AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene068687

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068687.t1 MTR_8g005750 81.333 300 31 6 5 302 3 279 5.94e-164 457
MS.gene068687.t1 MTR_8g032510 47.284 313 112 12 6 300 7 284 1.10e-72 226
MS.gene068687.t1 MTR_0002s1250 50.189 265 98 9 1 253 1 243 5.97e-71 220
MS.gene068687.t1 MTR_7g073430 41.156 294 136 7 4 287 11 277 5.23e-65 206
MS.gene068687.t1 MTR_7g073380 44.710 293 137 9 4 287 12 288 1.29e-64 205
MS.gene068687.t1 MTR_2g075690 41.096 219 105 5 9 205 18 234 1.99e-46 158
MS.gene068687.t1 MTR_2g075700 39.024 246 113 7 2 214 10 251 1.55e-40 143
MS.gene068687.t1 MTR_2g075680 41.597 238 107 10 6 213 14 249 1.91e-37 135
MS.gene068687.t1 MTR_5g067700 34.498 229 112 4 8 236 15 205 1.21e-34 126
MS.gene068687.t1 MTR_2g075610 51.818 110 52 1 91 200 8 116 1.11e-31 117
MS.gene068687.t1 MTR_3g093830 44.379 169 80 6 13 172 23 186 1.78e-31 119
MS.gene068687.t1 MTR_2g075750 51.887 106 41 2 98 198 13 113 1.14e-30 114
MS.gene068687.t1 MTR_7g117200 37.288 177 95 5 4 172 9 177 1.92e-26 106
MS.gene068687.t1 MTR_3g090860 30.288 208 113 3 1 182 1 202 1.22e-23 99.0
MS.gene068687.t1 MTR_8g099350 31.795 195 105 4 8 181 13 200 6.33e-23 97.4
MS.gene068687.t1 MTR_8g027860 46.667 90 41 1 94 176 110 199 5.28e-20 89.0
MS.gene068687.t1 MTR_5g067680 53.731 67 31 0 108 174 197 263 2.36e-18 84.7
MS.gene068687.t1 MTR_7g028415 54.237 59 24 1 113 171 93 148 1.74e-14 70.5
MS.gene068687.t1 MTR_7g028710 54.237 59 24 1 113 171 93 148 1.74e-14 70.5
MS.gene068687.t1 MTR_7g079010 53.125 64 25 2 113 174 141 201 2.13e-14 71.2
MS.gene068687.t1 MTR_8g092140 41.333 75 41 1 113 187 160 231 1.82e-13 68.9
MS.gene068687.t1 MTR_7g062220 56.897 58 22 1 113 170 124 178 6.49e-13 68.6
MS.gene068687.t1 MTR_3g095080 47.458 59 28 1 113 171 168 223 8.40e-13 67.4
MS.gene068687.t1 MTR_3g095080 47.458 59 28 1 113 171 144 199 1.24e-12 66.2
MS.gene068687.t1 MTR_5g043880 50.000 58 26 1 113 170 124 178 2.16e-12 66.6
MS.gene068687.t1 MTR_8g028565 43.590 78 40 2 96 171 136 211 3.25e-12 66.6
MS.gene068687.t1 MTR_4g094588 51.724 58 25 1 113 170 178 232 3.89e-12 66.2
MS.gene068687.t1 MTR_5g091390 50.000 58 26 1 113 170 157 211 4.57e-12 65.9
MS.gene068687.t1 MTR_8g007270 50.000 58 26 1 113 170 154 208 5.01e-12 64.7
MS.gene068687.t1 MTR_5g073620 37.500 96 52 3 111 202 670 761 1.05e-11 65.9
MS.gene068687.t1 MTR_8g096730 36.047 86 50 2 85 170 44 124 1.99e-11 61.2
MS.gene068687.t1 MTR_1g086790 47.458 59 28 1 113 171 158 213 2.75e-11 63.5
MS.gene068687.t1 MTR_2g033820 47.458 59 28 1 113 171 203 258 4.09e-11 63.5
