Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067831.t1 | XP_024632961.1 | 84.8 | 800 | 94 | 4 | 1 | 772 | 1 | 800 | 0.00E+00 | 1355.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067831.t1 | Q9SZL8 | 27.0 | 636 | 394 | 11 | 32 | 665 | 70 | 637 | 5.7e-64 | 247.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067831.t1 | D3YBB9 | 76.9 | 774 | 159 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1194.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene067831.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067831.t1 | MTR_0558s0020 | 87.838 | 296 | 35 | 1 | 1 | 295 | 1 | 296 | 0.0 | 550 |
MS.gene067831.t1 | MTR_1g083640 | 83.451 | 284 | 31 | 1 | 1 | 268 | 1 | 284 | 5.74e-173 | 498 |
MS.gene067831.t1 | MTR_8g446020 | 73.898 | 295 | 38 | 1 | 1 | 295 | 1 | 256 | 2.42e-152 | 444 |
MS.gene067831.t1 | MTR_6g090505 | 83.966 | 237 | 38 | 0 | 65 | 301 | 1 | 237 | 7.73e-143 | 424 |
MS.gene067831.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.95e-34 | 134 |
MS.gene067831.t1 | MTR_6g090505 | 75.510 | 49 | 12 | 0 | 567 | 615 | 314 | 362 | 9.27e-11 | 64.7 |
MS.gene067831.t1 | MTR_2g014100 | 82.449 | 245 | 34 | 1 | 1 | 236 | 1 | 245 | 5.67e-142 | 418 |
MS.gene067831.t1 | MTR_0337s0040 | 72.031 | 261 | 33 | 2 | 1 | 260 | 1 | 222 | 5.21e-124 | 370 |
MS.gene067831.t1 | MTR_3g008240 | 84.729 | 203 | 30 | 1 | 1 | 202 | 1 | 203 | 1.82e-118 | 355 |
MS.gene067831.t1 | MTR_4g040430 | 84.158 | 202 | 28 | 1 | 1 | 202 | 1 | 198 | 6.22e-118 | 354 |
MS.gene067831.t1 | MTR_0337s0060 | 58.544 | 316 | 31 | 4 | 447 | 759 | 21 | 239 | 1.12e-107 | 329 |
MS.gene067831.t1 | MTR_5g071590 | 73.889 | 180 | 34 | 2 | 1 | 167 | 1 | 180 | 7.45e-90 | 280 |
MS.gene067831.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 7.70e-87 | 271 |
MS.gene067831.t1 | MTR_0019s0290 | 82.237 | 152 | 27 | 0 | 82 | 233 | 9 | 160 | 6.30e-86 | 269 |
MS.gene067831.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 618 | 772 | 1 | 158 | 1.62e-83 | 264 |
MS.gene067831.t1 | MTR_2g067090 | 77.419 | 155 | 32 | 1 | 621 | 772 | 99 | 253 | 2.60e-74 | 243 |
MS.gene067831.t1 | MTR_4g133495 | 61.538 | 182 | 44 | 2 | 576 | 754 | 88 | 246 | 3.18e-65 | 218 |
MS.gene067831.t1 | MTR_4g133340 | 61.538 | 182 | 44 | 2 | 576 | 754 | 88 | 246 | 3.18e-65 | 218 |
MS.gene067831.t1 | MTR_1281s0010 | 81.651 | 109 | 20 | 0 | 19 | 127 | 1 | 109 | 6.39e-57 | 190 |
MS.gene067831.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.19e-38 | 147 |
MS.gene067831.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 1.91e-31 | 131 |
MS.gene067831.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.81e-31 | 122 |
MS.gene067831.t1 | MTR_2g067130 | 61.728 | 81 | 25 | 2 | 695 | 772 | 46 | 123 | 3.10e-21 | 91.7 |
MS.gene067831.t1 | MTR_1g070355 | 26.852 | 324 | 216 | 6 | 41 | 362 | 80 | 384 | 2.33e-19 | 93.2 |
MS.gene067831.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 2.04e-14 | 77.0 |
MS.gene067831.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.57e-13 | 67.0 |
MS.gene067831.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 7.63e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene067831.t1 | AT4G38180 | 27.769 | 641 | 383 | 13 | 32 | 665 | 70 | 637 | 1.36e-70 | 247 |
MS.gene067831.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.39e-59 | 216 |
MS.gene067831.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.39e-59 | 216 |
MS.gene067831.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.39e-59 | 216 |
MS.gene067831.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.39e-59 | 216 |
MS.gene067831.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.39e-59 | 216 |
MS.gene067831.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 8.97e-54 | 200 |
MS.gene067831.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 8.97e-54 | 200 |
MS.gene067831.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 5.99e-53 | 196 |
MS.gene067831.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 4.51e-52 | 194 |
MS.gene067831.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 4.51e-52 | 194 |
MS.gene067831.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 4.51e-52 | 194 |
MS.gene067831.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 2.67e-50 | 188 |
MS.gene067831.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.23e-49 | 187 |
MS.gene067831.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.38e-49 | 187 |
MS.gene067831.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.38e-49 | 187 |
MS.gene067831.t1 | AT3G22170 | 22.774 | 685 | 425 | 16 | 34 | 708 | 69 | 659 | 9.88e-48 | 182 |
MS.gene067831.t1 | AT3G22170 | 22.774 | 685 | 425 | 16 | 34 | 708 | 69 | 659 | 9.88e-48 | 182 |
MS.gene067831.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.93e-46 | 178 |
MS.gene067831.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.93e-46 | 178 |
MS.gene067831.t1 | AT4G38170 | 24.532 | 481 | 295 | 13 | 235 | 703 | 24 | 448 | 8.92e-44 | 167 |
MS.gene067831.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 5.84e-42 | 163 |
MS.gene067831.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 5.84e-42 | 163 |
MS.gene067831.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 7.21e-42 | 163 |
MS.gene067831.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 7.67e-41 | 160 |
MS.gene067831.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 7.67e-41 | 160 |
MS.gene067831.t1 | AT2G32250 | 23.758 | 745 | 431 | 21 | 4 | 743 | 10 | 622 | 9.93e-40 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.45e-39 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.45e-39 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.758 | 745 | 431 | 21 | 4 | 743 | 10 | 622 | 1.49e-39 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.758 | 745 | 431 | 21 | 4 | 743 | 10 | 622 | 1.49e-39 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.758 | 745 | 431 | 21 | 4 | 743 | 10 | 622 | 1.49e-39 | 157 |
