAGAAGGTGGTGGTGG+TGG 0.468196 8.2:+70730018 MS.gene067292:CDS
TAACATTAACATCTCCAAAT+GGG 0.469418 8.2:-70730053 None:intergenic
CTAAGAAATGTTCCTGTTGG+AGG 0.487652 8.2:+70729568 MS.gene067292:CDS
GTTATGCATCTCAACATATG+AGG 0.495564 8.2:-70729788 None:intergenic
GAAAACTATCATCATAATCA+TGG 0.499028 8.2:+70729757 MS.gene067292:CDS
TGTGAAACTTGTAGGGTTGG+TGG 0.499794 8.2:-70729670 None:intergenic
TGGATATTGGAATGGAATGA+TGG 0.500493 8.2:+70730143 MS.gene067292:CDS
TCTCTAAGAAATGTTCCTGT+TGG 0.507663 8.2:+70729565 MS.gene067292:CDS
TTCTACAAGTGGTGTTGAAG+TGG 0.514078 8.2:+70730089 MS.gene067292:CDS
AGAAATGTTCCTGTTGGAGG+TGG 0.521904 8.2:+70729571 MS.gene067292:CDS
ACTAGGTTTAACTTCTTGCA+TGG 0.527857 8.2:-70729941 None:intergenic
TGATGAACTATTATTAGGTG+TGG 0.533433 8.2:-70729629 None:intergenic
TGTAGAAGGTATTGGACTGA+AGG 0.537478 8.2:+70729538 MS.gene067292:CDS
AATTCAACTGGATATTGGAA+TGG 0.543811 8.2:+70730135 MS.gene067292:CDS
TTAGGTGTGGCTAATGATGA+AGG 0.550310 8.2:-70729616 None:intergenic
TATAGGTATATACTCATGGA+AGG 0.550898 8.2:+70729364 None:intergenic
AATAAACAGCTTTCTACAAG+TGG 0.552575 8.2:+70730078 MS.gene067292:CDS
GAATGATGGGTGAAGGATCA+TGG 0.555879 8.2:+70730157 MS.gene067292:CDS
TTTCCATAGATGGAAAAGCT+AGG 0.562893 8.2:-70729738 None:intergenic
ATGCCATGCTTGACCTAAGT+AGG 0.567095 8.2:-70729840 None:intergenic
TCTTGCATGGTGAATCCAGA+TGG 0.582527 8.2:-70729928 None:intergenic
CAAGTTCAAGAAGGTGGTGG+TGG 0.585887 8.2:+70730015 MS.gene067292:CDS
AGATGTGAAACTTGTAGGGT+TGG 0.588666 8.2:-70729673 None:intergenic
TGAAAGATGTGAAACTTGTA+GGG 0.592727 8.2:-70729677 None:intergenic
TGCATCTCAACATATGAGGA+TGG 0.597529 8.2:-70729784 None:intergenic
TCTCAAAACCCTAAAATACA+AGG 0.599552 8.2:+70729700 MS.gene067292:CDS
TCAATTGTAAATCCAAGACT+AGG 0.600734 8.2:-70729958 None:intergenic
TGGAATGGAATGATGGGTGA+AGG 0.602503 8.2:+70730150 MS.gene067292:CDS
GGATATTGGAATGGAATGAT+GGG 0.607936 8.2:+70730144 MS.gene067292:CDS
AAGAGCAAATAAATTGTCCA+AGG 0.610950 8.2:+70729440 MS.gene067292:CDS
GATCATGTTCAAGTTCAAGA+AGG 0.611680 8.2:+70730006 MS.gene067292:CDS
TAGCTCCTAATTCATGTCCA+AGG 0.613211 8.2:+70729389 MS.gene067292:CDS
CCTAATTCATGTCCAAGGCA+AGG 0.615681 8.2:+70729394 MS.gene067292:CDS
AGAAGGTATTGGACTGAAGG+AGG 0.618740 8.2:+70729541 MS.gene067292:CDS
GTTCAAGTTCAAGAAGGTGG+TGG 0.620240 8.2:+70730012 MS.gene067292:CDS
AAGGATTAGAGAAGAAAGCA+AGG 0.621824 8.2:+70729413 MS.gene067292:CDS
AGGTCAAGCATGGCATCTAG+AGG 0.626491 8.2:+70729847 MS.gene067292:CDS
CATGTTCAAGTTCAAGAAGG+TGG 0.629706 8.2:+70730009 MS.gene067292:CDS
TGACCTACTTAGGTCAAGCA+TGG 0.637135 8.2:+70729837 MS.gene067292:CDS
GTGTTGGTTGAATTGCACCT+TGG 0.648497 8.2:-70729457 None:intergenic
ATAGGTATATACTCATGGAA+GGG 0.653687 8.2:+70729365 None:intergenic
CAAAACCCTAAAATACAAGG+AGG 0.720797 8.2:+70729703 MS.gene067292:CDS
GAACACAATAAAGATCAACA+AGG 0.746748 8.2:+70730111 MS.gene067292:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCTAATAACAATAATTTA+GGG + chr8.2:70729881-70729900 MS.gene067292:CDS 15.0%
!! TATGCTAATAACAATAATTT+AGG + chr8.2:70729880-70729899 MS.gene067292:CDS 15.0%
!!! AAATTATTGTTATTAGCATA+AGG - chr8.2:70729880-70729899 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG - chr8.2:70729879-70729898 None:intergenic 15.0%
!!! ATTTTTGATGAACTATTATT+AGG - chr8.2:70729637-70729656 None:intergenic 15.0%