MS.gene068687.t1 MTR_4g122530 44.828 58 29 1 113 170 208 262 7.54e-11 62.8
MS.gene068687.t1 MTR_7g109800 47.458 59 28 1 113 171 145 200 7.81e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene068687.t1 AT3G56400 38.674 181 88 6 6 173 10 180 3.36e-32 121
MS.gene068687.t1 AT2G46400 34.536 194 111 5 7 200 8 185 4.88e-26 104
MS.gene068687.t1 AT1G66550 32.524 206 109 7 6 203 8 191 6.09e-26 103
MS.gene068687.t1 AT1G66600 33.846 195 108 4 6 199 8 182 1.40e-25 102
MS.gene068687.t1 AT1G66560 35.533 197 100 6 7 199 9 182 2.41e-25 102
MS.gene068687.t1 AT1G66550 32.057 209 101 6 6 203 8 186 4.96e-25 101
MS.gene068687.t1 AT4G11070 30.964 197 112 2 3 175 7 203 9.46e-24 99.0
MS.gene068687.t1 AT5G22570 32.512 203 115 6 5 197 8 198 1.94e-23 97.8
MS.gene068687.t1 AT2G40750 29.060 234 130 6 6 207 14 243 4.02e-22 95.1
MS.gene068687.t1 AT5G01900 36.416 173 98 5 4 172 5 169 1.02e-21 92.4
MS.gene068687.t1 AT4G11070 32.432 185 93 3 3 175 7 171 5.10e-20 88.2
MS.gene068687.t1 AT1G80590 36.800 125 70 3 82 201 49 169 3.51e-19 85.1
MS.gene068687.t1 AT2G40740 44.792 96 40 2 90 172 137 232 4.50e-19 85.9
MS.gene068687.t1 AT5G24110 32.000 175 101 4 4 174 14 174 4.62e-19 85.9
MS.gene068687.t1 AT2G40740 44.792 96 40 2 90 172 146 241 5.95e-19 85.5
MS.gene068687.t1 AT4G23810 46.591 88 40 1 94 174 132 219 2.43e-18 84.3
MS.gene068687.t1 AT1G64000 45.946 74 32 3 113 184 114 181 2.15e-13 68.2
MS.gene068687.t1 AT2G46130 51.724 58 25 1 113 170 30 84 2.41e-13 65.9
MS.gene068687.t1 AT1G69310 50.000 58 26 1 113 170 147 201 8.06e-13 67.8
MS.gene068687.t1 AT1G69310 50.000 58 26 1 113 170 147 201 8.06e-13 67.8
MS.gene068687.t1 AT1G69310 50.000 58 26 1 113 170 147 201 8.06e-13 67.8
MS.gene068687.t1 AT5G45260 48.485 66 32 1 107 170 1200 1265 1.12e-12 68.9
MS.gene068687.t1 AT5G49520 50.847 59 26 1 113 171 221 276 1.36e-12 68.2
MS.gene068687.t1 AT5G41570 46.875 64 29 2 113 174 98 158 2.97e-12 64.7
MS.gene068687.t1 AT2G44745 50.000 58 26 1 113 170 145 199 2.99e-12 65.5
MS.gene068687.t1 AT5G46350 40.909 88 44 3 113 195 183 267 3.37e-12 66.6
MS.gene068687.t1 AT4G39410 46.552 58 28 1 113 170 223 277 3.46e-12 66.2
MS.gene068687.t1 AT4G18170 41.667 96 49 3 77 170 136 226 4.68e-12 65.9
MS.gene068687.t1 AT1G29860 39.326 89 46 2 113 196 136 221 4.80e-12 65.5
MS.gene068687.t1 AT5G13080 49.153 59 27 1 113 171 67 122 9.79e-12 62.4
MS.gene068687.t1 AT4G01250 32.258 124 81 2 47 170 63 183 1.03e-11 64.7
MS.gene068687.t1 AT3G62340 37.755 98 46 3 113 198 118 212 5.14e-11 62.4

Find 61 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATACACACCTTGAGTATT+TGG 0.198242 8.3:+82119776 None:intergenic