MS.gene067831.t1 | AT2G32250 | 23.588 | 708 | 407 | 18 | 41 | 743 | 3 | 581 | 8.47e-39 | 154 |
MS.gene067831.t1 | AT2G32250 | 23.588 | 708 | 407 | 18 | 41 | 743 | 3 | 581 | 8.69e-39 | 154 |
MS.gene067831.t1 | AT1G80010 | 23.758 | 644 | 386 | 23 | 41 | 662 | 101 | 661 | 3.06e-36 | 146 |
MS.gene067831.t1 | AT1G52520 | 22.080 | 625 | 407 | 16 | 41 | 662 | 91 | 638 | 1.50e-33 | 138 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.64e-27 | 119 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.35e-12 | 71.2 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.65e-27 | 118 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.18e-12 | 71.2 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.81e-27 | 119 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.24e-12 | 71.2 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.81e-27 | 119 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.24e-12 | 71.2 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.85e-27 | 119 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.55e-12 | 70.9 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.88e-27 | 118 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.32e-12 | 71.2 |
MS.gene067831.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.88e-27 | 118 |
MS.gene067831.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.32e-12 | 71.2 |
MS.gene067831.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.42e-22 | 103 |
MS.gene067831.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 8.27e-22 | 100 |
Find 117 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7.1:-19238054 | MS.gene067831:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.1:-19238363 | MS.gene067831:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7.1:+19237228 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.1:-19238096 | MS.gene067831:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.1:-19239147 | MS.gene067831:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7.1:-19238644 | MS.gene067831:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.1:-19238611 | MS.gene067831:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.1:+19238517 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7.1:+19237234 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7.1:-19238322 | MS.gene067831:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7.1:-19237382 | MS.gene067831:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7.1:+19238499 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.1:+19239097 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7.1:-19237799 | MS.gene067831:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.1:-19238222 | MS.gene067831:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.1:-19239090 | MS.gene067831:intron |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.1:-19239098 | MS.gene067831:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.1:-19238223 | MS.gene067831:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7.1:+19237506 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.1:+19239627 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7.1:-19237242 | MS.gene067831:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7.1:+19237252 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.1:-19237922 | MS.gene067831:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.1:-19237357 | MS.gene067831:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7.1:-19239856 | MS.gene067831:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.1:-19237674 | MS.gene067831:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7.1:+19237751 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.1:-19239785 | MS.gene067831:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.425120 | 7.1:-19237390 | MS.gene067831:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7.1:+19237750 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.1:-19239450 | MS.gene067831:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7.1:-19239568 | MS.gene067831:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7.1:+19238506 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.1:-19239585 | MS.gene067831:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7.1:+19237573 | None:intergenic |
CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 7.1:-19239702 | MS.gene067831:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7.1:-19239420 | MS.gene067831:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7.1:-19239931 | MS.gene067831:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.1:-19238432 | MS.gene067831:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7.1:-19238268 | MS.gene067831:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.1:-19237673 | MS.gene067831:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.1:-19239736 | MS.gene067831:CDS |
GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 7.1:-19237716 | MS.gene067831:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7.1:-19239375 | MS.gene067831:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.1:+19237920 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.1:+19239591 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.1:-19239798 | MS.gene067831:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7.1:-19239307 | MS.gene067831:CDS |
