Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068189.t1 | RHN78917.1 | 94.4 | 589 | 33 | 0 | 1 | 589 | 17 | 605 | 0.00E+00 | 1109.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068189.t1 | Q10EL1 | 49.7 | 674 | 283 | 21 | 10 | 649 | 65 | 716 | 1.5e-161 | 571.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068189.t1 | A0A072TPV6 | 94.4 | 589 | 33 | 0 | 1 | 589 | 17 | 605 | 0.0e+00 | 1109.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene068189.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068189.t1 | MTR_1g050438 | 94.397 | 589 | 33 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1074 |
| MS.gene068189.t1 | MTR_0728s0020 | 94.397 | 589 | 33 | 0 | 1 | 589 | 17 | 605 | 0.0 | 1073 |
| MS.gene068189.t1 | MTR_3g029590 | 57.518 | 685 | 236 | 18 | 1 | 649 | 31 | 696 | 0.0 | 667 |
| MS.gene068189.t1 | MTR_7g092070 | 54.545 | 671 | 268 | 18 | 1 | 648 | 33 | 689 | 0.0 | 628 |
| MS.gene068189.t1 | MTR_3g435590 | 46.035 | 454 | 182 | 5 | 1 | 450 | 18 | 412 | 5.23e-131 | 394 |
| MS.gene068189.t1 | MTR_5g082830 | 35.258 | 658 | 346 | 16 | 15 | 637 | 30 | 642 | 5.29e-115 | 360 |
| MS.gene068189.t1 | MTR_5g071070 | 37.427 | 684 | 314 | 23 | 15 | 639 | 35 | 663 | 4.87e-111 | 350 |
| MS.gene068189.t1 | MTR_1g075890 | 49.096 | 332 | 148 | 4 | 14 | 343 | 32 | 344 | 1.95e-101 | 323 |
| MS.gene068189.t1 | MTR_3g435680 | 46.582 | 395 | 149 | 10 | 64 | 450 | 5 | 345 | 6.07e-99 | 308 |
| MS.gene068189.t1 | MTR_5g071070 | 37.165 | 635 | 286 | 22 | 64 | 639 | 1 | 581 | 4.99e-98 | 313 |
| MS.gene068189.t1 | MTR_3g070880 | 43.675 | 332 | 127 | 4 | 14 | 345 | 9 | 280 | 1.97e-88 | 285 |
| MS.gene068189.t1 | MTR_3g464260 | 39.655 | 348 | 147 | 8 | 1 | 345 | 11 | 298 | 1.88e-69 | 235 |
| MS.gene068189.t1 | MTR_3g464280 | 31.497 | 581 | 250 | 18 | 39 | 614 | 40 | 477 | 1.71e-58 | 205 |
| MS.gene068189.t1 | MTR_8g102100 | 61.345 | 119 | 46 | 0 | 224 | 342 | 77 | 195 | 2.27e-49 | 177 |
| MS.gene068189.t1 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 224 | 330 | 99 | 205 | 2.41e-48 | 174 |
| MS.gene068189.t1 | MTR_2g090605 | 63.063 | 111 | 41 | 0 | 228 | 338 | 77 | 187 | 7.97e-47 | 171 |
| MS.gene068189.t1 | MTR_3g103960 | 61.468 | 109 | 41 | 1 | 223 | 330 | 48 | 156 | 2.86e-45 | 162 |
| MS.gene068189.t1 | MTR_4g078660 | 57.009 | 107 | 46 | 0 | 224 | 330 | 56 | 162 | 1.38e-42 | 156 |
| MS.gene068189.t1 | MTR_3g464270 | 44.937 | 158 | 75 | 3 | 226 | 371 | 7 | 164 | 1.90e-37 | 143 |
| MS.gene068189.t1 | MTR_3g464290 | 57.143 | 98 | 41 | 1 | 205 | 301 | 77 | 174 | 3.03e-33 | 134 |
| MS.gene068189.t1 | MTR_1g050442 | 71.739 | 46 | 13 | 0 | 608 | 653 | 1 | 46 | 4.25e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068189.t1 | AT2G41900 | 49.331 | 673 | 287 | 18 | 1 | 648 | 34 | 677 | 0.0 | 555 |
| MS.gene068189.t1 | AT5G12850 | 48.250 | 657 | 284 | 21 | 5 | 636 | 32 | 657 | 2.97e-179 | 526 |
| MS.gene068189.t1 | AT5G58620 | 37.672 | 653 | 308 | 17 | 12 | 640 | 11 | 588 | 4.04e-115 | 358 |
| MS.gene068189.t1 | AT2G40140 | 35.933 | 654 | 281 | 19 | 15 | 648 | 33 | 568 | 3.70e-106 | 334 |
| MS.gene068189.t1 | AT2G40140 | 35.933 | 654 | 281 | 19 | 15 | 648 | 33 | 568 | 3.70e-106 | 334 |
| MS.gene068189.t1 | AT3G55980 | 43.855 | 358 | 159 | 5 | 15 | 367 | 30 | 350 | 7.37e-93 | 299 |
| MS.gene068189.t1 | AT3G55980 | 43.855 | 358 | 159 | 5 | 15 | 367 | 97 | 417 | 2.08e-92 | 300 |
| MS.gene068189.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 2.79e-50 | 177 |
| MS.gene068189.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 2.79e-50 | 177 |
| MS.gene068189.t1 | AT1G03790 | 59.155 | 142 | 50 | 3 | 206 | 343 | 64 | 201 | 4.73e-50 | 179 |
| MS.gene068189.t1 | AT2G19810 | 63.964 | 111 | 40 | 0 | 224 | 334 | 74 | 184 | 1.28e-48 | 174 |
| MS.gene068189.t1 | AT5G07500 | 57.851 | 121 | 51 | 0 | 210 | 330 | 34 | 154 | 1.82e-48 | 170 |
| MS.gene068189.t1 | AT4G29190 | 64.486 | 107 | 38 | 0 | 224 | 330 | 75 | 181 | 2.56e-47 | 171 |
| MS.gene068189.t1 | AT5G44260 | 55.474 | 137 | 54 | 2 | 198 | 333 | 36 | 166 | 1.81e-45 | 166 |
Find 159 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGGACCCATGGTCTTATT+TGG | 0.102678 | 1.4:+36504911 | MS.gene068189:CDS |
| GCCCTTCACTGTGCTGTTTC+TGG | 0.106828 | 1.4:+36503457 | MS.gene068189:CDS |
