Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06753.t1 | XP_003602195.1 | 97.4 | 340 | 9 | 0 | 1 | 340 | 1 | 340 | 5.10E-186 | 660.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06753.t1 | Q8H0Y8 | 35.6 | 351 | 164 | 12 | 3 | 336 | 7 | 312 | 1.1e-35 | 152.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06753.t1 | B3U399 | 97.4 | 340 | 9 | 0 | 1 | 340 | 1 | 340 | 3.7e-186 | 660.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene06753.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06753.t1 | MTR_3g090860 | 97.353 | 340 | 9 | 0 | 1 | 340 | 1 | 340 | 0.0 | 689 |
MS.gene06753.t1 | MTR_8g099350 | 37.057 | 367 | 181 | 15 | 7 | 340 | 12 | 361 | 1.26e-53 | 180 |
MS.gene06753.t1 | MTR_7g117200 | 35.211 | 355 | 170 | 14 | 7 | 340 | 12 | 327 | 1.33e-50 | 171 |
MS.gene06753.t1 | MTR_8g027860 | 36.111 | 360 | 169 | 15 | 7 | 334 | 12 | 342 | 3.68e-47 | 163 |
MS.gene06753.t1 | MTR_7g073430 | 33.333 | 204 | 102 | 4 | 2 | 197 | 9 | 186 | 1.49e-25 | 103 |
MS.gene06753.t1 | MTR_7g073380 | 32.487 | 197 | 97 | 5 | 7 | 194 | 15 | 184 | 1.46e-24 | 101 |
MS.gene06753.t1 | MTR_5g067680 | 62.500 | 64 | 24 | 0 | 129 | 192 | 198 | 261 | 2.59e-23 | 99.4 |
MS.gene06753.t1 | MTR_8g005750 | 32.273 | 220 | 120 | 6 | 8 | 227 | 6 | 196 | 2.15e-21 | 92.8 |
MS.gene06753.t1 | MTR_3g093830 | 31.797 | 217 | 116 | 9 | 13 | 221 | 23 | 215 | 1.50e-20 | 90.9 |
MS.gene06753.t1 | MTR_0002s1250 | 29.000 | 200 | 116 | 4 | 1 | 198 | 1 | 176 | 4.25e-20 | 88.6 |
MS.gene06753.t1 | MTR_2g075750 | 39.583 | 96 | 58 | 0 | 132 | 227 | 27 | 122 | 1.61e-18 | 82.4 |
MS.gene06753.t1 | MTR_5g067700 | 42.697 | 89 | 51 | 0 | 104 | 192 | 77 | 165 | 2.33e-18 | 83.2 |
MS.gene06753.t1 | MTR_1g009613 | 40.441 | 136 | 54 | 8 | 84 | 200 | 207 | 334 | 2.91e-18 | 84.7 |
MS.gene06753.t1 | MTR_2g075690 | 30.732 | 205 | 107 | 7 | 5 | 192 | 14 | 200 | 4.93e-18 | 83.6 |
MS.gene06753.t1 | MTR_5g073620 | 42.683 | 82 | 45 | 1 | 125 | 206 | 664 | 743 | 1.78e-17 | 84.0 |
MS.gene06753.t1 | MTR_2g075610 | 32.576 | 132 | 80 | 2 | 132 | 263 | 28 | 150 | 2.56e-17 | 79.3 |
MS.gene06753.t1 | MTR_2g075700 | 39.773 | 88 | 45 | 1 | 105 | 192 | 124 | 203 | 1.21e-16 | 79.7 |
MS.gene06753.t1 | MTR_8g028565 | 42.105 | 95 | 50 | 2 | 134 | 225 | 156 | 248 | 1.65e-16 | 79.7 |
MS.gene06753.t1 | MTR_2g075680 | 30.542 | 203 | 117 | 5 | 5 | 192 | 14 | 207 | 2.18e-16 | 79.0 |
MS.gene06753.t1 | MTR_5g016610 | 44.828 | 87 | 44 | 3 | 104 | 190 | 172 | 254 | 2.86e-16 | 78.2 |
MS.gene06753.t1 | MTR_7g079010 | 34.532 | 139 | 81 | 3 | 67 | 203 | 80 | 210 | 4.27e-16 | 76.6 |
MS.gene06753.t1 | MTR_8g098945 | 51.562 | 64 | 29 | 1 | 127 | 190 | 123 | 184 | 4.50e-16 | 77.4 |
MS.gene06753.t1 | MTR_7g079040 | 34.337 | 166 | 100 | 4 | 126 | 284 | 147 | 310 | 5.52e-16 | 78.2 |
MS.gene06753.t1 | MTR_4g094908 | 41.509 | 106 | 48 | 6 | 101 | 199 | 236 | 334 | 7.01e-16 | 77.8 |
MS.gene06753.t1 | MTR_1g070455 | 56.140 | 57 | 23 | 1 | 134 | 190 | 294 | 348 | 4.58e-15 | 75.9 |
MS.gene06753.t1 | MTR_7g109600 | 54.839 | 62 | 26 | 1 | 129 | 190 | 49 | 108 | 7.10e-15 | 73.9 |
MS.gene06753.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 75 | 132 | 1.52e-14 | 72.8 |
MS.gene06753.t1 | MTR_8g087000 | 55.000 | 60 | 25 | 1 | 131 | 190 | 74 | 131 | 1.64e-14 | 72.8 |
MS.gene06753.t1 | MTR_7g011820 | 47.692 | 65 | 30 | 2 | 126 | 190 | 221 | 281 | 2.05e-14 | 74.3 |
MS.gene06753.t1 | MTR_7g011820 | 50.847 | 59 | 26 | 1 | 132 | 190 | 409 | 464 | 2.54e-13 | 71.2 |
MS.gene06753.t1 | MTR_2g083870 | 39.823 | 113 | 54 | 3 | 86 | 190 | 29 | 135 | 2.60e-14 | 72.4 |
MS.gene06753.t1 | MTR_8g032510 | 48.333 | 60 | 31 | 0 | 133 | 192 | 119 | 178 | 3.02e-14 | 72.4 |
MS.gene06753.t1 | MTR_8g007270 | 52.542 | 59 | 25 | 1 | 132 | 190 | 153 | 208 | 3.13e-14 | 71.6 |
MS.gene06753.t1 | MTR_2g032030 | 43.689 | 103 | 50 | 4 | 134 | 231 | 268 | 367 | 3.38e-14 | 73.6 |
MS.gene06753.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 27 | 90 | 3.61e-14 | 71.2 |
MS.gene06753.t1 | MTR_2g032030 | 43.689 | 103 | 50 | 4 | 134 | 231 | 268 | 367 | 3.72e-14 | 73.6 |
MS.gene06753.t1 | MTR_8g092140 | 52.542 | 59 | 25 | 1 | 132 | 190 | 159 | 214 | 4.06e-14 | 71.2 |
MS.gene06753.t1 | MTR_7g028415 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.22e-14 | 69.7 |
MS.gene06753.t1 | MTR_7g028710 | 53.333 | 60 | 25 | 1 | 132 | 191 | 92 | 148 | 4.22e-14 | 69.7 |
MS.gene06753.t1 | MTR_4g127040 | 36.522 | 115 | 65 | 3 | 81 | 190 | 189 | 300 | 4.24e-14 | 72.4 |
MS.gene06753.t1 | MTR_7g062220 | 55.738 | 61 | 24 | 1 | 130 | 190 | 121 | 178 | 4.49e-14 | 72.4 |
