AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068379

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068379.t1 MTR_8g027295 97.770 269 4 1 1 267 1 269 0.0 540
MS.gene068379.t1 MTR_3g091820 46.441 295 125 12 1 267 17 306 2.63e-69 216
MS.gene068379.t1 MTR_1g077600 44.815 270 104 12 4 258 21 260 1.30e-51 170
MS.gene068379.t1 MTR_1g077600 44.815 270 104 12 4 258 21 260 1.44e-51 170
MS.gene068379.t1 MTR_2g093220 75.000 72 16 1 9 78 23 94 9.71e-34 124
MS.gene068379.t1 MTR_3g077750 52.000 125 45 4 10 130 45 158 1.16e-30 117
MS.gene068379.t1 MTR_8g479350 54.808 104 41 2 21 124 65 162 1.88e-30 116
MS.gene068379.t1 MTR_4g063780 72.059 68 19 0 11 78 62 129 4.14e-30 115
MS.gene068379.t1 MTR_8g068210 66.250 80 24 2 15 92 21 99 1.32e-29 114
MS.gene068379.t1 MTR_4g022370 43.796 137 70 2 11 140 69 205 1.62e-29 114
MS.gene068379.t1 MTR_4g461080 69.014 71 20 1 8 76 11 81 1.64e-29 112
MS.gene068379.t1 MTR_3g090430 76.562 64 13 1 17 78 42 105 2.55e-29 113
MS.gene068379.t1 MTR_4g088580 73.529 68 14 1 26 93 57 120 3.85e-29 114
MS.gene068379.t1 MTR_1g056810 87.037 54 7 0 25 78 13 66 7.10e-29 111
MS.gene068379.t1 MTR_8g079060 48.214 112 48 2 11 116 10 117 8.32e-29 109
MS.gene068379.t1 MTR_2g096740 66.216 74 25 0 24 97 62 135 1.11e-28 110
MS.gene068379.t1 MTR_2g096740 66.216 74 25 0 24 97 77 150 1.23e-28 110
MS.gene068379.t1 MTR_2g014060 77.966 59 12 1 17 75 19 76 6.37e-28 109
MS.gene068379.t1 MTR_5g031440 78.182 55 12 0 20 74 39 93 8.76e-28 109
MS.gene068379.t1 MTR_8g015840 72.131 61 17 0 21 81 17 77 1.95e-27 105
MS.gene068379.t1 MTR_7g024670 83.019 53 9 0 26 78 79 131 6.02e-27 107
MS.gene068379.t1 MTR_7g059400 79.245 53 11 0 26 78 78 130 7.50e-27 107
MS.gene068379.t1 MTR_2g013370 58.108 74 30 1 6 79 28 100 1.06e-26 105
MS.gene068379.t1 MTR_4g089095 74.138 58 14 1 22 79 48 104 1.94e-26 105
MS.gene068379.t1 MTR_4g089095 74.138 58 14 1 22 79 14 70 2.57e-26 103
MS.gene068379.t1 MTR_3g435480 69.492 59 18 0 19 77 131 189 6.62e-26 105
MS.gene068379.t1 MTR_4g082060 64.062 64 23 0 19 82 117 180 2.77e-25 104
MS.gene068379.t1 MTR_4g109980 77.358 53 12 0 22 74 38 90 4.57e-25 101
MS.gene068379.t1 MTR_7g010950 67.797 59 19 0 19 77 130 188 5.16e-25 103
MS.gene068379.t1 MTR_2g059540 81.633 49 9 0 24 72 31 79 6.80e-25 98.6
MS.gene068379.t1 MTR_6g027450 60.317 63 25 0 19 81 84 146 8.29e-25 101
MS.gene068379.t1 MTR_7g086780 61.905 63 24 0 19 81 94 156 8.32e-25 102
MS.gene068379.t1 MTR_2g014170 79.592 49 10 0 24 72 45 93 1.78e-24 100
MS.gene068379.t1 MTR_2g016030 63.636 66 22 1 12 77 37 100 1.92e-24 96.3
MS.gene068379.t1 MTR_8g044220 61.290 62 24 0 19 80 113 174 2.99e-24 101
