Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067907.t1 | RHN44987.1 | 93.3 | 253 | 14 | 1 | 1 | 250 | 1 | 253 | 3.00E-127 | 464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067907.t1 | Q7ZZ00 | 35.4 | 229 | 127 | 6 | 13 | 227 | 49 | 270 | 4.9e-25 | 116.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067907.t1 | A0A396H268 | 93.3 | 253 | 14 | 1 | 1 | 250 | 1 | 253 | 2.2e-127 | 464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene067907.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067907.t1 | MTR_7g029095 | 79.842 | 253 | 14 | 2 | 1 | 250 | 1 | 219 | 3.79e-142 | 397 |
| MS.gene067907.t1 | MTR_7g029090 | 95.767 | 189 | 8 | 0 | 62 | 250 | 3 | 191 | 1.05e-135 | 380 |
| MS.gene067907.t1 | MTR_7g029065 | 75.676 | 111 | 25 | 2 | 133 | 242 | 429 | 538 | 2.49e-46 | 162 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067907.t1 | AT5G14140 | 61.134 | 247 | 84 | 5 | 11 | 246 | 14 | 259 | 3.16e-103 | 300 |
Find 59 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTCATGATTCTTTCTTTC+AGG | 0.183557 | 7.3:-71366264 | MS.gene067907:CDS |
| GAAGTCTTCTGTCCCATTGC+TGG | 0.271752 | 7.3:-71366413 | MS.gene067907:CDS |
| GTGTTGGAATTTACGAGAAA+TGG | 0.316280 | 7.3:+71367702 | None:intergenic |
| TGCTGGGTGTGGAGCACGTT+TGG | 0.380745 | 7.3:-71366396 | MS.gene067907:CDS |
| TTTATCCTGTGTTTCTTTGA+AGG | 0.386367 | 7.3:+71365222 | None:intergenic |
| TTCTGTCCCATTGCTGGGTG+TGG | 0.397837 | 7.3:-71366407 | MS.gene067907:CDS |
| CAAAACGGAAAATTTGAATC+CGG | 0.397939 | 7.3:+71367730 | None:intergenic |
| ATGACATGCCTTTGGTGTTA+CGG | 0.399250 | 7.3:+71365058 | None:intergenic |
| GTAAGCTTATTTCTTAGTAA+TGG | 0.406814 | 7.3:+71364987 | None:intergenic |
| TCTCAAAAGGAGGATACTTC+AGG | 0.418130 | 7.3:-71365180 | MS.gene067907:CDS |
| CGAGAAATGGGTTTCCAAAA+CGG | 0.423576 | 7.3:+71367715 | None:intergenic |
| ATGCAGTATGTCTTGCATTA+TGG | 0.426087 | 7.3:+71366348 | None:intergenic |
| TGTTGGAATTTACGAGAAAT+GGG | 0.440882 | 7.3:+71367703 | None:intergenic |
| ACTCCTTCCTCTATCAGCTT+TGG | 0.443914 | 7.3:-71365084 | MS.gene067907:CDS |
| GACTCTAGAACACACAGAAC+AGG | 0.456459 | 7.3:+71366325 | None:intergenic |
| AAGTCTTCTGTCCCATTGCT+GGG | 0.459510 | 7.3:-71366412 | MS.gene067907:CDS |
| AGCACGTTTGGCTTCAATTG+AGG | 0.468334 | 7.3:-71366384 | MS.gene067907:CDS |
| GGAGGATACTTCAGGAATGA+TGG | 0.477569 | 7.3:-71365172 | MS.gene067907:CDS |
| AGGGACAAATGACATGCCTT+TGG | 0.478422 | 7.3:+71365050 | None:intergenic |
| GGAAGTGGAAAATCAAAATC+CGG | 0.482912 | 7.3:-71367749 | MS.gene067907:CDS |
| AAAGAAAGAATCATGAGCTT+CGG | 0.485050 | 7.3:+71366268 | None:intergenic |
| TGACAAGAAGTTCTCGTTCG+AGG | 0.497533 | 7.3:+71367653 | None:intergenic |
| AATTCAAAAGCTACAAAAGT+AGG | 0.497972 | 7.3:-71365308 | MS.gene067907:CDS |
| CGTGCTCCACACCCAGCAAT+GGG | 0.505775 | 7.3:+71366401 | None:intergenic |