| ACTTTCAAGCTTTGCATATT+AGG | 0.177408 | 1.4:-36503589 | None:intergenic |
| AGTTCTGGTTTGCTTGAAAA+TGG | 0.189066 | 1.4:+36503697 | MS.gene068189:CDS |
| CAAGCCCCTTTCCTGAATTC+AGG | 0.227916 | 1.4:-36503991 | None:intergenic |
| AGACGATGCTCAACATTCTT+TGG | 0.272735 | 1.4:-36504705 | None:intergenic |
| AATTCTTGAGAAACTTCTTT+TGG | 0.276329 | 1.4:+36503612 | MS.gene068189:CDS |
| AGGCCACTGCCTTCGTTAAC+TGG | 0.276593 | 1.4:+36504156 | MS.gene068189:CDS |
| CTTCAATATGCTGAGCTCTT+TGG | 0.283674 | 1.4:+36504437 | MS.gene068189:CDS |
| TCTGTTGATTCTTCTAGTTC+TGG | 0.291419 | 1.4:+36503682 | MS.gene068189:CDS |
| GCATGCCTTGCCCTGAATTC+AGG | 0.298337 | 1.4:+36503980 | MS.gene068189:CDS |
| ACAGAGAAGTTTGCATCTTC+TGG | 0.301430 | 1.4:+36505092 | MS.gene068189:CDS |
| TTGATGGTTGCTGCCACTTA+TGG | 0.302833 | 1.4:+36503355 | MS.gene068189:CDS |
| TAGGCCTAGTTGTAATAAAA+AGG | 0.309683 | 1.4:+36504101 | MS.gene068189:CDS |
| CTCATTCTCAAGTGCTGCTT+GGG | 0.310662 | 1.4:+36504332 | MS.gene068189:CDS |
| CGATTAACGAGGCGGGGATT+TGG | 0.319247 | 1.4:+36503281 | MS.gene068189:CDS |
| ATATCTGATTGGTCGGTAAA+TGG | 0.321077 | 1.4:+36504948 | MS.gene068189:CDS |
| AATAGATTAAATTTGCGAAT+TGG | 0.323983 | 1.4:-36505126 | None:intergenic |
| AATTCAGGAAAGGGGCTTGC+AGG | 0.326756 | 1.4:+36503995 | MS.gene068189:CDS |
| TCCTAGTTCTTGTCGGTCTA+AGG | 0.332234 | 1.4:+36504509 | MS.gene068189:CDS |
| GGCTGCTGCAATGAATCTTT+TGG | 0.332820 | 1.4:+36504233 | MS.gene068189:CDS |
| TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 1.4:+36503339 | MS.gene068189:CDS |
| AGCTACAGAGTGTTAGTTCT+AGG | 0.351941 | 1.4:+36504847 | MS.gene068189:CDS |
| AAAATCCCTTCCTCAGTTGC+TGG | 0.361141 | 1.4:+36504882 | MS.gene068189:CDS |
| CCAGTTGATCCATCATTTCC+TGG | 0.368573 | 1.4:+36503799 | MS.gene068189:CDS |
| ATTTGGTACGGTCGACAAAA+TGG | 0.371676 | 1.4:+36503298 | MS.gene068189:CDS |
| CTCAGCATATTGAAGTCTTC+AGG | 0.382631 | 1.4:-36504429 | None:intergenic |
| ATGAGGATGCATTGTGCATT+TGG | 0.383955 | 1.4:-36504986 | None:intergenic |
| TGGGCACAGCAAAATGTTCT+AGG | 0.387831 | 1.4:+36504351 | MS.gene068189:CDS |
| TTCTCTCCGGGATGCACATA+TGG | 0.394353 | 1.4:-36503919 | None:intergenic |
| ACTTGGGCCCATGATATATC+AGG | 0.395579 | 1.4:-36505038 | None:intergenic |
| CCCGTTCACAATCTCATGAT+TGG | 0.398242 | 1.4:+36503887 | MS.gene068189:CDS |
| CTGCCTTCGTTAACTGGATC+TGG | 0.398343 | 1.4:+36504162 | MS.gene068189:CDS |
| TGAGGGCTCAGTGGGGAGAT+TGG | 0.398648 | 1.4:-36504786 | None:intergenic |
| TCATTCGAACATAAAATCAT+TGG | 0.400189 | 1.4:+36505005 | MS.gene068189:CDS |
| ACGGACCCATGGTCTTATTT+GGG | 0.401510 | 1.4:+36504912 | MS.gene068189:CDS |
| AGGCTCGGAGGAGAGATCTT+AGG | 0.406670 | 1.4:+36503941 | MS.gene068189:CDS |
| CCAGGAAATGATGGATCAAC+TGG | 0.407420 | 1.4:-36503799 | None:intergenic |
| TCTCATTCTCAAGTGCTGCT+TGG | 0.415243 | 1.4:+36504331 | MS.gene068189:CDS |
| AGTCGTGTTCGATACTGATC+TGG | 0.416868 | 1.4:-36504069 | None:intergenic |
| TGTATGCAAACGATGAATTT+CGG | 0.427602 | 1.4:+36503836 | MS.gene068189:CDS |
| CTCCTCCGAGCCTTCTCTCC+GGG | 0.428287 | 1.4:-36503931 | None:intergenic |
| AAGAGGTCTTCAAGATTTGA+TGG | 0.444188 | 1.4:-36504540 | None:intergenic |
| AACTGGATACTGTTTATTCT+CGG | 0.446949 | 1.4:-36503782 | None:intergenic |
| GGAACAACAATGAGATCAAC+AGG | 0.452808 | 1.4:-36503565 | None:intergenic |
| AACTTCTCTGTAATCGTCTC+AGG | 0.453134 | 1.4:-36505080 | None:intergenic |
| TCTCCTCCGAGCCTTCTCTC+CGG | 0.464820 | 1.4:-36503932 | None:intergenic |
| TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 1.4:+36503375 | MS.gene068189:CDS |
| AAGCCCCTTTCCTGAATTCA+GGG | 0.466005 | 1.4:-36503990 | None:intergenic |
| GCGAAATTCACATCGACCTC+CGG | 0.466224 | 1.4:-36503412 | None:intergenic |
| GAGGAAATGCAGACATTTGA+GGG | 0.466237 | 1.4:-36504803 | None:intergenic |
| CATTCGAACATAAAATCATT+GGG | 0.466563 | 1.4:+36505006 | MS.gene068189:CDS |
| AGGAAAGGGGCTTGCAGGCA+TGG | 0.466664 | 1.4:+36504000 | MS.gene068189:CDS |
| GACCAATCAGATATCTCATT+AGG | 0.468837 | 1.4:-36504939 | None:intergenic |
| ACAAAATTTCCGCAGAAAAG+AGG | 0.471696 | 1.4:-36504557 | None:intergenic |
| AACATCAATACTACCATAAG+TGG | 0.474991 | 1.4:-36503368 | None:intergenic |
| AACCCGGTCCTAGTTCTTGT+CGG | 0.478599 | 1.4:+36504502 | MS.gene068189:CDS |