GAAATAGATTTATCTAAAAT+TGG 0.218405 8.3:+82119271 None:intergenic
TGATGTCGACGATGATAAAA+AGG 0.250505 8.3:+82119381 None:intergenic
TCTGCACTTGTTTGGTTGCT+TGG 0.276455 8.3:+82119569 None:intergenic
ACAAGATGTTGGGCAAATAA+TGG 0.285380 8.3:+82120376 None:intergenic
TTGAATTCTCTGCACTTGTT+TGG 0.343489 8.3:+82119561 None:intergenic
CAAGATGTTGGGCAAATAAT+GGG 0.348277 8.3:+82120377 None:intergenic
CAAGGAGAACTCACCTTCCT+TGG 0.368416 8.3:-82119317 MS.gene068687:CDS
TTTGATGATGTTTGTTCAAA+AGG 0.368943 8.3:+82120317 None:intergenic
GATTTATCTAAAATTGGTTC+AGG 0.379960 8.3:+82119277 None:intergenic
ACAAGTGTGGTGGCCGTAAT+AGG 0.383562 8.3:+82119513 None:intergenic
ACCTTGAGTATTTGGAATTG+AGG 0.393271 8.3:+82119784 None:intergenic
TATAATTGAAAGCCATGAAA+AGG 0.416194 8.3:+82119121 None:intergenic
CAACAGATGATGGGCATGAA+TGG 0.421200 8.3:-82119830 MS.gene068687:CDS
CAATCTTGTTCGGTTGGAGT+TGG 0.425942 8.3:+82119406 None:intergenic
TTGTATAAGACCACCTATTA+CGG 0.432341 8.3:-82119526 MS.gene068687:CDS
GGGCATGAATGGAGAAAGTA+TGG 0.453906 8.3:-82119819 MS.gene068687:CDS
AACGTTGCTTACAAGATGTT+GGG 0.454457 8.3:+82120366 None:intergenic
GTTGTTAAAGCTAAGCAATA+TGG 0.457680 8.3:+82119435 None:intergenic
TCAGAAAGACCAACAGATGA+TGG 0.460980 8.3:-82119840 MS.gene068687:CDS
CAACGTTGCTTACAAGATGT+TGG 0.464878 8.3:+82120365 None:intergenic
CACTTGAATCTGATGATCAC+AGG 0.481025 8.3:-82119210 MS.gene068687:CDS
TTTGAACAAACATCATCAAA+GGG 0.495098 8.3:-82120314 MS.gene068687:CDS
TTTAACTATTAAATCTGAAG+AGG 0.496351 8.3:-82120278 MS.gene068687:CDS
CATTCATGCCCATCATCTGT+TGG 0.504398 8.3:+82119831 None:intergenic
TGATAGAGATGAGGCAATGA+AGG 0.505201 8.3:-82120482 MS.gene068687:CDS
AAGGGACAATCTTGTTCGGT+TGG 0.505479 8.3:+82119400 None:intergenic
AGTATTATCATGAGGAGAAG+TGG 0.509303 8.3:+82119465 None:intergenic
ATAATTGAAAGCCATGAAAA+GGG 0.510799 8.3:+82119122 None:intergenic
GATATGATGATAATATTGTA+TGG 0.516217 8.3:-82119187 MS.gene068687:CDS
CTAGAGGATCTCACAAAAGA+AGG 0.538260 8.3:-82120216 MS.gene068687:intron
GATGTTTGTTCAAAAGGAAG+AGG 0.548943 8.3:+82120323 None:intergenic
GTGAGATCCTCTAGCACCAC+GGG 0.549156 8.3:+82120225 None:intergenic
ATATATGCAGGGACTACTAC+AGG 0.552760 8.3:-82119618 MS.gene068687:intron
TAATAGGTGGTCTTATACAA+GGG 0.559513 8.3:+82119529 None:intergenic
TAGATAAATCTATTTCTACA+AGG 0.566016 8.3:-82119264 MS.gene068687:CDS
TCCTCAATTCCAAATACTCA+AGG 0.566315 8.3:-82119785 MS.gene068687:intron
GTATTATCATGAGGAGAAGT+GGG 0.567061 8.3:+82119466 None:intergenic
CAGAAAGACCAACAGATGAT+GGG 0.573763 8.3:-82119839 MS.gene068687:CDS
ATGTTTGTTCAAAAGGAAGA+GGG 0.576811 8.3:+82120324 None:intergenic
GTAATAGGTGGTCTTATACA+AGG 0.578341 8.3:+82119528 None:intergenic
AGTTCCACCCGTGGTGCTAG+AGG 0.580528 8.3:-82120232 MS.gene068687:CDS
AGAGAGCAGGTATTCATCCA+AGG 0.581141 8.3:+82119300 None:intergenic
GAAAGCCATGAAAAGGGTGA+AGG 0.584427 8.3:+82119128 None:intergenic
GCAATATTCCACTGAAAGTG+AGG 0.588997 8.3:+82119339 None:intergenic
ACTTTCAGTGGAATATTGCA+AGG 0.591517 8.3:-82119335 MS.gene068687:CDS
AGCAGGTATTCATCCAAGGA+AGG 0.605278 8.3:+82119304 None:intergenic
GTTAAAGCTAAGCAATATGG+AGG 0.618068 8.3:+82119438 None:intergenic
TATTGTCTTTGTTACAAGTG+TGG 0.619139 8.3:+82119500 None:intergenic
TGTCTTTGTTACAAGTGTGG+TGG 0.626053 8.3:+82119503 None:intergenic
GAGGAAGTAGTATTATCATG+AGG 0.627255 8.3:+82119457 None:intergenic
AAATTGGTTCAGGAGAGAGC+AGG 0.628355 8.3:+82119287 None:intergenic
GCAATGAAGGAGCTTGTGAG+AGG 0.633274 8.3:-82120469 MS.gene068687:CDS
CAATGAAGGAGCTTGTGAGA+GGG 0.635141 8.3:-82120468 MS.gene068687:CDS
TGTGAGATCCTCTAGCACCA+CGG 0.642464 8.3:+82120224 None:intergenic
AGATCCTCTAGCACCACGGG+TGG 0.645633 8.3:+82120228 None:intergenic
AGTGTGGTGGCCGTAATAGG+TGG 0.645916 8.3:+82119516 None:intergenic
AAATATGGATGATAGAGATG+AGG 0.650081 8.3:-82120491 None:intergenic
ACTTGAATCTGATGATCACA+GGG 0.651483 8.3:-82119209 MS.gene068687:CDS
TAGGTGGTCTTATACAAGGG+AGG 0.682870 8.3:+82119532 None:intergenic
TACAAGACTAGTTCCACCCG+TGG 0.693459 8.3:-82120241 MS.gene068687:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATATATATATATA+TGG - chr8.3:82119464-82119483 MS.gene068687:CDS 0.0%
!! TATATATATTAATAATATAT+TGG + chr8.3:82119460-82119479 None:intergenic 0.0%
!! CATATATTAATTCAAATCAT+TGG + chr8.3:82119976-82119995 None:intergenic 15.0%
!!! GAAATAGATTTATCTAAAAT+TGG + chr8.3:82120339-82120358 None:intergenic 15.0%
!! CAAATCATTGGATATATATT+AGG + chr8.3:82119964-82119983 None:intergenic 20.0%
!! GATATGATGATAATATTGTA+TGG - chr8.3:82120420-82120439 MS.gene068687:CDS 20.0%
!! GATTTGAATTAATATATGCA+GGG - chr8.3:82119978-82119997 MS.gene068687:intron 20.0%
!! TGATTTGAATTAATATATGC+AGG - chr8.3:82119977-82119996 MS.gene068687:intron 20.0%
!! TTTAACTATTAAATCTGAAG+AGG - chr8.3:82119329-82119348 MS.gene068687:CDS 20.0%
!!! TAGATAAATCTATTTCTACA+AGG - chr8.3:82120343-82120362 MS.gene068687:CDS 20.0%
! ACAAACTGTGAAAAGTTATT+AGG + chr8.3:82119935-82119954 None:intergenic 25.0%
! ATAATTGAAAGCCATGAAAA+GGG + chr8.3:82120488-82120507 None:intergenic 25.0%
! TATAATTGAAAGCCATGAAA+AGG + chr8.3:82120489-82120508 None:intergenic 25.0%
! TTTGAACAAACATCATCAAA+GGG - chr8.3:82119293-82119312 MS.gene068687:CDS 25.0%
!! GAACATTTTCTATAGAATCA+TGG - chr8.3:82119649-82119668 MS.gene068687:intron 25.0%