| ACAAGAGAAGGAACAGTTTG+AGG | 0.507962 | 7.3:-71367481 | MS.gene067907:CDS |
| CGAGCTGTTCAGCGTGGGAA+GGG | 0.513540 | 7.3:-71365027 | MS.gene067907:CDS |
| TCGAGCTGTTCAGCGTGGGA+AGG | 0.516848 | 7.3:-71365028 | MS.gene067907:CDS |
| GATTCACCTTTCTTCGCTAT+CGG | 0.518189 | 7.3:-71367679 | MS.gene067907:CDS |
| TTAATTTGAAAAGGTTGCGT+TGG | 0.527267 | 7.3:-71367517 | MS.gene067907:intron |
| GAATGCTTAGTGGAAGGTTG+CGG | 0.528977 | 7.3:-71365336 | MS.gene067907:CDS |
| ATATTAGTATGAATGCTTAG+TGG | 0.534106 | 7.3:-71365346 | MS.gene067907:intron |
| CGAAGAAAGGTGAATCGTGT+TGG | 0.535030 | 7.3:+71367686 | None:intergenic |
| TTCCCACGCTGAACAGCTCG+AGG | 0.542891 | 7.3:+71365030 | None:intergenic |
| GCGTGGGAAGGGATCTAACT+CGG | 0.545220 | 7.3:-71365016 | MS.gene067907:CDS |
| TCCCTCGAGCTGTTCAGCGT+GGG | 0.551783 | 7.3:-71365032 | MS.gene067907:CDS |
| ATTTGAATTAACACAAGAGA+AGG | 0.553168 | 7.3:-71367493 | MS.gene067907:CDS |
| GGAAGTGGAAAATGAAGCTA+TGG | 0.555991 | 7.3:-71365151 | MS.gene067907:CDS |
| CTCTGCCTTCAAAGAAACAC+AGG | 0.556458 | 7.3:-71365227 | MS.gene067907:CDS |
| GGTTGAACCAACGATGGAAG+TGG | 0.559043 | 7.3:-71367764 | None:intergenic |
| ACGTGCTCCACACCCAGCAA+TGG | 0.559174 | 7.3:+71366400 | None:intergenic |
| ACGGCGACCAAAGCTGATAG+AGG | 0.559633 | 7.3:+71365077 | None:intergenic |
| TACTTCAGGAATGATGGAAG+TGG | 0.560728 | 7.3:-71365166 | MS.gene067907:CDS |
| TAGTATGAATGCTTAGTGGA+AGG | 0.567041 | 7.3:-71365342 | MS.gene067907:CDS |
| ACTTGATACAAGAGGATGAA+AGG | 0.567423 | 7.3:-71367458 | MS.gene067907:intron |
| CGTGGGAAGGGATCTAACTC+GGG | 0.575940 | 7.3:-71365015 | MS.gene067907:CDS |
| GTCCCTCGAGCTGTTCAGCG+TGG | 0.579249 | 7.3:-71365033 | MS.gene067907:CDS |
| AGGTTACCGATAGCGAAGAA+AGG | 0.581308 | 7.3:+71367673 | None:intergenic |
| CGACCAAAGCTGATAGAGGA+AGG | 0.601809 | 7.3:+71365081 | None:intergenic |
| AGTGTCTAGATTAAATACTT+CGG | 0.602650 | 7.3:-71365112 | MS.gene067907:CDS |
| TATGCTGAGCAAACGTGATG+TGG | 0.604052 | 7.3:+71366298 | None:intergenic |
| ATCTAGACACTGCTGAAACA+AGG | 0.610308 | 7.3:+71365124 | None:intergenic |
| GTTTGAGGACTTGATACAAG+AGG | 0.614127 | 7.3:-71367466 | MS.gene067907:CDS |
| TTTGGTCGCCGTAACACCAA+AGG | 0.617378 | 7.3:-71365066 | MS.gene067907:CDS |
| ATGCTGAGCAAACGTGATGT+GGG | 0.625974 | 7.3:+71366299 | None:intergenic |
| TCCCACGCTGAACAGCTCGA+GGG | 0.633991 | 7.3:+71365031 | None:intergenic |
| AGTTGCACGTGGCTATGACA+TGG | 0.642662 | 7.3:-71366237 | MS.gene067907:intron |
| AAAGCTGATAGAGGAAGGAG+TGG | 0.665134 | 7.3:+71365086 | None:intergenic |
| TTTCAGGCAAAAGTTGCACG+TGG | 0.671699 | 7.3:-71366248 | MS.gene067907:CDS |
| TGCTGAGCAAACGTGATGTG+GGG | 0.701816 | 7.3:+71366300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATAGTAAACAAAA+AGG | + | chr7.3:71367091-71367110 | None:intergenic | 10.0% |