ATGTCTGTGAACCATCTGTT+GGG | 0.488294 | 7.1:-19237281 | MS.gene067831:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7.1:+19239480 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.1:-19239742 | MS.gene067831:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.1:-19237906 | MS.gene067831:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.1:+19238631 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7.1:-19238321 | MS.gene067831:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.1:-19239294 | MS.gene067831:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.1:-19238082 | MS.gene067831:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.1:+19238002 | None:intergenic |
AATGAAGCTCTTTCGAAACC+AGG | 0.496588 | 7.1:-19239240 | MS.gene067831:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7.1:-19239388 | MS.gene067831:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.1:+19239202 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7.1:+19239492 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.1:-19238235 | MS.gene067831:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.1:-19237737 | MS.gene067831:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7.1:+19239336 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7.1:-19238063 | MS.gene067831:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.1:-19238217 | MS.gene067831:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7.1:-19239532 | MS.gene067831:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7.1:+19237757 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.1:+19238114 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 7.1:-19239691 | MS.gene067831:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.1:-19237736 | MS.gene067831:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7.1:+19237925 | None:intergenic |
AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 7.1:-19237717 | MS.gene067831:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.1:+19238119 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.1:-19237905 | MS.gene067831:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.1:-19239690 | MS.gene067831:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7.1:-19239866 | MS.gene067831:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7.1:+19238486 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7.1:-19237516 | MS.gene067831:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7.1:-19239907 | MS.gene067831:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7.1:-19239372 | MS.gene067831:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.1:-19237430 | MS.gene067831:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7.1:-19239533 | MS.gene067831:CDS |
ATTCCTCAACGGTGTTCTTG+AGG | 0.575305 | 7.1:-19237394 | MS.gene067831:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.1:+19238001 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7.1:+19237270 | None:intergenic |
TCAACGGTGTTCTTGAGGCA+GGG | 0.583882 | 7.1:-19237389 | MS.gene067831:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.1:+19237980 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7.1:-19239942 | MS.gene067831:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7.1:-19239381 | MS.gene067831:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7.1:-19238500 | MS.gene067831:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 7.1:-19237767 | MS.gene067831:CDS |
GATGTCTGTGAACCATCTGT+TGG | 0.595331 | 7.1:-19237282 | MS.gene067831:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7.1:+19237314 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7.1:-19239301 | MS.gene067831:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7.1:-19239387 | MS.gene067831:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7.1:-19239298 | MS.gene067831:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.1:-19237427 | MS.gene067831:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.1:-19238004 | MS.gene067831:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.1:-19237919 | MS.gene067831:CDS |
TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 7.1:+19237482 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.1:+19239642 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7.1:+19238266 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7.1:-19239367 | MS.gene067831:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7.1:+19237752 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.1:-19238431 | MS.gene067831:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7.1:+19237509 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.1:-19238081 | MS.gene067831:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.1:+19237531 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.1:+19237960 | None:intergenic |
CTGCCTCAAGAACACCGTTG+AGG | 0.660876 | 7.1:+19237391 | None:intergenic |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.1:+19237655 | None:intergenic |
GCATCTGAAATATTCCTCAA+CGG | 0.665484 | 7.1:-19237405 | MS.gene067831:CDS |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7.1:-19238504 | MS.gene067831:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.1:-19237672 | MS.gene067831:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7.1:-19237821 | MS.gene067831:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7.1:-19237820 | MS.gene067831:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACCATAATTATAGTTTAA+TGG | + | chr7.1:19239715-19239734 | None:intergenic | 15.0% |
!! | AAACCATTAAACTATAATTA+TGG | - | chr7.1:19239709-19239728 | MS.gene067831:CDS | 15.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr7.1:19239503-19239522 | MS.gene067831:CDS | 15.0% |
!! | ATGTCTATAAGATATATAAG+TGG | - | chr7.1:19237072-19237091 | MS.gene067831:intron | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr7.1:19236863-19236882 | MS.gene067831:intron | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | - | chr7.1:19237073-19237092 | MS.gene067831:intron | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr7.1:19236807-19236826 | MS.gene067831:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr7.1:19237690-19237709 | MS.gene067831:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr7.1:19238312-19238331 | MS.gene067831:CDS | 20.0% |
!!! | CTATACATTTTCACATTTTT+TGG | - | chr7.1:19239646-19239665 | MS.gene067831:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr7.1:19237662-19237681 | MS.gene067831:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr7.1:19238150-19238169 | None:intergenic | 25.0% |
! | AATTCTTGATTGTTATGCAT+TGG | - | chr7.1:19239601-19239620 | MS.gene067831:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr7.1:19236869-19236888 | MS.gene067831:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr7.1:19237507-19237526 | MS.gene067831:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr7.1:19237533-19237552 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | + | chr7.1:19238683-19238702 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | - | chr7.1:19236739-19236758 | MS.gene067831:intron | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr7.1:19238509-19238528 | MS.gene067831:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr7.1:19236698-19236717 | MS.gene067831:intron | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr7.1:19237580-19237599 | MS.gene067831:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr7.1:19238648-19238667 | None:intergenic | 25.0% |
! | TGATGCTTTAACTAAAAAAG+CGG | - | chr7.1:19239534-19239553 | MS.gene067831:CDS | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | - | chr7.1:19238683-19238702 | MS.gene067831:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr7.1:19238242-19238261 | MS.gene067831:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr7.1:19237682-19237701 | MS.gene067831:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr7.1:19237938-19237957 | MS.gene067831:CDS | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | - | chr7.1:19239620-19239639 | MS.gene067831:CDS | 25.0% |
!! | TTTTCAATTACTGAGTTAAG+TGG | - | chr7.1:19239743-19239762 | MS.gene067831:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr7.1:19238784-19238803 | MS.gene067831:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr7.1:19236859-19236878 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr7.1:19237689-19237708 | MS.gene067831:CDS | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr7.1:19237185-19237204 | MS.gene067831:intron | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr7.1:19238316-19238335 | MS.gene067831:CDS | 25.0% |
!!! | TGGTTTTAACGCATTTAATT+TGG | - | chr7.1:19239666-19239685 | MS.gene067831:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr7.1:19238785-19238804 | MS.gene067831:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr7.1:19237753-19237772 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr7.1:19236915-19236934 | MS.gene067831:intron | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr7.1:19237515-19237534 | MS.gene067831:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr7.1:19239363-19239382 | MS.gene067831:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr7.1:19238283-19238302 | MS.gene067831:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr7.1:19237218-19237237 | MS.gene067831:intron | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | - | chr7.1:19236663-19236682 | MS.gene067831:intron | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr7.1:19238284-19238303 | MS.gene067831:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr7.1:19237977-19237996 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr7.1:19238856-19238875 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr7.1:19237458-19237477 | MS.gene067831:CDS | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | - | chr7.1:19236903-19236922 | MS.gene067831:intron | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | + | chr7.1:19238688-19238707 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr7.1:19237619-19237638 | MS.gene067831:CDS | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | - | chr7.1:19238686-19238705 | MS.gene067831:intron | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr7.1:19238198-19238217 | MS.gene067831:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr7.1:19238857-19238876 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr7.1:19237511-19237530 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr7.1:19237004-19237023 | MS.gene067831:intron | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr7.1:19236749-19236768 | MS.gene067831:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr7.1:19238494-19238513 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr7.1:19236914-19236933 | MS.gene067831:intron | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr7.1:19237386-19237405 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr7.1:19238628-19238647 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr7.1:19239374-19239393 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr7.1:19237272-19237291 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr7.1:19237897-19237916 | MS.gene067831:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr7.1:19237116-19237135 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr7.1:19237037-19237056 | MS.gene067831:intron | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | - | chr7.1:19238743-19238762 | MS.gene067831:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr7.1:19237262-19237281 | MS.gene067831:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr7.1:19238091-19238110 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr7.1:19238141-19238160 | MS.gene067831:CDS | 30.0% |
