Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067792.t1 | XP_003624615.1 | 98.9 | 265 | 1 | 1 | 1 | 265 | 1 | 263 | 2.60E-145 | 524.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067792.t1 | B3H615 | 78.9 | 265 | 49 | 4 | 1 | 263 | 1 | 260 | 1.8e-118 | 426.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067792.t1 | A2Q5P5 | 98.9 | 265 | 1 | 1 | 1 | 265 | 1 | 263 | 1.9e-145 | 524.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067792.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067792.t1 | MTR_7g085450 | 99.245 | 265 | 0 | 1 | 1 | 265 | 1 | 263 | 0.0 | 550 |
| MS.gene067792.t1 | MTR_1g046460 | 30.888 | 259 | 146 | 6 | 9 | 258 | 3 | 237 | 1.66e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067792.t1 | AT1G54390 | 79.623 | 265 | 47 | 4 | 1 | 263 | 1 | 260 | 5.97e-143 | 402 |
| MS.gene067792.t1 | AT1G54390 | 79.623 | 265 | 47 | 4 | 1 | 263 | 1 | 260 | 5.97e-143 | 402 |
| MS.gene067792.t1 | AT1G54390 | 76.211 | 227 | 47 | 4 | 39 | 263 | 19 | 240 | 1.10e-113 | 327 |
| MS.gene067792.t1 | AT1G54390 | 76.211 | 227 | 47 | 4 | 39 | 263 | 19 | 240 | 1.10e-113 | 327 |
| MS.gene067792.t1 | AT1G54390 | 76.211 | 227 | 47 | 4 | 39 | 263 | 19 | 240 | 1.10e-113 | 327 |
| MS.gene067792.t1 | AT1G54390 | 77.922 | 231 | 44 | 4 | 1 | 229 | 1 | 226 | 5.43e-113 | 328 |
| MS.gene067792.t1 | AT1G54390 | 77.922 | 231 | 44 | 4 | 1 | 229 | 1 | 226 | 5.70e-113 | 327 |
| MS.gene067792.t1 | AT1G54390 | 81.768 | 181 | 29 | 3 | 85 | 263 | 1 | 179 | 1.79e-99 | 288 |
| MS.gene067792.t1 | AT3G24010 | 36.111 | 180 | 99 | 4 | 79 | 258 | 61 | 224 | 7.90e-30 | 112 |
Find 63 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAATTTCAGGTATCTTT+TGG | 0.196809 | 7.1:-19599608 | MS.gene067792:intron |
| TGAACCTTGTCTCTTGTGTT+AGG | 0.290251 | 7.1:+19599413 | None:intergenic |
| TAGTCCTTCTTATGGCTTCC+TGG | 0.301453 | 7.1:+19599802 | None:intergenic |
| AGTCTACGTCGATGACTATT+TGG | 0.315508 | 7.1:-19601545 | MS.gene067792:CDS |
| AATCGAAGAGACTTGATTAC+AGG | 0.362393 | 7.1:-19599864 | MS.gene067792:CDS |
| ACACAGTATGTAGGTTCATT+TGG | 0.368463 | 7.1:+19599745 | None:intergenic |
| ACTTTGTCTGCTGCCTTGTC+TGG | 0.368542 | 7.1:+19601172 | None:intergenic |
| TGTAGGTTCATTTGGATCAA+TGG | 0.378225 | 7.1:+19599753 | None:intergenic |
| AAAAGAAATCGAGGCGAATC+AGG | 0.384479 | 7.1:-19601043 | MS.gene067792:CDS |
| GGATCATATAGTCCTTCTTA+TGG | 0.391014 | 7.1:+19599794 | None:intergenic |
| GTAGGTTCATTTGGATCAAT+GGG | 0.417965 | 7.1:+19599754 | None:intergenic |
| TACATACTGTGTTTGTCATC+AGG | 0.423437 | 7.1:-19599734 | MS.gene067792:intron |
| CTTTAGATCTTCAGCGAAGT+AGG | 0.427352 | 7.1:+19600378 | None:intergenic |
