Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067692.t1 | XP_003605525.1 | 82.3 | 231 | 41 | 0 | 1 | 231 | 1 | 231 | 1.50E-101 | 379 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067692.t1 | Q9FJK3 | 52.8 | 161 | 75 | 1 | 1 | 161 | 1 | 160 | 2.6e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067692.t1 | G7JN85 | 82.3 | 231 | 41 | 0 | 1 | 231 | 1 | 231 | 1.1e-101 | 379.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067692.t1 | TF | MADS-M-type |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067692.t1 | MTR_4g032620 | 90.476 | 231 | 22 | 0 | 1 | 231 | 1 | 231 | 1.05e-159 | 441 |
| MS.gene067692.t1 | MTR_8g036130 | 59.514 | 247 | 84 | 3 | 1 | 231 | 1 | 247 | 1.59e-94 | 277 |
| MS.gene067692.t1 | MTR_4g031910 | 53.361 | 238 | 95 | 2 | 1 | 231 | 1 | 229 | 6.19e-78 | 234 |
| MS.gene067692.t1 | MTR_4g032290 | 54.918 | 244 | 84 | 4 | 1 | 231 | 1 | 231 | 4.35e-74 | 224 |
| MS.gene067692.t1 | MTR_3g065100 | 48.117 | 239 | 112 | 3 | 1 | 228 | 1 | 238 | 6.68e-64 | 199 |
| MS.gene067692.t1 | MTR_4g032260 | 61.935 | 155 | 59 | 0 | 1 | 155 | 1 | 155 | 1.85e-56 | 177 |
| MS.gene067692.t1 | MTR_3g466980 | 42.672 | 232 | 117 | 5 | 1 | 227 | 1 | 221 | 2.64e-55 | 176 |
| MS.gene067692.t1 | MTR_2g035610 | 67.769 | 121 | 39 | 0 | 1 | 121 | 1 | 121 | 1.08e-49 | 159 |
| MS.gene067692.t1 | MTR_3g466830 | 43.827 | 162 | 88 | 2 | 3 | 163 | 2 | 161 | 5.26e-45 | 148 |
| MS.gene067692.t1 | MTR_3g466890 | 42.767 | 159 | 88 | 2 | 3 | 160 | 2 | 158 | 1.57e-39 | 134 |
| MS.gene067692.t1 | MTR_5g047580 | 40.000 | 155 | 91 | 2 | 1 | 155 | 1 | 153 | 1.38e-38 | 131 |
| MS.gene067692.t1 | MTR_5g075380 | 41.558 | 154 | 89 | 1 | 1 | 154 | 1 | 153 | 8.61e-38 | 129 |
| MS.gene067692.t1 | MTR_3g031100 | 41.935 | 155 | 90 | 0 | 1 | 155 | 1 | 155 | 2.23e-37 | 131 |
| MS.gene067692.t1 | MTR_4g063790 | 37.427 | 171 | 107 | 0 | 1 | 171 | 1 | 171 | 3.99e-37 | 128 |
| MS.gene067692.t1 | MTR_3g467080 | 37.419 | 155 | 97 | 0 | 1 | 155 | 1 | 155 | 6.62e-36 | 125 |
| MS.gene067692.t1 | MTR_2g016210 | 33.480 | 227 | 129 | 4 | 1 | 219 | 1 | 213 | 3.11e-35 | 125 |
| MS.gene067692.t1 | MTR_1g090783 | 41.497 | 147 | 84 | 2 | 3 | 149 | 2 | 146 | 3.82e-35 | 122 |
| MS.gene067692.t1 | MTR_7g011950 | 41.558 | 154 | 88 | 2 | 1 | 154 | 1 | 152 | 5.22e-35 | 122 |
| MS.gene067692.t1 | MTR_1g090697 | 36.709 | 158 | 98 | 2 | 1 | 158 | 1 | 156 | 6.37e-33 | 117 |