!! TTTACAATTGATGGAATTAA+TGG + chr8.2:70729970-70729989 MS.gene067292:CDS 20.0%
!!! GTAATAACAAAATTTTGTGT+TGG - chr8.2:70729476-70729495 None:intergenic 20.0%
! GAAAACTATCATCATAATCA+TGG + chr8.2:70729757-70729776 MS.gene067292:CDS 25.0%
! TAACATTAACATCTCCAAAT+GGG - chr8.2:70730056-70730075 None:intergenic 25.0%
! TTAACATTAACATCTCCAAA+TGG - chr8.2:70730057-70730076 None:intergenic 25.0%
AAGAGCAAATAAATTGTCCA+AGG + chr8.2:70729440-70729459 MS.gene067292:CDS 30.0%
AAGGAAATTCAACTGGATAT+TGG + chr8.2:70730130-70730149 MS.gene067292:CDS 30.0%
AATAAACAGCTTTCTACAAG+TGG + chr8.2:70730078-70730097 MS.gene067292:CDS 30.0%
AATTCAACTGGATATTGGAA+TGG + chr8.2:70730135-70730154 MS.gene067292:CDS 30.0%
AGTCTTGGATTTACAATTGA+TGG + chr8.2:70729961-70729980 MS.gene067292:CDS 30.0%
ATGAAAGATGTGAAACTTGT+AGG - chr8.2:70729681-70729700 None:intergenic 30.0%
GAACACAATAAAGATCAACA+AGG + chr8.2:70730111-70730130 MS.gene067292:CDS 30.0%
TCAATTGTAAATCCAAGACT+AGG - chr8.2:70729961-70729980 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG + chr8.2:70729700-70729719 MS.gene067292:CDS 30.0%
TGAAAGATGTGAAACTTGTA+GGG - chr8.2:70729680-70729699 None:intergenic 30.0%
TGATGAACTATTATTAGGTG+TGG - chr8.2:70729632-70729651 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG - chr8.2:70729910-70729929 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG + chr8.2:70729913-70729932 MS.gene067292:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG - chr8.2:70729751-70729770 None:intergenic 30.0%
AAGGATTAGAGAAGAAAGCA+AGG + chr8.2:70729413-70729432 MS.gene067292:CDS 35.0%
CAAAACCCTAAAATACAAGG+AGG + chr8.2:70729703-70729722 MS.gene067292:CDS 35.0%
CAAGAAGTTAAACCTAGTCT+TGG + chr8.2:70729946-70729965 MS.gene067292:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG - chr8.2:70729729-70729748 None:intergenic 35.0%
GATCAACAAGGAAATTCAAC+TGG + chr8.2:70730123-70730142 MS.gene067292:CDS 35.0%
GGACAATTTATTTGCTCTTG+TGG - chr8.2:70729439-70729458 None:intergenic 35.0%
GGATATTGGAATGGAATGAT+GGG + chr8.2:70730144-70730163 MS.gene067292:CDS 35.0%
GTTATGCATCTCAACATATG+AGG - chr8.2:70729791-70729810 None:intergenic 35.0%
TGGATATTGGAATGGAATGA+TGG + chr8.2:70730143-70730162 MS.gene067292:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG - chr8.2:70729741-70729760 None:intergenic 35.0%
! ACTAGGTTTAACTTCTTGCA+TGG - chr8.2:70729944-70729963 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG + chr8.2:70729524-70729543 MS.gene067292:CDS 35.0%
! GATCATGTTCAAGTTCAAGA+AGG + chr8.2:70730006-70730025 MS.gene067292:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG + chr8.2:70729565-70729584 MS.gene067292:CDS 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG - chr8.2:70729520-70729539 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG + chr8.2:70729735-70729754 MS.gene067292:CDS 35.0%
AGATGTGAAACTTGTAGGGT+TGG - chr8.2:70729676-70729695 None:intergenic 40.0%
CTAAGAAATGTTCCTGTTGG+AGG + chr8.2:70729568-70729587 MS.gene067292:CDS 40.0%
TAGCTCCTAATTCATGTCCA+AGG + chr8.2:70729389-70729408 MS.gene067292:CDS 40.0%
TGCATCTCAACATATGAGGA+TGG - chr8.2:70729787-70729806 None:intergenic 40.0%
TTAGGTGTGGCTAATGATGA+AGG - chr8.2:70729619-70729638 None:intergenic 40.0%