! | TCAGTTTTCAATTCAATGAG+TGG | + | chr7.1:19239887-19239906 | None:intergenic | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7.1:19239356-19239375 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | - | chr7.1:19238968-19238987 | MS.gene067831:intron | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr7.1:19238868-19238887 | MS.gene067831:intron | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr7.1:19237594-19237613 | MS.gene067831:CDS | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr7.1:19239248-19239267 | MS.gene067831:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr7.1:19238869-19238888 | MS.gene067831:intron | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr7.1:19238965-19238984 | MS.gene067831:intron | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | - | chr7.1:19237420-19237439 | MS.gene067831:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | - | chr7.1:19237421-19237440 | MS.gene067831:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr7.1:19239033-19239052 | MS.gene067831:intron | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr7.1:19238153-19238172 | MS.gene067831:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr7.1:19238523-19238542 | MS.gene067831:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr7.1:19236820-19236839 | MS.gene067831:intron | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr7.1:19238524-19238543 | MS.gene067831:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr7.1:19237155-19237174 | MS.gene067831:intron | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr7.1:19238858-19238877 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr7.1:19237003-19237022 | MS.gene067831:intron | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr7.1:19238370-19238389 | MS.gene067831:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr7.1:19236998-19237017 | MS.gene067831:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr7.1:19239429-19239448 | MS.gene067831:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr7.1:19237217-19237236 | MS.gene067831:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr7.1:19236940-19236959 | MS.gene067831:intron | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr7.1:19237298-19237317 | MS.gene067831:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | + | chr7.1:19237729-19237748 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr7.1:19236981-19237000 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr7.1:19237994-19238013 | MS.gene067831:CDS | 35.0% |
! | CGAGGCTTTAACAAATTAAG+CGG | - | chr7.1:19239472-19239491 | MS.gene067831:CDS | 35.0% |
! | GAGGCTTTAACAAATTAAGC+GGG | - | chr7.1:19239473-19239492 | MS.gene067831:CDS | 35.0% |
! | GCATCTGAAATATTCCTCAA+CGG | - | chr7.1:19239200-19239219 | MS.gene067831:CDS | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | - | chr7.1:19238806-19238825 | MS.gene067831:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr7.1:19238453-19238472 | MS.gene067831:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr7.1:19237600-19237619 | MS.gene067831:CDS | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | - | chr7.1:19238326-19238345 | MS.gene067831:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr7.1:19238166-19238185 | MS.gene067831:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr7.1:19239302-19239321 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr7.1:19239035-19239054 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr7.1:19238383-19238402 | MS.gene067831:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr7.1:19238975-19238994 | MS.gene067831:intron | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr7.1:19238037-19238056 | MS.gene067831:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr7.1:19239036-19239055 | MS.gene067831:intron | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr7.1:19238489-19238508 | None:intergenic | 40.0% | |
AATGAAGCTCTTTCGAAACC+AGG | - | chr7.1:19237365-19237384 | MS.gene067831:CDS | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr7.1:19237847-19237866 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr7.1:19239380-19239399 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr7.1:19236674-19236693 | MS.gene067831:intron | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | - | chr7.1:19238700-19238719 | MS.gene067831:intron | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr7.1:19238932-19238951 | MS.gene067831:intron | 40.0% | |
ATGTCTGTGAACCATCTGTT+GGG | - | chr7.1:19239324-19239343 | MS.gene067831:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | - | chr7.1:19237733-19237752 | MS.gene067831:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr7.1:19238931-19238950 | MS.gene067831:intron | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | - | chr7.1:19239089-19239108 | MS.gene067831:intron | 40.0% | |