MS.gene068379.t1 MTR_6g027460 53.947 76 35 0 19 94 91 166 4.24e-24 100
MS.gene068379.t1 MTR_6g012450 66.102 59 20 0 19 77 131 189 4.40e-24 101
MS.gene068379.t1 MTR_5g041420 62.712 59 22 0 19 77 133 191 3.05e-23 97.1
MS.gene068379.t1 MTR_5g041530 66.667 54 18 0 24 77 140 193 3.85e-21 92.0
MS.gene068379.t1 MTR_5g041380 56.250 64 28 0 14 77 117 180 1.26e-20 90.5
MS.gene068379.t1 MTR_5g041400 56.250 64 28 0 14 77 109 172 1.33e-20 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068379.t1 AT3G61850 51.246 281 86 19 16 267 54 312 3.12e-65 206
MS.gene068379.t1 AT3G61850 51.246 281 86 19 16 267 66 324 4.80e-65 206
MS.gene068379.t1 AT3G61850 48.889 270 81 16 16 267 54 284 6.50e-63 199
MS.gene068379.t1 AT3G61850 48.889 270 81 16 16 267 54 284 6.50e-63 199
MS.gene068379.t1 AT3G61850 48.889 270 81 16 16 267 66 296 1.21e-62 199
MS.gene068379.t1 AT2G46590 43.175 315 101 16 15 267 59 357 3.11e-53 176
MS.gene068379.t1 AT2G46590 43.175 315 101 16 15 267 71 369 3.72e-53 177
MS.gene068379.t1 AT4G24060 40.328 305 129 14 13 267 40 341 4.85e-45 155
MS.gene068379.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene068379.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene068379.t1 AT4G00940 62.727 110 39 1 18 125 62 171 6.22e-39 137
MS.gene068379.t1 AT1G64620 36.593 317 126 12 10 262 33 338 8.20e-38 136
MS.gene068379.t1 AT5G60200 48.780 123 57 2 10 130 41 159 6.87e-33 121
MS.gene068379.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.55e-31 119
MS.gene068379.t1 AT3G55370 73.529 68 18 0 11 78 108 175 1.78e-31 120
MS.gene068379.t1 AT3G55370 73.529 68 18 0 11 78 63 130 1.86e-31 119
MS.gene068379.t1 AT2G28510 55.357 112 46 2 22 130 46 156 2.19e-31 118
MS.gene068379.t1 AT3G45610 60.494 81 30 1 16 96 32 110 7.42e-30 112
MS.gene068379.t1 AT2G37590 75.410 61 15 0 18 78 83 143 8.70e-30 114
MS.gene068379.t1 AT1G51700 64.103 78 25 2 21 95 30 107 1.87e-29 110
MS.gene068379.t1 AT5G65590 64.935 77 23 1 18 94 35 107 1.97e-29 113
MS.gene068379.t1 AT3G52440 82.456 57 10 0 26 82 27 83 1.84e-28 109
MS.gene068379.t1 AT5G66940 74.138 58 15 0 21 78 29 86 2.11e-28 108
MS.gene068379.t1 AT3G52440 82.456 57 10 0 26 82 46 102 2.25e-28 109
MS.gene068379.t1 AT5G02460 67.647 68 22 0 11 78 82 149 3.30e-28 111
MS.gene068379.t1 AT3G50410 74.138 58 15 0 21 78 27 84 3.44e-28 108
MS.gene068379.t1 AT5G60850 58.333 84 30 1 22 105 49 127 1.08e-27 108
MS.gene068379.t1 AT3G21270 53.125 96 24 1 24 98 29 124 1.23e-27 105
MS.gene068379.t1 AT2G28810 68.182 66 20 1 11 75 63 128 1.59e-27 108
MS.gene068379.t1 AT2G28810 68.182 66 20 1 11 75 80 145 2.12e-27 108
