Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068016.t1 | XP_003608402.1 | 93.4 | 334 | 21 | 1 | 1 | 333 | 1 | 334 | 3.50E-171 | 610.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068016.t1 | Q8H1G0 | 59.0 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 3.9e-46 | 186.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068016.t1 | G7JV51 | 93.4 | 334 | 21 | 1 | 1 | 333 | 1 | 334 | 2.5e-171 | 610.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene068016.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068016.t1 | MTR_4g093730 | 93.413 | 334 | 21 | 1 | 1 | 333 | 1 | 334 | 0.0 | 647 |
| MS.gene068016.t1 | MTR_3g100040 | 46.179 | 301 | 133 | 8 | 40 | 318 | 66 | 359 | 4.67e-74 | 233 |
| MS.gene068016.t1 | MTR_3g100050 | 44.697 | 264 | 132 | 7 | 5 | 268 | 33 | 282 | 2.55e-57 | 188 |
| MS.gene068016.t1 | MTR_3g100040 | 43.511 | 262 | 119 | 8 | 79 | 318 | 1 | 255 | 5.22e-56 | 183 |
| MS.gene068016.t1 | MTR_5g066510 | 54.301 | 186 | 66 | 7 | 41 | 219 | 72 | 245 | 6.58e-56 | 184 |
| MS.gene068016.t1 | MTR_5g066510 | 51.538 | 130 | 49 | 5 | 41 | 164 | 72 | 193 | 1.44e-29 | 112 |
| MS.gene068016.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 6.78e-19 | 86.3 |
| MS.gene068016.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 1.66e-18 | 85.9 |
| MS.gene068016.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 2.44e-18 | 85.5 |
| MS.gene068016.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 2.50e-18 | 86.3 |
| MS.gene068016.t1 | MTR_4g008070 | 45.570 | 79 | 36 | 1 | 140 | 211 | 1 | 79 | 4.36e-15 | 70.5 |
| MS.gene068016.t1 | MTR_4g008090 | 47.368 | 76 | 37 | 1 | 62 | 137 | 12 | 84 | 1.70e-13 | 66.6 |
| MS.gene068016.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 389 | 435 | 1.37e-12 | 68.6 |
| MS.gene068016.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 493 | 539 | 1.96e-12 | 68.6 |
| MS.gene068016.t1 | MTR_4g108880 | 64.444 | 45 | 16 | 0 | 104 | 148 | 501 | 545 | 1.07e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068016.t1 | AT1G51600 | 59.043 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 5.80e-63 | 202 |
| MS.gene068016.t1 | AT1G51600 | 59.043 | 188 | 69 | 3 | 40 | 220 | 80 | 266 | 5.80e-63 | 202 |
| MS.gene068016.t1 | AT3G21175 | 56.316 | 190 | 73 | 4 | 38 | 220 | 74 | 260 | 3.55e-61 | 197 |
| MS.gene068016.t1 | AT3G21175 | 55.789 | 190 | 76 | 3 | 38 | 220 | 74 | 262 | 3.80e-61 | 197 |
| MS.gene068016.t1 | AT4G24470 | 46.512 | 215 | 98 | 6 | 19 | 230 | 63 | 263 | 7.60e-49 | 166 |
| MS.gene068016.t1 | AT4G24470 | 46.512 | 215 | 98 | 6 | 19 | 230 | 63 | 263 | 7.60e-49 | 166 |
| MS.gene068016.t1 | AT4G24470 | 46.512 | 215 | 98 | 6 | 19 | 230 | 63 | 263 | 9.96e-49 | 166 |
| MS.gene068016.t1 | AT3G21175 | 51.079 | 139 | 63 | 3 | 38 | 174 | 74 | 209 | 3.55e-33 | 122 |
Find 80 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGGCTCATGTGGGCAAATA+AGG | 0.235102 | 4.3:+20950365 | MS.gene068016:CDS |
| CAAGCATTGCATAGAGTTCT+TGG | 0.242885 | 4.3:-20950342 | None:intergenic |
| TTGAAACTCACGTGGATTCT+AGG | 0.254647 | 4.3:-20950143 | None:intergenic |
| ACCTCTCAGCAAGCTCTTTA+CGG | 0.268811 | 4.3:-20949533 | None:intergenic |
| ACTGAATTTGAGATTCCTTT+AGG | 0.291144 | 4.3:+20952177 | MS.gene068016:CDS |
| AGCAAAACTGTCGGGACATT+TGG | 0.300350 | 4.3:+20949299 | MS.gene068016:CDS |
| ATTCCAATATGAGGATTTAC+TGG | 0.333408 | 4.3:+20952313 | MS.gene068016:CDS |
| TCCGTGAAAGCTTTGAATTA+CGG | 0.336575 | 4.3:-20949437 | None:intergenic |
| TTGGCAAAGGCTTTGTTTCA+TGG | 0.339952 | 4.3:-20951356 | None:intergenic |
| GCTGTATTGTTACTCTTAGA+TGG | 0.341296 | 4.3:+20949232 | MS.gene068016:CDS |
| GGAGATCTGCATCACTTGTT+AGG | 0.347795 | 4.3:+20949457 | MS.gene068016:CDS |
| GAACTCTATGCAATGCTTGC+GGG | 0.368924 | 4.3:+20950346 | MS.gene068016:CDS |
| TGGCAAAGGCTTTGTTTCAT+GGG | 0.392126 | 4.3:-20951355 | None:intergenic |
| GCAATGCTTGCGGGCTCATG+TGG | 0.395096 | 4.3:+20950355 | MS.gene068016:CDS |
| GCCGGTCCTCGACGCATTAC+CGG | 0.398091 | 4.3:-20950315 | None:intergenic |
| AGGGTTACAGGATAATATTA+TGG | 0.399343 | 4.3:+20952131 | MS.gene068016:intron |
| GCAAAACTGTCGGGACATTT+GGG | 0.401442 | 4.3:+20949300 | MS.gene068016:CDS |
| GAACTCACCATTTCCTTTGA+AGG | 0.410545 | 4.3:+20948691 | MS.gene068016:CDS |
| CAAGAGCATTATTCTCCACT+TGG | 0.415392 | 4.3:-20951949 | None:intergenic |
| AGATGCCAGCATTGTGGAAT+TGG | 0.421996 | 4.3:+20950279 | MS.gene068016:CDS |
| CAGCCAGTAAATCCTCATAT+TGG | 0.426340 | 4.3:-20952316 | None:intergenic |
| TATCATCTCAGGTGATTGTC+TGG | 0.433885 | 4.3:-20951385 | None:intergenic |
| CCCTTCCGTTACGCCAGAAA+AGG | 0.437686 | 4.3:+20948729 | MS.gene068016:CDS |