| TTGATTACAGGGAGAGAGAC+TGG | 0.434207 | 7.1:-19599852 | MS.gene067792:CDS |
| TTCTTATGGCTTCCTGGTGG+AGG | 0.438248 | 7.1:+19599808 | None:intergenic |
| AAGCTCAGCGGGCAATGTAT+TGG | 0.453107 | 7.1:+19601410 | None:intergenic |
| GCAGCAGACAAAGTACTGTA+TGG | 0.463935 | 7.1:-19601163 | MS.gene067792:CDS |
| CTCATCTCATGGCTCTAAGA+AGG | 0.470707 | 7.1:-19601136 | MS.gene067792:CDS |
| AGAAGTCTCTGAAGCTCAGC+GGG | 0.472014 | 7.1:+19601399 | None:intergenic |
| GTGGTAGTAATCTGCAAGTT+GGG | 0.493544 | 7.1:+19599374 | None:intergenic |
| GAAAAGCGCAGGCACGCATA+TGG | 0.503955 | 7.1:-19599895 | MS.gene067792:CDS |
| TGTATGGGGTTCTCATCTCA+TGG | 0.513570 | 7.1:-19601147 | MS.gene067792:CDS |
| AACACAAGAGACAAGGTTCA+AGG | 0.514404 | 7.1:-19599410 | MS.gene067792:CDS |
| GGCACGACAAGCATATGAAC+TGG | 0.521248 | 7.1:-19600983 | MS.gene067792:intron |
| GAAGGACTATATGATCCCTA+TGG | 0.521889 | 7.1:-19599788 | MS.gene067792:CDS |
| TGTGGTAGTAATCTGCAAGT+TGG | 0.523029 | 7.1:+19599373 | None:intergenic |
| GGGATCGTTCATCGAGTTCA+CGG | 0.530503 | 7.1:+19601367 | None:intergenic |
| CAGCAGACAAAGTACTGTAT+GGG | 0.532458 | 7.1:-19601162 | MS.gene067792:CDS |
| ATGGGTTGATCAATATCCAT+AGG | 0.533374 | 7.1:+19599772 | None:intergenic |
| GATAGTGCCGAGGAGGTGAA+TGG | 0.537405 | 7.1:-19599456 | MS.gene067792:intron |
| AAAATGGCAATTGCACGCAC+TGG | 0.541228 | 7.1:-19601568 | MS.gene067792:CDS |
| TAATCAAGTCTCTTCGATTG+AGG | 0.541620 | 7.1:+19599868 | None:intergenic |
| TTAGGCCAACACATGAATAG+TGG | 0.541653 | 7.1:+19599431 | None:intergenic |
| TCCACCAGGAAGCCATAAGA+AGG | 0.551349 | 7.1:-19599806 | MS.gene067792:CDS |
| AAGATTTATCATTGACATTG+TGG | 0.551966 | 7.1:+19599355 | None:intergenic |
| ATTGAGTTTATGCACTGAGA+AGG | 0.558927 | 7.1:-19601013 | MS.gene067792:CDS |
| TGGTTCCACTATTCATGTGT+TGG | 0.563319 | 7.1:-19599436 | MS.gene067792:CDS |
| AGACAAGGTTCAAGGGAAAG+TGG | 0.569480 | 7.1:-19599402 | MS.gene067792:CDS |
| ACACAAGAGACAAGGTTCAA+GGG | 0.570451 | 7.1:-19599409 | MS.gene067792:CDS |
| TCCCTAAACCTGAAAAGCGC+AGG | 0.571245 | 7.1:-19599906 | MS.gene067792:CDS |
| CAATTACAATTACATGAATG+AGG | 0.576780 | 7.1:-19601094 | MS.gene067792:CDS |
| TCCTTCTTATGGCTTCCTGG+TGG | 0.577394 | 7.1:+19599805 | None:intergenic |
| TTAGGGACAATAGGAAGTGG+GGG | 0.580164 | 7.1:+19599922 | None:intergenic |
| GGTTTAGGGACAATAGGAAG+TGG | 0.584655 | 7.1:+19599919 | None:intergenic |
| TGGGTTGATCAATATCCATA+GGG | 0.596146 | 7.1:+19599773 | None:intergenic |
| TTCGCTGAAGATCTAAAGCA+AGG | 0.596239 | 7.1:-19600373 | MS.gene067792:intron |
| GAGAAGTCTCTGAAGCTCAG+CGG | 0.598711 | 7.1:+19601398 | None:intergenic |
| TCATCTCATGGCTCTAAGAA+GGG | 0.599282 | 7.1:-19601135 | MS.gene067792:CDS |