TTCTTCTCTAATCCTTGCCT+TGG - chr8.2:70729409-70729428 None:intergenic 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG + chr8.2:70730009-70730028 MS.gene067292:CDS 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG - chr8.2:70729711-70729730 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG + chr8.2:70729530-70729549 MS.gene067292:CDS 40.0%
! GGAAGACTTTTGTTCCCATT+TGG + chr8.2:70730039-70730058 MS.gene067292:CDS 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG - chr8.2:70729712-70729731 None:intergenic 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG + chr8.2:70730089-70730108 MS.gene067292:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr8.2:70729538-70729557 MS.gene067292:CDS 40.0%
AGAAATGTTCCTGTTGGAGG+TGG + chr8.2:70729571-70729590 MS.gene067292:CDS 45.0%
ATGCCATGCTTGACCTAAGT+AGG - chr8.2:70729843-70729862 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG + chr8.2:70729394-70729413 MS.gene067292:CDS 45.0%
CCTTGCCTTGGACATGAATT+AGG - chr8.2:70729397-70729416 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG + chr8.2:70729827-70729846 MS.gene067292:CDS 45.0%
TCTTGCATGGTGAATCCAGA+TGG - chr8.2:70729931-70729950 None:intergenic 45.0%
TGACCTACTTAGGTCAAGCA+TGG + chr8.2:70729837-70729856 MS.gene067292:CDS 45.0%
TGTGAAACTTGTAGGGTTGG+TGG - chr8.2:70729673-70729692 None:intergenic 45.0%
TTTCTTGAACCACCTCCAAC+AGG - chr8.2:70729583-70729602 None:intergenic 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG + chr8.2:70730012-70730031 MS.gene067292:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG + chr8.2:70729541-70729560 MS.gene067292:CDS 45.0%
!! CTTGTAGGGTTGGTGGATTT+AGG - chr8.2:70729666-70729685 None:intergenic 45.0%
!! GAATGATGGGTGAAGGATCA+TGG + chr8.2:70730157-70730176 MS.gene067292:CDS 45.0%
!! GTGTTGGTTGAATTGCACCT+TGG - chr8.2:70729460-70729479 None:intergenic 45.0%
!! TGGAATGGAATGATGGGTGA+AGG + chr8.2:70730150-70730169 MS.gene067292:CDS 45.0%
AGGTCAAGCATGGCATCTAG+AGG + chr8.2:70729847-70729866 MS.gene067292:CDS 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG + chr8.2:70730015-70730034 MS.gene067292:CDS 50.0%
!! AGGGTTGGTGGATTTAGGTC+AGG - chr8.2:70729661-70729680 None:intergenic 50.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG + chr8.2:70730018-70730037 MS.gene067292:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 70729379 70730182 70729379 ID=MS.gene067292
chr8.2 mRNA 70729379 70730182 70729379 ID=MS.gene067292.t1;Parent=MS.gene067292
chr8.2 exon 70729379 70730182 70729379 ID=MS.gene067292.t1.exon1;Parent=MS.gene067292.t1
chr8.2 CDS 70729379 70730182 70729379 ID=cds.MS.gene067292.t1;Parent=MS.gene067292.t1
Gene Sequence

>MS.gene067292

ATGGAAGGGTTAGCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAATAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCATCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAACAATAATTTAGGGTTGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAAGTTAAACCTAGTCTTGGATTTACAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTTCAAGAAGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA
Protein sequence

>MS.gene067292.t1

MEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNLGLPNSNAIYPSGFTMQEVKPSLGFTIDGINGNRSYDHVQVQEGGGGGRLLFPFGDVNVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW