Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067642.t1 | XP_003605494.2 | 79.8 | 242 | 36 | 1 | 4 | 245 | 3 | 231 | 3.70E-101 | 377.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067642.t1 | Q9FJK3 | 46.6 | 193 | 101 | 2 | 4 | 196 | 3 | 193 | 2.4e-37 | 157.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067642.t1 | G7JN54 | 79.8 | 242 | 36 | 1 | 4 | 245 | 3 | 231 | 2.6e-101 | 377.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene067642.t1 | TF | MADS-M-type |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067642.t1 | MTR_4g031910 | 82.645 | 242 | 27 | 1 | 4 | 245 | 3 | 229 | 1.63e-136 | 383 |
MS.gene067642.t1 | MTR_4g032290 | 79.752 | 242 | 36 | 1 | 4 | 245 | 3 | 231 | 5.94e-131 | 369 |
MS.gene067642.t1 | MTR_8g036130 | 61.753 | 251 | 81 | 5 | 4 | 245 | 3 | 247 | 4.49e-99 | 289 |
MS.gene067642.t1 | MTR_4g032620 | 58.776 | 245 | 87 | 4 | 1 | 245 | 1 | 231 | 9.83e-96 | 280 |
MS.gene067642.t1 | MTR_4g032260 | 80.519 | 154 | 30 | 0 | 4 | 157 | 3 | 156 | 2.42e-80 | 238 |
MS.gene067642.t1 | MTR_3g065100 | 48.133 | 241 | 118 | 4 | 4 | 242 | 3 | 238 | 7.88e-63 | 197 |
MS.gene067642.t1 | MTR_3g466980 | 52.047 | 171 | 74 | 3 | 4 | 173 | 3 | 166 | 1.12e-57 | 183 |
MS.gene067642.t1 | MTR_4g032270 | 72.727 | 110 | 16 | 1 | 136 | 245 | 36 | 131 | 1.05e-50 | 162 |
MS.gene067642.t1 | MTR_2g035610 | 72.500 | 120 | 33 | 0 | 4 | 123 | 3 | 122 | 1.47e-49 | 159 |
MS.gene067642.t1 | MTR_3g466830 | 44.720 | 161 | 88 | 1 | 4 | 164 | 2 | 161 | 5.63e-44 | 146 |
MS.gene067642.t1 | MTR_5g075380 | 45.333 | 150 | 81 | 1 | 6 | 155 | 5 | 153 | 6.93e-42 | 140 |
MS.gene067642.t1 | MTR_4g063790 | 40.491 | 163 | 97 | 0 | 4 | 166 | 3 | 165 | 2.20e-41 | 139 |
MS.gene067642.t1 | MTR_3g466890 | 42.138 | 159 | 91 | 1 | 4 | 162 | 2 | 159 | 2.00e-39 | 134 |
MS.gene067642.t1 | MTR_2g016210 | 42.105 | 152 | 88 | 0 | 6 | 157 | 5 | 156 | 4.92e-39 | 135 |
MS.gene067642.t1 | MTR_5g047580 | 44.805 | 154 | 83 | 2 | 4 | 157 | 3 | 154 | 3.85e-38 | 130 |
MS.gene067642.t1 | MTR_3g031100 | 41.401 | 157 | 91 | 1 | 1 | 157 | 1 | 156 | 6.25e-38 | 133 |
MS.gene067642.t1 | MTR_3g467080 | 39.610 | 154 | 93 | 0 | 4 | 157 | 3 | 156 | 2.27e-37 | 129 |
MS.gene067642.t1 | MTR_1g077390 | 40.260 | 154 | 90 | 2 | 4 | 157 | 3 | 154 | 2.19e-34 | 121 |
MS.gene067642.t1 | MTR_1g090783 | 39.610 | 154 | 91 | 2 | 4 | 157 | 2 | 153 | 2.53e-34 | 121 |
MS.gene067642.t1 | MTR_1g090710 | 39.623 | 159 | 94 | 2 | 1 | 159 | 1 | 157 | 1.26e-33 | 119 |
MS.gene067642.t1 | MTR_1g090697 | 39.744 | 156 | 92 | 2 | 4 | 159 | 3 | 156 | 6.35e-33 | 117 |
MS.gene067642.t1 | MTR_3g465410 | 39.416 | 137 | 83 | 0 | 30 | 166 | 1 | 137 | 3.20e-32 | 115 |
MS.gene067642.t1 | MTR_1g077320 | 42.857 | 154 | 86 | 2 | 4 | 157 | 3 | 154 | 1.01e-31 | 114 |
MS.gene067642.t1 | MTR_7g011950 | 42.857 | 154 | 86 | 2 | 4 | 157 | 3 | 154 | 1.05e-31 | 114 |
MS.gene067642.t1 | MTR_1g084950 | 43.506 | 154 | 85 | 2 | 4 | 157 | 3 | 154 | 3.02e-31 | 113 |
MS.gene067642.t1 | MTR_4g028800 | 78.788 | 66 | 12 | 1 | 6 | 71 | 5 | 68 | 1.16e-30 | 108 |
MS.gene067642.t1 | MTR_4g028720 | 41.558 | 154 | 88 | 2 | 4 | 157 | 3 | 154 | 4.48e-30 | 110 |
MS.gene067642.t1 | MTR_1g077300 | 42.138 | 159 | 88 | 2 | 4 | 162 | 3 | 157 | 5.88e-29 | 107 |
MS.gene067642.t1 | MTR_3g466900 | 38.462 | 130 | 79 | 1 | 33 | 162 | 2 | 130 | 1.43e-28 | 105 |
MS.gene067642.t1 | MTR_3g031240 | 33.333 | 159 | 105 | 1 | 1 | 159 | 1 | 158 | 1.84e-28 | 107 |
MS.gene067642.t1 | MTR_7g055800 | 49.573 | 117 | 31 | 2 | 4 | 120 | 3 | 91 | 1.34e-27 | 101 |
MS.gene067642.t1 | MTR_7g106510 | 38.462 | 156 | 80 | 2 | 3 | 158 | 5 | 144 | 1.30e-26 | 107 |
MS.gene067642.t1 | MTR_4g019670 | 39.103 | 156 | 79 | 2 | 3 | 158 | 5 | 144 | 1.50e-26 | 107 |
MS.gene067642.t1 | MTR_3g466930 | 36.154 | 130 | 82 | 1 | 33 | 162 | 2 | 130 | 1.83e-26 | 100 |
MS.gene067642.t1 | MTR_3g093900 | 29.534 | 193 | 125 | 2 | 3 | 195 | 5 | 186 | 1.08e-25 | 105 |
MS.gene067642.t1 | MTR_7g055790 | 53.211 | 109 | 33 | 1 | 4 | 112 | 61 | 151 | 9.02e-25 | 96.3 |
MS.gene067642.t1 | MTR_2g035590 | 57.732 | 97 | 40 | 1 | 75 | 170 | 1 | 97 | 2.76e-23 | 90.9 |
MS.gene067642.t1 | MTR_2g035580 | 34.437 | 151 | 98 | 1 | 7 | 157 | 6 | 155 | 5.74e-23 | 91.7 |
MS.gene067642.t1 | MTR_7g055940 | 49.038 | 104 | 25 | 2 | 4 | 107 | 3 | 78 | 9.51e-23 | 89.0 |
MS.gene067642.t1 | MTR_5g047560 | 41.739 | 115 | 50 | 2 | 4 | 118 | 3 | 100 | 2.62e-20 | 84.3 |
MS.gene067642.t1 | MTR_6g018920 | 32.432 | 111 | 68 | 4 | 4 | 108 | 3 | 112 | 5.02e-12 | 65.1 |
MS.gene067642.t1 | MTR_6g005450 | 35.965 | 114 | 65 | 5 | 1 | 108 | 1 | 112 | 5.81e-12 | 64.7 |
MS.gene067642.t1 | MTR_1g114730 | 32.432 | 111 | 68 | 3 | 4 | 108 | 3 | 112 | 1.34e-11 | 63.9 |
MS.gene067642.t1 | MTR_4g084780 | 55.769 | 52 | 23 | 0 | 75 | 126 | 1 | 52 | 8.36e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067642.t1 | AT5G48670 | 52.532 | 158 | 74 | 1 | 4 | 161 | 3 | 159 | 1.19e-44 | 152 |
MS.gene067642.t1 | AT1G65300 | 40.217 | 184 | 96 | 3 | 4 | 187 | 2 | 171 | 7.80e-41 | 141 |
MS.gene067642.t1 | AT1G65330 | 40.541 | 185 | 96 | 2 | 4 | 188 | 2 | 172 | 1.01e-39 | 139 |
MS.gene067642.t1 | AT5G26630 | 40.887 | 203 | 103 | 3 | 4 | 204 | 3 | 190 | 7.64e-37 | 129 |
MS.gene067642.t1 | AT5G26650 | 40.244 | 164 | 97 | 1 | 6 | 169 | 3 | 165 | 2.08e-36 | 132 |
MS.gene067642.t1 | AT5G27960 | 39.634 | 164 | 98 | 1 | 6 | 169 | 3 | 165 | 1.20e-35 | 129 |
MS.gene067642.t1 | AT1G31630 | 35.165 | 182 | 103 | 3 | 4 | 185 | 2 | 168 | 5.90e-35 | 127 |
MS.gene067642.t1 | AT1G31640 | 39.073 | 151 | 90 | 2 | 4 | 154 | 2 | 150 | 7.32e-32 | 121 |
MS.gene067642.t1 | AT3G05860 | 39.189 | 148 | 89 | 1 | 4 | 151 | 3 | 149 | 6.72e-30 | 111 |
MS.gene067642.t1 | AT5G27810 | 53.763 | 93 | 43 | 0 | 30 | 122 | 1 | 93 | 8.22e-30 | 108 |
MS.gene067642.t1 | AT3G05860 | 39.189 | 148 | 89 | 1 | 4 | 151 | 3 | 149 | 2.01e-29 | 111 |
MS.gene067642.t1 | AT3G05860 | 39.189 | 148 | 89 | 1 | 4 | 151 | 3 | 149 | 2.53e-29 | 111 |
MS.gene067642.t1 | AT2G28700 | 36.364 | 165 | 100 | 2 | 4 | 166 | 3 | 164 | 1.35e-27 | 108 |
MS.gene067642.t1 | AT5G26580 | 35.897 | 156 | 84 | 3 | 1 | 156 | 1 | 140 | 2.28e-25 | 102 |
MS.gene067642.t1 | AT1G22590 | 31.847 | 157 | 102 | 2 | 1 | 157 | 1 | 152 | 1.60e-24 | 95.9 |
MS.gene067642.t1 | AT5G06500 | 34.868 | 152 | 97 | 2 | 4 | 155 | 3 | 152 | 3.55e-19 | 84.0 |
MS.gene067642.t1 | AT2G40210 | 39.098 | 133 | 79 | 2 | 4 | 135 | 3 | 134 | 5.01e-17 | 79.7 |
MS.gene067642.t1 | AT5G58890 | 38.583 | 127 | 67 | 5 | 7 | 124 | 6 | 130 | 7.81e-16 | 75.5 |
MS.gene067642.t1 | AT5G55690 | 43.038 | 79 | 37 | 3 | 1 | 72 | 1 | 78 | 2.45e-12 | 65.5 |
MS.gene067642.t1 | AT5G55690 | 43.038 | 79 | 37 | 3 | 1 | 72 | 1 | 78 | 2.45e-12 | 65.5 |
Find 60 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAACAAAGAAAAGAAAAT+AGG | 0.231520 | 4.1:-69088600 | MS.gene067642:CDS |
GAGTGAAGAAATGGCAATTA+TGG | 0.233693 | 4.1:-69088338 | MS.gene067642:CDS |
CCATTTGGTGAGGTCAATTC+TGG | 0.235784 | 4.1:-69088217 | MS.gene067642:CDS |
GTGAGGTCAATTCTGGAGTT+TGG | 0.330469 | 4.1:-69088210 | MS.gene067642:CDS |
AACGAAGGGTCTATTGAAAA+AGG | 0.335070 | 4.1:-69088833 | MS.gene067642:CDS |
ATGAGCCTCAACCTGAGATT+TGG | 0.345571 | 4.1:-69088753 | MS.gene067642:CDS |
ATAATGTCATCATCATTAAT+AGG | 0.375800 | 4.1:+69088295 | None:intergenic |
TCGCCATTTCGAGTTGGACT+TGG | 0.402057 | 4.1:+69088395 | None:intergenic |
TATGCAAAGTCAATTATTGA+TGG | 0.408286 | 4.1:-69088275 | MS.gene067642:CDS |
ATCTCAGGTTGAGGCTCATA+AGG | 0.418788 | 4.1:+69088757 | None:intergenic |
GAAACAAAGAAAAGAAAATA+GGG | 0.419680 | 4.1:-69088599 | MS.gene067642:CDS |
AGTGAAGAAATGGCAATTAT+GGG | 0.424565 | 4.1:-69088337 | MS.gene067642:CDS |
GTTGATTGACCACAATTTGA+AGG | 0.436294 | 4.1:-69088482 | MS.gene067642:CDS |
GGTCTGATTTACTACCTTGA+AGG | 0.436579 | 4.1:-69088189 | None:intergenic |
AAACCAAGTCCAACTCGAAA+TGG | 0.452175 | 4.1:-69088398 | MS.gene067642:CDS |
AGCATCTAGGAGTGAAGAAA+TGG | 0.457574 | 4.1:-69088347 | MS.gene067642:CDS |
AACCTTACTTCTTCTACCCA+TGG | 0.464315 | 4.1:+69088909 | None:intergenic |
TTATGGGTCATGGCCATGTT+GGG | 0.476409 | 4.1:-69088321 | MS.gene067642:CDS |
CTTGACACAAAGGGTTCTGA+AGG | 0.478789 | 4.1:-69088638 | MS.gene067642:CDS |
CTCATAAGGTCCATACACTA+TGG | 0.479698 | 4.1:+69088771 | None:intergenic |
TCAATTATTGATGGACTCAA+TGG | 0.482426 | 4.1:-69088266 | MS.gene067642:CDS |
TCTGGTAAAGGCCAAATCTC+AGG | 0.493519 | 4.1:+69088742 | None:intergenic |
AACCATGGGTAGAAGAAGTA+AGG | 0.501192 | 4.1:-69088911 | None:intergenic |
CCAGAATTGACCTCACCAAA+TGG | 0.504570 | 4.1:+69088217 | None:intergenic |
TTAGTAGACGTTTGCAAGCA+TGG | 0.508712 | 4.1:-69088456 | MS.gene067642:CDS |
TGGATATGAGTTATCTTGCT+TGG | 0.509186 | 4.1:-69088504 | MS.gene067642:CDS |
AGAGACTTTCTTGACACAAA+GGG | 0.517022 | 4.1:-69088647 | MS.gene067642:CDS |
TGCAACATCATTGACAATGA+AGG | 0.517037 | 4.1:+69088879 | None:intergenic |
ATGAGTCAATGTCTTAATGA+AGG | 0.517500 | 4.1:-69088556 | MS.gene067642:CDS |
CAATGATCAAAATCAAATCA+TGG | 0.521352 | 4.1:-69088428 | MS.gene067642:CDS |
CACCACTTCTAGCAGCATCT+AGG | 0.525777 | 4.1:-69088360 | MS.gene067642:CDS |
TTTGTGTCAAGAAAGTCTCT+TGG | 0.525855 | 4.1:+69088650 | None:intergenic |
TAGTAGACGTTTGCAAGCAT+GGG | 0.527105 | 4.1:-69088455 | MS.gene067642:CDS |
GAAGCCTGTGCCATAGTGTA+TGG | 0.533456 | 4.1:-69088781 | MS.gene067642:CDS |
GATTTGGCCTTTACCAGAGG+GGG | 0.545213 | 4.1:-69088737 | MS.gene067642:CDS |
GAAATGGCAATTATGGGTCA+TGG | 0.549964 | 4.1:-69088331 | MS.gene067642:CDS |
ACAGGCTTCAATGCCACATA+GGG | 0.562298 | 4.1:+69088795 | None:intergenic |
GAGATTTGGCCTTTACCAGA+GGG | 0.564008 | 4.1:-69088739 | MS.gene067642:CDS |
ATTATGGGTCATGGCCATGT+TGG | 0.565284 | 4.1:-69088322 | MS.gene067642:CDS |
GTGCACGAGACAGTGCCATT+TGG | 0.566982 | 4.1:-69088232 | MS.gene067642:CDS |