| AGAAAATTCATGTGCTGCAC+AGG | 0.441655 | 4.3:+20951175 | MS.gene068016:CDS |
| ACCTGCTCAATTATCATCTC+AGG | 0.443550 | 4.3:-20951396 | None:intergenic |
| GAGTGGAACAGAAGCGGTAA+TGG | 0.454383 | 4.3:-20948656 | None:intergenic |
| TCCGTAATTCAAAGCTTTCA+CGG | 0.456528 | 4.3:+20949436 | MS.gene068016:CDS |
| ATGCTGAATTCGTCTGAGAA+TGG | 0.460337 | 4.3:+20948571 | MS.gene068016:CDS |
| TGCTGAATTCGTCTGAGAAT+GGG | 0.470907 | 4.3:+20948572 | MS.gene068016:CDS |
| AATAGGATGCAACGGAAGAA+TGG | 0.473196 | 4.3:+20950048 | MS.gene068016:intron |
| GGCAAAGGCTTTGTTTCATG+GGG | 0.473835 | 4.3:-20951354 | None:intergenic |
| ACCTGAGATGATAATTGAGC+AGG | 0.476901 | 4.3:+20951395 | MS.gene068016:CDS |
| AACCTCGCCTTCAAAGGAAA+TGG | 0.478631 | 4.3:-20948698 | None:intergenic |
| CAGTTCTCCTGCTGAAAACC+AGG | 0.478700 | 4.3:+20950098 | MS.gene068016:CDS |
| AGTGGAACAGAAGCGGTAAT+GGG | 0.481649 | 4.3:-20948655 | None:intergenic |
| ATTGTTACTCTTAGATGGGC+AGG | 0.482284 | 4.3:+20949237 | MS.gene068016:CDS |
| TGCTCTTGATCTGCACGAGC+AGG | 0.491928 | 4.3:+20951964 | MS.gene068016:CDS |
| ATATTGATGATTCCAATATG+AGG | 0.497535 | 4.3:+20952304 | MS.gene068016:CDS |
| ACAGAAGCGGTAATGGGTTG+AGG | 0.500608 | 4.3:-20948649 | None:intergenic |
| GAGTGCTGTTGCTAGAATCC+TGG | 0.502422 | 4.3:-20950116 | None:intergenic |
| TTGCACCAATTCCACAATGC+TGG | 0.502619 | 4.3:-20950284 | None:intergenic |
| CTGAGAGATCTCGGCAAAGC+AGG | 0.503407 | 4.3:+20950667 | MS.gene068016:CDS |
| TTCGGTGCAGCAAAACTGTC+GGG | 0.506228 | 4.3:+20949291 | MS.gene068016:CDS |
| TGGACAGTTTGCATCATTGA+AGG | 0.506543 | 4.3:+20950068 | MS.gene068016:CDS |
| GCTCTTTACGGCAAGTGTAC+CGG | 0.507579 | 4.3:-20949521 | None:intergenic |
| AACATAAACCTCGCCTTCAA+AGG | 0.517160 | 4.3:-20948704 | None:intergenic |
| TCCGGTAATGCGTCGAGGAC+CGG | 0.522308 | 4.3:+20950314 | MS.gene068016:CDS |
| CACCATTTCCTTTGAAGGCG+AGG | 0.528900 | 4.3:+20948696 | MS.gene068016:CDS |
| CTGTATTGTTACTCTTAGAT+GGG | 0.529102 | 4.3:+20949233 | MS.gene068016:CDS |
| ACCTGATCATCAAAACCTAA+AGG | 0.529543 | 4.3:-20952192 | None:intergenic |
| TTCGTCTGAGAATGGGTCAA+TGG | 0.534504 | 4.3:+20948579 | MS.gene068016:CDS |
| GGTGATTGTCTGGCATCCAT+TGG | 0.537721 | 4.3:-20951375 | None:intergenic |
| AAAGCTTTGAATTACGGAAA+GGG | 0.538823 | 4.3:-20949431 | None:intergenic |
| AGCTACATTGGTACAGTGCA+TGG | 0.556675 | 4.3:-20948602 | None:intergenic |
| CATAGAGTTCTTGGACCAGC+CGG | 0.557209 | 4.3:-20950333 | None:intergenic |
| AAGGGAACACTGAGAGATCT+CGG | 0.561679 | 4.3:+20950658 | MS.gene068016:intron |
| GAAAGCTTTGAATTACGGAA+AGG | 0.561743 | 4.3:-20949432 | None:intergenic |
| TTTCGGTGCAGCAAAACTGT+CGG | 0.562482 | 4.3:+20949290 | MS.gene068016:CDS |
| TGAAACAAAGCCTTTGCCAA+TGG | 0.564941 | 4.3:+20951359 | MS.gene068016:CDS |
| GTCAGAAACGGAAGCTACAT+TGG | 0.567531 | 4.3:-20948614 | None:intergenic |
| GTAGCTTCCGTTTCTGACGA+AGG | 0.576494 | 4.3:+20948619 | MS.gene068016:CDS |
| GTAATGCGTCGAGGACCGGC+TGG | 0.578356 | 4.3:+20950318 | MS.gene068016:CDS |
| GTTACAGGATAATATTATGG+AGG | 0.581494 | 4.3:+20952134 | MS.gene068016:intron |
| CTGCACCGAAAAGTCAGAAG+TGG | 0.584625 | 4.3:-20949278 | None:intergenic |
| AGAACTCTATGCAATGCTTG+CGG | 0.585395 | 4.3:+20950345 | MS.gene068016:CDS |
| TGTCTGGCATCCATTGGCAA+AGG | 0.587746 | 4.3:-20951369 | None:intergenic |
| ATGTGCTGCACAGGACAAGA+AGG | 0.588693 | 4.3:+20951184 | MS.gene068016:CDS |
| ACTCACGTGGATTCTAGGAA+AGG | 0.610931 | 4.3:-20950138 | None:intergenic |
| AGTTCACTAGCACGAGAGAG+TGG | 0.611323 | 4.3:-20948673 | None:intergenic |
| TGATAACTTGTCAATCCAAG+TGG | 0.613280 | 4.3:+20951934 | MS.gene068016:CDS |
| GAACGTAGATGCCAGCATTG+TGG | 0.619610 | 4.3:+20950273 | MS.gene068016:CDS |
| CAATGCTTGCGGGCTCATGT+GGG | 0.620002 | 4.3:+20950356 | MS.gene068016:CDS |
| GCAAAGGCTTTGTTTCATGG+GGG | 0.623713 | 4.3:-20951353 | None:intergenic |
| ATTCATCTAATAGGATGCAA+CGG | 0.631265 | 4.3:+20950040 | MS.gene068016:intron |
| ACGAGAGAGTGGAACAGAAG+CGG | 0.632477 | 4.3:-20948662 | None:intergenic |
| GAGATCTCGGCAAAGCAGGA+AGG | 0.645047 | 4.3:+20950671 | MS.gene068016:CDS |
| AATTGGTGCAAAGTCTACTC+CGG | 0.650622 | 4.3:+20950296 | MS.gene068016:CDS |
| TGCACCGAAAAGTCAGAAGT+GGG | 0.670616 | 4.3:-20949277 | None:intergenic |
| TCTACTCCGGTAATGCGTCG+AGG | 0.699165 | 4.3:+20950309 | MS.gene068016:CDS |
| GCCGTAAAGAGCTTGCTGAG+AGG | 0.703271 | 4.3:+20949532 | MS.gene068016:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGGAAAAAAAAAAAAAAA+AGG | - | chr4.3:20949710-20949729 | None:intergenic | 10.0% |
| !!! | ATAGTATTACTTTTATTTTT+AGG | + | chr4.3:20951136-20951155 | MS.gene068016:intron | 10.0% |
