Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068940.t1 | RHN40605.1 | 92.8 | 348 | 19 | 4 | 1 | 345 | 1 | 345 | 1.90E-172 | 615.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068940.t1 | Q9SAK5 | 53.2 | 365 | 141 | 10 | 4 | 345 | 1 | 358 | 1.9e-80 | 300.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068940.t1 | A0A396GPI2 | 92.8 | 348 | 19 | 4 | 1 | 345 | 1 | 345 | 1.4e-172 | 615.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene068940.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068940.t1 | MTR_6g444980 | 65.464 | 388 | 78 | 18 | 1 | 345 | 1 | 375 | 1.30e-147 | 421 |
MS.gene068940.t1 | MTR_6g444980 | 60.677 | 384 | 76 | 18 | 1 | 345 | 1 | 348 | 3.45e-129 | 373 |
MS.gene068940.t1 | MTR_5g027440 | 45.798 | 238 | 92 | 11 | 13 | 219 | 1 | 232 | 1.05e-51 | 173 |
MS.gene068940.t1 | MTR_2g086450 | 52.941 | 170 | 63 | 2 | 26 | 178 | 35 | 204 | 9.44e-51 | 174 |
MS.gene068940.t1 | MTR_4g081710 | 55.195 | 154 | 61 | 1 | 29 | 174 | 10 | 163 | 1.71e-50 | 171 |
MS.gene068940.t1 | MTR_6g032990 | 46.190 | 210 | 91 | 7 | 29 | 221 | 35 | 239 | 4.57e-50 | 172 |
MS.gene068940.t1 | MTR_5g041350 | 55.414 | 157 | 61 | 2 | 29 | 176 | 8 | 164 | 3.97e-49 | 168 |
MS.gene068940.t1 | MTR_2g027800 | 53.529 | 170 | 67 | 4 | 24 | 183 | 27 | 194 | 1.26e-46 | 160 |
MS.gene068940.t1 | MTR_1g090670 | 52.381 | 168 | 67 | 4 | 15 | 173 | 23 | 186 | 2.11e-45 | 157 |
MS.gene068940.t1 | MTR_7g088070 | 54.545 | 154 | 54 | 5 | 36 | 182 | 50 | 194 | 1.10e-44 | 154 |
MS.gene068940.t1 | MTR_2g027860 | 59.398 | 133 | 51 | 2 | 36 | 167 | 49 | 179 | 8.83e-44 | 154 |
MS.gene068940.t1 | MTR_7g088070 | 53.247 | 154 | 52 | 4 | 36 | 182 | 50 | 190 | 2.61e-43 | 151 |
MS.gene068940.t1 | MTR_2g027800 | 47.191 | 178 | 52 | 4 | 24 | 183 | 27 | 180 | 1.27e-40 | 144 |
MS.gene068940.t1 | MTR_7g098250 | 38.164 | 207 | 109 | 6 | 36 | 236 | 262 | 455 | 3.54e-36 | 137 |
MS.gene068940.t1 | MTR_1g080330 | 40.237 | 169 | 85 | 4 | 2 | 167 | 148 | 303 | 6.29e-34 | 129 |
MS.gene068940.t1 | MTR_7g115530 | 41.722 | 151 | 77 | 3 | 36 | 183 | 218 | 360 | 7.78e-34 | 129 |
MS.gene068940.t1 | MTR_1g053835 | 42.657 | 143 | 71 | 3 | 32 | 171 | 254 | 388 | 6.31e-30 | 119 |
MS.gene068940.t1 | MTR_7g093030 | 40.714 | 140 | 75 | 3 | 36 | 173 | 212 | 345 | 6.29e-29 | 115 |
MS.gene068940.t1 | MTR_1g080330 | 39.865 | 148 | 73 | 4 | 2 | 146 | 148 | 282 | 1.97e-26 | 106 |
MS.gene068940.t1 | MTR_7g115530 | 44.737 | 114 | 54 | 2 | 36 | 146 | 218 | 325 | 3.98e-26 | 106 |