CTCCTAGATGCTGCTAGAAG+TGG | 0.571630 | 4.1:+69088358 | None:intergenic |
TACTAACGTCCTTCAAATTG+TGG | 0.573371 | 4.1:+69088473 | None:intergenic |
CACAGGCTTCAATGCCACAT+AGG | 0.577126 | 4.1:+69088794 | None:intergenic |
TTGTTGTCGCCATTTCGAGT+TGG | 0.584691 | 4.1:+69088389 | None:intergenic |
CATTAATAGGTATCCCAACA+TGG | 0.589301 | 4.1:+69088308 | None:intergenic |
TCATTGTCAATGATGTTGCA+AGG | 0.595963 | 4.1:-69088876 | MS.gene067642:CDS |
AAAGGCCAAATCTCAGGTTG+AGG | 0.605277 | 4.1:+69088748 | None:intergenic |
CTAGATGCTGCTAGAAGTGG+TGG | 0.605478 | 4.1:+69088361 | None:intergenic |
TTGATGGACTCAATGGTGGC+TGG | 0.607204 | 4.1:-69088259 | MS.gene067642:CDS |
AAGAGACTTTCTTGACACAA+AGG | 0.607804 | 4.1:-69088648 | MS.gene067642:CDS |
ATCATACAAGAAAAGAACGA+AGG | 0.618898 | 4.1:-69088848 | MS.gene067642:CDS |
TCATACAAGAAAAGAACGAA+GGG | 0.620354 | 4.1:-69088847 | MS.gene067642:CDS |
CGAGACAGTGCCATTTGGTG+AGG | 0.623614 | 4.1:-69088227 | MS.gene067642:CDS |
TGAGATTTGGCCTTTACCAG+AGG | 0.627166 | 4.1:-69088740 | MS.gene067642:CDS |
GATGCTGCTAGAAGTGGTGG+TGG | 0.633563 | 4.1:+69088364 | None:intergenic |
AGGTCCATACACTATGGCAC+AGG | 0.635258 | 4.1:+69088777 | None:intergenic |
AGATTTGGCCTTTACCAGAG+GGG | 0.656413 | 4.1:-69088738 | MS.gene067642:CDS |
GCTGAACTTAGCACCCTATG+TGG | 0.657570 | 4.1:-69088808 | MS.gene067642:CDS |
ATTATTGATGGACTCAATGG+TGG | 0.666274 | 4.1:-69088263 | MS.gene067642:CDS |
GCATGACAATATGTCAACAA+TGG | 0.671130 | 4.1:-69088524 | MS.gene067642:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAAACAAAGAAAAGAAAAT+AGG | - | chr4.1:69088499-69088518 | MS.gene067642:CDS | 20.0% |
!! | ATAATGTCATCATCATTAAT+AGG | + | chr4.1:69088807-69088826 | None:intergenic | 20.0% |
!! | GAAACAAAGAAAAGAAAATA+GGG | - | chr4.1:69088500-69088519 | MS.gene067642:CDS | 20.0% |
! | CAATGATCAAAATCAAATCA+TGG | - | chr4.1:69088671-69088690 | MS.gene067642:CDS | 25.0% |
! | TATGCAAAGTCAATTATTGA+TGG | - | chr4.1:69088824-69088843 | MS.gene067642:CDS | 25.0% |
AGTGAAGAAATGGCAATTAT+GGG | - | chr4.1:69088762-69088781 | MS.gene067642:CDS | 30.0% | |
ATCATACAAGAAAAGAACGA+AGG | - | chr4.1:69088251-69088270 | MS.gene067642:CDS | 30.0% | |
ATGAGTCAATGTCTTAATGA+AGG | - | chr4.1:69088543-69088562 | MS.gene067642:CDS | 30.0% | |
TCATACAAGAAAAGAACGAA+GGG | - | chr4.1:69088252-69088271 | MS.gene067642:CDS | 30.0% | |
!! | TCAATTATTGATGGACTCAA+TGG | - | chr4.1:69088833-69088852 | MS.gene067642:CDS | 30.0% |