| TGATGACAAACACAGTATGT+AGG | 0.600981 | 7.1:+19599736 | None:intergenic |
| GTTTAGGGACAATAGGAAGT+GGG | 0.601691 | 7.1:+19599920 | None:intergenic |
| TTTGAGCTAATGCCTCCACC+AGG | 0.610776 | 7.1:-19599820 | MS.gene067792:CDS |
| CCATGTAAAACGACTTGATG+AGG | 0.613217 | 7.1:-19600407 | MS.gene067792:CDS |
| AGTGGAACCATTCACCTCCT+CGG | 0.620021 | 7.1:+19599449 | None:intergenic |
| TGATTACAGGGAGAGAGACT+GGG | 0.622459 | 7.1:-19599851 | MS.gene067792:CDS |
| ATCGAAGAGACTTGATTACA+GGG | 0.633832 | 7.1:-19599863 | MS.gene067792:CDS |
| TGTTATTCTTGATAGTGCCG+AGG | 0.646877 | 7.1:-19599466 | MS.gene067792:intron |
| TTTAGGGACAATAGGAAGTG+GGG | 0.647357 | 7.1:+19599921 | None:intergenic |
| AAGCTATGATAAACCAGACA+AGG | 0.648028 | 7.1:-19601185 | MS.gene067792:CDS |
| TCGTTCATCGAGTTCACGGA+CGG | 0.655630 | 7.1:+19601371 | None:intergenic |
| AGCAGACAAAGTACTGTATG+GGG | 0.659495 | 7.1:-19601161 | MS.gene067792:CDS |
| GAAAATGCGAAAAGAAATCG+AGG | 0.660931 | 7.1:-19601052 | MS.gene067792:CDS |
| TATTCTTGATAGTGCCGAGG+AGG | 0.680877 | 7.1:-19599463 | MS.gene067792:intron |
| TTGGCCTAACACAAGAGACA+AGG | 0.699970 | 7.1:-19599417 | MS.gene067792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAGGTAAATAATTTA+GGG | + | chr7.1:19599622-19599641 | None:intergenic | 10.0% |
| !! | TAAAAAAAGGTAAATAATTT+AGG | + | chr7.1:19599623-19599642 | None:intergenic | 10.0% |
| !!! | TTTTATATATAGCATTTATA+AGG | - | chr7.1:19600007-19600026 | MS.gene067792:intron | 10.0% |
| !! | AACAAAAAAGAAAATAAGAA+AGG | + | chr7.1:19600932-19600951 | None:intergenic | 15.0% |
| !!! | AAATAATTTAGGGTTAAAAA+GGG | + | chr7.1:19599612-19599631 | None:intergenic | 15.0% |
| !!! | ATCATTATTTTTTGTTGTTA+TGG | - | chr7.1:19599704-19599723 | MS.gene067792:intron | 15.0% |
| !!! | TAAATAATTTAGGGTTAAAA+AGG | + | chr7.1:19599613-19599632 | None:intergenic | 15.0% |
| !! | CATCTGTTTAATAGAAAATT+TGG | + | chr7.1:19599498-19599517 | None:intergenic | 20.0% |
| !! | TAATATAATCCAAAGAGTAA+TGG | - | chr7.1:19600058-19600077 | MS.gene067792:intron | 20.0% |
| !!! | AAAGAGTATGTTCAATATTT+TGG | - | chr7.1:19600716-19600735 | MS.gene067792:intron | 20.0% |
| !!! | AATAATTTAGGGTTAAAAAG+GGG | + | chr7.1:19599611-19599630 | None:intergenic | 20.0% |
| !!! | TCACATTTTATTTTATCAGA+GGG | - | chr7.1:19600952-19600971 | MS.gene067792:intron | 20.0% |
| !!! | TGTCAATGAAATTGTTTTTT+TGG | - | chr7.1:19600889-19600908 | MS.gene067792:intron | 20.0% |
| !!! | TTCACATTTTATTTTATCAG+AGG | - | chr7.1:19600951-19600970 | MS.gene067792:intron | 20.0% |
| !!! | TTTTAGTAGGAATTTACATT+GGG | + | chr7.1:19599584-19599603 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAGGAATTTACAT+TGG | + | chr7.1:19599585-19599604 | None:intergenic | 20.0% |
| ! | AAAAAATCGGTGAAAAATTG+GGG | + | chr7.1:19599465-19599484 | None:intergenic | 25.0% |
| ! | AAAAATTGGGGGAAAAATTA+GGG | + | chr7.1:19599453-19599472 | None:intergenic | 25.0% |
| ! | AAATCAGAATGCAAATCAAA+TGG | + | chr7.1:19600589-19600608 | None:intergenic | 25.0% |
| ! | AACAATTTCATTGACAAAGT+AGG | + | chr7.1:19600885-19600904 | None:intergenic | 25.0% |
| ! | AACTCAGTCAAAATAACAAA+AGG | + | chr7.1:19601436-19601455 | None:intergenic | 25.0% |
| ! | ACTTAATCACATTACCATTA+AGG | + | chr7.1:19600088-19600107 | None:intergenic | 25.0% |
| ! | AGTACTTTAATATCAACAGA+GGG | + | chr7.1:19599646-19599665 | None:intergenic | 25.0% |
| ! | AGTCAGTTTATTGAAATTTC+AGG | - | chr7.1:19601310-19601329 | MS.gene067792:intron | 25.0% |
| ! | CAATTACAATTACATGAATG+AGG | - | chr7.1:19599834-19599853 | MS.gene067792:CDS | 25.0% |
| ! | CGTAGAGAATAGAAAATAAA+AGG | + | chr7.1:19599419-19599438 | None:intergenic | 25.0% |
| ! | GAAAAAATCGGTGAAAAATT+GGG | + | chr7.1:19599466-19599485 | None:intergenic | 25.0% |
| ! | TAGTACTTTAATATCAACAG+AGG | + | chr7.1:19599647-19599666 | None:intergenic | 25.0% |
| ! | TGAAAAAATCGGTGAAAAAT+TGG | + | chr7.1:19599467-19599486 | None:intergenic | 25.0% |
| ! | TGGCACAAAATTGAAAAAAT+CGG | + | chr7.1:19599478-19599497 | None:intergenic | 25.0% |
| !!! | AAAAAGGGGAATTTTTTAGT+AGG | + | chr7.1:19599597-19599616 | None:intergenic | 25.0% |
| !!! | AATGTTGTTTTGGAATTTAG+GGG | - | chr7.1:19600825-19600844 | MS.gene067792:intron | 25.0% |
| !!! | AATTTTTTCCATATTGCTTC+TGG | - | chr7.1:19600425-19600444 | MS.gene067792:intron | 25.0% |
| !!! | AGTTTTTGTTTTAGCTTTGA+TGG | - | chr7.1:19599970-19599989 | MS.gene067792:intron | 25.0% |
| !!! | CACATTTTATTTTATCAGAG+GGG | - | chr7.1:19600953-19600972 | MS.gene067792:intron | 25.0% |
| !!! | GAATGTTGTTTTGGAATTTA+GGG | - | chr7.1:19600824-19600843 | MS.gene067792:intron | 25.0% |
| !!! | TATTTTGGAAGTGCATAATT+TGG | - | chr7.1:19600731-19600750 | MS.gene067792:intron | 25.0% |
| !!! | TTGAAATTTCAGGTATCTTT+TGG | - | chr7.1:19601320-19601339 | MS.gene067792:intron | 25.0% |
| AAAAATCGGTGAAAAATTGG+GGG | + | chr7.1:19599464-19599483 | None:intergenic | 30.0% | |
| AGCTTAAACAAGAAGAATGA+TGG | + | chr7.1:19600263-19600282 | None:intergenic | 30.0% | |
| AGTCAAAATAACAAAAGGAG+AGG | + | chr7.1:19601431-19601450 | None:intergenic | 30.0% | |
| ATAGCATTTATAAGGCTCAA+GGG | - | chr7.1:19600015-19600034 | MS.gene067792:intron | 30.0% | |
| CATTACATGTTTCTTTAGAC+AGG | + | chr7.1:19600767-19600786 | None:intergenic | 30.0% | |
| CCAGATCATACTAATTGTAT+AGG | + | chr7.1:19600651-19600670 | None:intergenic | 30.0% | |
| CCTATACAATTAGTATGATC+TGG | - | chr7.1:19600648-19600667 | MS.gene067792:intron | 30.0% | |
| GAAAAATTGGGGGAAAAATT+AGG | + | chr7.1:19599454-19599473 | None:intergenic | 30.0% | |
| GTCAAAATAACAAAAGGAGA+GGG | + | chr7.1:19601430-19601449 | None:intergenic | 30.0% | |
| TATAGCATTTATAAGGCTCA+AGG | - | chr7.1:19600014-19600033 | MS.gene067792:intron | 30.0% | |
| TATCAACAGAGGGTAAAAAA+AGG | + | chr7.1:19599636-19599655 | None:intergenic | 30.0% | |
| TCATTGACAAAGTAGGAAAA+GGG | + | chr7.1:19600878-19600897 | None:intergenic | 30.0% | |
| TTCATTGACAAAGTAGGAAA+AGG | + | chr7.1:19600879-19600898 | None:intergenic | 30.0% | |
| ! | TTCTTTTCGCATTTTCTCAA+TGG | + | chr7.1:19599872-19599891 | None:intergenic | 30.0% |
| !!! | GGAATGTTGTTTTGGAATTT+AGG | - | chr7.1:19600823-19600842 | MS.gene067792:intron | 30.0% |
| AAGAAACAGCAAAAGCAAAC+AGG | - | chr7.1:19600802-19600821 | MS.gene067792:intron | 35.0% | |
| AAGCTATGATAAACCAGACA+AGG | - | chr7.1:19599743-19599762 | MS.gene067792:CDS | 35.0% | |
| AATCGAAGAGACTTGATTAC+AGG | - | chr7.1:19601064-19601083 | MS.gene067792:CDS | 35.0% | |
| ACACAGTATGTAGGTTCATT+TGG | + | chr7.1:19601186-19601205 | None:intergenic | 35.0% | |
| ATATGACACAATTGTCCACA+AGG | + | chr7.1:19601266-19601285 | None:intergenic | 35.0% | |
| ATCGAAGAGACTTGATTACA+GGG | - | chr7.1:19601065-19601084 | MS.gene067792:CDS | 35.0% | |
| ATGATTGCAGATCCTATCTT+GGG | - | chr7.1:19600393-19600412 | MS.gene067792:CDS | 35.0% | |
| ATGCATAACCAGAAGCAATA+TGG | + | chr7.1:19600436-19600455 | None:intergenic | 35.0% | |
| ATTGAGTTTATGCACTGAGA+AGG | - | chr7.1:19599915-19599934 | MS.gene067792:CDS | 35.0% | |
| CATTGACAAAGTAGGAAAAG+GGG | + | chr7.1:19600877-19600896 | None:intergenic | 35.0% | |
| GAAAATGCGAAAAGAAATCG+AGG | - | chr7.1:19599876-19599895 | MS.gene067792:CDS | 35.0% | |
| GGATCATATAGTCCTTCTTA+TGG | + | chr7.1:19601137-19601156 | None:intergenic | 35.0% | |
| GTAGGTTCATTTGGATCAAT+GGG | + | chr7.1:19601177-19601196 | None:intergenic | 35.0% | |
| TAAGGCAATCCATTACTCTT+TGG | + | chr7.1:19600070-19600089 | None:intergenic | 35.0% | |
| TAATCAAGTCTCTTCGATTG+AGG | + | chr7.1:19601063-19601082 | None:intergenic | 35.0% | |
| TACATACTGTGTTTGTCATC+AGG | - | chr7.1:19601194-19601213 | MS.gene067792:intron | 35.0% | |
| TGATGACAAACACAGTATGT+AGG | + | chr7.1:19601195-19601214 | None:intergenic | 35.0% | |
| TGTAGGTTCATTTGGATCAA+TGG | + | chr7.1:19601178-19601197 | None:intergenic | 35.0% | |
| ! | TATAGTTTCAAGTCTCCTTG+TGG | - | chr7.1:19601248-19601267 | MS.gene067792:intron | 35.0% |