| !!! | TATTTTGATCATTTTTTTTT+TGG | + | chr4.3:20948995-20949014 | MS.gene068016:intron | 10.0% |
| !!! | TCTTCTTTTATATTATAAAT+TGG | + | chr4.3:20949632-20949651 | MS.gene068016:intron | 10.0% |
| !!! | TTTTTTCCTTTTAAATTATT+TGG | + | chr4.3:20949719-20949738 | MS.gene068016:intron | 10.0% |
| !! | ATGAAATTAATTCATCTAAT+AGG | + | chr4.3:20950031-20950050 | MS.gene068016:intron | 15.0% |
| !! | TGAATAACATATTATATTCT+TGG | - | chr4.3:20950779-20950798 | None:intergenic | 15.0% |
| !! | TTTAAGCCAAATAATTTAAA+AGG | - | chr4.3:20949728-20949747 | None:intergenic | 15.0% |
| !!! | TTTTATATTATAAATTGGTC+TGG | + | chr4.3:20949637-20949656 | MS.gene068016:intron | 15.0% |
| !! | AAAGAAATCATACAAAAATG+AGG | - | chr4.3:20950485-20950504 | None:intergenic | 20.0% |
| !! | ACAAAGTAAATGATAGATAA+AGG | - | chr4.3:20952243-20952262 | None:intergenic | 20.0% |
| !! | ATAAGACTGATAAAAGATAA+AGG | - | chr4.3:20951312-20951331 | None:intergenic | 20.0% |
| !! | ATATTACAAATAACCAAGAT+AGG | - | chr4.3:20949875-20949894 | None:intergenic | 20.0% |
| !! | ATGTTCGGATAAAAAAATTT+AGG | - | chr4.3:20951840-20951859 | None:intergenic | 20.0% |
| !! | CAATAAAATGACATTATGTT+CGG | - | chr4.3:20951855-20951874 | None:intergenic | 20.0% |
| !! | CATTTGTTTGAAAGTTAAAA+TGG | + | chr4.3:20950174-20950193 | MS.gene068016:intron | 20.0% |
| !! | TAAATTTATGATGTTTACCA+GGG | + | chr4.3:20949399-20949418 | MS.gene068016:intron | 20.0% |
| !! | TAAGACTGATAAAAGATAAA+GGG | - | chr4.3:20951311-20951330 | None:intergenic | 20.0% |
| !! | TAGAAAATGTAATTACTACA+TGG | - | chr4.3:20951614-20951633 | None:intergenic | 20.0% |
| !! | TATTTATTTGTTTGTATTCG+TGG | + | chr4.3:20951425-20951444 | MS.gene068016:intron | 20.0% |
| !! | TTAAATTTATGATGTTTACC+AGG | + | chr4.3:20949398-20949417 | MS.gene068016:intron | 20.0% |
| !! | TTTCAAAATAACTCTTCATT+CGG | + | chr4.3:20949330-20949349 | MS.gene068016:intron | 20.0% |
| !!! | AAGGACAAATACAATTTTTT+CGG | - | chr4.3:20949691-20949710 | None:intergenic | 20.0% |
| !!! | TAATAGTTTTGTCAAGTTTT+TGG | + | chr4.3:20951760-20951779 | MS.gene068016:intron | 20.0% |
| !!! | TGTCATTTTATTGAACATTT+TGG | + | chr4.3:20951862-20951881 | MS.gene068016:intron | 20.0% |
| !!! | TTACCTTTTAGTCTTAATAT+TGG | + | chr4.3:20950205-20950224 | MS.gene068016:intron | 20.0% |
| ! | AAAAAACTTCAATTGAACGA+TGG | - | chr4.3:20948785-20948804 | None:intergenic | 25.0% |
| ! | AAAAACTTCAATTGAACGAT+GGG | - | chr4.3:20948784-20948803 | None:intergenic | 25.0% |
| ! | AAATTTATGATGTTTACCAG+GGG | + | chr4.3:20949400-20949419 | MS.gene068016:intron | 25.0% |
| ! | AACTATTATCATTATCCACA+TGG | - | chr4.3:20951748-20951767 | None:intergenic | 25.0% |
| ! | ACTATTATCATTATCCACAT+GGG | - | chr4.3:20951747-20951766 | None:intergenic | 25.0% |
| ! | ACTCTATGCAATAAAGTTTA+AGG | + | chr4.3:20948873-20948892 | MS.gene068016:intron | 25.0% |
| ! | CAATTCATTGAATAGATAGA+TGG | + | chr4.3:20951535-20951554 | MS.gene068016:intron | 25.0% |
| ! | TGGATTAAGTTTCAAATAGT+GGG | + | chr4.3:20948897-20948916 | MS.gene068016:intron | 25.0% |
| ! | TTGGATTAAGTTTCAAATAG+TGG | + | chr4.3:20948896-20948915 | MS.gene068016:intron | 25.0% |
| !! | AAATGGAAGCATATTTAAAG+AGG | - | chr4.3:20949839-20949858 | None:intergenic | 25.0% |
| !! | AATGGAAGCATATTTAAAGA+GGG | - | chr4.3:20949838-20949857 | None:intergenic | 25.0% |
| !! | ACCATTCTTGTGATTTTTAA+AGG | + | chr4.3:20949166-20949185 | MS.gene068016:intron | 25.0% |
| !! | ATATTGATGATTCCAATATG+AGG | + | chr4.3:20952304-20952323 | MS.gene068016:CDS | 25.0% |
| !! | ATTCTTGGTTACTTTATAAC+AGG | - | chr4.3:20950764-20950783 | None:intergenic | 25.0% |
| !! | GAAATTTGATGATATTACAG+AGG | - | chr4.3:20950552-20950571 | None:intergenic | 25.0% |
| !! | GTAAAAAATTGAACCTTTTC+TGG | - | chr4.3:20948745-20948764 | None:intergenic | 25.0% |
| !! | TATGCAATAAAGTTTAAGGT+TGG | + | chr4.3:20948877-20948896 | MS.gene068016:intron | 25.0% |
| !! | TATTGAACATTTTGGATCTT+CGG | + | chr4.3:20951870-20951889 | MS.gene068016:intron | 25.0% |
| !! | TCCTTTAAAAATCACAAGAA+TGG | - | chr4.3:20949170-20949189 | None:intergenic | 25.0% |
| !! | TTATTGAGAATGCAAGTTTT+TGG | + | chr4.3:20951684-20951703 | MS.gene068016:intron | 25.0% |
| !! | TTCATTTTGCATATTTTCAC+TGG | + | chr4.3:20950726-20950745 | MS.gene068016:intron | 25.0% |
| !!! | ACAAAAGTGTCATTAATTTG+TGG | - | chr4.3:20951229-20951248 | None:intergenic | 25.0% |
| !!! | AGGACAAATACAATTTTTTC+GGG | - | chr4.3:20949690-20949709 | None:intergenic | 25.0% |
| !!! | GCGTGCATAATTTTTTAATT+TGG | + | chr4.3:20951782-20951801 | MS.gene068016:intron | 25.0% |