AACGAAGGGTCTATTGAAAA+AGG | - | chr4.1:69088266-69088285 | MS.gene067642:CDS | 35.0% | |
AAGAGACTTTCTTGACACAA+AGG | - | chr4.1:69088451-69088470 | MS.gene067642:CDS | 35.0% | |
AGAGACTTTCTTGACACAAA+GGG | - | chr4.1:69088452-69088471 | MS.gene067642:CDS | 35.0% | |
CATTAATAGGTATCCCAACA+TGG | + | chr4.1:69088794-69088813 | None:intergenic | 35.0% | |
GAGTGAAGAAATGGCAATTA+TGG | - | chr4.1:69088761-69088780 | MS.gene067642:CDS | 35.0% | |
GCATGACAATATGTCAACAA+TGG | - | chr4.1:69088575-69088594 | MS.gene067642:CDS | 35.0% | |
GTTGATTGACCACAATTTGA+AGG | - | chr4.1:69088617-69088636 | MS.gene067642:CDS | 35.0% | |
TACTAACGTCCTTCAAATTG+TGG | + | chr4.1:69088629-69088648 | None:intergenic | 35.0% | |
TCATTGTCAATGATGTTGCA+AGG | - | chr4.1:69088223-69088242 | MS.gene067642:CDS | 35.0% | |
TGCAACATCATTGACAATGA+AGG | + | chr4.1:69088223-69088242 | None:intergenic | 35.0% | |
TGGATATGAGTTATCTTGCT+TGG | - | chr4.1:69088595-69088614 | MS.gene067642:CDS | 35.0% | |
TTTGTGTCAAGAAAGTCTCT+TGG | + | chr4.1:69088452-69088471 | None:intergenic | 35.0% | |
!! | ATTATTGATGGACTCAATGG+TGG | - | chr4.1:69088836-69088855 | MS.gene067642:CDS | 35.0% |
!! | TGAATTTTGAGAGCACAGAT+TGG | + | chr4.1:69088389-69088408 | None:intergenic | 35.0% |
AAACCAAGTCCAACTCGAAA+TGG | - | chr4.1:69088701-69088720 | MS.gene067642:CDS | 40.0% | |
AGCATCTAGGAGTGAAGAAA+TGG | - | chr4.1:69088752-69088771 | MS.gene067642:CDS | 40.0% | |
CTCATAAGGTCCATACACTA+TGG | + | chr4.1:69088331-69088350 | None:intergenic | 40.0% | |
GAAATGGCAATTATGGGTCA+TGG | - | chr4.1:69088768-69088787 | MS.gene067642:CDS | 40.0% | |
TAGTAGACGTTTGCAAGCAT+GGG | - | chr4.1:69088644-69088663 | MS.gene067642:CDS | 40.0% | |
TTAGTAGACGTTTGCAAGCA+TGG | - | chr4.1:69088643-69088662 | MS.gene067642:CDS | 40.0% | |
ACAGGCTTCAATGCCACATA+GGG | + | chr4.1:69088307-69088326 | None:intergenic | 45.0% | |
ATGAGCCTCAACCTGAGATT+TGG | - | chr4.1:69088346-69088365 | MS.gene067642:CDS | 45.0% | |
ATTATGGGTCATGGCCATGT+TGG | - | chr4.1:69088777-69088796 | MS.gene067642:CDS | 45.0% | |
CCAGAATTGACCTCACCAAA+TGG | + | chr4.1:69088885-69088904 | None:intergenic | 45.0% | |
TCTGGTAAAGGCCAAATCTC+AGG | + | chr4.1:69088360-69088379 | None:intergenic | 45.0% | |
TTATGGGTCATGGCCATGTT+GGG | - | chr4.1:69088778-69088797 | MS.gene067642:CDS | 45.0% | |
! | AAAGGCCAAATCTCAGGTTG+AGG | + | chr4.1:69088354-69088373 | None:intergenic | 45.0% |