| MS.gene067692.t1 | MTR_4g028720 | 40.260 | 154 | 90 | 2 | 1 | 154 | 1 | 152 | 1.79e-32 | 115 |
| MS.gene067692.t1 | MTR_1g077390 | 37.013 | 154 | 95 | 2 | 1 | 154 | 1 | 152 | 5.11e-32 | 114 |
| MS.gene067692.t1 | MTR_4g028800 | 77.143 | 70 | 14 | 1 | 1 | 70 | 1 | 68 | 8.54e-32 | 111 |
| MS.gene067692.t1 | MTR_3g031240 | 35.976 | 164 | 101 | 2 | 1 | 162 | 1 | 162 | 1.00e-31 | 114 |
| MS.gene067692.t1 | MTR_1g090710 | 34.810 | 158 | 102 | 1 | 1 | 158 | 1 | 157 | 1.72e-31 | 113 |
| MS.gene067692.t1 | MTR_1g084950 | 38.710 | 155 | 93 | 2 | 1 | 155 | 1 | 153 | 3.29e-31 | 112 |
| MS.gene067692.t1 | MTR_1g077320 | 37.013 | 154 | 95 | 2 | 1 | 154 | 1 | 152 | 7.62e-29 | 106 |
| MS.gene067692.t1 | MTR_2g035580 | 39.355 | 155 | 93 | 1 | 1 | 155 | 1 | 154 | 1.73e-28 | 105 |
| MS.gene067692.t1 | MTR_3g466900 | 38.462 | 130 | 77 | 2 | 32 | 160 | 2 | 129 | 2.85e-28 | 104 |
| MS.gene067692.t1 | MTR_1g077300 | 40.127 | 157 | 84 | 3 | 1 | 154 | 1 | 150 | 3.56e-28 | 104 |
| MS.gene067692.t1 | MTR_3g466930 | 40.458 | 131 | 73 | 4 | 32 | 160 | 2 | 129 | 4.48e-28 | 103 |
| MS.gene067692.t1 | MTR_7g055800 | 47.899 | 119 | 34 | 2 | 1 | 119 | 1 | 91 | 1.49e-26 | 98.6 |
| MS.gene067692.t1 | MTR_3g465410 | 36.496 | 137 | 87 | 0 | 29 | 165 | 1 | 137 | 1.74e-25 | 97.4 |
| MS.gene067692.t1 | MTR_5g047560 | 38.983 | 118 | 55 | 2 | 1 | 118 | 1 | 101 | 4.00e-23 | 91.3 |
| MS.gene067692.t1 | MTR_4g032270 | 45.133 | 113 | 53 | 3 | 125 | 231 | 22 | 131 | 7.07e-23 | 90.5 |
| MS.gene067692.t1 | MTR_7g055790 | 48.649 | 111 | 39 | 1 | 1 | 111 | 59 | 151 | 3.48e-22 | 89.4 |
| MS.gene067692.t1 | MTR_7g055940 | 46.667 | 105 | 28 | 2 | 1 | 105 | 1 | 77 | 3.93e-21 | 84.3 |
| MS.gene067692.t1 | MTR_4g019670 | 31.847 | 157 | 105 | 1 | 3 | 157 | 6 | 162 | 1.01e-20 | 90.5 |
| MS.gene067692.t1 | MTR_7g106510 | 31.210 | 157 | 106 | 1 | 3 | 157 | 6 | 162 | 1.01e-20 | 90.5 |
| MS.gene067692.t1 | MTR_3g093900 | 37.398 | 123 | 75 | 2 | 3 | 124 | 6 | 127 | 1.42e-18 | 84.3 |
| MS.gene067692.t1 | MTR_2g035590 | 50.562 | 89 | 44 | 0 | 74 | 162 | 1 | 89 | 1.18e-17 | 75.9 |
| MS.gene067692.t1 | MTR_6g018920 | 30.000 | 160 | 97 | 6 | 1 | 154 | 1 | 151 | 1.81e-13 | 68.9 |
| MS.gene067692.t1 | MTR_1g114730 | 35.043 | 117 | 61 | 4 | 1 | 103 | 1 | 116 | 2.57e-13 | 68.6 |
| MS.gene067692.t1 | MTR_6g005450 | 35.593 | 118 | 61 | 4 | 1 | 104 | 1 | 117 | 2.61e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067692.t1 | AT5G48670 | 52.795 | 161 | 75 | 1 | 1 | 161 | 1 | 160 | 4.91e-50 | 166 |