MS.gene068940.t1 | MTR_7g068600 | 43.182 | 132 | 69 | 2 | 36 | 164 | 13 | 141 | 2.93e-25 | 102 |
MS.gene068940.t1 | MTR_1g053800 | 39.103 | 156 | 83 | 2 | 26 | 177 | 167 | 314 | 5.10e-25 | 103 |
MS.gene068940.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 36 | 92 | 218 | 274 | 8.63e-20 | 88.6 |
MS.gene068940.t1 | MTR_7g115530 | 63.158 | 57 | 21 | 0 | 36 | 92 | 218 | 274 | 3.42e-19 | 87.8 |
MS.gene068940.t1 | MTR_1g090670 | 46.087 | 115 | 49 | 4 | 68 | 173 | 1 | 111 | 4.49e-19 | 85.1 |
MS.gene068940.t1 | MTR_7g115530 | 66.038 | 53 | 18 | 0 | 36 | 88 | 218 | 270 | 3.29e-18 | 83.6 |
MS.gene068940.t1 | MTR_7g093030 | 57.895 | 57 | 24 | 0 | 36 | 92 | 212 | 268 | 5.61e-18 | 83.6 |
MS.gene068940.t1 | MTR_7g115530 | 66.667 | 51 | 17 | 0 | 36 | 86 | 218 | 268 | 2.85e-17 | 81.3 |
MS.gene068940.t1 | MTR_2g023580 | 50.000 | 78 | 37 | 1 | 37 | 112 | 56 | 133 | 8.54e-17 | 79.0 |
MS.gene068940.t1 | MTR_3g450310 | 36.364 | 132 | 62 | 3 | 36 | 158 | 19 | 137 | 3.92e-16 | 76.6 |
MS.gene068940.t1 | MTR_7g069660 | 55.357 | 56 | 25 | 0 | 37 | 92 | 72 | 127 | 1.69e-15 | 77.0 |
MS.gene068940.t1 | MTR_3g064840 | 51.429 | 70 | 34 | 0 | 37 | 106 | 275 | 344 | 2.00e-15 | 77.4 |
MS.gene068940.t1 | MTR_6g071625 | 56.667 | 60 | 26 | 0 | 37 | 96 | 203 | 262 | 2.23e-15 | 76.6 |
MS.gene068940.t1 | MTR_1g112370 | 56.452 | 62 | 22 | 1 | 37 | 93 | 23 | 84 | 2.72e-15 | 76.3 |
MS.gene068940.t1 | MTR_0223s0040 | 62.264 | 53 | 20 | 0 | 37 | 89 | 19 | 71 | 3.79e-15 | 75.1 |
MS.gene068940.t1 | MTR_8g066310 | 58.929 | 56 | 23 | 0 | 37 | 92 | 174 | 229 | 6.25e-15 | 75.5 |
MS.gene068940.t1 | MTR_5g029470 | 58.929 | 56 | 23 | 0 | 37 | 92 | 220 | 275 | 7.82e-15 | 75.5 |
MS.gene068940.t1 | MTR_1g053830 | 49.091 | 55 | 28 | 0 | 38 | 92 | 20 | 74 | 1.07e-14 | 69.7 |
MS.gene068940.t1 | MTR_1g021520 | 57.143 | 56 | 24 | 0 | 37 | 92 | 127 | 182 | 1.62e-14 | 73.6 |
MS.gene068940.t1 | MTR_5g041350 | 71.739 | 46 | 13 | 0 | 131 | 176 | 8 | 53 | 1.88e-14 | 72.4 |
MS.gene068940.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 37 | 92 | 112 | 167 | 2.23e-14 | 73.9 |
MS.gene068940.t1 | MTR_8g086410 | 53.571 | 56 | 26 | 0 | 37 | 92 | 110 | 165 | 2.25e-14 | 73.9 |
MS.gene068940.t1 | MTR_5g041350 | 71.739 | 46 | 13 | 0 | 131 | 176 | 30 | 75 | 3.20e-14 | 72.0 |
MS.gene068940.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 37 | 92 | 90 | 145 | 3.25e-14 | 73.2 |