! | AGATTTGGCCTTTACCAGAG+GGG | - | chr4.1:69088361-69088380 | MS.gene067642:CDS | 45.0% |
! | CCATTTGGTGAGGTCAATTC+TGG | - | chr4.1:69088882-69088901 | MS.gene067642:CDS | 45.0% |
! | CTTGACACAAAGGGTTCTGA+AGG | - | chr4.1:69088461-69088480 | MS.gene067642:CDS | 45.0% |
! | GAGATTTGGCCTTTACCAGA+GGG | - | chr4.1:69088360-69088379 | MS.gene067642:CDS | 45.0% |
! | TGAGATTTGGCCTTTACCAG+AGG | - | chr4.1:69088359-69088378 | MS.gene067642:CDS | 45.0% |
! | TTGTTGTCGCCATTTCGAGT+TGG | + | chr4.1:69088713-69088732 | None:intergenic | 45.0% |
!! | ATCTCAGGTTGAGGCTCATA+AGG | + | chr4.1:69088345-69088364 | None:intergenic | 45.0% |
!! | GTGAGGTCAATTCTGGAGTT+TGG | - | chr4.1:69088889-69088908 | MS.gene067642:CDS | 45.0% |
AGGTCCATACACTATGGCAC+AGG | + | chr4.1:69088325-69088344 | None:intergenic | 50.0% | |
CACAGGCTTCAATGCCACAT+AGG | + | chr4.1:69088308-69088327 | None:intergenic | 50.0% | |
CACCACTTCTAGCAGCATCT+AGG | - | chr4.1:69088739-69088758 | MS.gene067642:CDS | 50.0% | |
CTAGATGCTGCTAGAAGTGG+TGG | + | chr4.1:69088741-69088760 | None:intergenic | 50.0% | |
CTCCTAGATGCTGCTAGAAG+TGG | + | chr4.1:69088744-69088763 | None:intergenic | 50.0% | |
GAAGCCTGTGCCATAGTGTA+TGG | - | chr4.1:69088318-69088337 | MS.gene067642:CDS | 50.0% | |
GCTGAACTTAGCACCCTATG+TGG | - | chr4.1:69088291-69088310 | MS.gene067642:CDS | 50.0% | |
! | GATTTGGCCTTTACCAGAGG+GGG | - | chr4.1:69088362-69088381 | MS.gene067642:CDS | 50.0% |
!! | TCGCCATTTCGAGTTGGACT+TGG | + | chr4.1:69088707-69088726 | None:intergenic | 50.0% |
!! | TTGATGGACTCAATGGTGGC+TGG | - | chr4.1:69088840-69088859 | MS.gene067642:CDS | 50.0% |
GATGCTGCTAGAAGTGGTGG+TGG | + | chr4.1:69088738-69088757 | None:intergenic | 55.0% | |
GATTGGACCCCCTCTGGTAA+AGG | + | chr4.1:69088372-69088391 | None:intergenic | 55.0% | |
! | GTGCACGAGACAGTGCCATT+TGG | - | chr4.1:69088867-69088886 | MS.gene067642:CDS | 55.0% |
!! | CGAGACAGTGCCATTTGGTG+AGG | - | chr4.1:69088872-69088891 | MS.gene067642:CDS | 55.0% |
AGCACAGATTGGACCCCCTC+TGG | + | chr4.1:69088378-69088397 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 69088192 | 69088929 | 69088192 | ID=MS.gene067642 |
chr4.1 | mRNA | 69088192 | 69088929 | 69088192 | ID=MS.gene067642.t1;Parent=MS.gene067642 |
chr4.1 | exon | 69088192 | 69088929 | 69088192 | ID=MS.gene067642.t1.exon1;Parent=MS.gene067642.t1 |
chr4.1 | CDS | 69088192 | 69088929 | 69088192 | ID=cds.MS.gene067642.t1;Parent=MS.gene067642.t1 |
Gene Sequence |
Protein sequence |