| MS.gene067692.t1 | AT1G65300 | 41.420 | 169 | 98 | 1 | 3 | 171 | 2 | 169 | 6.37e-40 | 139 |
| MS.gene067692.t1 | AT5G26650 | 40.462 | 173 | 100 | 2 | 4 | 176 | 2 | 171 | 6.18e-38 | 135 |
| MS.gene067692.t1 | AT5G26630 | 38.756 | 209 | 122 | 3 | 1 | 208 | 1 | 204 | 1.46e-37 | 130 |
| MS.gene067692.t1 | AT5G27960 | 39.306 | 173 | 102 | 2 | 4 | 176 | 2 | 171 | 4.30e-37 | 132 |
| MS.gene067692.t1 | AT3G05860 | 40.667 | 150 | 88 | 1 | 1 | 150 | 1 | 149 | 1.33e-36 | 128 |
| MS.gene067692.t1 | AT1G65330 | 41.875 | 160 | 92 | 1 | 3 | 162 | 2 | 160 | 2.13e-36 | 129 |
| MS.gene067692.t1 | AT3G05860 | 40.667 | 150 | 88 | 1 | 1 | 150 | 1 | 149 | 3.88e-36 | 128 |
| MS.gene067692.t1 | AT3G05860 | 40.667 | 150 | 88 | 1 | 1 | 150 | 1 | 149 | 4.97e-36 | 128 |
| MS.gene067692.t1 | AT5G27810 | 54.839 | 93 | 42 | 0 | 29 | 121 | 1 | 93 | 9.70e-33 | 115 |
| MS.gene067692.t1 | AT1G31630 | 35.220 | 159 | 101 | 2 | 3 | 161 | 2 | 158 | 8.97e-32 | 119 |
| MS.gene067692.t1 | AT1G31640 | 33.775 | 151 | 98 | 2 | 3 | 153 | 2 | 150 | 4.12e-29 | 114 |
| MS.gene067692.t1 | AT5G26580 | 36.774 | 155 | 83 | 2 | 1 | 155 | 1 | 140 | 4.76e-28 | 109 |
| MS.gene067692.t1 | AT2G28700 | 35.152 | 165 | 106 | 1 | 1 | 165 | 1 | 164 | 9.25e-27 | 105 |
| MS.gene067692.t1 | AT1G22590 | 38.614 | 101 | 62 | 0 | 1 | 101 | 1 | 101 | 5.47e-21 | 86.3 |
| MS.gene067692.t1 | AT2G40210 | 41.176 | 119 | 70 | 0 | 1 | 119 | 1 | 119 | 5.66e-19 | 84.7 |
| MS.gene067692.t1 | AT5G06500 | 30.519 | 154 | 105 | 1 | 1 | 154 | 1 | 152 | 2.52e-18 | 81.3 |
| MS.gene067692.t1 | AT5G58890 | 39.394 | 99 | 52 | 3 | 1 | 92 | 1 | 98 | 1.46e-12 | 65.9 |
| MS.gene067692.t1 | AT5G55690 | 38.298 | 94 | 51 | 2 | 1 | 87 | 1 | 94 | 3.60e-12 | 64.7 |
| MS.gene067692.t1 | AT5G55690 | 38.298 | 94 | 51 | 2 | 1 | 87 | 1 | 94 | 3.60e-12 | 64.7 |
Find 56 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCCATTTCCTCATTCC+TGG | 0.183624 | 4.1:-68394921 | None:intergenic |
| AATGATGTCACCATTATTCA+TGG | 0.300939 | 4.1:-68394969 | None:intergenic |
| TTGTATCTTCAGTTTCTCTT+TGG | 0.302597 | 4.1:-68394687 | None:intergenic |
| ATTCATTCAAGGCAGTATAT+TGG | 0.306143 | 4.1:-68395077 | None:intergenic |
| TTCATTCAAGGCAGTATATT+GGG | 0.306995 | 4.1:-68395076 | None:intergenic |
| ATCTCTGGTTGAGGCTTGTA+TGG | 0.342107 | 4.1:-68394545 | None:intergenic |
| GAAGCATGTGCCATAGTCTA+TGG | 0.364353 | 4.1:+68394521 | MS.gene067692:CDS |