!! GATTTATCTAAAATTGGTTC+AGG + chr8.3:82120333-82120352 None:intergenic 25.0%
!! TAGAATCATGGTTAAGTTTT+TGG - chr8.3:82119661-82119680 MS.gene068687:intron 25.0%
!! TTTTGAACAAACATCATCAA+AGG - chr8.3:82119292-82119311 MS.gene068687:CDS 25.0%
!!! AAGTAGTTTGAGTTTTAACA+AGG + chr8.3:82119571-82119590 None:intergenic 25.0%
!!! TTTGATGATGTTTGTTCAAA+AGG + chr8.3:82119293-82119312 None:intergenic 25.0%
AACATGAAATTCTCATTGTG+TGG - chr8.3:82119536-82119555 MS.gene068687:CDS 30.0%
ATATACACACCTTGAGTATT+TGG + chr8.3:82119834-82119853 None:intergenic 30.0%
ATGTTTGTTCAAAAGGAAGA+GGG + chr8.3:82119286-82119305 None:intergenic 30.0%
GTTGTTAAAGCTAAGCAATA+TGG + chr8.3:82120175-82120194 None:intergenic 30.0%
TAAAAAGGGACAATCTTGTT+CGG + chr8.3:82120214-82120233 None:intergenic 30.0%
TATTGTCTTTGTTACAAGTG+TGG + chr8.3:82120110-82120129 None:intergenic 30.0%
TTGTATAAGACCACCTATTA+CGG - chr8.3:82120081-82120100 MS.gene068687:intron 30.0%
!! AACTTTTCACAGTTTGTTCA+GGG - chr8.3:82119938-82119957 MS.gene068687:intron 30.0%
!! TAACTTTTCACAGTTTGTTC+AGG - chr8.3:82119937-82119956 MS.gene068687:intron 30.0%
!! TAATAGGTGGTCTTATACAA+GGG + chr8.3:82120081-82120100 None:intergenic 30.0%
!! TTTTAATTCCTCACTTTCAG+TGG - chr8.3:82120260-82120279 MS.gene068687:CDS 30.0%
AAAAACTACAGAAACGTGTG+AGG - chr8.3:82119739-82119758 MS.gene068687:intron 35.0%
AACGTTGCTTACAAGATGTT+GGG + chr8.3:82119244-82119263 None:intergenic 35.0%
ACAAGATGTTGGGCAAATAA+TGG + chr8.3:82119234-82119253 None:intergenic 35.0%
ACTTGAATCTGATGATCACA+GGG - chr8.3:82120398-82120417 MS.gene068687:CDS 35.0%
ACTTTCAGTGGAATATTGCA+AGG - chr8.3:82120272-82120291 MS.gene068687:CDS 35.0%
AGTATTATCATGAGGAGAAG+TGG + chr8.3:82120145-82120164 None:intergenic 35.0%
CAAGATGTTGGGCAAATAAT+GGG + chr8.3:82119233-82119252 None:intergenic 35.0%
GAGGAAGTAGTATTATCATG+AGG + chr8.3:82120153-82120172 None:intergenic 35.0%
GATGTCGACGATGATAAAAA+GGG + chr8.3:82120228-82120247 None:intergenic 35.0%
GATGTTTGTTCAAAAGGAAG+AGG + chr8.3:82119287-82119306 None:intergenic 35.0%
GTATTATCATGAGGAGAAGT+GGG + chr8.3:82120144-82120163 None:intergenic 35.0%
GTTAAAGCTAAGCAATATGG+AGG + chr8.3:82120172-82120191 None:intergenic 35.0%
TATTAGGAAACAGATCGATG+AGG + chr8.3:82119919-82119938 None:intergenic 35.0%
TCCTCAATTCCAAATACTCA+AGG - chr8.3:82119822-82119841 MS.gene068687:CDS 35.0%
TGATGTCGACGATGATAAAA+AGG + chr8.3:82120229-82120248 None:intergenic 35.0%
TTGAATTCTCTGCACTTGTT+TGG + chr8.3:82120049-82120068 None:intergenic 35.0%
! ACCTTGAGTATTTGGAATTG+AGG + chr8.3:82119826-82119845 None:intergenic 35.0%