GAAGCAAAAGAAAGATGACG+AGG | - | chr7.1:19239454-19239473 | MS.gene067831:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr7.1:19239077-19239096 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | - | chr7.1:19239830-19239849 | MS.gene067831:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr7.1:19239102-19239121 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | - | chr7.1:19238699-19238718 | MS.gene067831:intron | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr7.1:19238101-19238120 | MS.gene067831:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr7.1:19237843-19237862 | MS.gene067831:CDS | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | + | chr7.1:19237432-19237451 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr7.1:19238102-19238121 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | - | chr7.1:19237961-19237980 | MS.gene067831:CDS | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | - | chr7.1:19238838-19238857 | MS.gene067831:intron | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | + | chr7.1:19239099-19239118 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr7.1:19239442-19239461 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | - | chr7.1:19238551-19238570 | MS.gene067831:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr7.1:19239294-19239313 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr7.1:19238978-19238997 | MS.gene067831:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr7.1:19238382-19238401 | MS.gene067831:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr7.1:19236954-19236973 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | - | chr7.1:19237224-19237243 | MS.gene067831:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr7.1:19237307-19237326 | MS.gene067831:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr7.1:19236966-19236985 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | + | chr7.1:19238342-19238361 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr7.1:19238601-19238620 | MS.gene067831:CDS | 45.0% | |
ATTCCTCAACGGTGTTCTTG+AGG | - | chr7.1:19239211-19239230 | MS.gene067831:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr7.1:19238953-19238972 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | + | chr7.1:19237128-19237147 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr7.1:19237008-19237027 | MS.gene067831:intron | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr7.1:19237304-19237323 | MS.gene067831:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | - | chr7.1:19238542-19238561 | MS.gene067831:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr7.1:19238851-19238870 | None:intergenic | 45.0% | |
GATGTCTGTGAACCATCTGT+TGG | - | chr7.1:19239323-19239342 | MS.gene067831:CDS | 45.0% | |
TGGGTGATTCTATCTTGCCT+TGG | - | chr7.1:19237709-19237728 | MS.gene067831:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr7.1:19238933-19238952 | MS.gene067831:intron | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr7.1:19237406-19237425 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr7.1:19239223-19239242 | MS.gene067831:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr7.1:19237017-19237036 | None:intergenic | 45.0% | |
TTGATATCGTTGCGCTTCAG+TGG | + | chr7.1:19239126-19239145 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr7.1:19238405-19238424 | MS.gene067831:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr7.1:19238388-19238407 | MS.gene067831:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7.1:19237020-19237039 | MS.gene067831:intron | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr7.1:19237428-19237447 | MS.gene067831:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr7.1:19238109-19238128 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr7.1:19238105-19238124 | MS.gene067831:CDS | 50.0% | |
AGGGTTGTCACAGTCGACAT+TGG | - | chr7.1:19238888-19238907 | MS.gene067831:intron | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr7.1:19238606-19238625 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | - | chr7.1:19238337-19238356 | MS.gene067831:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+GGG | - | chr7.1:19238889-19238908 | MS.gene067831:intron | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr7.1:19238174-19238193 | MS.gene067831:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr7.1:19239175-19239194 | MS.gene067831:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr7.1:19239216-19239235 | MS.gene067831:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr7.1:19238173-19238192 | MS.gene067831:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr7.1:19239338-19239357 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr7.1:19237230-19237249 | MS.gene067831:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr7.1:19238122-19238141 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr7.1:19239215-19239234 | MS.gene067831:CDS | 55.0% | |
CTGCCTCAAGAACACCGTTG+AGG | + | chr7.1:19239217-19239236 | None:intergenic | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr7.1:19238607-19238626 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr7.1:19239229-19239248 | MS.gene067831:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr7.1:19237311-19237330 | MS.gene067831:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr7.1:19237233-19237252 | MS.gene067831:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr7.1:19239178-19239197 | MS.gene067831:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | - | chr7.1:19237238-19237257 | MS.gene067831:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 19236654 | 19239973 | 19236654 | ID=MS.gene067831 |
chr7.1 | mRNA | 19236654 | 19239973 | 19236654 | ID=MS.gene067831.t1;Parent=MS.gene067831 |
chr7.1 | exon | 19239091 | 19239973 | 19239091 | ID=MS.gene067831.t1.exon1;Parent=MS.gene067831.t1 |
chr7.1 | CDS | 19239091 | 19239973 | 19239091 | ID=cds.MS.gene067831.t1;Parent=MS.gene067831.t1 |
chr7.1 | exon | 19237223 | 19238656 | 19237223 | ID=MS.gene067831.t1.exon2;Parent=MS.gene067831.t1 |
chr7.1 | CDS | 19237223 | 19238656 | 19237223 | ID=cds.MS.gene067831.t1;Parent=MS.gene067831.t1 |
chr7.1 | exon | 19236654 | 19236673 | 19236654 | ID=MS.gene067831.t1.exon3;Parent=MS.gene067831.t1 |
chr7.1 | CDS | 19236654 | 19236673 | 19236654 | ID=cds.MS.gene067831.t1;Parent=MS.gene067831.t1 |
Gene Sequence |
Protein sequence |