| CTTCACTGTGCTGTTTCTGG+TGG | 0.478626 | 1.4:+36503460 | MS.gene068189:CDS |
| GAAGGTTATACTCTCGTATC+CGG | 0.481900 | 1.4:+36503393 | MS.gene068189:CDS |
| GAGATTGGTTCAAGCCTCCT+AGG | 0.483019 | 1.4:-36504771 | None:intergenic |
| AAGAAGAGCCTGATATATCA+TGG | 0.484635 | 1.4:+36505030 | MS.gene068189:CDS |
| AGTGTTAGTTCTAGGGAACT+TGG | 0.487388 | 1.4:+36504855 | MS.gene068189:CDS |
| TTCACTGTGCTGTTTCTGGT+GGG | 0.489201 | 1.4:+36503461 | MS.gene068189:CDS |
| ACCTCTGATAATATATCTGT+TGG | 0.492831 | 1.4:+36503640 | MS.gene068189:CDS |
| GAAAGCATATTAGTATTTGA+AGG | 0.495872 | 1.4:-36504681 | None:intergenic |
| CTCATGGAATATTCGAGTGC+TGG | 0.497753 | 1.4:+36504040 | MS.gene068189:CDS |
| TGAGGAAATGCAGACATTTG+AGG | 0.498286 | 1.4:-36504804 | None:intergenic |
| CTTGCCCTGAATTCAGGAAA+GGG | 0.500592 | 1.4:+36503986 | MS.gene068189:CDS |
| GGTGATCCAGCAACTGAGGA+AGG | 0.503780 | 1.4:-36504888 | None:intergenic |
| AACAGCTCAAGTCATTCATA+AGG | 0.503787 | 1.4:-36504473 | None:intergenic |
| GAAGCAAGTACCAGTAAACT+TGG | 0.508787 | 1.4:-36503205 | None:intergenic |
| CAGACATTTGAGGGCTCAGT+GGG | 0.513831 | 1.4:-36504794 | None:intergenic |
| GTCACCACCTTCTCCTGTGG+TGG | 0.515604 | 1.4:+36503747 | MS.gene068189:CDS |
| GATGGAAGTAAGAGACTGAC+GGG | 0.516673 | 1.4:-36504266 | None:intergenic |
| GAACACGACTCTGTAAAGAT+AGG | 0.519096 | 1.4:+36504082 | MS.gene068189:CDS |
| GTTAGTTGTGTCAATAGCAA+TGG | 0.528128 | 1.4:+36503535 | MS.gene068189:CDS |
| TTCAAGCTTTGCATATTAGG+AGG | 0.529947 | 1.4:-36503586 | None:intergenic |
| GGTTCTTCGATTAACGAGGC+GGG | 0.530305 | 1.4:+36503274 | MS.gene068189:CDS |
| CTCCTAATGAGATATCTGAT+TGG | 0.531536 | 1.4:+36504937 | MS.gene068189:CDS |
| TTCGAATCCACCACAGGAGA+AGG | 0.533536 | 1.4:-36503754 | None:intergenic |
| CGATGTGAATTTCGCTTGCG+TGG | 0.535512 | 1.4:+36503420 | MS.gene068189:CDS |
| CCAATCATGAGATTGTGAAC+GGG | 0.538143 | 1.4:-36503887 | None:intergenic |
| GGTGACACTGAAGGAGGGTA+TGG | 0.540320 | 1.4:-36503730 | None:intergenic |
| AATATGCTGAGCTCTTTGGA+TGG | 0.543742 | 1.4:+36504441 | MS.gene068189:CDS |
| CACCAGAAACAGCACAGTGA+AGG | 0.546868 | 1.4:-36503459 | None:intergenic |
| CTCAGTTGCTGGATCACCTA+CGG | 0.548161 | 1.4:+36504893 | MS.gene068189:CDS |
| CTCTGTAATCGTCTCAGGTG+GGG | 0.552298 | 1.4:-36505075 | None:intergenic |
| TGCATCCCGGAGAGAAGGCT+CGG | 0.553406 | 1.4:+36503926 | MS.gene068189:CDS |
| AGACCGACAAGAACTAGGAC+CGG | 0.553527 | 1.4:-36504505 | None:intergenic |
| TTCTCTGTAATCGTCTCAGG+TGG | 0.558944 | 1.4:-36505077 | None:intergenic |
| TCCAATCATGAGATTGTGAA+CGG | 0.559478 | 1.4:-36503888 | None:intergenic |
| ATATGCTGAGCTCTTTGGAT+GGG | 0.560183 | 1.4:+36504442 | MS.gene068189:CDS |
| AACGAGGCGGGGATTTGGTA+CGG | 0.561660 | 1.4:+36503286 | MS.gene068189:CDS |
| GCTTCTCACAATGACTCTGA+AGG | 0.563152 | 1.4:+36503223 | MS.gene068189:CDS |
| GCTACAGAGTGTTAGTTCTA+GGG | 0.566242 | 1.4:+36504848 | MS.gene068189:CDS |
| CAGGCTGAATGTTGCAAGCG+CGG | 0.567752 | 1.4:-36504410 | None:intergenic |
| GTGAGAATTCTTATATCCGC+GGG | 0.571110 | 1.4:+36503505 | MS.gene068189:CDS |
| GTAGCAGCCGATTTATGTGA+AGG | 0.573361 | 1.4:-36504624 | None:intergenic |
| GCCTTAGACCGACAAGAACT+AGG | 0.575103 | 1.4:-36504510 | None:intergenic |
| CTGGATCACCTACGGACCCA+TGG | 0.575262 | 1.4:+36504901 | MS.gene068189:CDS |
| GTAAATTTCGAATCCACCAC+AGG | 0.575410 | 1.4:-36503760 | None:intergenic |
| ACCAGAAACAGCACAGTGAA+GGG | 0.577093 | 1.4:-36503458 | None:intergenic |
| TAAGTGGCAGCAACCATCAA+AGG | 0.581005 | 1.4:-36503352 | None:intergenic |
| ATGAGATGCCATTTCCAGAA+GGG | 0.584083 | 1.4:-36504314 | None:intergenic |
| GTCGTGTTCGATACTGATCT+GGG | 0.586400 | 1.4:-36504068 | None:intergenic |
| ATATGTGCATCCCGGAGAGA+AGG | 0.587617 | 1.4:+36503921 | MS.gene068189:CDS |
| GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 1.4:+36504024 | MS.gene068189:CDS |
| GATGCAGATGAACGTGGTGA+AGG | 0.588152 | 1.4:-36504189 | None:intergenic |
| GTGACATGCTACCGCATGAA+GGG | 0.588287 | 1.4:-36504749 | None:intergenic |
| TAGCAGCCGATTTATGTGAA+GGG | 0.588534 | 1.4:-36504623 | None:intergenic |
| CCTTGCCCTGAATTCAGGAA+AGG | 0.589700 | 1.4:+36503985 | MS.gene068189:CDS |
| CCTTTCCTGAATTCAGGGCA+AGG | 0.594200 | 1.4:-36503985 | None:intergenic |