!! GTAATAGGTGGTCTTATACA+AGG + chr8.3:82120082-82120101 None:intergenic 35.0%
!! TCATGGTTAAGTTTTTGGAG+TGG - chr8.3:82119666-82119685 MS.gene068687:intron 35.0%
ATATATGCAGGGACTACTAC+AGG - chr8.3:82119989-82120008 MS.gene068687:intron 40.0%
CAACGTTGCTTACAAGATGT+TGG + chr8.3:82119245-82119264 None:intergenic 40.0%
CACTTGAATCTGATGATCAC+AGG - chr8.3:82120397-82120416 MS.gene068687:CDS 40.0%
CAGAAAGACCAACAGATGAT+GGG - chr8.3:82119768-82119787 MS.gene068687:intron 40.0%
CTAGAGGATCTCACAAAAGA+AGG - chr8.3:82119391-82119410 MS.gene068687:CDS 40.0%
GCAATATTCCACTGAAAGTG+AGG + chr8.3:82120271-82120290 None:intergenic 40.0%
TCAGAAAGACCAACAGATGA+TGG - chr8.3:82119767-82119786 MS.gene068687:intron 40.0%
TGATAGAGATGAGGCAATGA+AGG - chr8.3:82119125-82119144 MS.gene068687:CDS 40.0%
TGTCTTTGTTACAAGTGTGG+TGG + chr8.3:82120107-82120126 None:intergenic 40.0%
! AGTCATGTTGTTTGCTAGCT+AGG - chr8.3:82119621-82119640 MS.gene068687:intron 40.0%
! GATTTCCTTCACCCTTTTCA+TGG - chr8.3:82120474-82120493 MS.gene068687:CDS 40.0%
AAGGGACAATCTTGTTCGGT+TGG + chr8.3:82120210-82120229 None:intergenic 45.0%
AGAGAGCAGGTATTCATCCA+AGG + chr8.3:82120310-82120329 None:intergenic 45.0%
AGCAGGTATTCATCCAAGGA+AGG + chr8.3:82120306-82120325 None:intergenic 45.0%
CAATCTTGTTCGGTTGGAGT+TGG + chr8.3:82120204-82120223 None:intergenic 45.0%
CAATGAAGGAGCTTGTGAGA+GGG - chr8.3:82119139-82119158 MS.gene068687:CDS 45.0%
CATTCATGCCCATCATCTGT+TGG + chr8.3:82119779-82119798 None:intergenic 45.0%
GAAAGCCATGAAAAGGGTGA+AGG + chr8.3:82120482-82120501 None:intergenic 45.0%
GGGCATGAATGGAGAAAGTA+TGG - chr8.3:82119788-82119807 MS.gene068687:CDS 45.0%
TAGGAAACAGATCGATGAGG+AGG + chr8.3:82119916-82119935 None:intergenic 45.0%
TCTGCACTTGTTTGGTTGCT+TGG + chr8.3:82120041-82120060 None:intergenic 45.0%
! AAATTGGTTCAGGAGAGAGC+AGG + chr8.3:82120323-82120342 None:intergenic 45.0%
!! CAACAGATGATGGGCATGAA+TGG - chr8.3:82119777-82119796 MS.gene068687:intron 45.0%
!! TAGGTGGTCTTATACAAGGG+AGG + chr8.3:82120078-82120097 None:intergenic 45.0%
ACAAGTGTGGTGGCCGTAAT+AGG + chr8.3:82120097-82120116 None:intergenic 50.0%
CAAGGAGAACTCACCTTCCT+TGG - chr8.3:82120290-82120309 MS.gene068687:CDS 50.0%
GCAATGAAGGAGCTTGTGAG+AGG - chr8.3:82119138-82119157 MS.gene068687:CDS 50.0%
TGTGAGATCCTCTAGCACCA+CGG + chr8.3:82119386-82119405 None:intergenic 50.0%
! TACAAGACTAGTTCCACCCG+TGG - chr8.3:82119366-82119385 MS.gene068687:CDS 50.0%
AGTGTGGTGGCCGTAATAGG+TGG + chr8.3:82120094-82120113 None:intergenic 55.0%
GTGAGATCCTCTAGCACCAC+GGG + chr8.3:82119385-82119404 None:intergenic 55.0%
AGATCCTCTAGCACCACGGG+TGG + chr8.3:82119382-82119401 None:intergenic 60.0%