| GGAAAGCAACATACAATAAC+AGG | 0.369187 | 4.1:+68394447 | MS.gene067692:CDS |
| TATGCAGAGTAATATGTCAT+TGG | 0.410310 | 4.1:+68394775 | MS.gene067692:CDS |
| TGGTAGAAGGTTGGAAGAAG+AGG | 0.420916 | 4.1:+68394847 | MS.gene067692:CDS |
| ACAAGCCTCAACCAGAGATA+TGG | 0.424604 | 4.1:+68394549 | MS.gene067692:CDS |
| TCATTGTAAATGATGCATCT+AGG | 0.432410 | 4.1:+68394426 | MS.gene067692:CDS |
| AGGATGGGTCATGGCCATGC+TGG | 0.433216 | 4.1:+68394941 | MS.gene067692:CDS |
| ATGTTTCAATGTCTTTATGA+AGG | 0.443108 | 4.1:+68394746 | MS.gene067692:CDS |
| AAGAGACATATATGAAAGAA+AGG | 0.443744 | 4.1:+68394654 | MS.gene067692:CDS |
| GAAGATGAGACGGTGCCATT+TGG | 0.449628 | 4.1:+68395031 | MS.gene067692:CDS |
| AAATGAAGGAGGTTGGTAGA+AGG | 0.451827 | 4.1:+68394834 | MS.gene067692:CDS |
| GTCATCCAGGAATGAGGAAA+TGG | 0.454775 | 4.1:+68394916 | MS.gene067692:CDS |
| GAAGGAGGTTGGTAGAAGGT+TGG | 0.465981 | 4.1:+68394838 | MS.gene067692:CDS |
| TTGATTCAAAACATCTTTGT+TGG | 0.470119 | 4.1:+68394798 | MS.gene067692:CDS |
| ATGACAATGGTAGTGCCATT+TGG | 0.472182 | 4.1:-68394898 | None:intergenic |
| TTGGAAGAAGAGGATAATAA+TGG | 0.472270 | 4.1:+68394857 | MS.gene067692:CDS |
| ACATGAAATTCAACTCCAAA+TGG | 0.474248 | 4.1:+68394883 | MS.gene067692:CDS |
| TGTGATGACGGCCATATCTC+TGG | 0.481006 | 4.1:-68394560 | None:intergenic |
| TTGATGGGCTTGATGATGAA+TGG | 0.481425 | 4.1:+68395004 | MS.gene067692:CDS |
| GAATGAGGAAATGGCAAGGA+TGG | 0.482915 | 4.1:+68394925 | MS.gene067692:CDS |
| CTAGGATCGACCTCGCCAAA+TGG | 0.502040 | 4.1:-68395046 | None:intergenic |
| TGGCACTACCATTGTCATCC+AGG | 0.504866 | 4.1:+68394903 | MS.gene067692:CDS |
| GTTGATTGACCAGAAAATGA+AGG | 0.505207 | 4.1:+68394820 | MS.gene067692:CDS |
| ATTCATAACAATGACTGAAA+GGG | 0.512113 | 4.1:+68394607 | MS.gene067692:CDS |
| ATTTGGACTCCTTGTGATGA+CGG | 0.513475 | 4.1:-68394572 | None:intergenic |
| CTTGTATGGTCCATAGACTA+TGG | 0.514753 | 4.1:-68394531 | None:intergenic |
| GCTGGGATGACCATGAATAA+TGG | 0.515101 | 4.1:+68394959 | MS.gene067692:CDS |
| AATTCATAACAATGACTGAA+AGG | 0.522955 | 4.1:+68394606 | MS.gene067692:CDS |
| GGATGGGTCATGGCCATGCT+GGG | 0.533577 | 4.1:+68394942 | MS.gene067692:CDS |
| AGAGACATATATGAAAGAAA+GGG | 0.542993 | 4.1:+68394655 | MS.gene067692:CDS |
| ACCATTGTCATCCAGGAATG+AGG | 0.554944 | 4.1:+68394910 | MS.gene067692:CDS |
| GACGGCCATATCTCTGGTTG+AGG | 0.560463 | 4.1:-68394554 | None:intergenic |
| GACCAGAAAATGAAGGAGGT+TGG | 0.561443 | 4.1:+68394827 | MS.gene067692:CDS |