MS.gene068940.t1 | MTR_2g016220 | 55.357 | 56 | 25 | 0 | 37 | 92 | 90 | 145 | 3.33e-14 | 73.2 |
MS.gene068940.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 37 | 92 | 98 | 153 | 4.11e-14 | 72.4 |
MS.gene068940.t1 | MTR_2g084230 | 55.357 | 56 | 25 | 0 | 37 | 92 | 98 | 153 | 4.16e-14 | 73.2 |
MS.gene068940.t1 | MTR_7g093010 | 37.500 | 128 | 68 | 4 | 36 | 158 | 213 | 333 | 4.43e-14 | 72.8 |
MS.gene068940.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 107 | 164 | 1.15e-13 | 72.4 |
MS.gene068940.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 211 | 268 | 1.39e-13 | 72.0 |
MS.gene068940.t1 | MTR_4g121020 | 59.322 | 59 | 23 | 1 | 32 | 90 | 211 | 268 | 1.39e-13 | 72.0 |
MS.gene068940.t1 | MTR_4g064730 | 53.623 | 69 | 30 | 2 | 23 | 90 | 117 | 184 | 2.82e-13 | 70.1 |
MS.gene068940.t1 | MTR_8g086410 | 56.000 | 50 | 22 | 0 | 37 | 86 | 112 | 161 | 3.20e-13 | 70.5 |
MS.gene068940.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 36 | 90 | 131 | 184 | 3.46e-13 | 70.9 |
MS.gene068940.t1 | MTR_2g016220 | 58.000 | 50 | 21 | 0 | 37 | 86 | 90 | 139 | 3.84e-13 | 70.1 |
MS.gene068940.t1 | MTR_1g032570 | 61.818 | 55 | 20 | 1 | 36 | 90 | 200 | 253 | 4.29e-13 | 70.5 |
MS.gene068940.t1 | MTR_7g089010 | 61.818 | 55 | 20 | 1 | 36 | 90 | 91 | 144 | 5.46e-13 | 68.9 |
MS.gene068940.t1 | MTR_1g093080 | 60.000 | 55 | 22 | 0 | 36 | 90 | 211 | 265 | 9.54e-13 | 68.9 |
MS.gene068940.t1 | MTR_2g034960 | 54.237 | 59 | 26 | 1 | 32 | 90 | 207 | 264 | 2.02e-12 | 68.6 |
MS.gene068940.t1 | MTR_5g017980 | 60.000 | 55 | 22 | 0 | 36 | 90 | 193 | 247 | 2.50e-12 | 67.4 |
MS.gene068940.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 36 | 90 | 198 | 252 | 9.81e-12 | 65.9 |
MS.gene068940.t1 | MTR_4g021790 | 52.542 | 59 | 27 | 1 | 32 | 90 | 164 | 221 | 1.01e-11 | 65.1 |
MS.gene068940.t1 | MTR_4g086835 | 55.172 | 58 | 26 | 0 | 33 | 90 | 271 | 328 | 3.97e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068940.t1 | AT1G79430 | 54.247 | 365 | 137 | 9 | 4 | 345 | 1 | 358 | 9.88e-115 | 337 |
MS.gene068940.t1 | AT1G79430 | 47.333 | 300 | 129 | 8 | 68 | 345 | 1 | 293 | 7.41e-71 | 223 |
MS.gene068940.t1 | AT3G12730 | 61.453 | 179 | 60 | 3 | 25 | 194 | 12 | 190 | 3.32e-67 | 211 |
MS.gene068940.t1 | AT4G13640 | 46.097 | 269 | 106 | 6 | 26 | 269 | 27 | 281 | 4.57e-64 | 205 |
MS.gene068940.t1 | AT3G24120 | 68.790 | 157 | 32 | 4 | 25 | 168 | 30 | 182 | 7.69e-63 | 202 |