! AGTTCCACCCGTGGTGCTAG+AGG - chr8.3:82119375-82119394 MS.gene068687:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 82119120 82120509 82119120 ID=MS.gene068687
chr8.3 mRNA 82119120 82120509 82119120 ID=MS.gene068687.t1;Parent=MS.gene068687
chr8.3 exon 82120217 82120509 82120217 ID=MS.gene068687.t1.exon1;Parent=MS.gene068687.t1
chr8.3 CDS 82120217 82120509 82120217 ID=cds.MS.gene068687.t1;Parent=MS.gene068687.t1
chr8.3 exon 82119786 82119890 82119786 ID=MS.gene068687.t1.exon2;Parent=MS.gene068687.t1
chr8.3 CDS 82119786 82119890 82119786 ID=cds.MS.gene068687.t1;Parent=MS.gene068687.t1
chr8.3 exon 82119120 82119630 82119120 ID=MS.gene068687.t1.exon3;Parent=MS.gene068687.t1
chr8.3 CDS 82119120 82119630 82119120 ID=cds.MS.gene068687.t1;Parent=MS.gene068687.t1
Gene Sequence

>MS.gene068687

ATGGATGATAGAGATGAGGCAATGAAGGAGCTTGTGAGAGGGCGTGAGTTAGCTAAGCAGCTTGAACAACATCTCAGTAACAACAACAACATTAATGATGAATTAGCAAGCCCATTATTTGCCCAACATCTTGTAAGCAACGTTGTCAACTCATTTAGTAACACCCTCTTCCTTTTGAACAAACATCATCAAAGGGAACAGAACTTTTCTTTAACTATTAAATCTGAAGAGGAATCTCAAGATAGTTACAAGACTAGTTCCACCCGTGGTGCTAGAGGATCTCACAAAAGAAGGTACTTATAATGATTAATTATATATCAATCATTTCTTTTAATTTCCAATATATTATTAATATATATATATATGGTCATGAATTTAGCTAATGAATTTAAATTTATTATTTGTTATAATAGTTTAACATGAAATTCTCATTGTGTGGCACTATCTTCCTTGTTAAAACTCAAACTACTTAAGTTGAATTAATTAACACTCTTTAAAAACAGTCATGTTGTTTGCTAGCTAGGAATATGAACATTTTCTATAGAATCATGGTTAAGTTTTTGGAGTGGATATTAAATTAAAATTATGATAACAGAATTAATTTCTTGTTAATTTGCAGAAAAACTACAGAAACGTGTGAGGAAGTGTCAGAAAGACCAACAGATGATGGGCATGAATGGAGAAAGTATGGTCAAAAAACAATCCTCAATTCCAAATACTCAAGGTGTGTATATGTACGTATATGTCTCAATCAATTATAATTAGTTCGAACTTAATTCATCTATATATAATTCCTCCTCATCGATCTGTTTCCTAATAACTTTTCACAGTTTGTTCAGGGCCTAATATATATCCAATGATTTGAATTAATATATGCAGGGACTACTACAGGTGTACTCACAAGTTTAATCAAAGATGCCAAGCAACCAAACAAGTGCAGAGAATTCAAGAGAAGCCTCCCTTGTATAAGACCACCTATTACGGCCACCACACTTGTAACAAAGACAATATCATATTTGAACCCACTTCTCCTCATGATAATACTACTTCCTCCATATTGCTTAGCTTTAACAACACATTTCCAACTCCAACCGAACAAGATTGTCCCTTTTTATCATCGTCGACATCATCATCTTCGTCTTTTAATTCCTCACTTTCAGTGGAATATTGCAAGGAGAACTCACCTTCCTTGGATGAATACCTGCTCTCTCCTGAACCAATTTTAGATAAATCTATTTCTACAAGGCATGTTCGTAGTACTCTATCATCATCAACTACACTTGAATCTGATGATCACAGGGATATGATGATAATATTGTATGGTCTCTTGTATGATTCTGTTGAACTTGATACTGATTTCCTTCACCCTTTTCATGGCTTTCAATTATAG
Protein sequence

>MS.gene068687.t1

MDDRDEAMKELVRGRELAKQLEQHLSNNNNINDELASPLFAQHLVSNVVNSFSNTLFLLNKHHQREQNFSLTIKSEEESQDSYKTSSTRGARGSHKRRKTTETCEEVSERPTDDGHEWRKYGQKTILNSKYSRDYYRCTHKFNQRCQATKQVQRIQEKPPLYKTTYYGHHTCNKDNIIFEPTSPHDNTTSSILLSFNNTFPTPTEQDCPFLSSSTSSSSSFNSSLSVEYCKENSPSLDEYLLSPEPILDKSISTRHVRSTLSSSTTLESDDHRDMMIILYGLLYDSVELDTDFLHPFHGFQL