MS.gene06753.t1 | MTR_2g016770 | 51.515 | 66 | 27 | 2 | 128 | 190 | 19 | 82 | 4.57e-14 | 70.5 |
MS.gene06753.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 173 | 244 | 5.01e-14 | 72.8 |
MS.gene06753.t1 | MTR_7g110720 | 51.351 | 74 | 33 | 2 | 118 | 190 | 200 | 271 | 5.27e-14 | 72.8 |
MS.gene06753.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 167 | 222 | 9.49e-14 | 70.5 |
MS.gene06753.t1 | MTR_3g095080 | 52.542 | 59 | 25 | 1 | 132 | 190 | 143 | 198 | 1.24e-13 | 69.7 |
MS.gene06753.t1 | MTR_1g099600 | 52.632 | 57 | 25 | 1 | 134 | 190 | 186 | 240 | 1.75e-13 | 70.5 |
MS.gene06753.t1 | MTR_7g109800 | 51.667 | 60 | 26 | 1 | 132 | 191 | 144 | 200 | 2.12e-13 | 70.1 |
MS.gene06753.t1 | MTR_7g080020 | 53.448 | 58 | 23 | 2 | 133 | 190 | 280 | 333 | 2.17e-13 | 71.6 |
MS.gene06753.t1 | MTR_7g080020 | 36.190 | 105 | 52 | 4 | 93 | 190 | 451 | 547 | 3.53e-11 | 64.7 |
MS.gene06753.t1 | MTR_4g094588 | 44.928 | 69 | 35 | 1 | 132 | 200 | 177 | 242 | 2.91e-13 | 70.1 |
MS.gene06753.t1 | MTR_5g043880 | 52.542 | 59 | 25 | 1 | 132 | 190 | 123 | 178 | 3.41e-13 | 69.3 |
MS.gene06753.t1 | MTR_5g091390 | 49.206 | 63 | 27 | 2 | 132 | 192 | 156 | 215 | 4.80e-13 | 69.3 |
MS.gene06753.t1 | MTR_2g088000 | 54.237 | 59 | 25 | 1 | 132 | 190 | 348 | 404 | 5.71e-13 | 70.1 |
MS.gene06753.t1 | MTR_1g015140 | 50.000 | 60 | 27 | 1 | 132 | 191 | 101 | 157 | 6.32e-13 | 66.2 |
MS.gene06753.t1 | MTR_4g082580 | 50.000 | 58 | 26 | 1 | 133 | 190 | 145 | 199 | 6.81e-13 | 69.3 |
MS.gene06753.t1 | MTR_4g082580 | 47.458 | 59 | 28 | 1 | 132 | 190 | 277 | 332 | 5.00e-11 | 63.5 |
MS.gene06753.t1 | MTR_3g009470 | 51.667 | 60 | 25 | 2 | 131 | 190 | 278 | 333 | 6.91e-13 | 69.7 |
MS.gene06753.t1 | MTR_3g009470 | 51.667 | 60 | 25 | 2 | 131 | 190 | 278 | 333 | 7.21e-13 | 70.1 |
MS.gene06753.t1 | MTR_3g009470 | 33.628 | 113 | 63 | 3 | 132 | 240 | 494 | 598 | 5.93e-12 | 67.0 |
MS.gene06753.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 126 | 183 | 1.26e-12 | 68.6 |
MS.gene06753.t1 | MTR_1g086790 | 50.000 | 60 | 27 | 1 | 132 | 191 | 157 | 213 | 1.55e-12 | 67.8 |
MS.gene06753.t1 | MTR_2g023930 | 52.542 | 59 | 26 | 1 | 132 | 190 | 304 | 360 | 1.61e-12 | 68.6 |
MS.gene06753.t1 | MTR_3g104750 | 48.333 | 60 | 28 | 1 | 132 | 191 | 103 | 159 | 1.65e-12 | 65.1 |
MS.gene06753.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 363 | 418 | 1.83e-12 | 68.6 |
MS.gene06753.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 190 | 253 | 3.27e-11 | 64.7 |
MS.gene06753.t1 | MTR_5g042920 | 46.479 | 71 | 33 | 3 | 121 | 190 | 138 | 204 | 1.92e-12 | 68.2 |
MS.gene06753.t1 | MTR_5g042920 | 37.500 | 120 | 57 | 5 | 86 | 190 | 258 | 374 | 2.89e-12 | 67.8 |
MS.gene06753.t1 | MTR_2g033820 | 50.000 | 60 | 27 | 1 | 132 | 191 | 202 | 258 | 2.08e-12 | 67.8 |
MS.gene06753.t1 | MTR_8g096730 | 44.068 | 59 | 30 | 1 | 132 | 190 | 69 | 124 | 2.11e-12 | 64.3 |
MS.gene06753.t1 | MTR_7g100510 | 43.243 | 74 | 34 | 2 | 122 | 190 | 345 | 415 | 2.62e-12 | 67.8 |
MS.gene06753.t1 | MTR_7g100510 | 50.000 | 60 | 26 | 2 | 131 | 190 | 187 | 242 | 1.14e-11 | 65.9 |
MS.gene06753.t1 | MTR_4g132430 | 51.667 | 60 | 27 | 1 | 132 | 191 | 260 | 317 | 2.83e-12 | 67.8 |
MS.gene06753.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 401 | 456 | 2.84e-12 | 68.2 |
MS.gene06753.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.22e-11 | 65.1 |
MS.gene06753.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 251 | 306 | 3.05e-12 | 67.4 |
MS.gene06753.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 78 | 141 | 4.44e-11 | 63.9 |
MS.gene06753.t1 | MTR_5g094430 | 49.153 | 59 | 27 | 1 | 132 | 190 | 229 | 284 | 3.07e-12 | 67.4 |
MS.gene06753.t1 | MTR_5g094430 | 47.059 | 68 | 30 | 3 | 125 | 190 | 56 | 119 | 4.96e-11 | 63.9 |
MS.gene06753.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 414 | 469 | 3.09e-12 | 67.8 |
MS.gene06753.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 236 | 296 | 2.36e-11 | 65.1 |
MS.gene06753.t1 | MTR_3g108960 | 50.877 | 57 | 26 | 1 | 134 | 190 | 315 | 369 | 3.90e-12 | 67.0 |
MS.gene06753.t1 | MTR_7g080000 | 52.542 | 59 | 24 | 2 | 132 | 190 | 233 | 287 | 4.32e-12 | 67.4 |
MS.gene06753.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 257 | 312 | 4.48e-12 | 67.0 |
MS.gene06753.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.21e-11 | 64.3 |
MS.gene06753.t1 | MTR_3g056100 | 49.153 | 59 | 27 | 1 | 132 | 190 | 270 | 325 | 4.86e-12 | 67.0 |
MS.gene06753.t1 | MTR_3g056100 | 47.692 | 65 | 30 | 2 | 126 | 190 | 92 | 152 | 3.32e-11 | 64.3 |
MS.gene06753.t1 | MTR_1g013760 | 52.632 | 57 | 25 | 1 | 134 | 190 | 141 | 195 | 6.24e-12 | 65.9 |
MS.gene06753.t1 | MTR_0117s0040 | 50.877 | 57 | 26 | 1 | 134 | 190 | 75 | 129 | 6.56e-12 | 65.1 |
MS.gene06753.t1 | MTR_2g045360 | 34.247 | 146 | 70 | 5 | 134 | 260 | 212 | 350 | 7.10e-12 | 66.6 |
MS.gene06753.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 1.27e-11 | 65.5 |
MS.gene06753.t1 | MTR_5g074400 | 50.000 | 58 | 25 | 2 | 133 | 190 | 243 | 296 | 1.29e-11 | 65.9 |
MS.gene06753.t1 | MTR_5g074400 | 49.153 | 59 | 27 | 1 | 132 | 190 | 419 | 474 | 2.43e-11 | 65.1 |
MS.gene06753.t1 | MTR_8g069935 | 34.524 | 84 | 46 | 3 | 107 | 190 | 312 | 386 | 1.33e-11 | 65.9 |
MS.gene06753.t1 | MTR_4g049760 | 30.508 | 177 | 101 | 8 | 24 | 190 | 181 | 345 | 1.73e-11 | 65.5 |
MS.gene06753.t1 | MTR_3g031220 | 46.032 | 63 | 31 | 1 | 132 | 194 | 364 | 423 | 1.90e-11 | 65.5 |
MS.gene06753.t1 | MTR_3g031220 | 50.000 | 58 | 25 | 2 | 133 | 190 | 198 | 251 | 2.18e-11 | 65.1 |
MS.gene06753.t1 | MTR_7g071120 | 50.000 | 58 | 25 | 2 | 133 | 190 | 166 | 219 | 2.45e-11 | 65.1 |
MS.gene06753.t1 | MTR_4g122530 | 47.458 | 59 | 28 | 1 | 132 | 190 | 207 | 262 | 2.50e-11 | 64.7 |
MS.gene06753.t1 | MTR_8g067635 | 46.552 | 58 | 29 | 1 | 133 | 190 | 349 | 404 | 2.73e-11 | 65.1 |
MS.gene06753.t1 | MTR_5g097490 | 47.541 | 61 | 29 | 1 | 130 | 190 | 249 | 306 | 2.87e-11 | 64.3 |
MS.gene06753.t1 | MTR_8g067650 | 46.552 | 58 | 29 | 1 | 133 | 190 | 339 | 394 | 3.41e-11 | 64.7 |
MS.gene06753.t1 | MTR_4g013260 | 47.458 | 59 | 28 | 1 | 132 | 190 | 335 | 390 | 4.27e-11 | 64.3 |
MS.gene06753.t1 | MTR_4g013260 | 46.552 | 58 | 28 | 2 | 133 | 190 | 184 | 238 | 8.40e-11 | 63.2 |
MS.gene06753.t1 | MTR_4g049790 | 29.310 | 174 | 104 | 7 | 24 | 190 | 206 | 367 | 5.19e-11 | 63.9 |
MS.gene06753.t1 | MTR_7g009730 | 43.243 | 74 | 39 | 2 | 118 | 190 | 203 | 274 | 8.08e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06753.t1 | AT4G11070 | 35.795 | 352 | 162 | 13 | 3 | 336 | 7 | 312 | 1.73e-46 | 160 |
MS.gene06753.t1 | AT4G23810 | 37.037 | 270 | 132 | 10 | 3 | 248 | 10 | 265 | 3.75e-46 | 159 |
MS.gene06753.t1 | AT5G24110 | 40.625 | 224 | 97 | 8 | 5 | 223 | 14 | 206 | 1.97e-43 | 152 |
MS.gene06753.t1 | AT4G11070 | 33.431 | 341 | 153 | 12 | 3 | 336 | 7 | 280 | 4.67e-40 | 142 |
MS.gene06753.t1 | AT2G46400 | 30.631 | 333 | 162 | 12 | 1 | 319 | 2 | 279 | 1.29e-31 | 120 |
MS.gene06753.t1 | AT2G40750 | 32.000 | 225 | 118 | 8 | 5 | 207 | 13 | 224 | 3.33e-25 | 104 |
MS.gene06753.t1 | AT3G56400 | 35.602 | 191 | 96 | 7 | 7 | 192 | 11 | 179 | 4.77e-25 | 103 |
MS.gene06753.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 171 | 232 | 5.30e-22 | 94.7 |
MS.gene06753.t1 | AT2G40740 | 59.677 | 62 | 25 | 0 | 131 | 192 | 180 | 241 | 7.46e-22 | 94.4 |
MS.gene06753.t1 | AT5G01900 | 28.846 | 208 | 123 | 5 | 5 | 211 | 6 | 189 | 4.71e-17 | 80.1 |
MS.gene06753.t1 | AT5G45260 | 48.780 | 82 | 39 | 2 | 112 | 190 | 1184 | 1265 | 7.07e-17 | 82.4 |
MS.gene06753.t1 | AT1G66550 | 28.125 | 192 | 97 | 4 | 8 | 192 | 10 | 167 | 1.56e-16 | 78.6 |
MS.gene06753.t1 | AT1G66550 | 29.730 | 185 | 98 | 4 | 8 | 192 | 10 | 162 | 1.65e-16 | 78.6 |
MS.gene06753.t1 | AT2G23320 | 46.667 | 90 | 38 | 5 | 104 | 190 | 213 | 295 | 5.79e-16 | 77.8 |
MS.gene06753.t1 | AT1G66600 | 29.557 | 203 | 104 | 5 | 8 | 205 | 10 | 178 | 7.64e-16 | 76.3 |
MS.gene06753.t1 | AT5G52830 | 60.345 | 58 | 21 | 1 | 134 | 191 | 166 | 221 | 8.03e-16 | 77.8 |
MS.gene06753.t1 | AT1G29280 | 56.667 | 60 | 24 | 1 | 131 | 190 | 72 | 129 | 1.20e-15 | 76.3 |
MS.gene06753.t1 | AT5G41570 | 47.297 | 74 | 34 | 2 | 132 | 203 | 97 | 167 | 1.20e-15 | 74.3 |
MS.gene06753.t1 | AT5G49520 | 53.333 | 60 | 25 | 1 | 132 | 191 | 220 | 276 | 1.64e-15 | 77.4 |
MS.gene06753.t1 | AT1G64000 | 39.806 | 103 | 51 | 4 | 104 | 203 | 89 | 183 | 2.19e-15 | 73.9 |
MS.gene06753.t1 | AT4G01250 | 52.308 | 65 | 29 | 1 | 126 | 190 | 121 | 183 | 2.38e-15 | 75.9 |
MS.gene06753.t1 | AT2G46130 | 45.946 | 74 | 35 | 2 | 132 | 203 | 29 | 99 | 3.94e-15 | 70.9 |
MS.gene06753.t1 | AT4G24240 | 40.187 | 107 | 60 | 3 | 84 | 190 | 234 | 336 | 4.06e-15 | 75.9 |
MS.gene06753.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 247 | 301 | 4.64e-15 | 75.5 |
MS.gene06753.t1 | AT4G31550 | 56.140 | 57 | 23 | 1 | 134 | 190 | 246 | 300 | 4.87e-15 | 75.5 |
MS.gene06753.t1 | AT2G03340 | 33.548 | 155 | 85 | 7 | 45 | 190 | 158 | 303 | 1.53e-14 | 74.7 |
MS.gene06753.t1 | AT2G03340 | 31.655 | 139 | 82 | 3 | 92 | 220 | 364 | 499 | 4.23e-12 | 67.4 |
MS.gene06753.t1 | AT4G26440 | 53.846 | 65 | 26 | 2 | 126 | 190 | 171 | 231 | 1.65e-14 | 74.7 |
MS.gene06753.t1 | AT4G26440 | 47.619 | 63 | 30 | 1 | 132 | 194 | 371 | 430 | 1.60e-11 | 65.9 |
MS.gene06753.t1 | AT2G30590 | 43.617 | 94 | 42 | 5 | 100 | 190 | 283 | 368 | 1.83e-14 | 73.9 |
MS.gene06753.t1 | AT4G23550 | 50.000 | 70 | 33 | 1 | 121 | 190 | 128 | 195 | 2.26e-14 | 73.2 |
MS.gene06753.t1 | AT2G24570 | 56.140 | 57 | 23 | 1 | 134 | 190 | 244 | 298 | 2.58e-14 | 73.2 |
MS.gene06753.t1 | AT2G44745 | 52.542 | 59 | 25 | 1 | 132 | 190 | 144 | 199 | 2.62e-14 | 71.6 |
MS.gene06753.t1 | AT5G28650 | 56.140 | 57 | 23 | 1 | 134 | 190 | 263 | 317 | 2.93e-14 | 73.2 |
MS.gene06753.t1 | AT5G07100 | 41.053 | 95 | 47 | 3 | 115 | 203 | 210 | 301 | 3.46e-14 | 72.8 |
MS.gene06753.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 117 | 171 | 1.19e-11 | 65.1 |
MS.gene06753.t1 | AT5G07100 | 41.053 | 95 | 47 | 3 | 115 | 203 | 117 | 208 | 3.75e-14 | 71.2 |
MS.gene06753.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.27e-11 | 63.9 |
MS.gene06753.t1 | AT5G07100 | 41.053 | 95 | 47 | 3 | 115 | 203 | 117 | 208 | 3.75e-14 | 71.2 |
MS.gene06753.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.27e-11 | 63.9 |
MS.gene06753.t1 | AT5G07100 | 41.053 | 95 | 47 | 3 | 115 | 203 | 117 | 208 | 3.75e-14 | 71.2 |
MS.gene06753.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.27e-11 | 63.9 |
MS.gene06753.t1 | AT5G07100 | 41.053 | 95 | 47 | 3 | 115 | 203 | 117 | 208 | 3.75e-14 | 71.2 |
MS.gene06753.t1 | AT5G07100 | 46.552 | 58 | 28 | 1 | 133 | 190 | 24 | 78 | 1.27e-11 | 63.9 |
MS.gene06753.t1 | AT4G04450 | 50.000 | 74 | 34 | 2 | 118 | 190 | 182 | 253 | 9.17e-14 | 72.4 |
MS.gene06753.t1 | AT5G22570 | 46.154 | 65 | 35 | 0 | 134 | 198 | 111 | 175 | 1.00e-13 | 71.2 |
MS.gene06753.t1 | AT4G18170 | 46.377 | 69 | 34 | 1 | 132 | 200 | 171 | 236 | 1.12e-13 | 71.2 |
MS.gene06753.t1 | AT3G04670 | 54.386 | 57 | 24 | 1 | 134 | 190 | 263 | 317 | 1.22e-13 | 71.2 |
MS.gene06753.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 69 | 126 | 1.33e-13 | 70.5 |
MS.gene06753.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 216 | 270 | 1.37e-13 | 71.6 |
MS.gene06753.t1 | AT3G58710 | 55.000 | 60 | 25 | 1 | 131 | 190 | 68 | 125 | 1.39e-13 | 70.5 |
MS.gene06753.t1 | AT2G34830 | 56.140 | 57 | 23 | 1 | 134 | 190 | 225 | 279 | 1.43e-13 | 71.6 |
MS.gene06753.t1 | AT4G04450 | 50.000 | 74 | 34 | 2 | 118 | 190 | 276 | 347 | 1.75e-13 | 71.6 |
MS.gene06753.t1 | AT5G26170 | 49.153 | 59 | 27 | 1 | 132 | 190 | 112 | 167 | 2.05e-13 | 68.2 |
MS.gene06753.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 338 | 403 | 2.26e-13 | 71.2 |
MS.gene06753.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 258 | 323 | 2.33e-13 | 70.5 |
MS.gene06753.t1 | AT2G37260 | 46.377 | 69 | 34 | 1 | 122 | 190 | 256 | 321 | 2.37e-13 | 70.5 |
MS.gene06753.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 205 | 282 | 2.78e-13 | 70.9 |
MS.gene06753.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 408 | 463 | 2.00e-12 | 68.6 |
MS.gene06753.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 3.21e-13 | 70.1 |
MS.gene06753.t1 | AT1G13960 | 42.169 | 83 | 43 | 3 | 108 | 190 | 52 | 129 | 4.18e-13 | 70.1 |
MS.gene06753.t1 | AT1G13960 | 49.153 | 59 | 27 | 1 | 132 | 190 | 255 | 310 | 2.48e-12 | 67.8 |
MS.gene06753.t1 | AT1G29860 | 46.377 | 69 | 34 | 1 | 132 | 200 | 135 | 200 | 5.19e-13 | 68.9 |
MS.gene06753.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 203 | 258 | 6.25e-13 | 69.7 |
MS.gene06753.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 311 | 398 | 1.53e-11 | 65.5 |
MS.gene06753.t1 | AT3G01080 | 53.333 | 60 | 24 | 2 | 131 | 190 | 165 | 220 | 6.66e-13 | 69.7 |
MS.gene06753.t1 | AT3G01080 | 39.560 | 91 | 47 | 2 | 105 | 190 | 273 | 360 | 1.52e-11 | 65.5 |
MS.gene06753.t1 | AT4G01720 | 54.237 | 59 | 25 | 1 | 132 | 190 | 238 | 294 | 7.82e-13 | 69.7 |
MS.gene06753.t1 | AT1G80590 | 43.939 | 66 | 37 | 0 | 134 | 199 | 86 | 151 | 8.91e-13 | 67.4 |
MS.gene06753.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.05e-12 | 68.2 |
MS.gene06753.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.05e-12 | 68.2 |
MS.gene06753.t1 | AT1G69310 | 49.153 | 59 | 27 | 1 | 132 | 190 | 146 | 201 | 1.05e-12 | 68.2 |
MS.gene06753.t1 | AT1G66560 | 45.000 | 60 | 33 | 0 | 133 | 192 | 103 | 162 | 1.06e-12 | 67.4 |
MS.gene06753.t1 | AT1G30650 | 56.140 | 57 | 23 | 1 | 134 | 190 | 218 | 272 | 1.06e-12 | 68.9 |
MS.gene06753.t1 | AT5G46350 | 45.455 | 66 | 33 | 1 | 132 | 197 | 182 | 244 | 2.20e-12 | 67.4 |
MS.gene06753.t1 | AT1G62300 | 47.297 | 74 | 36 | 2 | 118 | 190 | 296 | 367 | 2.58e-12 | 68.2 |
MS.gene06753.t1 | AT5G56270 | 49.231 | 65 | 29 | 2 | 126 | 190 | 266 | 326 | 2.72e-12 | 68.2 |