MS.gene068379.t1 AT1G07640 78.182 55 12 0 24 78 21 75 2.21e-27 107
MS.gene068379.t1 AT1G07640 78.182 55 12 0 24 78 77 131 2.39e-27 108
MS.gene068379.t1 AT4G38000 64.474 76 24 2 10 83 25 99 2.51e-27 106
MS.gene068379.t1 AT1G07640 78.182 55 12 0 24 78 85 139 3.17e-27 108
MS.gene068379.t1 AT1G28310 75.000 56 14 0 24 79 27 82 3.59e-27 107
MS.gene068379.t1 AT1G21340 71.212 66 16 1 16 78 27 92 3.67e-27 106
MS.gene068379.t1 AT1G28310 75.000 56 14 0 24 79 51 106 5.58e-27 107
MS.gene068379.t1 AT1G69570 70.312 64 19 0 19 82 127 190 1.87e-26 107
MS.gene068379.t1 AT5G62940 85.714 49 7 0 26 74 75 123 4.89e-26 105
MS.gene068379.t1 AT4G21050 68.852 61 19 0 19 79 19 79 9.89e-26 101
MS.gene068379.t1 AT1G29160 61.765 68 26 0 10 77 48 115 1.06e-25 100
MS.gene068379.t1 AT2G34140 58.108 74 31 0 4 77 38 111 1.13e-25 99.8
MS.gene068379.t1 AT1G47655 76.923 52 12 0 22 73 27 78 3.41e-25 99.8
MS.gene068379.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene068379.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene068379.t1 AT5G39660 61.972 71 25 1 7 77 123 191 6.60e-25 103
MS.gene068379.t1 AT3G47500 66.102 59 20 0 19 77 105 163 3.69e-24 100
MS.gene068379.t1 AT5G62430 64.407 59 21 0 19 77 49 107 4.54e-24 98.6
MS.gene068379.t1 AT1G26790 66.102 59 20 0 19 77 106 164 7.46e-24 99.4
MS.gene068379.t1 AT4G21040 75.000 52 13 0 26 77 27 78 1.19e-23 96.3
MS.gene068379.t1 AT4G21080 71.154 52 15 0 26 77 27 78 1.39e-22 93.6
MS.gene068379.t1 AT4G21030 58.000 50 21 0 26 75 23 72 2.97e-13 67.0

Find 66 sgRNAs with CRISPR-Local

Find 72 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGCTAATAACAATAATTT+AGG 0.092469 8.3:+67088778 MS.gene068379:CDS
TTTACAATTGATGGAATTAA+TGG 0.156949 8.3:+67088868 MS.gene068379:CDS
CCTTGCCTTGGACATGAATT+AGG 0.219906 8.3:-67088292 None:intergenic
AGTCTTGGATTTACAATTGA+TGG 0.273556 8.3:+67088859 MS.gene068379:CDS
AAGGAAATTCAACTGGATAT+TGG 0.307009 8.3:+67089028 MS.gene068379:CDS
ATGCTAATAACAATAATTTA+GGG 0.313695 8.3:+67088779 MS.gene068379:CDS
TCAAATGCTATTTATCCATC+TGG 0.339522 8.3:+67088811 MS.gene068379:CDS
TTCTTCTCTAATCCTTGCCT+TGG 0.373577 8.3:-67088304 None:intergenic
AAATTATTGTTATTAGCATA+AGG 0.374908 8.3:-67088775 None:intergenic
GGATAAATAGCATTTGAGTT+TGG 0.376465 8.3:-67088805 None:intergenic
CATGTCTTGCAAAAGTATCT+TGG 0.386535 8.3:-67088415 None:intergenic
GCAAGACATGTAGAAGGTAT+TGG 0.389030 8.3:+67088428 MS.gene068379:CDS
ATGAAAGATGTGAAACTTGT+AGG 0.415991 8.3:-67088576 None:intergenic
CTTGTAGGGTTGGTGGATTT+AGG 0.422116 8.3:-67088561 None:intergenic
AGGGTTGGTGGATTTAGGTC+AGG 0.429516 8.3:-67088556 None:intergenic
GATCAACAAGGAAATTCAAC+TGG 0.430255 8.3:+67089021 MS.gene068379:CDS