| CACACGATGAAAAGGAATTG+AGG | 0.597745 | 1.4:+36504136 | MS.gene068189:CDS |
| TTGCCCTGAATTCAGGAAAG+GGG | 0.599832 | 1.4:+36503987 | MS.gene068189:CDS |
| AGTGTCACCACCTTCTCCTG+TGG | 0.600051 | 1.4:+36503744 | MS.gene068189:CDS |
| GACCGACAAGAACTAGGACC+GGG | 0.601622 | 1.4:-36504504 | None:intergenic |
| TTGAGCTGTTTCTCACAACC+CGG | 0.602356 | 1.4:+36504486 | MS.gene068189:CDS |
| AGCAGCCGATTTATGTGAAG+GGG | 0.603058 | 1.4:-36504622 | None:intergenic |
| ACAACTAACATTTGCACCCG+CGG | 0.603059 | 1.4:-36503521 | None:intergenic |
| TAGGTATTCTGACCCAGCAA+TGG | 0.603203 | 1.4:+36504587 | MS.gene068189:CDS |
| CGGTCGACAAAATGGCTCTA+CGG | 0.603364 | 1.4:+36503306 | MS.gene068189:CDS |
| TGCTGCTGTTTCTCGCAATG+AGG | 0.606005 | 1.4:-36504822 | None:intergenic |
| GGAGATCCCAAATAAGACCA+TGG | 0.607064 | 1.4:-36504918 | None:intergenic |
| AGAAGAGCCTGATATATCAT+GGG | 0.608582 | 1.4:+36505031 | MS.gene068189:CDS |
| TCATTTGGTGTCCCTTCATG+CGG | 0.610299 | 1.4:+36504738 | MS.gene068189:CDS |
| TCTCTGTAATCGTCTCAGGT+GGG | 0.611762 | 1.4:-36505076 | None:intergenic |
| GATCCAGTTAACGAAGGCAG+TGG | 0.612013 | 1.4:-36504159 | None:intergenic |
| GAGTGTCCATATGTGCATCC+CGG | 0.612767 | 1.4:+36503913 | MS.gene068189:CDS |
| GAGATCCCAAATAAGACCAT+GGG | 0.613346 | 1.4:-36504917 | None:intergenic |
| GGATGGAAGTAAGAGACTGA+CGG | 0.616567 | 1.4:-36504267 | None:intergenic |
| TGAGATGCCATTTCCAGAAG+GGG | 0.617123 | 1.4:-36504313 | None:intergenic |
| TAATGAGATATCTGATTGGT+CGG | 0.621895 | 1.4:+36504941 | MS.gene068189:CDS |
| GTTCTTCGATTAACGAGGCG+GGG | 0.622041 | 1.4:+36503275 | MS.gene068189:CDS |
| AAATAAGACCATGGGTCCGT+AGG | 0.624229 | 1.4:-36504909 | None:intergenic |
| CGTAGGTGATCCAGCAACTG+AGG | 0.625395 | 1.4:-36504892 | None:intergenic |
| ACCAACAGATATATTATCAG+AGG | 0.629394 | 1.4:-36503641 | None:intergenic |
| GGTGACATGCTACCGCATGA+AGG | 0.631551 | 1.4:-36504750 | None:intergenic |
| GAAGGTGGTGACACTGAAGG+AGG | 0.631733 | 1.4:-36503736 | None:intergenic |
| GGAGAAGGTGGTGACACTGA+AGG | 0.632383 | 1.4:-36503739 | None:intergenic |
| AATGAGATGCCATTTCCAGA+AGG | 0.634273 | 1.4:-36504315 | None:intergenic |
| GTGATCCAGCAACTGAGGAA+GGG | 0.637371 | 1.4:-36504887 | None:intergenic |
| GCAGACATTTGAGGGCTCAG+TGG | 0.644297 | 1.4:-36504795 | None:intergenic |
| TGTGAGAATTCTTATATCCG+CGG | 0.649692 | 1.4:+36503504 | MS.gene068189:CDS |
| GAATCCACCACAGGAGAAGG+TGG | 0.649733 | 1.4:-36503751 | None:intergenic |
| CATGCGGTAGCATGTCACCT+AGG | 0.650388 | 1.4:+36504754 | MS.gene068189:CDS |
| GCGGTAGCATGTCACCTAGG+AGG | 0.656022 | 1.4:+36504757 | MS.gene068189:CDS |
| AGGTTCTTCGATTAACGAGG+CGG | 0.657658 | 1.4:+36503273 | MS.gene068189:CDS |
| ATTGTGAACGGGAACAACGA+AGG | 0.665165 | 1.4:-36503876 | None:intergenic |
| ATTGCTGGGTCAGAATACCT+AGG | 0.669043 | 1.4:-36504585 | None:intergenic |
| ATCCCGGAGAGAAGGCTCGG+AGG | 0.669076 | 1.4:+36503929 | MS.gene068189:CDS |
| AGGAGGTTCTTCGATTAACG+AGG | 0.672827 | 1.4:+36503270 | MS.gene068189:CDS |
| AAGGTGGTGACACTGAAGGA+GGG | 0.677347 | 1.4:-36503735 | None:intergenic |
| GGTTATACTCTCGTATCCGG+AGG | 0.687605 | 1.4:+36503396 | MS.gene068189:CDS |
| GAGATGCCATTTCCAGAAGG+GGG | 0.701139 | 1.4:-36504312 | None:intergenic |
| ACGCCAGATCCAGTTAACGA+AGG | 0.708633 | 1.4:-36504165 | None:intergenic |
| AAAGCAGATGCAGATGAACG+TGG | 0.708647 | 1.4:-36504195 | None:intergenic |
| ATGGAAGTAAGAGACTGACG+GGG | 0.742388 | 1.4:-36504265 | None:intergenic |
| AGACATTTGAGGGCTCAGTG+GGG | 0.787595 | 1.4:-36504793 | None:intergenic |
| TGGAAGTAAGAGACTGACGG+GGG | 0.798724 | 1.4:-36504264 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CATTCGAACATAAAATCATT+GGG | + | chr1.4:36505006-36505025 | MS.gene068189:CDS | 25.0% |
| ! | TCATTCGAACATAAAATCAT+TGG | + | chr1.4:36505005-36505024 | MS.gene068189:CDS | 25.0% |
| !! | AATGATTTTATGTTCGAATG+AGG | - | chr1.4:36505006-36505025 | None:intergenic | 25.0% |
| !! | AATTCTTGAGAAACTTCTTT+TGG | + | chr1.4:36503612-36503631 | MS.gene068189:CDS | 25.0% |
| !! | GAAAGCATATTAGTATTTGA+AGG | - | chr1.4:36504684-36504703 | None:intergenic | 25.0% |
| !!! | TTTTTTATACCAGGAAATGA+TGG | - | chr1.4:36503811-36503830 | None:intergenic | 25.0% |
| AACATCAATACTACCATAAG+TGG | - | chr1.4:36503371-36503390 | None:intergenic | 30.0% | |