| !! | TCATTAAATTAAATCATATT+TGG | + | chr7.3:71366552-71366571 | None:intergenic | 10.0% |
| !! | TTGAATTTATACTTATAAAA+TGG | - | chr7.3:71366266-71366285 | MS.gene067907:CDS | 10.0% |
| !! | AAATAATAGGTATTAGAATA+AGG | - | chr7.3:71365675-71365694 | MS.gene067907:intron | 15.0% |
| !! | AAATTAAATAGAAGATAGAA+AGG | + | chr7.3:71366758-71366777 | None:intergenic | 15.0% |
| !!! | GTAAGATTTTAAATTAAAGT+AGG | + | chr7.3:71366651-71366670 | None:intergenic | 15.0% |
| !!! | TATGATTTAATTTAATGACA+TGG | - | chr7.3:71366554-71366573 | MS.gene067907:intron | 15.0% |
| !!! | TATTCTAATACCTATTATTT+TGG | + | chr7.3:71365675-71365694 | None:intergenic | 15.0% |
| !! | AAACAACCAAATTGTAAAAA+TGG | + | chr7.3:71366692-71366711 | None:intergenic | 20.0% |
| !! | AAGAAAGAAATTCATTAACA+TGG | + | chr7.3:71367064-71367083 | None:intergenic | 20.0% |
| !! | AAGCTAACATATTACTTATT+TGG | - | chr7.3:71367305-71367324 | MS.gene067907:intron | 20.0% |
| !! | AGAAAGAAATTCATTAACAT+GGG | + | chr7.3:71367063-71367082 | None:intergenic | 20.0% |
| !! | ATTTATATTCTCGATTAATG+TGG | - | chr7.3:71365374-71365393 | MS.gene067907:intron | 20.0% |
| !! | CATTATAGATAATTAACGAT+AGG | - | chr7.3:71367213-71367232 | MS.gene067907:intron | 20.0% |
| !! | TATATCTGTAATCATTTATG+TGG | - | chr7.3:71366026-71366045 | MS.gene067907:intron | 20.0% |
| !!! | ACATATGATTTTTCTCTATT+AGG | - | chr7.3:71367332-71367351 | MS.gene067907:intron | 20.0% |
| !!! | ATGATTTTGAAATCAAAGAT+TGG | + | chr7.3:71366939-71366958 | None:intergenic | 20.0% |
| !!! | ATTCTAGTTCTCAAAATAAA+AGG | + | chr7.3:71365638-71365657 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGAACTATAAGAA+AGG | + | chr7.3:71365998-71366017 | None:intergenic | 20.0% |
| !!! | TGATTTTGAAATCAAAGATT+GGG | + | chr7.3:71366938-71366957 | None:intergenic | 20.0% |
| !!! | TGTTGATAAAATATACACTT+TGG | + | chr7.3:71366145-71366164 | None:intergenic | 20.0% |
| ! | AAATAGAAGATAGAAAGGAA+AGG | + | chr7.3:71366753-71366772 | None:intergenic | 25.0% |
| ! | AAATGACAATCTCTATAACA+TGG | - | chr7.3:71367359-71367378 | MS.gene067907:intron | 25.0% |
| ! | AAGCAATATGTTACAAAATG+AGG | + | chr7.3:71366303-71366322 | None:intergenic | 25.0% |
| ! | AATTCAAAAGCTACAAAAGT+AGG | - | chr7.3:71367436-71367455 | MS.gene067907:intron | 25.0% |
| ! | AGAGTTAAGACCAAAATAAT+AGG | - | chr7.3:71365662-71365681 | MS.gene067907:intron | 25.0% |
| ! | AGTGTCTAGATTAAATACTT+CGG | - | chr7.3:71367632-71367651 | MS.gene067907:intron | 25.0% |
| ! | ATAAAAGGACTCTAGTAATA+TGG | + | chr7.3:71365623-71365642 | None:intergenic | 25.0% |
| ! | ATATTAGTATGAATGCTTAG+TGG | - | chr7.3:71367398-71367417 | MS.gene067907:intron | 25.0% |
| ! | ATTTGAATTAACACAAGAGA+AGG | - | chr7.3:71365251-71365270 | MS.gene067907:CDS | 25.0% |