| !! | AGAGTAATGGATTGCCTTAA+TGG | - | chr7.1:19600071-19600090 | MS.gene067792:intron | 35.0% |
| !! | AGCAAACAGGAATGTTGTTT+TGG | - | chr7.1:19600815-19600834 | MS.gene067792:intron | 35.0% |
| !! | ATGGGTTGATCAATATCCAT+AGG | + | chr7.1:19601159-19601178 | None:intergenic | 35.0% |
| !! | TCTGCTTTAAGTTGTTTGAG+AGG | - | chr7.1:19600357-19600376 | MS.gene067792:intron | 35.0% |
| !! | TGGGTTGATCAATATCCATA+GGG | + | chr7.1:19601158-19601177 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGCTTTGATGGCT+TGG | - | chr7.1:19599975-19599994 | MS.gene067792:intron | 35.0% |
| !!! | TTTTCAGGTTTAGGGACAAT+AGG | + | chr7.1:19601018-19601037 | None:intergenic | 35.0% |
| AAAAGAAATCGAGGCGAATC+AGG | - | chr7.1:19599885-19599904 | MS.gene067792:CDS | 40.0% | |
| AACACAAGAGACAAGGTTCA+AGG | - | chr7.1:19601518-19601537 | MS.gene067792:intron | 40.0% | |
| ACACAAGAGACAAGGTTCAA+GGG | - | chr7.1:19601519-19601538 | MS.gene067792:intron | 40.0% | |
| AGTAGGAAAAGGGGAATTTC+AGG | + | chr7.1:19600868-19600887 | None:intergenic | 40.0% | |
| AGTCTACGTCGATGACTATT+TGG | - | chr7.1:19599383-19599402 | MS.gene067792:CDS | 40.0% | |
| ATTCACATGACTCCCAAGAT+AGG | + | chr7.1:19600408-19600427 | None:intergenic | 40.0% | |
| CCATGTAAAACGACTTGATG+AGG | - | chr7.1:19600521-19600540 | MS.gene067792:intron | 40.0% | |
| CTTTAGATCTTCAGCGAAGT+AGG | + | chr7.1:19600553-19600572 | None:intergenic | 40.0% | |
| GAAGGACTATATGATCCCTA+TGG | - | chr7.1:19601140-19601159 | MS.gene067792:CDS | 40.0% | |
| GATGATTGCAGATCCTATCT+TGG | - | chr7.1:19600392-19600411 | MS.gene067792:CDS | 40.0% | |
| GTAGGAAAAGGGGAATTTCA+GGG | + | chr7.1:19600867-19600886 | None:intergenic | 40.0% | |
| GTGGTAGTAATCTGCAAGTT+GGG | + | chr7.1:19601557-19601576 | None:intergenic | 40.0% | |
| GTTTAGGGACAATAGGAAGT+GGG | + | chr7.1:19601011-19601030 | None:intergenic | 40.0% | |
| TAGGAAAAGGGGAATTTCAG+GGG | + | chr7.1:19600866-19600885 | None:intergenic | 40.0% | |
| TCACTGTACAATTCATCTCG+AGG | - | chr7.1:19600233-19600252 | MS.gene067792:intron | 40.0% | |
| TGAACCTTGTCTCTTGTGTT+AGG | + | chr7.1:19601518-19601537 | None:intergenic | 40.0% | |
| TGGGGGAAAAATTAGGGTTA+GGG | + | chr7.1:19599447-19599466 | None:intergenic | 40.0% | |
| TGGTTCCACTATTCATGTGT+TGG | - | chr7.1:19601492-19601511 | MS.gene067792:intron | 40.0% | |
| TGTGGTAGTAATCTGCAAGT+TGG | + | chr7.1:19601558-19601577 | None:intergenic | 40.0% | |
| TTAGGCCAACACATGAATAG+TGG | + | chr7.1:19601500-19601519 | None:intergenic | 40.0% | |
| TTGGGGGAAAAATTAGGGTT+AGG | + | chr7.1:19599448-19599467 | None:intergenic | 40.0% | |
| TTTAGGGACAATAGGAAGTG+GGG | + | chr7.1:19601010-19601029 | None:intergenic | 40.0% | |