| AACTGGATACTGTTTATTCT+CGG | - | chr1.4:36503785-36503804 | None:intergenic | 30.0% | |
| ACCAACAGATATATTATCAG+AGG | - | chr1.4:36503644-36503663 | None:intergenic | 30.0% | |
| ACCTCTGATAATATATCTGT+TGG | + | chr1.4:36503640-36503659 | MS.gene068189:CDS | 30.0% | |
| ACTTTCAAGCTTTGCATATT+AGG | - | chr1.4:36503592-36503611 | None:intergenic | 30.0% | |
| TAATGAGATATCTGATTGGT+CGG | + | chr1.4:36504941-36504960 | MS.gene068189:CDS | 30.0% | |
| TAGGCCTAGTTGTAATAAAA+AGG | + | chr1.4:36504101-36504120 | MS.gene068189:CDS | 30.0% | |
| TGTATGCAAACGATGAATTT+CGG | + | chr1.4:36503836-36503855 | MS.gene068189:CDS | 30.0% | |
| ! | AAGCTTCTTCTAGAAAAAGA+AGG | + | chr1.4:36503250-36503269 | MS.gene068189:CDS | 30.0% |
| ! | AATTTTCAATCTAGTCGGTT+GGG | + | chr1.4:36504378-36504397 | MS.gene068189:CDS | 30.0% |
| ! | ATTTCGGATGTTTTCTTTCA+AGG | + | chr1.4:36503852-36503871 | MS.gene068189:CDS | 30.0% |
| ! | CACACCTTTTTATTACAACT+AGG | - | chr1.4:36504108-36504127 | None:intergenic | 30.0% |
| ! | GAAGCAATTTTCAATCTAGT+CGG | + | chr1.4:36504373-36504392 | MS.gene068189:CDS | 30.0% |
| ! | TGCTTTTAATGAGATGGAAT+TGG | + | chr1.4:36504212-36504231 | MS.gene068189:CDS | 30.0% |
| ! | TTTTTCCCCTTCACATAAAT+CGG | + | chr1.4:36504617-36504636 | MS.gene068189:CDS | 30.0% |
| !! | TGGTAGTATTGATGTTATGA+AGG | + | chr1.4:36503375-36503394 | MS.gene068189:CDS | 30.0% |
| !!! | TACATGCTGTTTTTTATACC+AGG | - | chr1.4:36503820-36503839 | None:intergenic | 30.0% |
| AAAAAACAGAAGCCATTGCT+GGG | - | chr1.4:36504602-36504621 | None:intergenic | 35.0% | |
| AACAGCTCAAGTCATTCATA+AGG | - | chr1.4:36504476-36504495 | None:intergenic | 35.0% | |
| AAGAAGAGCCTGATATATCA+TGG | + | chr1.4:36505030-36505049 | MS.gene068189:CDS | 35.0% | |
| AAGAGGTCTTCAAGATTTGA+TGG | - | chr1.4:36504543-36504562 | None:intergenic | 35.0% | |
| ACAAAATTTCCGCAGAAAAG+AGG | - | chr1.4:36504560-36504579 | None:intergenic | 35.0% | |
| AGAAGAGCCTGATATATCAT+GGG | + | chr1.4:36505031-36505050 | MS.gene068189:CDS | 35.0% | |
| ATAGGCTGGGAAAAATTAGA+TGG | - | chr1.4:36504291-36504310 | None:intergenic | 35.0% | |
| CTCCTAATGAGATATCTGAT+TGG | + | chr1.4:36504937-36504956 | MS.gene068189:CDS | 35.0% | |
| GACCAATCAGATATCTCATT+AGG | - | chr1.4:36504942-36504961 | None:intergenic | 35.0% | |
| GATAAGTGTGAATATGCTCA+TGG | + | chr1.4:36504024-36504043 | MS.gene068189:CDS | 35.0% | |
| GTTAGTTGTGTCAATAGCAA+TGG | + | chr1.4:36503535-36503554 | MS.gene068189:CDS | 35.0% | |
| TCCAATCATGAGATTGTGAA+CGG | - | chr1.4:36503891-36503910 | None:intergenic | 35.0% | |
| TGTGAGAATTCTTATATCCG+CGG | + | chr1.4:36503504-36503523 | MS.gene068189:CDS | 35.0% | |
| TTCAAGCTTTGCATATTAGG+AGG | - | chr1.4:36503589-36503608 | None:intergenic | 35.0% | |
| ! | AGACTCTTTTCCAAGTTTAC+TGG | + | chr1.4:36503195-36503214 | MS.gene068189:CDS | 35.0% |
| ! | ATATCTGATTGGTCGGTAAA+TGG | + | chr1.4:36504948-36504967 | MS.gene068189:CDS | 35.0% |
| ! | CAATTTTCAATCTAGTCGGT+TGG | + | chr1.4:36504377-36504396 | MS.gene068189:CDS | 35.0% |
| ! | CGTCTTTTACAAGCTTCATT+TGG | + | chr1.4:36504723-36504742 | MS.gene068189:CDS | 35.0% |
| ! | CTTCTTCTAGAAAAAGAAGG+AGG | + | chr1.4:36503253-36503272 | MS.gene068189:CDS | 35.0% |
| ! | GGAATTCTTTTGTAGGACTT+GGG | - | chr1.4:36505057-36505076 | None:intergenic | 35.0% |
| !! | AGTTCTGGTTTGCTTGAAAA+TGG | + | chr1.4:36503697-36503716 | MS.gene068189:CDS | 35.0% |
| !! | TCTGTTGATTCTTCTAGTTC+TGG | + | chr1.4:36503682-36503701 | MS.gene068189:CDS | 35.0% |
| !! | TGCATCTGCTTTTAATGAGA+TGG | + | chr1.4:36504206-36504225 | MS.gene068189:CDS | 35.0% |
| !!! | TTTTTTCGCACACGATGAAA+AGG | + | chr1.4:36504128-36504147 | MS.gene068189:CDS | 35.0% |
| AACTTCTCTGTAATCGTCTC+AGG | - | chr1.4:36505083-36505102 | None:intergenic | 40.0% | |
| AATATGCTGAGCTCTTTGGA+TGG | + | chr1.4:36504441-36504460 | MS.gene068189:CDS | 40.0% | |
| ACAGAGAAGTTTGCATCTTC+TGG | + | chr1.4:36505092-36505111 | MS.gene068189:CDS | 40.0% | |
| AGACGATGCTCAACATTCTT+TGG | - | chr1.4:36504708-36504727 | None:intergenic | 40.0% | |
| ATATGCTGAGCTCTTTGGAT+GGG | + | chr1.4:36504442-36504461 | MS.gene068189:CDS | 40.0% | |
| ATGAGGATGCATTGTGCATT+TGG | - | chr1.4:36504989-36505008 | None:intergenic | 40.0% | |
| ATTTGGTACGGTCGACAAAA+TGG | + | chr1.4:36503298-36503317 | MS.gene068189:CDS | 40.0% | |