MS.gene06753.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.79e-12 | 65.9 |
MS.gene06753.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 102 | 161 | 2.79e-12 | 65.9 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 340 | 395 | 3.55e-12 | 67.8 |
MS.gene06753.t1 | AT4G26640 | 50.000 | 58 | 25 | 2 | 133 | 190 | 171 | 224 | 8.54e-11 | 63.5 |
MS.gene06753.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 124 | 183 | 3.67e-12 | 65.9 |
MS.gene06753.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 282 | 337 | 3.83e-12 | 67.4 |
MS.gene06753.t1 | AT2G25000 | 50.000 | 62 | 29 | 1 | 132 | 193 | 145 | 204 | 3.93e-12 | 66.2 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 380 | 435 | 4.05e-12 | 67.4 |
MS.gene06753.t1 | AT4G26640 | 50.000 | 58 | 25 | 2 | 133 | 190 | 211 | 264 | 9.52e-11 | 63.2 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 308 | 363 | 4.44e-12 | 67.4 |
MS.gene06753.t1 | AT2G04880 | 49.153 | 59 | 27 | 1 | 132 | 190 | 306 | 361 | 4.83e-12 | 67.0 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.47e-12 | 66.6 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.47e-12 | 66.6 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.47e-12 | 66.6 |
MS.gene06753.t1 | AT4G26640 | 49.153 | 59 | 27 | 1 | 132 | 190 | 204 | 259 | 5.47e-12 | 66.6 |
MS.gene06753.t1 | AT5G13080 | 50.000 | 60 | 27 | 1 | 132 | 191 | 66 | 122 | 6.81e-12 | 63.2 |
MS.gene06753.t1 | AT4G39410 | 49.153 | 59 | 27 | 1 | 132 | 190 | 222 | 277 | 6.95e-12 | 65.9 |
MS.gene06753.t1 | AT3G01970 | 50.000 | 60 | 27 | 1 | 132 | 191 | 64 | 120 | 7.61e-12 | 62.8 |
MS.gene06753.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.85e-12 | 66.6 |
MS.gene06753.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.85e-12 | 66.6 |
MS.gene06753.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.85e-12 | 66.6 |
MS.gene06753.t1 | AT4G22070 | 52.542 | 59 | 26 | 1 | 132 | 190 | 296 | 352 | 8.85e-12 | 66.6 |
MS.gene06753.t1 | AT2G47260 | 48.333 | 60 | 28 | 1 | 132 | 191 | 173 | 229 | 1.26e-11 | 65.5 |
MS.gene06753.t1 | AT3G62340 | 50.000 | 60 | 27 | 1 | 132 | 191 | 117 | 173 | 1.77e-11 | 64.3 |
MS.gene06753.t1 | AT5G43290 | 49.180 | 61 | 28 | 1 | 130 | 190 | 111 | 168 | 1.93e-11 | 64.3 |
MS.gene06753.t1 | AT1G18860 | 45.000 | 80 | 41 | 2 | 112 | 190 | 217 | 294 | 2.08e-11 | 65.5 |
MS.gene06753.t1 | AT2G38470 | 47.458 | 59 | 28 | 1 | 132 | 190 | 361 | 416 | 2.85e-11 | 64.7 |
MS.gene06753.t1 | AT1G68150 | 44.304 | 79 | 39 | 3 | 132 | 207 | 234 | 310 | 3.66e-11 | 64.3 |
MS.gene06753.t1 | AT5G64810 | 40.299 | 67 | 37 | 1 | 132 | 198 | 109 | 172 | 6.70e-11 | 61.2 |
MS.gene06753.t1 | AT2G40740 | 57.500 | 40 | 17 | 0 | 153 | 192 | 149 | 188 | 8.38e-11 | 62.0 |
Find 75 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATAATCTCACTTGCCATATT+TGG | 0.088426 | 3.3:-75841004 | None:intergenic |
CAAATTTACATACCTCTTTC+TGG | 0.143241 | 3.3:-75840062 | None:intergenic |
CCGTAAAAGACATGTTAATA+TGG | 0.191166 | 3.3:+75839907 | MS.gene06753:CDS |
TTTGATCAATTTGAATTTGA+TGG | 0.254177 | 3.3:+75841079 | MS.gene06753:CDS |
TGTTAACAATATTTGTTTCT+TGG | 0.254224 | 3.3:-75840745 | None:intergenic |
TATGTTTCCCCTGCAAATTC+AGG | 0.272093 | 3.3:+75840941 | MS.gene06753:CDS |
ATGGAACAAATGATTGGTTT+AGG | 0.306745 | 3.3:-75840865 | None:intergenic |
AAACACACCAACTGCTTCTA+TGG | 0.316690 | 3.3:+75841048 | MS.gene06753:CDS |
AATCTCACGTGTTTCATTAG+AGG | 0.318717 | 3.3:-75839834 | None:intergenic |
GTTAACAATATTTGTTTCTT+GGG | 0.321184 | 3.3:-75840744 | None:intergenic |
ATGATTGGTTTAGGAAATCT+AGG | 0.323422 | 3.3:-75840856 | None:intergenic |
GGACCTTCCACTGCCATTCC+TGG | 0.341337 | 3.3:-75840389 | None:intergenic |
TGACTTATTCCTGAATTTGC+AGG | 0.343271 | 3.3:-75840950 | None:intergenic |
GGAACACTCTACCAATTAGA+TGG | 0.350756 | 3.3:+75840345 | MS.gene06753:intron |
TAATCTCACTTGCCATATTT+GGG | 0.350967 | 3.3:-75841003 | None:intergenic |
TTTGTTTCTTGGGTTTGAAA+TGG | 0.354628 | 3.3:-75840734 | None:intergenic |
TTTCAAATGGAACAAATGAT+TGG | 0.363750 | 3.3:-75840871 | None:intergenic |
GGGTATAGTTGGAGAAAATA+TGG | 0.366566 | 3.3:+75840422 | MS.gene06753:CDS |
ATTTGAAAAGGCACTTGAAA+TGG | 0.370230 | 3.3:+75839880 | MS.gene06753:CDS |
TCAAATTCAAATTGATCAAA+TGG | 0.396441 | 3.3:-75841076 | None:intergenic |
TAGAAACGTTCTAGGATGTT+TGG | 0.398748 | 3.3:+75840598 | MS.gene06753:CDS |
TTCAAAAGTTGTTCATTTGG+TGG | 0.409814 | 3.3:-75840797 | None:intergenic |
CAAAGCTACTTTCAAGTACA+TGG | 0.413007 | 3.3:-75840895 | None:intergenic |
TTGTTCAAAAGTTGTTCATT+TGG | 0.416222 | 3.3:-75840800 | None:intergenic |