| ! | TTCGCTGAAGATCTAAAGCA+AGG | - | chr7.1:19600555-19600574 | MS.gene067792:intron | 40.0% |
| !! | AGCAGACAAAGTACTGTATG+GGG | - | chr7.1:19599767-19599786 | MS.gene067792:CDS | 40.0% |
| !! | ATGCACTGAGAAGGTTTTGT+TGG | - | chr7.1:19599924-19599943 | MS.gene067792:CDS | 40.0% |
| !! | CAGCAGACAAAGTACTGTAT+GGG | - | chr7.1:19599766-19599785 | MS.gene067792:CDS | 40.0% |
| !! | CCTCATCAAGTCGTTTTACA+TGG | + | chr7.1:19600524-19600543 | None:intergenic | 40.0% |
| !! | TCATCTCATGGCTCTAAGAA+GGG | - | chr7.1:19599793-19599812 | MS.gene067792:CDS | 40.0% |
| !! | TGTTATTCTTGATAGTGCCG+AGG | - | chr7.1:19601462-19601481 | MS.gene067792:intron | 40.0% |
| AGACAAGGTTCAAGGGAAAG+TGG | - | chr7.1:19601526-19601545 | MS.gene067792:intron | 45.0% | |
| GGTTTAGGGACAATAGGAAG+TGG | + | chr7.1:19601012-19601031 | None:intergenic | 45.0% | |
| TAGTCCTTCTTATGGCTTCC+TGG | + | chr7.1:19601129-19601148 | None:intergenic | 45.0% | |
| TGAACTTTGCTCTCTTGTGC+TGG | - | chr7.1:19601381-19601400 | MS.gene067792:CDS | 45.0% | |
| TGATTACAGGGAGAGAGACT+GGG | - | chr7.1:19601077-19601096 | MS.gene067792:CDS | 45.0% | |
| TGTATGGGGTTCTCATCTCA+TGG | - | chr7.1:19599781-19599800 | MS.gene067792:CDS | 45.0% | |
| TTAGGGACAATAGGAAGTGG+GGG | + | chr7.1:19601009-19601028 | None:intergenic | 45.0% | |
| TTGATTACAGGGAGAGAGAC+TGG | - | chr7.1:19601076-19601095 | MS.gene067792:CDS | 45.0% | |
| TTGGCCTAACACAAGAGACA+AGG | - | chr7.1:19601511-19601530 | MS.gene067792:intron | 45.0% | |
| ! | CTTTGATGGCTTGGACAAGA+GGG | - | chr7.1:19599984-19600003 | MS.gene067792:intron | 45.0% |
| !! | CTCATCTCATGGCTCTAAGA+AGG | - | chr7.1:19599792-19599811 | MS.gene067792:CDS | 45.0% |
| !! | GCAGCAGACAAAGTACTGTA+TGG | - | chr7.1:19599765-19599784 | MS.gene067792:CDS | 45.0% |
| !! | TATTCTTGATAGTGCCGAGG+AGG | - | chr7.1:19601465-19601484 | MS.gene067792:intron | 45.0% |
| AAGCTCAGCGGGCAATGTAT+TGG | + | chr7.1:19599521-19599540 | None:intergenic | 50.0% | |
| ACTTTGTCTGCTGCCTTGTC+TGG | + | chr7.1:19599759-19599778 | None:intergenic | 50.0% | |
| AGTGGAACCATTCACCTCCT+CGG | + | chr7.1:19601482-19601501 | None:intergenic | 50.0% | |
| GGCACGACAAGCATATGAAC+TGG | - | chr7.1:19599945-19599964 | MS.gene067792:CDS | 50.0% | |
| GGGATCGTTCATCGAGTTCA+CGG | + | chr7.1:19599564-19599583 | None:intergenic | 50.0% | |
| TCCACCAGGAAGCCATAAGA+AGG | - | chr7.1:19601122-19601141 | MS.gene067792:CDS | 50.0% | |
| TCCTTCTTATGGCTTCCTGG+TGG | + | chr7.1:19601126-19601145 | None:intergenic | 50.0% | |
| TCGTTCATCGAGTTCACGGA+CGG | + | chr7.1:19599560-19599579 | None:intergenic | 50.0% | |
| TTCTTATGGCTTCCTGGTGG+AGG | + | chr7.1:19601123-19601142 | None:intergenic | 50.0% | |