| !!! | TAATTTGCATTGGATTTTGA+GGG | - | chr4.3:20951028-20951047 | None:intergenic | 25.0% |
| !!! | TAGGCTTTATTCAACTTAAA+TGG | - | chr4.3:20949856-20949875 | None:intergenic | 25.0% |
| !!! | TCTTAATATTGGTGCTAATA+CGG | + | chr4.3:20950216-20950235 | MS.gene068016:intron | 25.0% |
| AAAACTTCAATTGAACGATG+GGG | - | chr4.3:20948783-20948802 | None:intergenic | 30.0% | |
| AAGTTGAATAAAGCCTATCT+TGG | + | chr4.3:20949859-20949878 | MS.gene068016:intron | 30.0% | |
| ACCAATGTCACAAGAAAATA+AGG | - | chr4.3:20951283-20951302 | None:intergenic | 30.0% | |
| AGGGTTACAGGATAATATTA+TGG | + | chr4.3:20952131-20952150 | MS.gene068016:intron | 30.0% | |
| ATAAGGTGTAAAAGAAACAG+CGG | - | chr4.3:20951266-20951285 | None:intergenic | 30.0% | |
| ATTCATCTAATAGGATGCAA+CGG | + | chr4.3:20950040-20950059 | MS.gene068016:intron | 30.0% | |
| ATTCCAATATGAGGATTTAC+TGG | + | chr4.3:20952313-20952332 | MS.gene068016:CDS | 30.0% | |
| CTATTATCATTATCCACATG+GGG | - | chr4.3:20951746-20951765 | None:intergenic | 30.0% | |
| CTGTATTGTTACTCTTAGAT+GGG | + | chr4.3:20949233-20949252 | MS.gene068016:CDS | 30.0% | |
| GCACCAATATTAAGACTAAA+AGG | - | chr4.3:20950211-20950230 | None:intergenic | 30.0% | |
| GCATTCTCAATAACATGAAT+TGG | - | chr4.3:20951677-20951696 | None:intergenic | 30.0% | |
| GTTACAGGATAATATTATGG+AGG | + | chr4.3:20952134-20952153 | MS.gene068016:intron | 30.0% | |
| TATGTTATTCATTCCGCATT+CGG | + | chr4.3:20950788-20950807 | MS.gene068016:intron | 30.0% | |
| TGAAAACAGTTCGAGTATTA+GGG | + | chr4.3:20952076-20952095 | MS.gene068016:intron | 30.0% | |
| TGTGAGACAACAATATCAAT+AGG | - | chr4.3:20949609-20949628 | None:intergenic | 30.0% | |
| ! | ACTGAATTTGAGATTCCTTT+AGG | + | chr4.3:20952177-20952196 | MS.gene068016:CDS | 30.0% |
| ! | CTGGTATGTTATACTTTTGA+GGG | + | chr4.3:20952112-20952131 | MS.gene068016:intron | 30.0% |
| ! | CTTATGAGCTAATTTAAGAC+TGG | + | chr4.3:20949753-20949772 | MS.gene068016:intron | 30.0% |
| ! | GATTACACTCTAATTTGCAT+TGG | - | chr4.3:20951038-20951057 | None:intergenic | 30.0% |
| ! | GTTTAAGTTAAATTAGCCTC+AGG | + | chr4.3:20951464-20951483 | MS.gene068016:intron | 30.0% |
| ! | TCTGGTATGTTATACTTTTG+AGG | + | chr4.3:20952111-20952130 | MS.gene068016:intron | 30.0% |
| !! | AAAGCTTTGAATTACGGAAA+GGG | - | chr4.3:20949434-20949453 | None:intergenic | 30.0% |
| !! | ATATAACTTTGAAACTCACG+TGG | - | chr4.3:20950154-20950173 | None:intergenic | 30.0% |
| !! | CTAATTTGCATTGGATTTTG+AGG | - | chr4.3:20951029-20951048 | None:intergenic | 30.0% |
| !! | CTATTTGCTACCTTTTTGTT+TGG | + | chr4.3:20950994-20951013 | MS.gene068016:intron | 30.0% |
| !! | TCTTATGTGTTTTTATCCTC+AGG | + | chr4.3:20951326-20951345 | MS.gene068016:intron | 30.0% |
| !! | TTTTTGGTAGATAGACGAAA+TGG | + | chr4.3:20949011-20949030 | MS.gene068016:intron | 30.0% |
| !!! | ACCTTATTTTCTTGTGACAT+TGG | + | chr4.3:20951279-20951298 | MS.gene068016:intron | 30.0% |
| !!! | GATGTTTTGAGAAGAAAATC+CGG | + | chr4.3:20949502-20949521 | MS.gene068016:CDS | 30.0% |
| AAACTTCAATTGAACGATGG+GGG | - | chr4.3:20948782-20948801 | None:intergenic | 35.0% | |
| ACATCCAGGTTACATGAAAA+CGG | - | chr4.3:20950862-20950881 | None:intergenic | 35.0% | |
| ACCTGATCATCAAAACCTAA+AGG | - | chr4.3:20952195-20952214 | None:intergenic | 35.0% | |
| ATTAGAGTGTAATCCGTTAG+TGG | + | chr4.3:20951044-20951063 | MS.gene068016:intron | 35.0% | |
| CATCTACGTTCACTTAAGAA+TGG | - | chr4.3:20950264-20950283 | None:intergenic | 35.0% | |
| CATGATTTAACACCTAGTTC+TGG | - | chr4.3:20950462-20950481 | None:intergenic | 35.0% | |
| CTGAAAACAGTTCGAGTATT+AGG | + | chr4.3:20952075-20952094 | MS.gene068016:intron | 35.0% | |
| GCTGTATTGTTACTCTTAGA+TGG | + | chr4.3:20949232-20949251 | MS.gene068016:CDS | 35.0% | |
| GGCAAGTAATCCAAACAAAA+AGG | - | chr4.3:20951007-20951026 | None:intergenic | 35.0% | |
| GTGTGTGTGTGAGTTTATAA+TGG | - | chr4.3:20949042-20949061 | None:intergenic | 35.0% | |
| TATTTACCAACTAGAACCCA+TGG | + | chr4.3:20950507-20950526 | MS.gene068016:intron | 35.0% | |
| TCAAGAAAGAAACCTCAAAC+TGG | - | chr4.3:20951073-20951092 | None:intergenic | 35.0% | |
| TCCGTAATTCAAAGCTTTCA+CGG | + | chr4.3:20949436-20949455 | MS.gene068016:CDS | 35.0% | |
| TCCTATGCTAAGCTAACATA+AGG | - | chr4.3:20950401-20950420 | None:intergenic | 35.0% | |
| TTAAAGTGTAATGCCGAATG+CGG | - | chr4.3:20950804-20950823 | None:intergenic | 35.0% | |
| TTAGACACTAACATGTTCTG+CGG | + | chr4.3:20949978-20949997 | MS.gene068016:intron | 35.0% | |
| ! | ATGAATTGGTCTCAATTTGC+TGG | - | chr4.3:20951663-20951682 | None:intergenic | 35.0% |
| ! | ATGAGTTCTGACATACATAC+AGG | + | chr4.3:20952278-20952297 | MS.gene068016:intron | 35.0% |