GGACAATTTATTTGCTCTTG+TGG 0.430301 8.3:-67088334 None:intergenic
TTTCTTGAACCACCTCCAAC+AGG 0.434621 8.3:-67088478 None:intergenic
AATTATTGTTATTAGCATAA+GGG 0.435765 8.3:-67088774 None:intergenic
TTAACATTAACATCTCCAAA+TGG 0.436637 8.3:-67088952 None:intergenic
GAAAAGCTAGGTTAAGATCT+TGG 0.443847 8.3:-67088624 None:intergenic
CAAGAAGTTAAACCTAGTCT+TGG 0.453651 8.3:+67088844 MS.gene068379:CDS
CTTCAGCTCTTGACCTACTT+AGG 0.461666 8.3:+67088725 MS.gene068379:CDS
GTTCAAGAAGGTGGTGGTGG+TGG 0.468196 8.3:+67088916 MS.gene068379:CDS
TAACATTAACATCTCCAAAT+GGG 0.469418 8.3:-67088951 None:intergenic
CTAAGAAATGTTCCTGTTGG+AGG 0.487652 8.3:+67088466 MS.gene068379:CDS
GTTATGCATCTCAACATATG+AGG 0.495564 8.3:-67088686 None:intergenic
GAAAACTATCATCATAATCA+TGG 0.499028 8.3:+67088655 MS.gene068379:CDS
TGTGAAACTTGTAGGGTTGG+TGG 0.499794 8.3:-67088568 None:intergenic
TGGATATTGGAATGGAATGA+TGG 0.500493 8.3:+67089041 MS.gene068379:CDS
TCTCTAAGAAATGTTCCTGT+TGG 0.507663 8.3:+67088463 MS.gene068379:CDS
TTCTACAAGTGGTGTTGAAG+TGG 0.514078 8.3:+67088987 MS.gene068379:CDS
AGAAATGTTCCTGTTGGAGG+TGG 0.521904 8.3:+67088469 MS.gene068379:CDS
ACTAGGTTTAACTTCTTGCA+TGG 0.527857 8.3:-67088839 None:intergenic
TGTAGAAGGTATTGGACTGA+AGG 0.537478 8.3:+67088436 MS.gene068379:CDS
AATTCAACTGGATATTGGAA+TGG 0.543811 8.3:+67089033 MS.gene068379:CDS
TATAGGTATATACTCATGGA+AGG 0.550898 8.3:+67088262 None:intergenic
AATAAACAGCTTTCTACAAG+TGG 0.552575 8.3:+67088976 MS.gene068379:CDS
GAATGATGGGTGAAGGATCA+TGG 0.555879 8.3:+67089055 MS.gene068379:CDS
TTTCCATAGATGGAAAAGCT+AGG 0.562893 8.3:-67088636 None:intergenic
ATGCCATGCTTGACCTAAGT+AGG 0.567095 8.3:-67088738 None:intergenic
TCTTGCATGGTGAATCCAGA+TGG 0.582527 8.3:-67088826 None:intergenic
CAAGTTCAAGAAGGTGGTGG+TGG 0.585887 8.3:+67088913 MS.gene068379:CDS
AGATGTGAAACTTGTAGGGT+TGG 0.588666 8.3:-67088571 None:intergenic
TGATGAACTATTGTTAGGTG+TGG 0.591182 8.3:-67088527 None:intergenic
TGAAAGATGTGAAACTTGTA+GGG 0.592727 8.3:-67088575 None:intergenic
TGCATCTCAACATATGAGGA+TGG 0.597529 8.3:-67088682 None:intergenic
TCTCAAAACCCTAAAATACA+AGG 0.599552 8.3:+67088598 MS.gene068379:CDS
TCAATTGTAAATCCAAGACT+AGG 0.600734 8.3:-67088856 None:intergenic
TGGAATGGAATGATGGGTGA+AGG 0.602503 8.3:+67089048 MS.gene068379:CDS
GGATATTGGAATGGAATGAT+GGG 0.607936 8.3:+67089042 MS.gene068379:CDS
TTAGGTGTGGCTAATGATGA+AGG 0.609773 8.3:-67088514 None:intergenic
AAGAGCAAATAAATTGTCCA+AGG 0.610950 8.3:+67088338 MS.gene068379:CDS
GATCATGTTCAAGTTCAAGA+AGG 0.611680 8.3:+67088904 MS.gene068379:CDS
TAGCTCCTAATTCATGTCCA+AGG 0.613211 8.3:+67088287 MS.gene068379:CDS