| CACACGATGAAAAGGAATTG+AGG | + | chr1.4:36504136-36504155 | MS.gene068189:CDS | 40.0% | |
| CCAATCATGAGATTGTGAAC+GGG | - | chr1.4:36503890-36503909 | None:intergenic | 40.0% | |
| CTCAGCATATTGAAGTCTTC+AGG | - | chr1.4:36504432-36504451 | None:intergenic | 40.0% | |
| CTTCAATATGCTGAGCTCTT+TGG | + | chr1.4:36504437-36504456 | MS.gene068189:CDS | 40.0% | |
| GAAAAAACAGAAGCCATTGC+TGG | - | chr1.4:36504603-36504622 | None:intergenic | 40.0% | |
| GAACACGACTCTGTAAAGAT+AGG | + | chr1.4:36504082-36504101 | MS.gene068189:CDS | 40.0% | |
| GAAGCAAGTACCAGTAAACT+TGG | - | chr1.4:36503208-36503227 | None:intergenic | 40.0% | |
| GAAGGTTATACTCTCGTATC+CGG | + | chr1.4:36503393-36503412 | MS.gene068189:CDS | 40.0% | |
| GAGATCCCAAATAAGACCAT+GGG | - | chr1.4:36504920-36504939 | None:intergenic | 40.0% | |
| GAGGAAATGCAGACATTTGA+GGG | - | chr1.4:36504806-36504825 | None:intergenic | 40.0% | |
| GCTGGGAAAAATTAGATGGA+TGG | - | chr1.4:36504287-36504306 | None:intergenic | 40.0% | |
| GGAACAACAATGAGATCAAC+AGG | - | chr1.4:36503568-36503587 | None:intergenic | 40.0% | |
| GTAAATTTCGAATCCACCAC+AGG | - | chr1.4:36503763-36503782 | None:intergenic | 40.0% | |
| GTGAGAATTCTTATATCCGC+GGG | + | chr1.4:36503505-36503524 | MS.gene068189:CDS | 40.0% | |
| TGAGCACAAAACTCCTTTGA+TGG | + | chr1.4:36503339-36503358 | MS.gene068189:CDS | 40.0% | |
| TGAGGAAATGCAGACATTTG+AGG | - | chr1.4:36504807-36504826 | None:intergenic | 40.0% | |
| ! | AATGAGATGCCATTTCCAGA+AGG | - | chr1.4:36504318-36504337 | None:intergenic | 40.0% |
| ! | AGCTACAGAGTGTTAGTTCT+AGG | + | chr1.4:36504847-36504866 | MS.gene068189:CDS | 40.0% |
| ! | ATGAGATGCCATTTCCAGAA+GGG | - | chr1.4:36504317-36504336 | None:intergenic | 40.0% |
| ! | CGGAAATTTTGTCATCTCCT+AGG | + | chr1.4:36504568-36504587 | MS.gene068189:CDS | 40.0% |
| ! | GCTGCAATGAATCTTTTGGT+CGG | + | chr1.4:36504237-36504256 | MS.gene068189:CDS | 40.0% |
| ! | GGGAATTCTTTTGTAGGACT+TGG | - | chr1.4:36505058-36505077 | None:intergenic | 40.0% |
| ! | TAGCAGCCGATTTATGTGAA+GGG | - | chr1.4:36504626-36504645 | None:intergenic | 40.0% |
| ! | TCTTGAAGACCTCTTTTCTG+CGG | + | chr1.4:36504548-36504567 | MS.gene068189:CDS | 40.0% |
| !! | AGTGTTAGTTCTAGGGAACT+TGG | + | chr1.4:36504855-36504874 | MS.gene068189:CDS | 40.0% |
| !! | GCTACAGAGTGTTAGTTCTA+GGG | + | chr1.4:36504848-36504867 | MS.gene068189:CDS | 40.0% |
| AAAATCCCTTCCTCAGTTGC+TGG | + | chr1.4:36504882-36504901 | MS.gene068189:CDS | 45.0% | |
| AAAGCAGATGCAGATGAACG+TGG | - | chr1.4:36504198-36504217 | None:intergenic | 45.0% | |
| AAATAAGACCATGGGTCCGT+AGG | - | chr1.4:36504912-36504931 | None:intergenic | 45.0% | |
| AAGCCCCTTTCCTGAATTCA+GGG | - | chr1.4:36503993-36504012 | None:intergenic | 45.0% | |
| ACAACTAACATTTGCACCCG+CGG | - | chr1.4:36503524-36503543 | None:intergenic | 45.0% | |
| ACCAGAAACAGCACAGTGAA+GGG | - | chr1.4:36503461-36503480 | None:intergenic | 45.0% | |
| ACTTGGGCCCATGATATATC+AGG | - | chr1.4:36505041-36505060 | None:intergenic | 45.0% | |
| AGGAGGTTCTTCGATTAACG+AGG | + | chr1.4:36503270-36503289 | MS.gene068189:CDS | 45.0% | |
| AGGTTCTTCGATTAACGAGG+CGG | + | chr1.4:36503273-36503292 | MS.gene068189:CDS | 45.0% | |
| AGTCGTGTTCGATACTGATC+TGG | - | chr1.4:36504072-36504091 | None:intergenic | 45.0% | |
| ATGGAAGTAAGAGACTGACG+GGG | - | chr1.4:36504268-36504287 | None:intergenic | 45.0% | |
| ATTGCTGGGTCAGAATACCT+AGG | - | chr1.4:36504588-36504607 | None:intergenic | 45.0% | |
| ATTGTGAACGGGAACAACGA+AGG | - | chr1.4:36503879-36503898 | None:intergenic | 45.0% | |
| CCAGTTGATCCATCATTTCC+TGG | + | chr1.4:36503799-36503818 | MS.gene068189:CDS | 45.0% | |
| CCCGTTCACAATCTCATGAT+TGG | + | chr1.4:36503887-36503906 | MS.gene068189:CDS | 45.0% | |
| CTCATGGAATATTCGAGTGC+TGG | + | chr1.4:36504040-36504059 | MS.gene068189:CDS | 45.0% | |
| CTTGCCCTGAATTCAGGAAA+GGG | + | chr1.4:36503986-36504005 | MS.gene068189:CDS | 45.0% | |
| GATGGAAGTAAGAGACTGAC+GGG | - | chr1.4:36504269-36504288 | None:intergenic | 45.0% | |
| GCTTCTCACAATGACTCTGA+AGG | + | chr1.4:36503223-36503242 | MS.gene068189:CDS | 45.0% | |
| GGAGATCCCAAATAAGACCA+TGG | - | chr1.4:36504921-36504940 | None:intergenic | 45.0% | |