| TTTGAGCTAATGCCTCCACC+AGG | - | chr7.1:19601108-19601127 | MS.gene067792:CDS | 50.0% | |
| ! | GCTTTGATGGCTTGGACAAG+AGG | - | chr7.1:19599983-19600002 | MS.gene067792:intron | 50.0% |
| ! | TCCCTAAACCTGAAAAGCGC+AGG | - | chr7.1:19601022-19601041 | MS.gene067792:CDS | 50.0% |
| !! | AGAAGTCTCTGAAGCTCAGC+GGG | + | chr7.1:19599532-19599551 | None:intergenic | 50.0% |
| !! | GAGAAGTCTCTGAAGCTCAG+CGG | + | chr7.1:19599533-19599552 | None:intergenic | 50.0% |
| !!! | GCCTGCGCTTTTCAGGTTTA+GGG | + | chr7.1:19601026-19601045 | None:intergenic | 50.0% |
| !!! | TGCCTGCGCTTTTCAGGTTT+AGG | + | chr7.1:19601027-19601046 | None:intergenic | 50.0% |
| GGAAGTGGGGGAAGAATTGC+TGG | + | chr7.1:19600997-19601016 | None:intergenic | 55.0% | |
| ! | GAAAAGCGCAGGCACGCATA+TGG | - | chr7.1:19601033-19601052 | MS.gene067792:CDS | 55.0% |
| ! | GATAGTGCCGAGGAGGTGAA+TGG | - | chr7.1:19601472-19601491 | MS.gene067792:intron | 55.0% |
| ! | TATGCGTGCCTGCGCTTTTC+AGG | + | chr7.1:19601033-19601052 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 19599363 | 19601587 | 19599363 | ID=MS.gene067792 |
| chr7.1 | mRNA | 19599363 | 19601587 | 19599363 | ID=MS.gene067792.t1;Parent=MS.gene067792 |
| chr7.1 | exon | 19601542 | 19601587 | 19601542 | ID=MS.gene067792.t1.exon1;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19601542 | 19601587 | 19601542 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19601364 | 19601435 | 19601364 | ID=MS.gene067792.t1.exon2;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19601364 | 19601435 | 19601364 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19600984 | 19601204 | 19600984 | ID=MS.gene067792.t1.exon3;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19600984 | 19601204 | 19600984 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19600374 | 19600437 | 19600374 | ID=MS.gene067792.t1.exon4;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19600374 | 19600437 | 19600374 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19599735 | 19599979 | 19599735 | ID=MS.gene067792.t1.exon5;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19599735 | 19599979 | 19599735 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19599580 | 19599618 | 19599580 | ID=MS.gene067792.t1.exon6;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19599580 | 19599618 | 19599580 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| chr7.1 | exon | 19599363 | 19599473 | 19599363 | ID=MS.gene067792.t1.exon7;Parent=MS.gene067792.t1 |
| chr7.1 | CDS | 19599363 | 19599473 | 19599363 | ID=cds.MS.gene067792.t1;Parent=MS.gene067792.t1 |
| Gene Sequence |
| Protein sequence |