CCTAATTCATGTCCAAGGCA+AGG 0.615681 8.3:+67088292 MS.gene068379:CDS
AGAAGGTATTGGACTGAAGG+AGG 0.618740 8.3:+67088439 MS.gene068379:CDS
GTTCAAGTTCAAGAAGGTGG+TGG 0.620240 8.3:+67088910 MS.gene068379:CDS
AAGGATTAGAGAAGAAAGCA+AGG 0.621824 8.3:+67088311 MS.gene068379:CDS
AGGTCAAGCATGGCATCTAG+AGG 0.626491 8.3:+67088745 MS.gene068379:CDS
CATGTTCAAGTTCAAGAAGG+TGG 0.629706 8.3:+67088907 MS.gene068379:CDS
TGACCTACTTAGGTCAAGCA+TGG 0.637135 8.3:+67088735 MS.gene068379:CDS
GTGTTGGTTGAATTGCACCT+TGG 0.648497 8.3:-67088355 None:intergenic
ATAGGTATATACTCATGGAA+GGG 0.653687 8.3:+67088263 None:intergenic
CAAAACCCTAAAATACAAGG+AGG 0.720797 8.3:+67088601 MS.gene068379:CDS
GAACACAATAAAGATCAACA+AGG 0.746748 8.3:+67089009 MS.gene068379:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGCTAATAACAATAATTTA+GGG + chr8.3:67088779-67088798 MS.gene068379:CDS 15.0%
!! TATGCTAATAACAATAATTT+AGG + chr8.3:67088778-67088797 MS.gene068379:CDS 15.0%
!!! AAATTATTGTTATTAGCATA+AGG - chr8.3:67088778-67088797 None:intergenic 15.0%
!!! AATTATTGTTATTAGCATAA+GGG - chr8.3:67088777-67088796 None:intergenic 15.0%
!! TTTACAATTGATGGAATTAA+TGG + chr8.3:67088868-67088887 MS.gene068379:CDS 20.0%
!!! ATTTTTGATGAACTATTGTT+AGG - chr8.3:67088535-67088554 None:intergenic 20.0%
!!! GTAATAACAAAATTTTGTGT+TGG - chr8.3:67088374-67088393 None:intergenic 20.0%
! GAAAACTATCATCATAATCA+TGG + chr8.3:67088655-67088674 MS.gene068379:CDS 25.0%
! TAACATTAACATCTCCAAAT+GGG - chr8.3:67088954-67088973 None:intergenic 25.0%
! TTAACATTAACATCTCCAAA+TGG - chr8.3:67088955-67088974 None:intergenic 25.0%
AAGAGCAAATAAATTGTCCA+AGG + chr8.3:67088338-67088357 MS.gene068379:CDS 30.0%
AAGGAAATTCAACTGGATAT+TGG + chr8.3:67089028-67089047 MS.gene068379:CDS 30.0%
AATAAACAGCTTTCTACAAG+TGG + chr8.3:67088976-67088995 MS.gene068379:CDS 30.0%
AATTCAACTGGATATTGGAA+TGG + chr8.3:67089033-67089052 MS.gene068379:CDS 30.0%
AGTCTTGGATTTACAATTGA+TGG + chr8.3:67088859-67088878 MS.gene068379:CDS 30.0%
ATGAAAGATGTGAAACTTGT+AGG - chr8.3:67088579-67088598 None:intergenic 30.0%
GAACACAATAAAGATCAACA+AGG + chr8.3:67089009-67089028 MS.gene068379:CDS 30.0%
TCAATTGTAAATCCAAGACT+AGG - chr8.3:67088859-67088878 None:intergenic 30.0%
TCTCAAAACCCTAAAATACA+AGG + chr8.3:67088598-67088617 MS.gene068379:CDS 30.0%
TGAAAGATGTGAAACTTGTA+GGG - chr8.3:67088578-67088597 None:intergenic 30.0%
! GGATAAATAGCATTTGAGTT+TGG - chr8.3:67088808-67088827 None:intergenic 30.0%
! TCAAATGCTATTTATCCATC+TGG + chr8.3:67088811-67088830 MS.gene068379:CDS 30.0%
! TGATGATAGTTTTCCATAGA+TGG - chr8.3:67088649-67088668 None:intergenic 30.0%
AAGGATTAGAGAAGAAAGCA+AGG + chr8.3:67088311-67088330 MS.gene068379:CDS 35.0%