| GGATGGAAGTAAGAGACTGA+CGG | - | chr1.4:36504270-36504289 | None:intergenic | 45.0% | |
| GTCGTGTTCGATACTGATCT+GGG | - | chr1.4:36504071-36504090 | None:intergenic | 45.0% | |
| TAAGTGGCAGCAACCATCAA+AGG | - | chr1.4:36503355-36503374 | None:intergenic | 45.0% | |
| TAGGTATTCTGACCCAGCAA+TGG | + | chr1.4:36504587-36504606 | MS.gene068189:CDS | 45.0% | |
| TCTCTGTAATCGTCTCAGGT+GGG | - | chr1.4:36505079-36505098 | None:intergenic | 45.0% | |
| TGGGCACAGCAAAATGTTCT+AGG | + | chr1.4:36504351-36504370 | MS.gene068189:CDS | 45.0% | |
| TTCTCTGTAATCGTCTCAGG+TGG | - | chr1.4:36505080-36505099 | None:intergenic | 45.0% | |
| TTGCCCTGAATTCAGGAAAG+GGG | + | chr1.4:36503987-36504006 | MS.gene068189:CDS | 45.0% | |
| ! | AGCAGCCGATTTATGTGAAG+GGG | - | chr1.4:36504625-36504644 | None:intergenic | 45.0% |
| ! | CAGGTGGGGAATTCTTTTGT+AGG | - | chr1.4:36505064-36505083 | None:intergenic | 45.0% |
| ! | GGCTGCTGCAATGAATCTTT+TGG | + | chr1.4:36504233-36504252 | MS.gene068189:CDS | 45.0% |
| ! | GTAGCAGCCGATTTATGTGA+AGG | - | chr1.4:36504627-36504646 | None:intergenic | 45.0% |
| ! | TCCTAGTTCTTGTCGGTCTA+AGG | + | chr1.4:36504509-36504528 | MS.gene068189:CDS | 45.0% |
| ! | TCTCATTCTCAAGTGCTGCT+TGG | + | chr1.4:36504331-36504350 | MS.gene068189:CDS | 45.0% |
| ! | TGAGATGCCATTTCCAGAAG+GGG | - | chr1.4:36504316-36504335 | None:intergenic | 45.0% |
| ! | TTGATGGTTGCTGCCACTTA+TGG | + | chr1.4:36503355-36503374 | MS.gene068189:CDS | 45.0% |
| !! | ACGGACCCATGGTCTTATTT+GGG | + | chr1.4:36504912-36504931 | MS.gene068189:CDS | 45.0% |
| !! | CCAGGAAATGATGGATCAAC+TGG | - | chr1.4:36503802-36503821 | None:intergenic | 45.0% |
| !! | CTCATTCTCAAGTGCTGCTT+GGG | + | chr1.4:36504332-36504351 | MS.gene068189:CDS | 45.0% |
| !! | TACGGACCCATGGTCTTATT+TGG | + | chr1.4:36504911-36504930 | MS.gene068189:CDS | 45.0% |
| !! | TCATTTGGTGTCCCTTCATG+CGG | + | chr1.4:36504738-36504757 | MS.gene068189:CDS | 45.0% |
| !! | TTCACTGTGCTGTTTCTGGT+GGG | + | chr1.4:36503461-36503480 | MS.gene068189:CDS | 45.0% |
| !! | TTGAGCTGTTTCTCACAACC+CGG | + | chr1.4:36504486-36504505 | MS.gene068189:CDS | 45.0% |
| AAGGTGGTGACACTGAAGGA+GGG | - | chr1.4:36503738-36503757 | None:intergenic | 50.0% | |
| AATTCAGGAAAGGGGCTTGC+AGG | + | chr1.4:36503995-36504014 | MS.gene068189:CDS | 50.0% | |
| ACGCCAGATCCAGTTAACGA+AGG | - | chr1.4:36504168-36504187 | None:intergenic | 50.0% | |
| AGACATTTGAGGGCTCAGTG+GGG | - | chr1.4:36504796-36504815 | None:intergenic | 50.0% | |
| AGACCGACAAGAACTAGGAC+CGG | - | chr1.4:36504508-36504527 | None:intergenic | 50.0% | |
| ATATGTGCATCCCGGAGAGA+AGG | + | chr1.4:36503921-36503940 | MS.gene068189:CDS | 50.0% | |
| CAAGCCCCTTTCCTGAATTC+AGG | - | chr1.4:36503994-36504013 | None:intergenic | 50.0% | |
| CACCAGAAACAGCACAGTGA+AGG | - | chr1.4:36503462-36503481 | None:intergenic | 50.0% | |
| CAGACATTTGAGGGCTCAGT+GGG | - | chr1.4:36504797-36504816 | None:intergenic | 50.0% | |
| CCTTGCCCTGAATTCAGGAA+AGG | + | chr1.4:36503985-36504004 | MS.gene068189:CDS | 50.0% | |
| CCTTTCCTGAATTCAGGGCA+AGG | - | chr1.4:36503988-36504007 | None:intergenic | 50.0% | |
| CGATGTGAATTTCGCTTGCG+TGG | + | chr1.4:36503420-36503439 | MS.gene068189:CDS | 50.0% | |
| CTCAGTTGCTGGATCACCTA+CGG | + | chr1.4:36504893-36504912 | MS.gene068189:CDS | 50.0% | |
| CTCTGTAATCGTCTCAGGTG+GGG | - | chr1.4:36505078-36505097 | None:intergenic | 50.0% | |
| CTGCCTTCGTTAACTGGATC+TGG | + | chr1.4:36504162-36504181 | MS.gene068189:CDS | 50.0% | |
| GAGTGTCCATATGTGCATCC+CGG | + | chr1.4:36503913-36503932 | MS.gene068189:CDS | 50.0% | |
| GATCCAGTTAACGAAGGCAG+TGG | - | chr1.4:36504162-36504181 | None:intergenic | 50.0% | |
| GATGCAGATGAACGTGGTGA+AGG | - | chr1.4:36504192-36504211 | None:intergenic | 50.0% | |
| GCCTTAGACCGACAAGAACT+AGG | - | chr1.4:36504513-36504532 | None:intergenic | 50.0% | |
| GCGAAATTCACATCGACCTC+CGG | - | chr1.4:36503415-36503434 | None:intergenic | 50.0% | |
| GGTTATACTCTCGTATCCGG+AGG | + | chr1.4:36503396-36503415 | MS.gene068189:CDS | 50.0% | |
| GGTTCTTCGATTAACGAGGC+GGG | + | chr1.4:36503274-36503293 | MS.gene068189:CDS | 50.0% | |
| GTGACATGCTACCGCATGAA+GGG | - | chr1.4:36504752-36504771 | None:intergenic | 50.0% | |
| GTGATCCAGCAACTGAGGAA+GGG | - | chr1.4:36504890-36504909 | None:intergenic | 50.0% | |