| AACATACAATAACAGGTGGA+AGG | 0.581713 | 4.1:+68394454 | MS.gene067692:CDS |
| GTGGAAGGGTCTACTGAAGA+AGG | 0.590784 | 4.1:+68394469 | MS.gene067692:CDS |
| AAGAGAAACTGAAGATACAA+AGG | 0.595097 | 4.1:+68394690 | MS.gene067692:CDS |
| GAGATATGGCCGTCATCACA+AGG | 0.597681 | 4.1:+68394563 | MS.gene067692:CDS |
| AATGAGGAAATGGCAAGGAT+GGG | 0.613705 | 4.1:+68394926 | MS.gene067692:CDS |
| GATACAAAGGCATGACAACA+AGG | 0.619432 | 4.1:+68394703 | MS.gene067692:CDS |
| TCCTCATTCCTGGATGACAA+TGG | 0.622319 | 4.1:-68394911 | None:intergenic |
| ACATACAATAACAGGTGGAA+GGG | 0.624477 | 4.1:+68394455 | MS.gene067692:CDS |
| GAAATGGCAAGGATGGGTCA+TGG | 0.626584 | 4.1:+68394932 | MS.gene067692:CDS |
| TGACAACAAGGAGAAAGAGA+TGG | 0.637254 | 4.1:+68394715 | MS.gene067692:CDS |
| AAGCAACATACAATAACAGG+TGG | 0.643203 | 4.1:+68394450 | MS.gene067692:CDS |
| GATTGACCAGAAAATGAAGG+AGG | 0.644653 | 4.1:+68394823 | MS.gene067692:CDS |
| TATTCATGGTCATCCCAGCA+TGG | 0.650127 | 4.1:-68394955 | None:intergenic |
| CCAGGAATGAGGAAATGGCA+AGG | 0.651946 | 4.1:+68394921 | MS.gene067692:CDS |
| TGAGACGGTGCCATTTGGCG+AGG | 0.664323 | 4.1:+68395036 | MS.gene067692:CDS |
| TATGAACTAAGCACTCTGTG+TGG | 0.701795 | 4.1:+68394494 | MS.gene067692:CDS |
| GAATGGTTATGAAGATGAGA+CGG | 0.707575 | 4.1:+68395021 | MS.gene067692:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGAAAATCAATTTTTGAT+GGG | + | chr4.1:68394989-68395008 | MS.gene067692:CDS | 15.0% |
| !!! | CATTGAAAATCAATTTTTGA+TGG | + | chr4.1:68394988-68395007 | MS.gene067692:CDS | 20.0% |
| ! | AAGAGACATATATGAAAGAA+AGG | + | chr4.1:68394654-68394673 | MS.gene067692:CDS | 25.0% |
| ! | AATTCATAACAATGACTGAA+AGG | + | chr4.1:68394606-68394625 | MS.gene067692:CDS | 25.0% |
| ! | AGAGACATATATGAAAGAAA+GGG | + | chr4.1:68394655-68394674 | MS.gene067692:CDS | 25.0% |
| ! | ATGTTTCAATGTCTTTATGA+AGG | + | chr4.1:68394746-68394765 | MS.gene067692:CDS | 25.0% |
| ! | ATTCATAACAATGACTGAAA+GGG | + | chr4.1:68394607-68394626 | MS.gene067692:CDS | 25.0% |
| ! | TTGATTCAAAACATCTTTGT+TGG | + | chr4.1:68394798-68394817 | MS.gene067692:CDS | 25.0% |
| !!! | TATGAAAGAAAGGGTTTTAA+AGG | + | chr4.1:68394664-68394683 | MS.gene067692:CDS | 25.0% |
| AAGAGAAACTGAAGATACAA+AGG | + | chr4.1:68394690-68394709 | MS.gene067692:CDS | 30.0% | |
| AATGATGTCACCATTATTCA+TGG | - | chr4.1:68394972-68394991 | None:intergenic | 30.0% | |