| ! | GTTTGAGTAAGAACTAATAA+TGG | + | chr7.3:71365860-71365879 | None:intergenic | 25.0% |
| ! | TAAGAATATGAAGAAGAAGA+AGG | + | chr7.3:71365337-71365356 | None:intergenic | 25.0% |
| !! | TGGGTTGTTATTAGTTATTA+CGG | + | chr7.3:71367044-71367063 | None:intergenic | 25.0% |
| !! | TTTTCCTAGAAGTTAATCTT+TGG | - | chr7.3:71366241-71366260 | MS.gene067907:CDS | 25.0% |
| !!! | ACTTGCGTTTTAATTTGAAA+AGG | - | chr7.3:71365218-71365237 | MS.gene067907:CDS | 25.0% |
| !!! | GAAAGACCATTTTTACAATT+TGG | - | chr7.3:71366683-71366702 | MS.gene067907:intron | 25.0% |
| !!! | TCATATTTGAGTTTGTTAGA+AGG | - | chr7.3:71367123-71367142 | MS.gene067907:intron | 25.0% |
| AAAGAAAGAATCATGAGCTT+CGG | + | chr7.3:71366479-71366498 | None:intergenic | 30.0% | |
| AAAGATAGTCCATTAGTTAG+TGG | - | chr7.3:71366824-71366843 | MS.gene067907:intron | 30.0% | |
| AAAGCCAAAGATTAACTTCT+AGG | + | chr7.3:71366248-71366267 | None:intergenic | 30.0% | |
| ATTTGACCTATAACTTTCTC+TGG | + | chr7.3:71367193-71367212 | None:intergenic | 30.0% | |
| CAAAACGGAAAATTTGAATC+CGG | + | chr7.3:71365017-71365036 | None:intergenic | 30.0% | |
| CACAATCTTCAATAAACATG+AGG | + | chr7.3:71366219-71366238 | None:intergenic | 30.0% | |
| CCAAACAATTAAGAAGGATT+TGG | - | chr7.3:71366874-71366893 | MS.gene067907:intron | 30.0% | |
| CCAAATCCTTCTTAATTGTT+TGG | + | chr7.3:71366877-71366896 | None:intergenic | 30.0% | |
| GAACAAAAAACCTTCTCAAA+AGG | - | chr7.3:71367551-71367570 | MS.gene067907:intron | 30.0% | |
| TATAGGCCAAACAATTAAGA+AGG | - | chr7.3:71366868-71366887 | MS.gene067907:intron | 30.0% | |
| TGGTTAATAGACTTCAGTTA+AGG | - | chr7.3:71365516-71365535 | MS.gene067907:intron | 30.0% | |
| TGTTGGAATTTACGAGAAAT+GGG | + | chr7.3:71365044-71365063 | None:intergenic | 30.0% | |
| TTGTTAGAAGGAAGATCAAA+TGG | - | chr7.3:71367135-71367154 | MS.gene067907:intron | 30.0% | |
| TTTATCCTGTGTTTCTTTGA+AGG | + | chr7.3:71367525-71367544 | None:intergenic | 30.0% | |
| ! | TCTTTGAGAACAGTTAATGA+TGG | - | chr7.3:71365918-71365937 | MS.gene067907:intron | 30.0% |
| ! | TTAATTTGAAAAGGTTGCGT+TGG | - | chr7.3:71365227-71365246 | MS.gene067907:CDS | 30.0% |
| !! | GTGGTAAAACACATTTTGAT+TGG | - | chr7.3:71366045-71366064 | MS.gene067907:intron | 30.0% |
| !! | TCATAGTTGAGTTTGTTAGA+AGG | - | chr7.3:71366790-71366809 | MS.gene067907:intron | 30.0% |
| !! | TTAGCTTTACCACTAACTAA+TGG | + | chr7.3:71366836-71366855 | None:intergenic | 30.0% |
| AAACTTTATATACCTCCCAG+CGG | - | chr7.3:71365593-71365612 | MS.gene067907:intron | 35.0% | |
| ACTATATGATTGTGCTCTAG+TGG | - | chr7.3:71365496-71365515 | MS.gene067907:intron | 35.0% | |
| ACTTACCGCAAATTCAAACA+TGG | - | chr7.3:71366193-71366212 | MS.gene067907:intron | 35.0% | |
| ACTTGATACAAGAGGATGAA+AGG | - | chr7.3:71365286-71365305 | MS.gene067907:CDS | 35.0% | |