CAAAACCCTAAAATACAAGG+AGG + chr8.3:67088601-67088620 MS.gene068379:CDS 35.0%
CAAGAAGTTAAACCTAGTCT+TGG + chr8.3:67088844-67088863 MS.gene068379:CDS 35.0%
GAAAAGCTAGGTTAAGATCT+TGG - chr8.3:67088627-67088646 None:intergenic 35.0%
GATCAACAAGGAAATTCAAC+TGG + chr8.3:67089021-67089040 MS.gene068379:CDS 35.0%
GGACAATTTATTTGCTCTTG+TGG - chr8.3:67088337-67088356 None:intergenic 35.0%
GGATATTGGAATGGAATGAT+GGG + chr8.3:67089042-67089061 MS.gene068379:CDS 35.0%
GTTATGCATCTCAACATATG+AGG - chr8.3:67088689-67088708 None:intergenic 35.0%
TGATGAACTATTGTTAGGTG+TGG - chr8.3:67088530-67088549 None:intergenic 35.0%
TGGATATTGGAATGGAATGA+TGG + chr8.3:67089041-67089060 MS.gene068379:CDS 35.0%
TTTCCATAGATGGAAAAGCT+AGG - chr8.3:67088639-67088658 None:intergenic 35.0%
! ACTAGGTTTAACTTCTTGCA+TGG - chr8.3:67088842-67088861 None:intergenic 35.0%
! ACTTTTGCAAGACATGTAGA+AGG + chr8.3:67088422-67088441 MS.gene068379:CDS 35.0%
! GATCATGTTCAAGTTCAAGA+AGG + chr8.3:67088904-67088923 MS.gene068379:CDS 35.0%
! TCTCTAAGAAATGTTCCTGT+TGG + chr8.3:67088463-67088482 MS.gene068379:CDS 35.0%
!! CATGTCTTGCAAAAGTATCT+TGG - chr8.3:67088418-67088437 None:intergenic 35.0%
!! TAACCTAGCTTTTCCATCTA+TGG + chr8.3:67088633-67088652 MS.gene068379:CDS 35.0%
AGATGTGAAACTTGTAGGGT+TGG - chr8.3:67088574-67088593 None:intergenic 40.0%
CTAAGAAATGTTCCTGTTGG+AGG + chr8.3:67088466-67088485 MS.gene068379:CDS 40.0%
TAGCTCCTAATTCATGTCCA+AGG + chr8.3:67088287-67088306 MS.gene068379:CDS 40.0%
TGCATCTCAACATATGAGGA+TGG - chr8.3:67088685-67088704 None:intergenic 40.0%
TTAGGTGTGGCTAATGATGA+AGG - chr8.3:67088517-67088536 None:intergenic 40.0%
TTCTTCTCTAATCCTTGCCT+TGG - chr8.3:67088307-67088326 None:intergenic 40.0%
! CATGTTCAAGTTCAAGAAGG+TGG + chr8.3:67088907-67088926 MS.gene068379:CDS 40.0%
! CTTGGCCTCCTTGTATTTTA+GGG - chr8.3:67088609-67088628 None:intergenic 40.0%
! GCAAGACATGTAGAAGGTAT+TGG + chr8.3:67088428-67088447 MS.gene068379:CDS 40.0%
! GGAAGACTTTTGTTCCCATT+TGG + chr8.3:67088937-67088956 MS.gene068379:CDS 40.0%
! TCTTGGCCTCCTTGTATTTT+AGG - chr8.3:67088610-67088629 None:intergenic 40.0%
! TTCTACAAGTGGTGTTGAAG+TGG + chr8.3:67088987-67089006 MS.gene068379:CDS 40.0%
!! TGTAGAAGGTATTGGACTGA+AGG + chr8.3:67088436-67088455 MS.gene068379:CDS 40.0%
AGAAATGTTCCTGTTGGAGG+TGG + chr8.3:67088469-67088488 MS.gene068379:CDS 45.0%
ATGCCATGCTTGACCTAAGT+AGG - chr8.3:67088741-67088760 None:intergenic 45.0%
CCTAATTCATGTCCAAGGCA+AGG + chr8.3:67088292-67088311 MS.gene068379:CDS 45.0%
CCTTGCCTTGGACATGAATT+AGG - chr8.3:67088295-67088314 None:intergenic 45.0%
CTTCAGCTCTTGACCTACTT+AGG + chr8.3:67088725-67088744 MS.gene068379:CDS 45.0%