TGCAGTCATAGAAACGTTCT+AGG | 0.419203 | 3.3:+75840590 | MS.gene06753:CDS |
AGTTGTGGAATGTGAAGTTT+TGG | 0.442534 | 3.3:-75841102 | None:intergenic |
CTGAGGCTGAAGGGTATTGT+TGG | 0.449383 | 3.3:-75839943 | None:intergenic |
TATGTGATTTCAAAGATAGT+TGG | 0.452782 | 3.3:-75840653 | None:intergenic |
CGTAAAAGACATGTTAATAT+GGG | 0.457646 | 3.3:+75839908 | MS.gene06753:CDS |
TGAAATGGATTAGTTAATGT+TGG | 0.458156 | 3.3:-75840719 | None:intergenic |
CTCTTGATGATGGGTATAGT+TGG | 0.464883 | 3.3:+75840411 | MS.gene06753:CDS |
AAGGTGGCGAATCTGATATT+CGG | 0.465518 | 3.3:-75839979 | None:intergenic |
TTTGTTGATCAAGGCTTTGA+GGG | 0.467796 | 3.3:-75840772 | None:intergenic |
TTTGGGAAAACACTTGGAGT+TGG | 0.470835 | 3.3:-75840986 | None:intergenic |
AATTATATCCACATTTGAAA+AGG | 0.478087 | 3.3:+75839868 | MS.gene06753:CDS |
AGATAAGCTACTACAAGGAT+TGG | 0.478321 | 3.3:+75839769 | MS.gene06753:CDS |
GTGGAAGGTCCTCTTGATGA+TGG | 0.481430 | 3.3:+75840401 | MS.gene06753:CDS |
TTCTGGAAGCATTGTGATCA+CGG | 0.489343 | 3.3:-75840045 | None:intergenic |
ATGTGATTTCAAAGATAGTT+GGG | 0.493028 | 3.3:-75840652 | None:intergenic |
CAACAATACCCTTCAGCCTC+AGG | 0.495514 | 3.3:+75839944 | MS.gene06753:CDS |
GCCATATTTGGGAAAACACT+TGG | 0.500966 | 3.3:-75840992 | None:intergenic |
ATCACAATGCTTCCAGAAAG+AGG | 0.506811 | 3.3:+75840050 | MS.gene06753:CDS |
GACTTATTCCTGAATTTGCA+GGG | 0.514420 | 3.3:-75840949 | None:intergenic |
ACCTTGGATGCACGGCTCCA+AGG | 0.515275 | 3.3:-75840457 | None:intergenic |
TCCTTGGAGCCGTGCATCCA+AGG | 0.519224 | 3.3:+75840456 | MS.gene06753:CDS |
CTGTCGGAGTCTTCACTTCG+CGG | 0.524147 | 3.3:-75840013 | None:intergenic |
TTGTGCATGTGTGGTTTCCT+CGG | 0.524687 | 3.3:-75840676 | None:intergenic |
TATGGTCAGAAAGACATCCT+TGG | 0.530226 | 3.3:+75840440 | MS.gene06753:CDS |
GCAAGTGTTCCTGAGGCTGA+AGG | 0.534387 | 3.3:-75839953 | None:intergenic |
GTGTTTGCAGCAGAAGTAGC+TGG | 0.543085 | 3.3:-75841031 | None:intergenic |
CAAGTGTTCCTGAGGCTGAA+GGG | 0.573717 | 3.3:-75839952 | None:intergenic |
GCTACTACAAGGATTGGAGT+TGG | 0.576309 | 3.3:+75839775 | MS.gene06753:CDS |
AATTATATACCTTGGATGCA+CGG | 0.579367 | 3.3:-75840465 | None:intergenic |
TGGAAGGTCCTCTTGATGAT+GGG | 0.583275 | 3.3:+75840402 | MS.gene06753:CDS |
TATTCGAGTTGAACCAGGAA+TGG | 0.589228 | 3.3:+75840376 | MS.gene06753:CDS |
AGTTGAACCAGGAATGGCAG+TGG | 0.591297 | 3.3:+75840382 | MS.gene06753:CDS |
TTTGCAGGGGAAACATATGA+AGG | 0.596062 | 3.3:-75840935 | None:intergenic |
ATCACGGTTAAAATCTCTGT+CGG | 0.596477 | 3.3:-75840029 | None:intergenic |
GAACCAGGAATGGCAGTGGA+AGG | 0.596663 | 3.3:+75840386 | MS.gene06753:CDS |
TTAATAGATAAGCTACTACA+AGG | 0.612960 | 3.3:+75839764 | MS.gene06753:CDS |
AAACATATTCGAGTTGAACC+AGG | 0.613692 | 3.3:+75840371 | MS.gene06753:CDS |
GAACTCTTAGACCTGTTCGT+AGG | 0.617613 | 3.3:-75840823 | None:intergenic |
CTTCGCGGACTACAGCTCAA+AGG | 0.617709 | 3.3:-75839998 | None:intergenic |
TAATGTTGGACCAACCACAT+TGG | 0.618042 | 3.3:-75840705 | None:intergenic |
CAACTATACCCATCATCAAG+AGG | 0.622097 | 3.3:-75840410 | None:intergenic |
GGAAACTCCATAGAAGCAGT+TGG | 0.622336 | 3.3:-75841055 | None:intergenic |
TGGAAGCAATTGTGCATGTG+TGG | 0.623042 | 3.3:-75840685 | None:intergenic |
ACAATTGCTTCCAATGTGGT+TGG | 0.627124 | 3.3:+75840695 | MS.gene06753:CDS |
TGGCGAATCTGATATTCGGA+TGG | 0.634201 | 3.3:-75839975 | None:intergenic |
ATCTTTGAAATCACATACCG+AGG | 0.643767 | 3.3:+75840659 | MS.gene06753:CDS |
CGCGGACTACAGCTCAAAGG+TGG | 0.645554 | 3.3:-75839995 | None:intergenic |
TCGGATGGCAAGTGTTCCTG+AGG | 0.646934 | 3.3:-75839960 | None:intergenic |
ACTTATTCCTGAATTTGCAG+GGG | 0.668793 | 3.3:-75840948 | None:intergenic |
ATGCACAATTGCTTCCAATG+TGG | 0.717502 | 3.3:+75840691 | MS.gene06753:CDS |
TTTGCAGCAGAAGTAGCTGG+TGG | 0.728180 | 3.3:-75841028 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATATTTATTTATTTT+AGG | + | chr3.3:75840324-75840343 | MS.gene06753:intron | 0.0% |
!! | AATTATATCCACATTTGAAA+AGG | + | chr3.3:75839868-75839887 | MS.gene06753:CDS | 20.0% |
!! | AATTGAGAAATTATATACCT+TGG | - | chr3.3:75840476-75840495 | None:intergenic | 20.0% |
!! | TAAATATAAAAACTAGGGTA+AGG | - | chr3.3:75840316-75840335 | None:intergenic | 20.0% |
!! | TCAAATTCAAATTGATCAAA+TGG | - | chr3.3:75841079-75841098 | None:intergenic | 20.0% |
!! | TTGTATTATTAAGAATAACC+CGG | - | chr3.3:75840247-75840266 | None:intergenic | 20.0% |
!! | TTTGATCAATTTGAATTTGA+TGG | + | chr3.3:75841079-75841098 | MS.gene06753:CDS | 20.0% |
!!! | AGTTTTTTTTTTAATACCGT+AGG | + | chr3.3:75840149-75840168 | MS.gene06753:intron | 20.0% |
!!! | GTTAACAATATTTGTTTCTT+GGG | - | chr3.3:75840747-75840766 | None:intergenic | 20.0% |