| ACATGAAATTCAACTCCAAA+TGG | + | chr4.1:68394883-68394902 | MS.gene067692:CDS | 30.0% | |
| AGTATATTGGGCAAAAATCT+AGG | - | chr4.1:68395067-68395086 | None:intergenic | 30.0% | |
| TATGCAGAGTAATATGTCAT+TGG | + | chr4.1:68394775-68394794 | MS.gene067692:CDS | 30.0% | |
| TCATTGTAAATGATGCATCT+AGG | + | chr4.1:68394426-68394445 | MS.gene067692:CDS | 30.0% | |
| TTGGAAGAAGAGGATAATAA+TGG | + | chr4.1:68394857-68394876 | MS.gene067692:CDS | 30.0% | |
| TTGTATCTTCAGTTTCTCTT+TGG | - | chr4.1:68394690-68394709 | None:intergenic | 30.0% | |
| !!! | TGAATTTTGAGAGCACTATT+TGG | - | chr4.1:68394592-68394611 | None:intergenic | 30.0% |
| AACATACAATAACAGGTGGA+AGG | + | chr4.1:68394454-68394473 | MS.gene067692:CDS | 35.0% | |
| AAGCAACATACAATAACAGG+TGG | + | chr4.1:68394450-68394469 | MS.gene067692:CDS | 35.0% | |
| ACATACAATAACAGGTGGAA+GGG | + | chr4.1:68394455-68394474 | MS.gene067692:CDS | 35.0% | |
| GAATGGTTATGAAGATGAGA+CGG | + | chr4.1:68395021-68395040 | MS.gene067692:CDS | 35.0% | |
| GGAAAGCAACATACAATAAC+AGG | + | chr4.1:68394447-68394466 | MS.gene067692:CDS | 35.0% | |
| GTTGATTGACCAGAAAATGA+AGG | + | chr4.1:68394820-68394839 | MS.gene067692:CDS | 35.0% | |
| AATGAGGAAATGGCAAGGAT+GGG | + | chr4.1:68394926-68394945 | MS.gene067692:CDS | 40.0% | |
| ATTTGGACTCCTTGTGATGA+CGG | - | chr4.1:68394575-68394594 | None:intergenic | 40.0% | |
| CTTGTATGGTCCATAGACTA+TGG | - | chr4.1:68394534-68394553 | None:intergenic | 40.0% | |
| GATTGACCAGAAAATGAAGG+AGG | + | chr4.1:68394823-68394842 | MS.gene067692:CDS | 40.0% | |
| TATGAACTAAGCACTCTGTG+TGG | + | chr4.1:68394494-68394513 | MS.gene067692:CDS | 40.0% | |
| TGACAACAAGGAGAAAGAGA+TGG | + | chr4.1:68394715-68394734 | MS.gene067692:CDS | 40.0% | |
| ! | ATGACAATGGTAGTGCCATT+TGG | - | chr4.1:68394901-68394920 | None:intergenic | 40.0% |
| ! | GATACAAAGGCATGACAACA+AGG | + | chr4.1:68394703-68394722 | MS.gene067692:CDS | 40.0% |
| ! | TACCAACCTCCTTCATTTTC+TGG | - | chr4.1:68394832-68394851 | None:intergenic | 40.0% |
| !! | AAATGAAGGAGGTTGGTAGA+AGG | + | chr4.1:68394834-68394853 | MS.gene067692:CDS | 40.0% |
| !! | TTGATGGGCTTGATGATGAA+TGG | + | chr4.1:68395004-68395023 | MS.gene067692:CDS | 40.0% |
| ACAAGCCTCAACCAGAGATA+TGG | + | chr4.1:68394549-68394568 | MS.gene067692:CDS | 45.0% | |
| ACCATTGTCATCCAGGAATG+AGG | + | chr4.1:68394910-68394929 | MS.gene067692:CDS | 45.0% | |
| ATCTCTGGTTGAGGCTTGTA+TGG | - | chr4.1:68394548-68394567 | None:intergenic | 45.0% | |