TCTTGCATGGTGAATCCAGA+TGG - chr8.3:67088829-67088848 None:intergenic 45.0%
TGACCTACTTAGGTCAAGCA+TGG + chr8.3:67088735-67088754 MS.gene068379:CDS 45.0%
TGTGAAACTTGTAGGGTTGG+TGG - chr8.3:67088571-67088590 None:intergenic 45.0%
TTTCTTGAACCACCTCCAAC+AGG - chr8.3:67088481-67088500 None:intergenic 45.0%
! GTTCAAGTTCAAGAAGGTGG+TGG + chr8.3:67088910-67088929 MS.gene068379:CDS 45.0%
!! AGAAGGTATTGGACTGAAGG+AGG + chr8.3:67088439-67088458 MS.gene068379:CDS 45.0%
!! CTTGTAGGGTTGGTGGATTT+AGG - chr8.3:67088564-67088583 None:intergenic 45.0%
!! GAATGATGGGTGAAGGATCA+TGG + chr8.3:67089055-67089074 MS.gene068379:CDS 45.0%
!! GTGTTGGTTGAATTGCACCT+TGG - chr8.3:67088358-67088377 None:intergenic 45.0%
!! TGGAATGGAATGATGGGTGA+AGG + chr8.3:67089048-67089067 MS.gene068379:CDS 45.0%
AGGTCAAGCATGGCATCTAG+AGG + chr8.3:67088745-67088764 MS.gene068379:CDS 50.0%
! CAAGTTCAAGAAGGTGGTGG+TGG + chr8.3:67088913-67088932 MS.gene068379:CDS 50.0%
!! AGGGTTGGTGGATTTAGGTC+AGG - chr8.3:67088559-67088578 None:intergenic 50.0%
!! GTTCAAGAAGGTGGTGGTGG+TGG + chr8.3:67088916-67088935 MS.gene068379:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 67088277 67089080 67088277 ID=MS.gene068379
chr8.3 mRNA 67088277 67089080 67088277 ID=MS.gene068379.t1;Parent=MS.gene068379
chr8.3 exon 67088277 67089080 67088277 ID=MS.gene068379.t1.exon1;Parent=MS.gene068379.t1
chr8.3 CDS 67088277 67089080 67088277 ID=cds.MS.gene068379.t1;Parent=MS.gene068379.t1
Gene Sequence

>MS.gene068379

ATGGAAGGGTTAGCTCCTAATTCATGTCCAAGGCAAGGATTAGAGAAGAAAGCAAGGCCACAAGAGCAAATAAATTGTCCAAGGTGCAATTCAACCAACACAAAATTTTGTTATTACAACAACTACAGTCTCACACAACCAAGATACTTTTGCAAGACATGTAGAAGGTATTGGACTGAAGGAGGATCTCTAAGAAATGTTCCTGTTGGAGGTGGTTCAAGAAAGAACAAGAAAATTCCTTCATCATTAGCCACACCTAACAATAGTTCATCAAAAATTCCTGACCTAAATCCACCAACCCTACAAGTTTCACATCTTTCATCTCAAAACCCTAAAATACAAGGAGGCCAAGATCTTAACCTAGCTTTTCCATCTATGGAAAACTATCATCATAATCATGGTATGCCATCCTCATATGTTGAGATGCATAACAATAATGAATCATCATCTTCAGCTCTTGACCTACTTAGGTCAAGCATGGCATCTAGAGGCATAAACCCTTATGCTAATAACAATAATTTAGGGTTGCCAAACTCAAATGCTATTTATCCATCTGGATTCACCATGCAAGAAGTTAAACCTAGTCTTGGATTTACAATTGATGGAATTAATGGAAATAGATCATATGATCATGTTCAAGTTCAAGAAGGTGGTGGTGGTGGAAGACTTTTGTTCCCATTTGGAGATGTTAATGTTAATAATAAACAGCTTTCTACAAGTGGTGTTGAAGTGGAACACAATAAAGATCAACAAGGAAATTCAACTGGATATTGGAATGGAATGATGGGTGAAGGATCATGGTAA
Protein sequence

>MS.gene068379.t1

MEGLAPNSCPRQGLEKKARPQEQINCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIPSSLATPNNSSSKIPDLNPPTLQVSHLSSQNPKIQGGQDLNLAFPSMENYHHNHGMPSSYVEMHNNNESSSSALDLLRSSMASRGINPYANNNNLGLPNSNAIYPSGFTMQEVKPSLGFTIDGINGNRSYDHVQVQEGGGGGRLLFPFGDVNVNNKQLSTSGVEVEHNKDQQGNSTGYWNGMMGEGSW