MS.gene068940.t1 | AT4G13640 | 45.588 | 272 | 106 | 7 | 26 | 269 | 27 | 284 | 5.45e-62 | 200 |
MS.gene068940.t1 | AT3G24120 | 67.500 | 160 | 32 | 5 | 25 | 168 | 30 | 185 | 1.19e-60 | 197 |
MS.gene068940.t1 | AT5G18240 | 54.082 | 196 | 70 | 6 | 25 | 207 | 34 | 222 | 3.27e-56 | 188 |
MS.gene068940.t1 | AT5G18240 | 54.082 | 196 | 70 | 6 | 25 | 207 | 34 | 222 | 3.27e-56 | 188 |
MS.gene068940.t1 | AT3G04030 | 58.580 | 169 | 58 | 3 | 25 | 181 | 34 | 202 | 1.06e-55 | 187 |
MS.gene068940.t1 | AT5G18240 | 53.061 | 196 | 70 | 7 | 25 | 207 | 34 | 220 | 8.85e-53 | 179 |
MS.gene068940.t1 | AT3G04030 | 57.396 | 169 | 59 | 4 | 25 | 181 | 34 | 201 | 1.46e-52 | 178 |
MS.gene068940.t1 | AT5G18240 | 51.531 | 196 | 69 | 7 | 25 | 207 | 34 | 216 | 1.84e-49 | 170 |
MS.gene068940.t1 | AT5G18240 | 51.531 | 196 | 69 | 7 | 25 | 207 | 34 | 216 | 1.84e-49 | 170 |
MS.gene068940.t1 | AT3G04030 | 55.621 | 169 | 57 | 4 | 25 | 181 | 34 | 196 | 4.47e-49 | 169 |
MS.gene068940.t1 | AT1G69580 | 49.412 | 170 | 72 | 2 | 29 | 184 | 27 | 196 | 1.44e-47 | 164 |
MS.gene068940.t1 | AT1G69580 | 49.123 | 171 | 72 | 2 | 29 | 184 | 27 | 197 | 2.17e-47 | 163 |
MS.gene068940.t1 | AT5G45580 | 41.629 | 221 | 103 | 6 | 26 | 220 | 13 | 233 | 1.11e-45 | 157 |
MS.gene068940.t1 | AT5G45580 | 41.935 | 217 | 100 | 6 | 30 | 220 | 1 | 217 | 9.39e-45 | 154 |
MS.gene068940.t1 | AT2G01060 | 58.333 | 132 | 53 | 1 | 36 | 167 | 15 | 144 | 3.38e-44 | 154 |
MS.gene068940.t1 | AT3G12730 | 53.676 | 136 | 54 | 3 | 68 | 194 | 1 | 136 | 4.70e-37 | 132 |
MS.gene068940.t1 | AT4G28610 | 39.881 | 168 | 91 | 3 | 36 | 199 | 225 | 386 | 7.71e-34 | 129 |
MS.gene068940.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 9.76e-34 | 129 |
MS.gene068940.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 9.76e-34 | 129 |
MS.gene068940.t1 | AT3G13040 | 44.172 | 163 | 76 | 5 | 22 | 171 | 218 | 378 | 9.76e-34 | 129 |
MS.gene068940.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 168 | 319 | 9.13e-32 | 122 |
MS.gene068940.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 168 | 319 | 9.13e-32 | 122 |
MS.gene068940.t1 | AT5G29000 | 41.290 | 155 | 88 | 2 | 13 | 167 | 211 | 362 | 1.56e-31 | 123 |
MS.gene068940.t1 | AT5G06800 | 45.522 | 134 | 70 | 2 | 36 | 167 | 192 | 324 | 3.96e-30 | 118 |
MS.gene068940.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 198 | 329 | 4.04e-30 | 119 |
MS.gene068940.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 198 | 329 | 4.04e-30 | 119 |