| ! | ATTTGACTTATCTGCTCACA+TGG | + | chr4.3:20951500-20951519 | MS.gene068016:intron | 35.0% |
| ! | CATGAAATTCGAAGCATCTT+TGG | - | chr4.3:20951112-20951131 | None:intergenic | 35.0% |
| ! | GATGCAACACTAGAGAATTT+TGG | + | chr4.3:20950918-20950937 | MS.gene068016:intron | 35.0% |
| ! | TCCTTATGTTAGCTTAGCAT+AGG | + | chr4.3:20950397-20950416 | MS.gene068016:intron | 35.0% |
| ! | TCTAGGGTTGTTATGATCTT+TGG | + | chr4.3:20949560-20949579 | MS.gene068016:intron | 35.0% |
| ! | TGATAACTTGTCAATCCAAG+TGG | + | chr4.3:20951934-20951953 | MS.gene068016:CDS | 35.0% |
| ! | TGCTTTTGAACAGAATGAAC+TGG | + | chr4.3:20950696-20950715 | MS.gene068016:CDS | 35.0% |
| ! | TTAGGGCATTATTTGAGATC+TGG | + | chr4.3:20952093-20952112 | MS.gene068016:intron | 35.0% |
| ! | TTTAAGACTGGACAAGTAGT+TGG | + | chr4.3:20949765-20949784 | MS.gene068016:intron | 35.0% |
| ! | TTTGACTTATCTGCTCACAT+GGG | + | chr4.3:20951501-20951520 | MS.gene068016:intron | 35.0% |
| ! | TTTTCATGTAACCTGGATGT+TGG | + | chr4.3:20950862-20950881 | MS.gene068016:intron | 35.0% |
| ! | TTTTTCACCTTCGTCAGAAA+CGG | - | chr4.3:20948629-20948648 | None:intergenic | 35.0% |
| !! | ACACTAGAGAATTTTGGCAT+AGG | + | chr4.3:20950924-20950943 | MS.gene068016:intron | 35.0% |
| !! | GAAAGCTTTGAATTACGGAA+AGG | - | chr4.3:20949435-20949454 | None:intergenic | 35.0% |
| !! | GTTATACTTTTGAGGGTTAC+AGG | + | chr4.3:20952119-20952138 | MS.gene068016:intron | 35.0% |
| !! | TCCGTGAAAGCTTTGAATTA+CGG | - | chr4.3:20949440-20949459 | None:intergenic | 35.0% |
| !! | TCCTTTAGGTTTTGATGATC+AGG | + | chr4.3:20952191-20952210 | MS.gene068016:CDS | 35.0% |
| !! | TTTCAAGTTGTCACATCACA+TGG | + | chr4.3:20950889-20950908 | MS.gene068016:intron | 35.0% |
| !!! | ATAGTGGGTTTTCTACAATG+TGG | + | chr4.3:20948912-20948931 | MS.gene068016:intron | 35.0% |
| AAAAGCTCCTGTTTAAGCCA+TGG | - | chr4.3:20950527-20950546 | None:intergenic | 40.0% | |
| AAAGCTCCTGTTTAAGCCAT+GGG | - | chr4.3:20950526-20950545 | None:intergenic | 40.0% | |
| AAATGCCGATATTGTTAGGC+CGG | - | chr4.3:20949105-20949124 | None:intergenic | 40.0% | |
| AACATAAACCTCGCCTTCAA+AGG | - | chr4.3:20948707-20948726 | None:intergenic | 40.0% | |
| AAGATTTCCCAAGTCACTTC+AGG | - | chr4.3:20950589-20950608 | None:intergenic | 40.0% | |
| AAGCATCTTTGGTTGAGAAC+AGG | - | chr4.3:20951101-20951120 | None:intergenic | 40.0% | |
| AAGGCTAGCATTAGCAAGAT+TGG | - | chr4.3:20952224-20952243 | None:intergenic | 40.0% | |
| AATAGGATGCAACGGAAGAA+TGG | + | chr4.3:20950048-20950067 | MS.gene068016:intron | 40.0% | |
| AATTGGTGCAAAGTCTACTC+CGG | + | chr4.3:20950296-20950315 | MS.gene068016:CDS | 40.0% | |
| AATTTCCTCATGATAGCCTG+AGG | - | chr4.3:20951483-20951502 | None:intergenic | 40.0% | |
| ACCTGAGATGATAATTGAGC+AGG | + | chr4.3:20951395-20951414 | MS.gene068016:CDS | 40.0% | |
| ACCTGCAGTTCATTACAAAG+GGG | - | chr4.3:20949208-20949227 | None:intergenic | 40.0% | |
| ACCTGCTCAATTATCATCTC+AGG | - | chr4.3:20951399-20951418 | None:intergenic | 40.0% | |
| ACGTTCACTTAAGAATGGCA+GGG | - | chr4.3:20950259-20950278 | None:intergenic | 40.0% | |
| AGAAAATTCATGTGCTGCAC+AGG | + | chr4.3:20951175-20951194 | MS.gene068016:CDS | 40.0% | |
| AGAACTCTATGCAATGCTTG+CGG | + | chr4.3:20950345-20950364 | MS.gene068016:CDS | 40.0% | |
| AGAGGGGAAAGTCATGAAAA+GGG | + | chr4.3:20952040-20952059 | MS.gene068016:intron | 40.0% | |
| AGGTTACATGAAAACGGAAC+TGG | - | chr4.3:20950856-20950875 | None:intergenic | 40.0% | |
| ATATTTAAAGAGGGAGGCAG+GGG | - | chr4.3:20949829-20949848 | None:intergenic | 40.0% | |
| ATGCTGAATTCGTCTGAGAA+TGG | + | chr4.3:20948571-20948590 | MS.gene068016:CDS | 40.0% | |
| ATTGTTACTCTTAGATGGGC+AGG | + | chr4.3:20949237-20949256 | MS.gene068016:CDS | 40.0% | |
| CACCTGCAGTTCATTACAAA+GGG | - | chr4.3:20949209-20949228 | None:intergenic | 40.0% | |
| CAGCCAGTAAATCCTCATAT+TGG | - | chr4.3:20952319-20952338 | None:intergenic | 40.0% | |
| CATATTTAAAGAGGGAGGCA+GGG | - | chr4.3:20949830-20949849 | None:intergenic | 40.0% | |
| CATTACAAAGGGGTGATCAA+AGG | - | chr4.3:20949198-20949217 | None:intergenic | 40.0% | |
| CTAGCATTAGCAAGATTGGA+TGG | - | chr4.3:20952220-20952239 | None:intergenic | 40.0% | |
| CTCTTCATTCGGACATGTAT+TGG | + | chr4.3:20949341-20949360 | MS.gene068016:intron | 40.0% | |
| CTTGAAAAGATCCAACATCC+AGG | - | chr4.3:20950876-20950895 | None:intergenic | 40.0% | |
| GAAAGTCATGAAAAGGGTTG+AGG | + | chr4.3:20952046-20952065 | MS.gene068016:intron | 40.0% | |
| GAACTCACCATTTCCTTTGA+AGG | + | chr4.3:20948691-20948710 | MS.gene068016:CDS | 40.0% | |
| GACTTCCTACTCTTCAAATG+AGG | + | chr4.3:20952007-20952026 | MS.gene068016:intron | 40.0% | |