!!! | GTTTTTTTTTTAATACCGTA+GGG | + | chr3.3:75840150-75840169 | MS.gene06753:intron | 20.0% |
!!! | TGTTAACAATATTTGTTTCT+TGG | - | chr3.3:75840748-75840767 | None:intergenic | 20.0% |
! | ATGTGATTTCAAAGATAGTT+GGG | - | chr3.3:75840655-75840674 | None:intergenic | 25.0% |
! | CGTAAAAGACATGTTAATAT+GGG | + | chr3.3:75839908-75839927 | MS.gene06753:CDS | 25.0% |
! | TATGTGATTTCAAAGATAGT+TGG | - | chr3.3:75840656-75840675 | None:intergenic | 25.0% |
! | TGTATTATTAAGAATAACCC+GGG | - | chr3.3:75840246-75840265 | None:intergenic | 25.0% |
! | TTAATAGATAAGCTACTACA+AGG | + | chr3.3:75839764-75839783 | MS.gene06753:CDS | 25.0% |
! | TTGAAGTTGAAGTAACTATA+TGG | + | chr3.3:75840520-75840539 | MS.gene06753:intron | 25.0% |
! | TTGTTCAAAAGTTGTTCATT+TGG | - | chr3.3:75840803-75840822 | None:intergenic | 25.0% |
! | TTTCAAATGGAACAAATGAT+TGG | - | chr3.3:75840874-75840893 | None:intergenic | 25.0% |
!! | ATATGTTTTGTCCATCTAAT+TGG | - | chr3.3:75840359-75840378 | None:intergenic | 25.0% |
!! | CAAATGTGGATATAATTTTC+TGG | - | chr3.3:75839865-75839884 | None:intergenic | 25.0% |
!! | CCATATTAACATGTCTTTTA+CGG | - | chr3.3:75839910-75839929 | None:intergenic | 25.0% |
!!! | TAAACTTTTTTTATACGACC+CGG | + | chr3.3:75840225-75840244 | MS.gene06753:intron | 25.0% |
!!! | TGAAATGGATTAGTTAATGT+TGG | - | chr3.3:75840722-75840741 | None:intergenic | 25.0% |
AATTATATACCTTGGATGCA+CGG | - | chr3.3:75840468-75840487 | None:intergenic | 30.0% | |
ATAATCTCACTTGCCATATT+TGG | - | chr3.3:75841007-75841026 | None:intergenic | 30.0% | |
CAAATTTACATACCTCTTTC+TGG | - | chr3.3:75840065-75840084 | None:intergenic | 30.0% | |
CCGTAAAAGACATGTTAATA+TGG | + | chr3.3:75839907-75839926 | MS.gene06753:CDS | 30.0% | |
TAATCTCACTTGCCATATTT+GGG | - | chr3.3:75841006-75841025 | None:intergenic | 30.0% | |
TTCAAAAGTTGTTCATTTGG+TGG | - | chr3.3:75840800-75840819 | None:intergenic | 30.0% | |
! | TCAAGTACATGGTTTTCAAA+TGG | - | chr3.3:75840887-75840906 | None:intergenic | 30.0% |
! | TTTGTTTCTTGGGTTTGAAA+TGG | - | chr3.3:75840737-75840756 | None:intergenic | 30.0% |
!! | ATGATTGGTTTAGGAAATCT+AGG | - | chr3.3:75840859-75840878 | None:intergenic | 30.0% |
!! | ATGGAACAAATGATTGGTTT+AGG | - | chr3.3:75840868-75840887 | None:intergenic | 30.0% |
!! | ATTTGAAAAGGCACTTGAAA+TGG | + | chr3.3:75839880-75839899 | MS.gene06753:CDS | 30.0% |
!!! | AAACTTTTTTTATACGACCC+GGG | + | chr3.3:75840226-75840245 | MS.gene06753:intron | 30.0% |
AAGAGAAAAATCGTGAGTTG+TGG | - | chr3.3:75841120-75841139 | None:intergenic | 35.0% | |
AATCTCACGTGTTTCATTAG+AGG | - | chr3.3:75839837-75839856 | None:intergenic | 35.0% | |
ACTTATTCCTGAATTTGCAG+GGG | - | chr3.3:75840951-75840970 | None:intergenic | 35.0% | |
AGATAAGCTACTACAAGGAT+TGG | + | chr3.3:75839769-75839788 | MS.gene06753:CDS | 35.0% | |
ATCACGGTTAAAATCTCTGT+CGG | - | chr3.3:75840032-75840051 | None:intergenic | 35.0% | |
GACTTATTCCTGAATTTGCA+GGG | - | chr3.3:75840952-75840971 | None:intergenic | 35.0% | |
GGGTATAGTTGGAGAAAATA+TGG | + | chr3.3:75840422-75840441 | MS.gene06753:CDS | 35.0% | |
TGACTTATTCCTGAATTTGC+AGG | - | chr3.3:75840953-75840972 | None:intergenic | 35.0% | |
TTGTCGATAAAACTCTCGTT+AGG | + | chr3.3:75840118-75840137 | MS.gene06753:intron | 35.0% | |
! | AGTTGTGGAATGTGAAGTTT+TGG | - | chr3.3:75841105-75841124 | None:intergenic | 35.0% |
! | CAAAGCTACTTTCAAGTACA+TGG | - | chr3.3:75840898-75840917 | None:intergenic | 35.0% |
! | TCCAAGTGTTTTCCCAAATA+TGG | + | chr3.3:75840991-75841010 | MS.gene06753:CDS | 35.0% |
! | TTCAAGTGCCTTTTCAAATG+TGG | - | chr3.3:75839879-75839898 | None:intergenic | 35.0% |
! | TTTGTTGATCAAGGCTTTGA+GGG | - | chr3.3:75840775-75840794 | None:intergenic | 35.0% |
! | TTTTGTTGATCAAGGCTTTG+AGG | - | chr3.3:75840776-75840795 | None:intergenic | 35.0% |
!! | AAACATATTCGAGTTGAACC+AGG | + | chr3.3:75840371-75840390 | MS.gene06753:CDS | 35.0% |
!! | ATCTTTGAAATCACATACCG+AGG | + | chr3.3:75840659-75840678 | MS.gene06753:CDS | 35.0% |
!! | TAGAAACGTTCTAGGATGTT+TGG | + | chr3.3:75840598-75840617 | MS.gene06753:CDS | 35.0% |
!! | TTGGTGGTTTTTGTTGATCA+AGG | - | chr3.3:75840784-75840803 | None:intergenic | 35.0% |
AAACACACCAACTGCTTCTA+TGG | + | chr3.3:75841048-75841067 | MS.gene06753:CDS | 40.0% | |
AAGGTGGCGAATCTGATATT+CGG | - | chr3.3:75839982-75840001 | None:intergenic | 40.0% | |
AATATGGCGAGTGATCTGAA+TGG | + | chr3.3:75840184-75840203 | MS.gene06753:intron | 40.0% | |
ACAATTGCTTCCAATGTGGT+TGG | + | chr3.3:75840695-75840714 | MS.gene06753:CDS | 40.0% | |
ATATGGCGAGTGATCTGAAT+GGG | + | chr3.3:75840185-75840204 | MS.gene06753:intron | 40.0% | |