MS.gene068940.t1 | AT5G06800 | 46.617 | 133 | 65 | 3 | 36 | 167 | 192 | 319 | 4.87e-30 | 118 |
MS.gene068940.t1 | AT3G04450 | 42.963 | 135 | 71 | 2 | 36 | 167 | 238 | 369 | 5.10e-30 | 119 |
MS.gene068940.t1 | AT3G04030 | 52.381 | 126 | 48 | 3 | 68 | 181 | 1 | 126 | 1.43e-28 | 113 |
MS.gene068940.t1 | AT2G20400 | 39.103 | 156 | 93 | 1 | 36 | 191 | 231 | 384 | 1.23e-27 | 112 |
MS.gene068940.t1 | AT2G20400 | 38.365 | 159 | 89 | 2 | 36 | 191 | 231 | 383 | 1.29e-27 | 112 |
MS.gene068940.t1 | AT5G18240 | 43.791 | 153 | 60 | 7 | 68 | 207 | 1 | 140 | 5.74e-23 | 97.8 |
MS.gene068940.t1 | AT3G04030 | 48.413 | 126 | 47 | 4 | 68 | 181 | 1 | 120 | 2.53e-22 | 95.9 |
MS.gene068940.t1 | AT2G01060 | 49.485 | 97 | 47 | 1 | 71 | 167 | 1 | 95 | 4.52e-21 | 90.9 |
MS.gene068940.t1 | AT2G06020 | 59.375 | 64 | 26 | 0 | 29 | 92 | 79 | 142 | 7.01e-21 | 91.7 |
MS.gene068940.t1 | AT5G06800 | 59.649 | 57 | 23 | 0 | 36 | 92 | 192 | 248 | 5.36e-18 | 83.2 |
MS.gene068940.t1 | AT5G29000 | 48.750 | 80 | 38 | 2 | 13 | 92 | 211 | 287 | 1.91e-17 | 82.0 |
MS.gene068940.t1 | AT3G04450 | 56.140 | 57 | 25 | 0 | 36 | 92 | 238 | 294 | 3.45e-17 | 81.6 |
MS.gene068940.t1 | AT1G14600 | 50.685 | 73 | 31 | 1 | 22 | 89 | 4 | 76 | 1.75e-16 | 78.6 |
MS.gene068940.t1 | AT2G40260 | 60.714 | 56 | 22 | 0 | 37 | 92 | 83 | 138 | 4.35e-16 | 79.3 |
MS.gene068940.t1 | AT2G42660 | 58.929 | 56 | 23 | 0 | 37 | 92 | 51 | 106 | 5.75e-16 | 77.0 |
MS.gene068940.t1 | AT4G04605 | 58.491 | 53 | 22 | 0 | 37 | 89 | 15 | 67 | 6.43e-16 | 76.3 |
MS.gene068940.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 35 | 93 | 28 | 86 | 1.50e-15 | 75.9 |
MS.gene068940.t1 | AT2G02060 | 57.627 | 59 | 25 | 0 | 35 | 93 | 28 | 86 | 1.50e-15 | 75.9 |
MS.gene068940.t1 | AT1G32240 | 56.667 | 60 | 26 | 0 | 37 | 96 | 214 | 273 | 5.11e-15 | 75.9 |
MS.gene068940.t1 | AT5G16560 | 56.667 | 60 | 26 | 0 | 37 | 96 | 220 | 279 | 5.53e-15 | 75.9 |
MS.gene068940.t1 | AT1G32240 | 58.929 | 56 | 23 | 0 | 37 | 92 | 214 | 269 | 6.50e-15 | 75.5 |
MS.gene068940.t1 | AT2G38300 | 57.143 | 56 | 24 | 0 | 37 | 92 | 55 | 110 | 7.38e-15 | 75.1 |
MS.gene068940.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 37 | 92 | 106 | 161 | 1.36e-14 | 72.4 |
MS.gene068940.t1 | AT5G42630 | 57.143 | 56 | 24 | 0 | 37 | 92 | 106 | 161 | 2.06e-14 | 72.8 |
MS.gene068940.t1 | AT4G17695 | 42.857 | 84 | 45 | 1 | 37 | 117 | 165 | 248 | 2.44e-14 | 73.2 |
MS.gene068940.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 4.29e-14 | 72.8 |