| AGAATAAGGCGTGCTAATTT+GGG | - | chr7.3:71365689-71365708 | MS.gene067907:intron | 35.0% | |
| AGCTCATGATTCTTTCTTTC+AGG | - | chr7.3:71366480-71366499 | MS.gene067907:intron | 35.0% | |
| AGTCCAATAGTTAGAGGTAA+AGG | - | chr7.3:71367163-71367182 | MS.gene067907:intron | 35.0% | |
| ATGCAGTATGTCTTGCATTA+TGG | + | chr7.3:71366399-71366418 | None:intergenic | 35.0% | |
| CAAAAAACCTTCTCAAAAGG+AGG | - | chr7.3:71367554-71367573 | MS.gene067907:intron | 35.0% | |
| CAAGTTAGACGAACACAATA+AGG | + | chr7.3:71365455-71365474 | None:intergenic | 35.0% | |
| CAATAAGGCTCGGAATATTA+AGG | + | chr7.3:71365440-71365459 | None:intergenic | 35.0% | |
| GAAGATAGTCCAATAGTTAG+AGG | - | chr7.3:71367157-71367176 | MS.gene067907:intron | 35.0% | |
| GCTAAACCAGAGAAAACTAT+AGG | - | chr7.3:71366851-71366870 | MS.gene067907:intron | 35.0% | |
| GGAAGTGGAAAATCAAAATC+CGG | - | chr7.3:71364995-71365014 | MS.gene067907:CDS | 35.0% | |
| GTAACATATTGCTTTGTGCA+GGG | - | chr7.3:71366309-71366328 | MS.gene067907:CDS | 35.0% | |
| GTCCAATAGTTAGAGGTAAA+GGG | - | chr7.3:71367164-71367183 | MS.gene067907:intron | 35.0% | |
| GTGTTGGAATTTACGAGAAA+TGG | + | chr7.3:71365045-71365064 | None:intergenic | 35.0% | |
| GTTTGAATTTGCGGTAAGTA+TGG | + | chr7.3:71366192-71366211 | None:intergenic | 35.0% | |
| TAGAATAAGGCGTGCTAATT+TGG | - | chr7.3:71365688-71365707 | MS.gene067907:intron | 35.0% | |
| TAGTAATATGGAATTCCGCT+GGG | + | chr7.3:71365611-71365630 | None:intergenic | 35.0% | |
| TAGTATGAATGCTTAGTGGA+AGG | - | chr7.3:71367402-71367421 | MS.gene067907:intron | 35.0% | |
| TATTACACAGAGATAACACG+AGG | + | chr7.3:71367014-71367033 | None:intergenic | 35.0% | |
| TGTAACATATTGCTTTGTGC+AGG | - | chr7.3:71366308-71366327 | MS.gene067907:CDS | 35.0% | |
| TTCCCTTTACCTCTAACTAT+TGG | + | chr7.3:71367169-71367188 | None:intergenic | 35.0% | |
| TTGAAAAACTCGAATGACGT+CGG | + | chr7.3:71367492-71367511 | None:intergenic | 35.0% | |
| ! | CAACAAAGTCTTTTCTCATC+AGG | + | chr7.3:71367277-71367296 | None:intergenic | 35.0% |
| ! | CGGATTCAAATTTTCCGTTT+TGG | - | chr7.3:71365015-71365034 | MS.gene067907:CDS | 35.0% |
| ! | TCGTTTTGTGGAAAGGTTAT+TGG | + | chr7.3:71366963-71366982 | None:intergenic | 35.0% |
| !!! | GTCATTCGAGTTTTTCAAGA+AGG | - | chr7.3:71367494-71367513 | MS.gene067907:CDS | 35.0% |
| AACCAATAGTTGTTCCATCC+AGG | + | chr7.3:71365573-71365592 | None:intergenic | 40.0% | |
| AACCTGGATGGAACAACTAT+TGG | - | chr7.3:71365568-71365587 | MS.gene067907:intron | 40.0% | |
| ACAAGAGAAGGAACAGTTTG+AGG | - | chr7.3:71365263-71365282 | MS.gene067907:CDS | 40.0% | |
| ACGAGAACTTCTTGTCAAAC+AGG | - | chr7.3:71365097-71365116 | MS.gene067907:CDS | 40.0% | |
| ATCTAGACACTGCTGAAACA+AGG | + | chr7.3:71367623-71367642 | None:intergenic | 40.0% | |
| CTAGTAATATGGAATTCCGC+TGG | + | chr7.3:71365612-71365631 | None:intergenic | 40.0% | |