| GTTCTTCGATTAACGAGGCG+GGG | + | chr1.4:36503275-36503294 | MS.gene068189:CDS | 50.0% | |
| TGGAAGTAAGAGACTGACGG+GGG | - | chr1.4:36504267-36504286 | None:intergenic | 50.0% | |
| TTCGAATCCACCACAGGAGA+AGG | - | chr1.4:36503757-36503776 | None:intergenic | 50.0% | |
| TTCTCTCCGGGATGCACATA+TGG | - | chr1.4:36503922-36503941 | None:intergenic | 50.0% | |
| ! | AACCCGGTCCTAGTTCTTGT+CGG | + | chr1.4:36504502-36504521 | MS.gene068189:CDS | 50.0% |
| ! | CGGTCGACAAAATGGCTCTA+CGG | + | chr1.4:36503306-36503325 | MS.gene068189:CDS | 50.0% |
| ! | GAGATGCCATTTCCAGAAGG+GGG | - | chr1.4:36504315-36504334 | None:intergenic | 50.0% |
| ! | GAGATTGGTTCAAGCCTCCT+AGG | - | chr1.4:36504774-36504793 | None:intergenic | 50.0% |
| !! | CTTCACTGTGCTGTTTCTGG+TGG | + | chr1.4:36503460-36503479 | MS.gene068189:CDS | 50.0% |
| !! | TGCTGCTGTTTCTCGCAATG+AGG | - | chr1.4:36504825-36504844 | None:intergenic | 50.0% |
| AGGCCACTGCCTTCGTTAAC+TGG | + | chr1.4:36504156-36504175 | MS.gene068189:CDS | 55.0% | |
| AGGCTCGGAGGAGAGATCTT+AGG | + | chr1.4:36503941-36503960 | MS.gene068189:CDS | 55.0% | |
| AGTGTCACCACCTTCTCCTG+TGG | + | chr1.4:36503744-36503763 | MS.gene068189:CDS | 55.0% | |
| CAGGCTGAATGTTGCAAGCG+CGG | - | chr1.4:36504413-36504432 | None:intergenic | 55.0% | |
| CATGCGGTAGCATGTCACCT+AGG | + | chr1.4:36504754-36504773 | MS.gene068189:CDS | 55.0% | |
| CGATTAACGAGGCGGGGATT+TGG | + | chr1.4:36503281-36503300 | MS.gene068189:CDS | 55.0% | |
| CGTAGGTGATCCAGCAACTG+AGG | - | chr1.4:36504895-36504914 | None:intergenic | 55.0% | |
| GAAGGTGGTGACACTGAAGG+AGG | - | chr1.4:36503739-36503758 | None:intergenic | 55.0% | |
| GAATCCACCACAGGAGAAGG+TGG | - | chr1.4:36503754-36503773 | None:intergenic | 55.0% | |
| GACCGACAAGAACTAGGACC+GGG | - | chr1.4:36504507-36504526 | None:intergenic | 55.0% | |
| GCAGACATTTGAGGGCTCAG+TGG | - | chr1.4:36504798-36504817 | None:intergenic | 55.0% | |
| GCATGCCTTGCCCTGAATTC+AGG | + | chr1.4:36503980-36503999 | MS.gene068189:CDS | 55.0% | |
| GGAGAAGGTGGTGACACTGA+AGG | - | chr1.4:36503742-36503761 | None:intergenic | 55.0% | |
| GGTGACACTGAAGGAGGGTA+TGG | - | chr1.4:36503733-36503752 | None:intergenic | 55.0% | |
| GGTGACATGCTACCGCATGA+AGG | - | chr1.4:36504753-36504772 | None:intergenic | 55.0% | |
| GGTGATCCAGCAACTGAGGA+AGG | - | chr1.4:36504891-36504910 | None:intergenic | 55.0% | |
| ! | AACGAGGCGGGGATTTGGTA+CGG | + | chr1.4:36503286-36503305 | MS.gene068189:CDS | 55.0% |
| ! | CCATTTCCAGAAGGGGGCAT+AGG | - | chr1.4:36504309-36504328 | None:intergenic | 55.0% |
| ! | CCTATGCCCCCTTCTGGAAA+TGG | + | chr1.4:36504306-36504325 | MS.gene068189:CDS | 55.0% |
| !! | GCCCTTCACTGTGCTGTTTC+TGG | + | chr1.4:36503457-36503476 | MS.gene068189:CDS | 55.0% |
| AGGAAAGGGGCTTGCAGGCA+TGG | + | chr1.4:36504000-36504019 | MS.gene068189:CDS | 60.0% | |
| CTGGATCACCTACGGACCCA+TGG | + | chr1.4:36504901-36504920 | MS.gene068189:CDS | 60.0% | |
| GCGGTAGCATGTCACCTAGG+AGG | + | chr1.4:36504757-36504776 | MS.gene068189:CDS | 60.0% | |
| GTCACCACCTTCTCCTGTGG+TGG | + | chr1.4:36503747-36503766 | MS.gene068189:CDS | 60.0% | |
| TCTCCTCCGAGCCTTCTCTC+CGG | - | chr1.4:36503935-36503954 | None:intergenic | 60.0% | |
| TGAGGGCTCAGTGGGGAGAT+TGG | - | chr1.4:36504789-36504808 | None:intergenic | 60.0% | |
| TGCATCCCGGAGAGAAGGCT+CGG | + | chr1.4:36503926-36503945 | MS.gene068189:CDS | 60.0% | |
| ! | TCCAGAAGGGGGCATAGGCT+GGG | - | chr1.4:36504304-36504323 | None:intergenic | 60.0% |
| ! | TTCCAGAAGGGGGCATAGGC+TGG | - | chr1.4:36504305-36504324 | None:intergenic | 60.0% |
| ATCCCGGAGAGAAGGCTCGG+AGG | + | chr1.4:36503929-36503948 | MS.gene068189:CDS | 65.0% | |
| CTCCTCCGAGCCTTCTCTCC+GGG | - | chr1.4:36503934-36503953 | None:intergenic | 65.0% | |
| TCCCAGCCTATGCCCCCTTC+TGG | + | chr1.4:36504300-36504319 | MS.gene068189:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 36503169 | 36505142 | 36503169 | ID=MS.gene068189 |
| chr1.4 | mRNA | 36503169 | 36505142 | 36503169 | ID=MS.gene068189.t1;Parent=MS.gene068189 |
| chr1.4 | exon | 36503169 | 36505142 | 36503169 | ID=MS.gene068189.t1.exon1;Parent=MS.gene068189.t1 |
| chr1.4 | CDS | 36503169 | 36505142 | 36503169 | ID=cds.MS.gene068189.t1;Parent=MS.gene068189.t1 |
| Gene Sequence |
| Protein sequence |