| GCATGGTCTGTTGATATGAA+GGG | + | chr4.3:20950640-20950659 | MS.gene068016:intron | 40.0% | |
| GGATACCTCATTTGAAGAGT+AGG | - | chr4.3:20952015-20952034 | None:intergenic | 40.0% | |
| GGCAAAATGCCGATATTGTT+AGG | - | chr4.3:20949109-20949128 | None:intergenic | 40.0% | |
| GGTTACATGAAAACGGAACT+GGG | - | chr4.3:20950855-20950874 | None:intergenic | 40.0% | |
| TACGTTCACTTAAGAATGGC+AGG | - | chr4.3:20950260-20950279 | None:intergenic | 40.0% | |
| TATCATCTCAGGTGATTGTC+TGG | - | chr4.3:20951388-20951407 | None:intergenic | 40.0% | |
| TGAAACAAAGCCTTTGCCAA+TGG | + | chr4.3:20951359-20951378 | MS.gene068016:CDS | 40.0% | |
| TGCACGACATTAGAATATGC+TGG | + | chr4.3:20949926-20949945 | MS.gene068016:intron | 40.0% | |
| TGCTGAATTCGTCTGAGAAT+GGG | + | chr4.3:20948572-20948591 | MS.gene068016:CDS | 40.0% | |
| TGGACAGTTTGCATCATTGA+AGG | + | chr4.3:20950068-20950087 | MS.gene068016:CDS | 40.0% | |
| TTGAAACTCACGTGGATTCT+AGG | - | chr4.3:20950146-20950165 | None:intergenic | 40.0% | |
| ! | AAATGAGGTATCCTTCTGAG+AGG | + | chr4.3:20952022-20952041 | MS.gene068016:intron | 40.0% |
| ! | AATGAGGTATCCTTCTGAGA+GGG | + | chr4.3:20952023-20952042 | MS.gene068016:intron | 40.0% |
| ! | AGGATTTTGCTGATGCATCT+GGG | + | chr4.3:20952154-20952173 | MS.gene068016:CDS | 40.0% |
| ! | AGTTCCGTTTTCATGTAACC+TGG | + | chr4.3:20950855-20950874 | MS.gene068016:intron | 40.0% |
| ! | CAAGCATTGCATAGAGTTCT+TGG | - | chr4.3:20950345-20950364 | None:intergenic | 40.0% |
| ! | GGAAGCATATTTAAAGAGGG+AGG | - | chr4.3:20949835-20949854 | None:intergenic | 40.0% |
| ! | TGTGCAGCACATGAATTTTC+TGG | - | chr4.3:20951176-20951195 | None:intergenic | 40.0% |
| ! | TTATGATCTTTGGTGCAGTC+TGG | + | chr4.3:20949570-20949589 | MS.gene068016:intron | 40.0% |
| ! | TTTAAGCCATGGGTTCTAGT+TGG | - | chr4.3:20950516-20950535 | None:intergenic | 40.0% |
| !! | AATTGGTCTCAATTTGCTGG+AGG | - | chr4.3:20951660-20951679 | None:intergenic | 40.0% |
| !! | ATTGGTCTCAATTTGCTGGA+GGG | - | chr4.3:20951659-20951678 | None:intergenic | 40.0% |
| !! | CAAGAGCATTATTCTCCACT+TGG | - | chr4.3:20951952-20951971 | None:intergenic | 40.0% |
| !! | TGGCAAAGGCTTTGTTTCAT+GGG | - | chr4.3:20951358-20951377 | None:intergenic | 40.0% |
| !! | TTGAACCTTTTCTGGCGTAA+CGG | - | chr4.3:20948737-20948756 | None:intergenic | 40.0% |
| !! | TTGGCAAAGGCTTTGTTTCA+TGG | - | chr4.3:20951359-20951378 | None:intergenic | 40.0% |
| AACCTCGCCTTCAAAGGAAA+TGG | - | chr4.3:20948701-20948720 | None:intergenic | 45.0% | |
| AACTCACACACACACACAAG+TGG | + | chr4.3:20949047-20949066 | MS.gene068016:intron | 45.0% | |
| AAGGGAACACTGAGAGATCT+CGG | + | chr4.3:20950658-20950677 | MS.gene068016:intron | 45.0% | |
| AAGTTCTGCACTCCAGAACT+AGG | + | chr4.3:20950447-20950466 | MS.gene068016:intron | 45.0% | |
| ACCCCTTTGTAATGAACTGC+AGG | + | chr4.3:20949204-20949223 | MS.gene068016:intron | 45.0% | |
| ACCTCTCAGCAAGCTCTTTA+CGG | - | chr4.3:20949536-20949555 | None:intergenic | 45.0% | |
| AGATGCCAGCATTGTGGAAT+TGG | + | chr4.3:20950279-20950298 | MS.gene068016:CDS | 45.0% | |
| AGCAAAACTGTCGGGACATT+TGG | + | chr4.3:20949299-20949318 | MS.gene068016:CDS | 45.0% | |
| AGCTACATTGGTACAGTGCA+TGG | - | chr4.3:20948605-20948624 | None:intergenic | 45.0% | |
| AGTGGAACAGAAGCGGTAAT+GGG | - | chr4.3:20948658-20948677 | None:intergenic | 45.0% | |
| ATTACTGACCTACGTTCGCA+TGG | + | chr4.3:20950623-20950642 | MS.gene068016:intron | 45.0% | |
| CAAGTCACTTCAGGCAAGAT+GGG | - | chr4.3:20950580-20950599 | None:intergenic | 45.0% | |
| CATCTTGCCTGAAGTGACTT+GGG | + | chr4.3:20950579-20950598 | MS.gene068016:intron | 45.0% | |
| CGCATGGTCTGTTGATATGA+AGG | + | chr4.3:20950639-20950658 | MS.gene068016:intron | 45.0% | |
| CTAGAACCCATGGCTTAAAC+AGG | + | chr4.3:20950517-20950536 | MS.gene068016:intron | 45.0% | |
| GAACTCTATGCAATGCTTGC+GGG | + | chr4.3:20950346-20950365 | MS.gene068016:CDS | 45.0% | |
| GAGAGGGGAAAGTCATGAAA+AGG | + | chr4.3:20952039-20952058 | MS.gene068016:intron | 45.0% | |
| GCAAAACTGTCGGGACATTT+GGG | + | chr4.3:20949300-20949319 | MS.gene068016:CDS | 45.0% | |
| GCACCTGCAGTTCATTACAA+AGG | - | chr4.3:20949210-20949229 | None:intergenic | 45.0% | |
| GCATATTTAAAGAGGGAGGC+AGG | - | chr4.3:20949831-20949850 | None:intergenic | 45.0% | |
| GGAGATCTGCATCACTTGTT+AGG | + | chr4.3:20949457-20949476 | MS.gene068016:CDS | 45.0% | |
| GTCAGAAACGGAAGCTACAT+TGG | - | chr4.3:20948617-20948636 | None:intergenic | 45.0% | |
| TATTTAAAGAGGGAGGCAGG+GGG | - | chr4.3:20949828-20949847 | None:intergenic | 45.0% | |
| TGCACCGAAAAGTCAGAAGT+GGG | - | chr4.3:20949280-20949299 | None:intergenic | 45.0% | |