MS.gene068940.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 4.29e-14 | 72.8 |
MS.gene068940.t1 | AT3G46640 | 55.714 | 70 | 27 | 2 | 24 | 90 | 129 | 197 | 5.52e-14 | 72.4 |
MS.gene068940.t1 | AT5G59570 | 54.286 | 70 | 28 | 2 | 24 | 90 | 126 | 194 | 8.76e-14 | 71.2 |
MS.gene068940.t1 | AT5G59570 | 54.286 | 70 | 28 | 2 | 24 | 90 | 126 | 194 | 8.76e-14 | 71.2 |
MS.gene068940.t1 | AT5G05090 | 61.818 | 55 | 20 | 1 | 36 | 90 | 81 | 134 | 1.66e-13 | 70.1 |
MS.gene068940.t1 | AT3G10760 | 61.818 | 55 | 20 | 1 | 36 | 90 | 105 | 158 | 2.55e-13 | 70.5 |
MS.gene068940.t1 | AT4G04580 | 47.059 | 68 | 33 | 1 | 37 | 104 | 15 | 79 | 4.69e-13 | 67.0 |
MS.gene068940.t1 | AT2G40970 | 60.000 | 55 | 21 | 1 | 36 | 90 | 105 | 158 | 1.03e-12 | 67.8 |
MS.gene068940.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 38 | 95 | 212 | 269 | 1.04e-12 | 68.9 |
MS.gene068940.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 38 | 95 | 219 | 276 | 1.12e-12 | 68.6 |
MS.gene068940.t1 | AT5G58080 | 31.481 | 162 | 99 | 5 | 33 | 190 | 191 | 344 | 1.43e-12 | 68.9 |
MS.gene068940.t1 | AT3G25790 | 60.000 | 50 | 20 | 0 | 41 | 90 | 201 | 250 | 4.30e-12 | 67.0 |
MS.gene068940.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 167 | 220 | 9.56e-12 | 66.6 |
MS.gene068940.t1 | AT1G49560 | 52.941 | 68 | 31 | 1 | 36 | 102 | 192 | 259 | 1.02e-11 | 65.5 |
MS.gene068940.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 237 | 290 | 1.13e-11 | 66.2 |
MS.gene068940.t1 | AT3G16857 | 56.364 | 55 | 23 | 1 | 36 | 90 | 237 | 290 | 1.20e-11 | 66.2 |
MS.gene068940.t1 | AT2G01760 | 54.545 | 55 | 24 | 1 | 36 | 90 | 135 | 188 | 2.19e-11 | 64.3 |
MS.gene068940.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 36 | 89 | 147 | 199 | 5.18e-11 | 63.9 |
MS.gene068940.t1 | AT5G44190 | 55.556 | 54 | 23 | 1 | 36 | 89 | 147 | 199 | 6.44e-11 | 63.2 |
MS.gene068940.t1 | AT1G13300 | 54.545 | 55 | 25 | 0 | 36 | 90 | 181 | 235 | 6.75e-11 | 63.2 |
Find 78 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTTCCACTTCCATTAAA+AGG | 0.118507 | 8.1:-58413762 | None:intergenic |
TCATTATCATTCCAAATTAT+TGG | 0.120463 | 8.1:-58413786 | None:intergenic |
AATGATTCACCTTTGAAATT+AGG | 0.181239 | 8.1:-58413864 | None:intergenic |
TGATCTTAGGCTTCATGATT+TGG | 0.243321 | 8.1:+58413806 | MS.gene068940:CDS |
ATCATAGTTGAGGGCTTCTT+TGG | 0.252047 | 8.1:-58411582 | None:intergenic |