| GATTCACCTTTCTTCGCTAT+CGG | - | chr7.3:71365065-71365084 | MS.gene067907:CDS | 40.0% | |
| GGAAGTGGAAAATGAAGCTA+TGG | - | chr7.3:71367593-71367612 | MS.gene067907:intron | 40.0% | |
| GGGAAACCAGAGAAAGTTAT+AGG | - | chr7.3:71367184-71367203 | MS.gene067907:intron | 40.0% | |
| GTTTGAGGACTTGATACAAG+AGG | - | chr7.3:71365278-71365297 | MS.gene067907:CDS | 40.0% | |
| TAGACGAACACAATAAGGCT+CGG | + | chr7.3:71365450-71365469 | None:intergenic | 40.0% | |
| TCTCAAAAGGAGGATACTTC+AGG | - | chr7.3:71367564-71367583 | MS.gene067907:intron | 40.0% | |
| TGAAAAACTCGAATGACGTC+GGG | + | chr7.3:71367491-71367510 | None:intergenic | 40.0% | |
| TGAGGCCATGTTTGAATTTG+CGG | + | chr7.3:71366201-71366220 | None:intergenic | 40.0% | |
| TGTTGGAATGTCATGCGTTT+GGG | + | chr7.3:71366990-71367009 | None:intergenic | 40.0% | |
| TTGTTGGAATGTCATGCGTT+TGG | + | chr7.3:71366991-71367010 | None:intergenic | 40.0% | |
| ! | CGAGAAATGGGTTTCCAAAA+CGG | + | chr7.3:71365032-71365051 | None:intergenic | 40.0% |
| ! | GTTTGGCCTATAGTTTTCTC+TGG | + | chr7.3:71366860-71366879 | None:intergenic | 40.0% |
| ! | TACTTCAGGAATGATGGAAG+TGG | - | chr7.3:71367578-71367597 | MS.gene067907:intron | 40.0% |
| !! | ATGACATGCCTTTGGTGTTA+CGG | + | chr7.3:71367689-71367708 | None:intergenic | 40.0% |
| !! | GAAGTATCCTCCTTTTGAGA+AGG | + | chr7.3:71367564-71367583 | None:intergenic | 40.0% |
| AAAGCTGATAGAGGAAGGAG+TGG | + | chr7.3:71367661-71367680 | None:intergenic | 45.0% | |
| AAGTCTTCTGTCCCATTGCT+GGG | - | chr7.3:71366332-71366351 | MS.gene067907:CDS | 45.0% | |
| ACTCCTTCCTCTATCAGCTT+TGG | - | chr7.3:71367660-71367679 | MS.gene067907:CDS | 45.0% | |
| AGGGACAAATGACATGCCTT+TGG | + | chr7.3:71367697-71367716 | None:intergenic | 45.0% | |
| AGGTTACCGATAGCGAAGAA+AGG | + | chr7.3:71365074-71365093 | None:intergenic | 45.0% | |
| ATAAGGCGTGCTAATTTGGG+TGG | - | chr7.3:71365692-71365711 | MS.gene067907:intron | 45.0% | |
| ATCGGAATTCGAAACCTGGA+TGG | - | chr7.3:71365556-71365575 | MS.gene067907:intron | 45.0% | |
| ATGCTGAGCAAACGTGATGT+GGG | + | chr7.3:71366448-71366467 | None:intergenic | 45.0% | |
| CAGAGATAACACGAGGTTGT+TGG | + | chr7.3:71367007-71367026 | None:intergenic | 45.0% | |
| CAGTTAAGGACGAATCGATC+AGG | - | chr7.3:71365530-71365549 | MS.gene067907:intron | 45.0% | |
| CGAAGAAAGGTGAATCGTGT+TGG | + | chr7.3:71365061-71365080 | None:intergenic | 45.0% | |
| CTCTGCCTTCAAAGAAACAC+AGG | - | chr7.3:71367517-71367536 | MS.gene067907:intron | 45.0% | |
| GAATGCTTAGTGGAAGGTTG+CGG | - | chr7.3:71367408-71367427 | MS.gene067907:intron | 45.0% | |
| GACGAATCGATCAGGAGAAT+CGG | - | chr7.3:71365538-71365557 | MS.gene067907:intron | 45.0% | |
| GAGAATCGGAATTCGAAACC+TGG | - | chr7.3:71365552-71365571 | MS.gene067907:intron | 45.0% | |