ATCACAATGCTTCCAGAAAG+AGG | + | chr3.3:75840050-75840069 | MS.gene06753:CDS | 40.0% | |
ATGCACAATTGCTTCCAATG+TGG | + | chr3.3:75840691-75840710 | MS.gene06753:CDS | 40.0% | |
CAACTATACCCATCATCAAG+AGG | - | chr3.3:75840413-75840432 | None:intergenic | 40.0% | |
GCCATATTTGGGAAAACACT+TGG | - | chr3.3:75840995-75841014 | None:intergenic | 40.0% | |
GGAACACTCTACCAATTAGA+TGG | + | chr3.3:75840345-75840364 | MS.gene06753:intron | 40.0% | |
TAATGTTGGACCAACCACAT+TGG | - | chr3.3:75840708-75840727 | None:intergenic | 40.0% | |
TAGGGTGCGCATAGATAATA+TGG | + | chr3.3:75840168-75840187 | MS.gene06753:intron | 40.0% | |
TATGGTCAGAAAGACATCCT+TGG | + | chr3.3:75840440-75840459 | MS.gene06753:CDS | 40.0% | |
TATGTTTCCCCTGCAAATTC+AGG | + | chr3.3:75840941-75840960 | MS.gene06753:CDS | 40.0% | |
TATTATCTATGCGCACCCTA+CGG | - | chr3.3:75840168-75840187 | None:intergenic | 40.0% | |
TGCAGTCATAGAAACGTTCT+AGG | + | chr3.3:75840590-75840609 | MS.gene06753:CDS | 40.0% | |
TTTGCAGGGGAAACATATGA+AGG | - | chr3.3:75840938-75840957 | None:intergenic | 40.0% | |
TTTGGGAAAACACTTGGAGT+TGG | - | chr3.3:75840989-75841008 | None:intergenic | 40.0% | |
! | CTTTTGAACAACCTACGAAC+AGG | + | chr3.3:75840812-75840831 | MS.gene06753:CDS | 40.0% |
!! | CTCTTGATGATGGGTATAGT+TGG | + | chr3.3:75840411-75840430 | MS.gene06753:CDS | 40.0% |
!! | TATTCGAGTTGAACCAGGAA+TGG | + | chr3.3:75840376-75840395 | MS.gene06753:CDS | 40.0% |
!! | TTCTGGAAGCATTGTGATCA+CGG | - | chr3.3:75840048-75840067 | None:intergenic | 40.0% |
GAACTCTTAGACCTGTTCGT+AGG | - | chr3.3:75840826-75840845 | None:intergenic | 45.0% | |
GCTACTACAAGGATTGGAGT+TGG | + | chr3.3:75839775-75839794 | MS.gene06753:CDS | 45.0% | |
GGAAACTCCATAGAAGCAGT+TGG | - | chr3.3:75841058-75841077 | None:intergenic | 45.0% | |
GTGTATGTGTGTGTATGCAG+AGG | + | chr3.3:75840557-75840576 | MS.gene06753:intron | 45.0% | |
TGGAAGCAATTGTGCATGTG+TGG | - | chr3.3:75840688-75840707 | None:intergenic | 45.0% | |
TGGCGAATCTGATATTCGGA+TGG | - | chr3.3:75839978-75839997 | None:intergenic | 45.0% | |
TTGTGCATGTGTGGTTTCCT+CGG | - | chr3.3:75840679-75840698 | None:intergenic | 45.0% | |
! | TGGAAGGTCCTCTTGATGAT+GGG | + | chr3.3:75840402-75840421 | MS.gene06753:CDS | 45.0% |
!! | AATAAATAAATATAAAAACT+AGG | - | chr3.3:75840322-75840341 | None:intergenic | 5.0% |
!! | ATAAATAAATATAAAAACTA+GGG | - | chr3.3:75840321-75840340 | None:intergenic | 5.0% |
AGTTGAACCAGGAATGGCAG+TGG | + | chr3.3:75840382-75840401 | MS.gene06753:CDS | 50.0% | |
CAACAATACCCTTCAGCCTC+AGG | + | chr3.3:75839944-75839963 | MS.gene06753:CDS | 50.0% | |
CAAGTGTTCCTGAGGCTGAA+GGG | - | chr3.3:75839955-75839974 | None:intergenic | 50.0% | |
GTGGAAGGTCCTCTTGATGA+TGG | + | chr3.3:75840401-75840420 | MS.gene06753:CDS | 50.0% | |
GTGTTTGCAGCAGAAGTAGC+TGG | - | chr3.3:75841034-75841053 | None:intergenic | 50.0% | |
TTTGCAGCAGAAGTAGCTGG+TGG | - | chr3.3:75841031-75841050 | None:intergenic | 50.0% | |
!! | CTGAGGCTGAAGGGTATTGT+TGG | - | chr3.3:75839946-75839965 | None:intergenic | 50.0% |
CTGTCGGAGTCTTCACTTCG+CGG | - | chr3.3:75840016-75840035 | None:intergenic | 55.0% | |
GAACCAGGAATGGCAGTGGA+AGG | + | chr3.3:75840386-75840405 | MS.gene06753:CDS | 55.0% | |
GCAAGTGTTCCTGAGGCTGA+AGG | - | chr3.3:75839956-75839975 | None:intergenic | 55.0% | |
TCGGATGGCAAGTGTTCCTG+AGG | - | chr3.3:75839963-75839982 | None:intergenic | 55.0% | |
! | CTTCGCGGACTACAGCTCAA+AGG | - | chr3.3:75840001-75840020 | None:intergenic | 55.0% |
ACCTTGGATGCACGGCTCCA+AGG | - | chr3.3:75840460-75840479 | None:intergenic | 60.0% | |
GGACCTTCCACTGCCATTCC+TGG | - | chr3.3:75840392-75840411 | None:intergenic | 60.0% | |
TCCTTGGAGCCGTGCATCCA+AGG | + | chr3.3:75840456-75840475 | MS.gene06753:CDS | 60.0% | |
! | CGCGGACTACAGCTCAAAGG+TGG | - | chr3.3:75839998-75840017 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 75839746 | 75841141 | 75839746 | ID=MS.gene06753 |
chr3.3 | mRNA | 75839746 | 75841141 | 75839746 | ID=MS.gene06753.t1;Parent=MS.gene06753 |
chr3.3 | exon | 75839746 | 75840071 | 75839746 | ID=MS.gene06753.t1.exon1;Parent=MS.gene06753.t1 |
chr3.3 | CDS | 75839746 | 75840071 | 75839746 | ID=cds.MS.gene06753.t1;Parent=MS.gene06753.t1 |
chr3.3 | exon | 75840346 | 75840477 | 75840346 | ID=MS.gene06753.t1.exon2;Parent=MS.gene06753.t1 |
chr3.3 | CDS | 75840346 | 75840477 | 75840346 | ID=cds.MS.gene06753.t1;Parent=MS.gene06753.t1 |
chr3.3 | exon | 75840577 | 75841141 | 75840577 | ID=MS.gene06753.t1.exon3;Parent=MS.gene06753.t1 |
chr3.3 | CDS | 75840577 | 75841141 | 75840577 | ID=cds.MS.gene06753.t1;Parent=MS.gene06753.t1 |
Gene Sequence |
Protein sequence |