| TGCGAACGTAGGTCAGTAAT+TGG | - | chr4.3:20950623-20950642 | None:intergenic | 45.0% | |
| TTAGTGTCTTTAGCCCCATG+TGG | + | chr4.3:20951730-20951749 | MS.gene068016:intron | 45.0% | |
| TTCGTCTGAGAATGGGTCAA+TGG | + | chr4.3:20948579-20948598 | MS.gene068016:CDS | 45.0% | |
| TTGCACCAATTCCACAATGC+TGG | - | chr4.3:20950287-20950306 | None:intergenic | 45.0% | |
| TTGCTGAGAGGTAGAGTCTA+GGG | + | chr4.3:20949544-20949563 | MS.gene068016:intron | 45.0% | |
| TTGTAATGAACTGCAGGTGC+AGG | + | chr4.3:20949210-20949229 | MS.gene068016:intron | 45.0% | |
| ! | ACTCACGTGGATTCTAGGAA+AGG | - | chr4.3:20950141-20950160 | None:intergenic | 45.0% |
| ! | ATGAGGTATCCTTCTGAGAG+GGG | + | chr4.3:20952024-20952043 | MS.gene068016:intron | 45.0% |
| ! | ATTAGCCTCAGGCTATCATG+AGG | + | chr4.3:20951475-20951494 | MS.gene068016:intron | 45.0% |
| ! | CGTACCCACTTCTGACTTTT+CGG | + | chr4.3:20949273-20949292 | MS.gene068016:CDS | 45.0% |
| ! | GAGCTAGGACTTCTGGATTT+TGG | + | chr4.3:20949133-20949152 | MS.gene068016:intron | 45.0% |
| ! | GAGGATTTTGCTGATGCATC+TGG | + | chr4.3:20952153-20952172 | MS.gene068016:CDS | 45.0% |
| ! | TTTCGGTGCAGCAAAACTGT+CGG | + | chr4.3:20949290-20949309 | MS.gene068016:CDS | 45.0% |
| !! | CTAGAATCCTGGTTTTCAGC+AGG | - | chr4.3:20950108-20950127 | None:intergenic | 45.0% |
| !! | GCAAAGGCTTTGTTTCATGG+GGG | - | chr4.3:20951356-20951375 | None:intergenic | 45.0% |
| !! | GGCAAAGGCTTTGTTTCATG+GGG | - | chr4.3:20951357-20951376 | None:intergenic | 45.0% |
| ACGAGAGAGTGGAACAGAAG+CGG | - | chr4.3:20948665-20948684 | None:intergenic | 50.0% | |
| AGTTCACTAGCACGAGAGAG+TGG | - | chr4.3:20948676-20948695 | None:intergenic | 50.0% | |
| ATGTGCTGCACAGGACAAGA+AGG | + | chr4.3:20951184-20951203 | MS.gene068016:CDS | 50.0% | |
| CAAGCTTTCACGTGAAGACG+TGG | - | chr4.3:20949803-20949822 | None:intergenic | 50.0% | |
| CAGTTCTCCTGCTGAAAACC+AGG | + | chr4.3:20950098-20950117 | MS.gene068016:CDS | 50.0% | |
| CATAGAGTTCTTGGACCAGC+CGG | - | chr4.3:20950336-20950355 | None:intergenic | 50.0% | |
| CATGACTTTCCCCTCTCAGA+AGG | - | chr4.3:20952036-20952055 | None:intergenic | 50.0% | |
| CCAAGTCACTTCAGGCAAGA+TGG | - | chr4.3:20950581-20950600 | None:intergenic | 50.0% | |
| CCATCTTGCCTGAAGTGACT+TGG | + | chr4.3:20950578-20950597 | MS.gene068016:intron | 50.0% | |
| CTCAAACTGGCGACCACTAA+CGG | - | chr4.3:20951060-20951079 | None:intergenic | 50.0% | |
| CTGCACCGAAAAGTCAGAAG+TGG | - | chr4.3:20949281-20949300 | None:intergenic | 50.0% | |
| CTTGCTGAGAGGTAGAGTCT+AGG | + | chr4.3:20949543-20949562 | MS.gene068016:intron | 50.0% | |
| GAACGTAGATGCCAGCATTG+TGG | + | chr4.3:20950273-20950292 | MS.gene068016:CDS | 50.0% | |
| GAGTGGAACAGAAGCGGTAA+TGG | - | chr4.3:20948659-20948678 | None:intergenic | 50.0% | |
| GCTCTTTACGGCAAGTGTAC+CGG | - | chr4.3:20949524-20949543 | None:intergenic | 50.0% | |
| GGCATCCGGCCTAACAATAT+CGG | + | chr4.3:20949097-20949116 | MS.gene068016:intron | 50.0% | |
| GGTGATTGTCTGGCATCCAT+TGG | - | chr4.3:20951378-20951397 | None:intergenic | 50.0% | |
| GTAGCTTCCGTTTCTGACGA+AGG | + | chr4.3:20948619-20948638 | MS.gene068016:CDS | 50.0% | |
| TCAACAGACCATGCGAACGT+AGG | - | chr4.3:20950634-20950653 | None:intergenic | 50.0% | |
| TCACACACACACACAAGTGG+AGG | + | chr4.3:20949050-20949069 | MS.gene068016:intron | 50.0% | |
| TCCAGAAGTCCTAGCTCAAC+TGG | - | chr4.3:20949130-20949149 | None:intergenic | 50.0% | |
| TCTGCGGATCTTCTCGACTT+TGG | + | chr4.3:20949994-20950013 | MS.gene068016:intron | 50.0% | |
| TGTCTGGCATCCATTGGCAA+AGG | - | chr4.3:20951372-20951391 | None:intergenic | 50.0% | |
| ! | ACACACACAAGTGGAGGTAC+CGG | + | chr4.3:20949056-20949075 | MS.gene068016:intron | 50.0% |
| ! | CACCATTTCCTTTGAAGGCG+AGG | + | chr4.3:20948696-20948715 | MS.gene068016:CDS | 50.0% |
| ! | GAGTGCTGTTGCTAGAATCC+TGG | - | chr4.3:20950119-20950138 | None:intergenic | 50.0% |
| ! | GGCATTTTGCCAGTTGAGCT+AGG | + | chr4.3:20949118-20949137 | MS.gene068016:intron | 50.0% |
| ! | TTCGGTGCAGCAAAACTGTC+GGG | + | chr4.3:20949291-20949310 | MS.gene068016:CDS | 50.0% |
| !! | ACAGAAGCGGTAATGGGTTG+AGG | - | chr4.3:20948652-20948671 | None:intergenic | 50.0% |
| !! | ACCTTTTCTGGCGTAACGGA+AGG | - | chr4.3:20948733-20948752 | None:intergenic | 50.0% |
| !! | CCTTTTCTGGCGTAACGGAA+GGG | - | chr4.3:20948732-20948751 | None:intergenic | 50.0% |
| !!! | GGAAAGGGTCATTTTTCCCC+TGG | - | chr4.3:20949419-20949438 | None:intergenic | 50.0% |
| CAATGCTTGCGGGCTCATGT+GGG | + | chr4.3:20950356-20950375 | MS.gene068016:CDS | 55.0% | |
| CACGTGAAGACGTGGCACAA+AGG | - | chr4.3:20949795-20949814 | None:intergenic | 55.0% | |