| GGAGGATACTTCAGGAATGA+TGG | - | chr7.3:71367572-71367591 | MS.gene067907:intron | 45.0% | |
| GGCTTATTCGACCTCAATCT+CGG | - | chr7.3:71365395-71365414 | MS.gene067907:intron | 45.0% | |
| TAAGGCGTGCTAATTTGGGT+GGG | - | chr7.3:71365693-71365712 | MS.gene067907:intron | 45.0% | |
| TAATATGGAATTCCGCTGGG+AGG | + | chr7.3:71365608-71365627 | None:intergenic | 45.0% | |
| TATGCTGAGCAAACGTGATG+TGG | + | chr7.3:71366449-71366468 | None:intergenic | 45.0% | |
| TGACAAGAAGTTCTCGTTCG+AGG | + | chr7.3:71365094-71365113 | None:intergenic | 45.0% | |
| TTTCAGGCAAAAGTTGCACG+TGG | - | chr7.3:71366496-71366515 | MS.gene067907:intron | 45.0% | |
| ! | AAGTCTTTTCTCATCAGGCG+AGG | + | chr7.3:71367272-71367291 | None:intergenic | 45.0% |
| ! | AGCACGTTTGGCTTCAATTG+AGG | - | chr7.3:71366360-71366379 | MS.gene067907:CDS | 45.0% |
| ! | GAAACGAATCTGAGACCTTG+AGG | + | chr7.3:71365760-71365779 | None:intergenic | 45.0% |
| !! | GACTCTAGAACACACAGAAC+AGG | + | chr7.3:71366422-71366441 | None:intergenic | 45.0% |
| !! | TCAAAATAATTATAATAATA+AGG | - | chr7.3:71365817-71365836 | MS.gene067907:intron | 5.0% |
| AGTTGCACGTGGCTATGACA+TGG | - | chr7.3:71366507-71366526 | MS.gene067907:intron | 50.0% | |
| CGACCAAAGCTGATAGAGGA+AGG | + | chr7.3:71367666-71367685 | None:intergenic | 50.0% | |
| CGTGCTAATTTGGGTGGGTA+TGG | - | chr7.3:71365698-71365717 | MS.gene067907:intron | 50.0% | |
| GAAGTCTTCTGTCCCATTGC+TGG | - | chr7.3:71366331-71366350 | MS.gene067907:CDS | 50.0% | |
| GCTAATTTGGGTGGGTATGG+TGG | - | chr7.3:71365701-71365720 | MS.gene067907:intron | 50.0% | |
| TGCTGAGCAAACGTGATGTG+GGG | + | chr7.3:71366447-71366466 | None:intergenic | 50.0% | |
| TGTCTCTGCAACCGAGATTG+AGG | + | chr7.3:71365409-71365428 | None:intergenic | 50.0% | |
| TTTCGCCCTTGTGCCAGTTT+GGG | - | chr7.3:71365776-71365795 | MS.gene067907:intron | 50.0% | |
| TTTGGTCGCCGTAACACCAA+AGG | - | chr7.3:71367678-71367697 | MS.gene067907:CDS | 50.0% | |
| ! | AATCTGAGACCTTGAGGAGG+AGG | + | chr7.3:71365754-71365773 | None:intergenic | 50.0% |
| ! | ACGAATCTGAGACCTTGAGG+AGG | + | chr7.3:71365757-71365776 | None:intergenic | 50.0% |
| ! | ATCTGAGACCTTGAGGAGGA+GGG | + | chr7.3:71365753-71365772 | None:intergenic | 50.0% |
| ! | CGTTTGGGCGTTTCGTTTTG+TGG | + | chr7.3:71366975-71366994 | None:intergenic | 50.0% |
| ! | GGGCGTTTCGTTTTGTGGAA+AGG | + | chr7.3:71366970-71366989 | None:intergenic | 50.0% |
| ACGGCGACCAAAGCTGATAG+AGG | + | chr7.3:71367670-71367689 | None:intergenic | 55.0% | |
| CGTGGGAAGGGATCTAACTC+GGG | - | chr7.3:71367729-71367748 | MS.gene067907:CDS | 55.0% | |
| CTAAGCTAGCCCTCCCAAAC+TGG | + | chr7.3:71365792-71365811 | None:intergenic | 55.0% | |
| GAATATGCCCCTCCTCCTCA+AGG | - | chr7.3:71365742-71365761 | MS.gene067907:intron | 55.0% | |
| GCGTGGGAAGGGATCTAACT+CGG | - | chr7.3:71367728-71367747 | MS.gene067907:CDS | 55.0% | |