| GAAGCATGTGCCATAGTCTA+TGG | + | chr4.1:68394521-68394540 | MS.gene067692:CDS | 45.0% | |
| GAATGAGGAAATGGCAAGGA+TGG | + | chr4.1:68394925-68394944 | MS.gene067692:CDS | 45.0% | |
| GACCAGAAAATGAAGGAGGT+TGG | + | chr4.1:68394827-68394846 | MS.gene067692:CDS | 45.0% | |
| GCTGGGATGACCATGAATAA+TGG | + | chr4.1:68394959-68394978 | MS.gene067692:CDS | 45.0% | |
| GTCATCCAGGAATGAGGAAA+TGG | + | chr4.1:68394916-68394935 | MS.gene067692:CDS | 45.0% | |
| TATTCATGGTCATCCCAGCA+TGG | - | chr4.1:68394958-68394977 | None:intergenic | 45.0% | |
| TCCTCATTCCTGGATGACAA+TGG | - | chr4.1:68394914-68394933 | None:intergenic | 45.0% | |
| TGGTAGAAGGTTGGAAGAAG+AGG | + | chr4.1:68394847-68394866 | MS.gene067692:CDS | 45.0% | |
| CCAGGAATGAGGAAATGGCA+AGG | + | chr4.1:68394921-68394940 | MS.gene067692:CDS | 50.0% | |
| GAAATGGCAAGGATGGGTCA+TGG | + | chr4.1:68394932-68394951 | MS.gene067692:CDS | 50.0% | |
| GAGATATGGCCGTCATCACA+AGG | + | chr4.1:68394563-68394582 | MS.gene067692:CDS | 50.0% | |
| GTGGAAGGGTCTACTGAAGA+AGG | + | chr4.1:68394469-68394488 | MS.gene067692:CDS | 50.0% | |
| TGGCACTACCATTGTCATCC+AGG | + | chr4.1:68394903-68394922 | MS.gene067692:CDS | 50.0% | |
| ! | CCTTGCCATTTCCTCATTCC+TGG | - | chr4.1:68394924-68394943 | None:intergenic | 50.0% |
| !! | GAAGATGAGACGGTGCCATT+TGG | + | chr4.1:68395031-68395050 | MS.gene067692:CDS | 50.0% |
| !! | GAAGGAGGTTGGTAGAAGGT+TGG | + | chr4.1:68394838-68394857 | MS.gene067692:CDS | 50.0% |
| !! | TGTGATGACGGCCATATCTC+TGG | - | chr4.1:68394563-68394582 | None:intergenic | 50.0% |
| CTAGGATCGACCTCGCCAAA+TGG | - | chr4.1:68395049-68395068 | None:intergenic | 55.0% | |
| GACGGCCATATCTCTGGTTG+AGG | - | chr4.1:68394557-68394576 | None:intergenic | 55.0% | |
| AGGATGGGTCATGGCCATGC+TGG | + | chr4.1:68394941-68394960 | MS.gene067692:CDS | 60.0% | |
| GGATGGGTCATGGCCATGCT+GGG | + | chr4.1:68394942-68394961 | MS.gene067692:CDS | 60.0% | |
| !! | TGAGACGGTGCCATTTGGCG+AGG | + | chr4.1:68395036-68395055 | MS.gene067692:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 68394398 | 68395093 | 68394398 | ID=MS.gene067692 |
| chr4.1 | mRNA | 68394398 | 68395093 | 68394398 | ID=MS.gene067692.t1;Parent=MS.gene067692 |
| chr4.1 | exon | 68394398 | 68395093 | 68394398 | ID=MS.gene067692.t1.exon1;Parent=MS.gene067692.t1 |
| chr4.1 | CDS | 68394398 | 68395093 | 68394398 | ID=cds.MS.gene067692.t1;Parent=MS.gene067692.t1 |
| Gene Sequence |
| Protein sequence |