| CCCTTCCGTTACGCCAGAAA+AGG | + | chr4.3:20948729-20948748 | MS.gene068016:CDS | 55.0% | |
| CGGGCTCATGTGGGCAAATA+AGG | + | chr4.3:20950365-20950384 | MS.gene068016:CDS | 55.0% | |
| CGTTAGTGGTCGCCAGTTTG+AGG | + | chr4.3:20951058-20951077 | MS.gene068016:intron | 55.0% | |
| CTGAGAGATCTCGGCAAAGC+AGG | + | chr4.3:20950667-20950686 | MS.gene068016:CDS | 55.0% | |
| GAGATCTCGGCAAAGCAGGA+AGG | + | chr4.3:20950671-20950690 | MS.gene068016:CDS | 55.0% | |
| GCCAGTTGAGCTAGGACTTC+TGG | + | chr4.3:20949126-20949145 | MS.gene068016:intron | 55.0% | |
| GTTTCATGGGGGCTTTCCTG+AGG | - | chr4.3:20951345-20951364 | None:intergenic | 55.0% | |
| TCTACTCCGGTAATGCGTCG+AGG | + | chr4.3:20950309-20950328 | MS.gene068016:CDS | 55.0% | |
| TGCTCTTGATCTGCACGAGC+AGG | + | chr4.3:20951964-20951983 | MS.gene068016:CDS | 55.0% | |
| !! | ACACACAAGTGGAGGTACCG+GGG | + | chr4.3:20949058-20949077 | MS.gene068016:intron | 55.0% |
| !! | CACACACAAGTGGAGGTACC+GGG | + | chr4.3:20949057-20949076 | MS.gene068016:intron | 55.0% |
| !! | GCCGTAAAGAGCTTGCTGAG+AGG | + | chr4.3:20949532-20949551 | MS.gene068016:CDS | 55.0% |
| GCAATGCTTGCGGGCTCATG+TGG | + | chr4.3:20950355-20950374 | MS.gene068016:CDS | 60.0% | |
| GTTAGGCCGGATGCCATGAC+CGG | - | chr4.3:20949092-20949111 | None:intergenic | 60.0% | |
| TCCGGTAATGCGTCGAGGAC+CGG | + | chr4.3:20950314-20950333 | MS.gene068016:CDS | 60.0% | |
| TTAGGCCGGATGCCATGACC+GGG | - | chr4.3:20949091-20949110 | None:intergenic | 60.0% | |
| CATGACCGGGGTTCGAACCC+CGG | - | chr4.3:20949078-20949097 | None:intergenic | 65.0% | |
| CGAACCCCGGTCATGGCATC+CGG | + | chr4.3:20949083-20949102 | MS.gene068016:intron | 65.0% | |
| GCCGGTCCTCGACGCATTAC+CGG | - | chr4.3:20950318-20950337 | None:intergenic | 65.0% | |
| GTAATGCGTCGAGGACCGGC+TGG | + | chr4.3:20950318-20950337 | MS.gene068016:CDS | 65.0% | |
| TAGGCCGGATGCCATGACCG+GGG | - | chr4.3:20949090-20949109 | None:intergenic | 65.0% | |
| !! | AGGTACCGGGGTTCGAACCC+CGG | + | chr4.3:20949070-20949089 | MS.gene068016:intron | 65.0% |
| CGGGGTTCGAACCCCGGTCA+TGG | + | chr4.3:20949076-20949095 | MS.gene068016:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 20948565 | 20952341 | 20948565 | ID=MS.gene068016 |
| chr4.3 | mRNA | 20948565 | 20952341 | 20948565 | ID=MS.gene068016.t1;Parent=MS.gene068016 |
| chr4.3 | exon | 20948565 | 20948750 | 20948565 | ID=MS.gene068016.t1.exon1;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20948565 | 20948750 | 20948565 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20949226 | 20949321 | 20949226 | ID=MS.gene068016.t1.exon2;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20949226 | 20949321 | 20949226 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20949420 | 20949553 | 20949420 | ID=MS.gene068016.t1.exon3;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20949420 | 20949553 | 20949420 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20950053 | 20950154 | 20950053 | ID=MS.gene068016.t1.exon4;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20950053 | 20950154 | 20950053 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20950272 | 20950386 | 20950272 | ID=MS.gene068016.t1.exon5;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20950272 | 20950386 | 20950272 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20950661 | 20950717 | 20950661 | ID=MS.gene068016.t1.exon6;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20950661 | 20950717 | 20950661 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20951158 | 20951205 | 20951158 | ID=MS.gene068016.t1.exon7;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20951158 | 20951205 | 20951158 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20951348 | 20951416 | 20951348 | ID=MS.gene068016.t1.exon8;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20951348 | 20951416 | 20951348 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20951905 | 20951985 | 20951905 | ID=MS.gene068016.t1.exon9;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20951905 | 20951985 | 20951905 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20952141 | 20952212 | 20952141 | ID=MS.gene068016.t1.exon10;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20952141 | 20952212 | 20952141 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| chr4.3 | exon | 20952300 | 20952341 | 20952300 | ID=MS.gene068016.t1.exon11;Parent=MS.gene068016.t1 |
| chr4.3 | CDS | 20952300 | 20952341 | 20952300 | ID=cds.MS.gene068016.t1;Parent=MS.gene068016.t1 |
| Gene Sequence |
| Protein sequence |