| GTTTCGCCCTTGTGCCAGTT+TGG | - | chr7.3:71365775-71365794 | MS.gene067907:intron | 55.0% | |
| TTCTGTCCCATTGCTGGGTG+TGG | - | chr7.3:71366337-71366356 | MS.gene067907:CDS | 55.0% | |
| ! | AGGAGGAGGGGCATATTCCA+AGG | + | chr7.3:71365740-71365759 | None:intergenic | 55.0% |
| ! | TCTGAGACCTTGAGGAGGAG+GGG | + | chr7.3:71365752-71365771 | None:intergenic | 55.0% |
| ! | TTGGGTGGGTATGGTGGTGT+TGG | - | chr7.3:71365707-71365726 | MS.gene067907:intron | 55.0% |
| ACGTGCTCCACACCCAGCAA+TGG | + | chr7.3:71366347-71366366 | None:intergenic | 60.0% | |
| AGCCCTCCCAAACTGGCACA+AGG | + | chr7.3:71365785-71365804 | None:intergenic | 60.0% | |
| CGAGCTGTTCAGCGTGGGAA+GGG | - | chr7.3:71367717-71367736 | MS.gene067907:CDS | 60.0% | |
| CGTGCTCCACACCCAGCAAT+GGG | + | chr7.3:71366346-71366365 | None:intergenic | 60.0% | |
| GCCCTCCCAAACTGGCACAA+GGG | + | chr7.3:71365784-71365803 | None:intergenic | 60.0% | |
| GCCCTTGTGCCAGTTTGGGA+GGG | - | chr7.3:71365780-71365799 | MS.gene067907:intron | 60.0% | |
| TCCCACGCTGAACAGCTCGA+GGG | + | chr7.3:71367716-71367735 | None:intergenic | 60.0% | |
| TCCCTCGAGCTGTTCAGCGT+GGG | - | chr7.3:71367712-71367731 | MS.gene067907:CDS | 60.0% | |
| TCGAGCTGTTCAGCGTGGGA+AGG | - | chr7.3:71367716-71367735 | MS.gene067907:CDS | 60.0% | |
| TGCTGGGTGTGGAGCACGTT+TGG | - | chr7.3:71366348-71366367 | MS.gene067907:CDS | 60.0% | |
| TTCCCACGCTGAACAGCTCG+AGG | + | chr7.3:71367717-71367736 | None:intergenic | 60.0% | |
| !! | GTGGTGTTGGCTCGAGACCT+TGG | - | chr7.3:71365720-71365739 | MS.gene067907:intron | 60.0% |
| CGCCCTTGTGCCAGTTTGGG+AGG | - | chr7.3:71365779-71365798 | MS.gene067907:intron | 65.0% | |
| GTCCCTCGAGCTGTTCAGCG+TGG | - | chr7.3:71367711-71367730 | MS.gene067907:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 71364993 | 71367773 | 71364993 | ID=MS.gene067907 |
| chr7.3 | mRNA | 71364993 | 71367773 | 71364993 | ID=MS.gene067907.t1;Parent=MS.gene067907 |
| chr7.3 | exon | 71367657 | 71367773 | 71367657 | ID=MS.gene067907.t1.exon1;Parent=MS.gene067907.t1 |
| chr7.3 | CDS | 71367657 | 71367773 | 71367657 | ID=cds.MS.gene067907.t1;Parent=MS.gene067907.t1 |
| chr7.3 | exon | 71367459 | 71367526 | 71367459 | ID=MS.gene067907.t1.exon2;Parent=MS.gene067907.t1 |
| chr7.3 | CDS | 71367459 | 71367526 | 71367459 | ID=cds.MS.gene067907.t1;Parent=MS.gene067907.t1 |
| chr7.3 | exon | 71366238 | 71366436 | 71366238 | ID=MS.gene067907.t1.exon3;Parent=MS.gene067907.t1 |
| chr7.3 | CDS | 71366238 | 71366436 | 71366238 | ID=cds.MS.gene067907.t1;Parent=MS.gene067907.t1 |
| chr7.3 | exon | 71364993 | 71365361 | 71364993 | ID=MS.gene067907.t1.exon4;Parent=MS.gene067907.t1 |
| chr7.3 | CDS | 71364993 | 71365361 | 71364993 | ID=cds.MS.gene067907.t1;Parent=MS.gene067907.t1 |
| Gene Sequence |
| Protein sequence |