GTGGAAAGAGTCCAATAATT+TGG | 0.261771 | 8.1:+58413775 | MS.gene068940:CDS |
GTCCATCGAAGCCGAGGTTT+TGG | 0.292562 | 8.1:-58411666 | None:intergenic |
TTTGGAATGATAATGATCTT+AGG | 0.294293 | 8.1:+58413793 | MS.gene068940:CDS |
AAAATACATGCAAAGTATAT+TGG | 0.312337 | 8.1:+58413470 | MS.gene068940:CDS |
AATGATGAAAATTTGTTTGT+TGG | 0.313875 | 8.1:+58413723 | MS.gene068940:CDS |
ATTCAATGAGCAATCTATTA+AGG | 0.315644 | 8.1:+58412302 | MS.gene068940:CDS |
CCACCTTAAGAGCCATCTTC+AGG | 0.346223 | 8.1:+58412113 | MS.gene068940:CDS |
GATCTTAGGCTTCATGATTT+GGG | 0.360986 | 8.1:+58413807 | MS.gene068940:CDS |
AAATGAGGAAAATTATTTAG+AGG | 0.363464 | 8.1:-58413600 | None:intergenic |
TTTGAACTGCAAAGAAATAC+TGG | 0.365692 | 8.1:+58412456 | MS.gene068940:CDS |
TAATTTCAAAGGTGAATCAT+TGG | 0.367186 | 8.1:+58413866 | MS.gene068940:CDS |
GAAACAAATTCTTTCATGTC+AGG | 0.374130 | 8.1:-58413576 | None:intergenic |
AAAGCTTATCACACACTTGC+AGG | 0.378431 | 8.1:+58413495 | MS.gene068940:CDS |
ATAGAGAGGCCAACCCTTGA+TGG | 0.379955 | 8.1:+58413678 | MS.gene068940:CDS |
AAAACAATCATGAGGGTTAT+GGG | 0.394376 | 8.1:+58412069 | MS.gene068940:CDS |
GTTGATGCTGTTGCTCAGCT+TGG | 0.397802 | 8.1:+58411711 | MS.gene068940:CDS |
AAACCTGAAGATGGCTCTTA+AGG | 0.399926 | 8.1:-58412116 | None:intergenic |
TTTCAAGATCTTAACATTTG+TGG | 0.407965 | 8.1:+58413621 | MS.gene068940:CDS |
TTGCTCATTGAATTCCTTGT+GGG | 0.416474 | 8.1:-58412292 | None:intergenic |
ACAAATTTCAAGGGTATGAA+TGG | 0.427658 | 8.1:+58413540 | MS.gene068940:CDS |
ATTTGTTTGTTGGAAAGAAA+AGG | 0.433652 | 8.1:+58413733 | MS.gene068940:CDS |
GAGCCTCAATCCTCAATTGA+AGG | 0.444605 | 8.1:-58413443 | None:intergenic |
AGCTGCAGCTACAAATTTCA+AGG | 0.446327 | 8.1:+58413530 | MS.gene068940:CDS |
TTTGATCCATCTGTGAAGCT+TGG | 0.458634 | 8.1:+58413951 | MS.gene068940:CDS |
GGTAGAAGCTCATCACCATT+TGG | 0.458779 | 8.1:+58414008 | MS.gene068940:CDS |
TTCAAAAGCACCTTCAATTG+AGG | 0.460223 | 8.1:+58413433 | MS.gene068940:CDS |
GCTGCAACAGCATTGATCAT+AGG | 0.461064 | 8.1:-58413984 | None:intergenic |
GATGCTGTTGCTCAGCTTGG+AGG | 0.468617 | 8.1:+58411714 | MS.gene068940:CDS |
AATTAGTATTCTCAACCAAA+TGG | 0.471739 | 8.1:-58414023 | None:intergenic |
TCTTTCCACTTCCATTAAAA+GGG | 0.471840 | 8.1:-58413761 | None:intergenic |
GATGGCTCTTAAGGTGGTAA+AGG | 0.478682 | 8.1:-58412107 | None:intergenic |
TTGAAATTAGGAACATCATC+AGG | 0.480806 | 8.1:-58413852 | None:intergenic |
TGAGAATTCATCATAGTTGA+GGG | 0.480954 | 8.1:-58411591 | None:intergenic |
ATAGTTGAGGGCTTCTTTGG+AGG | 0.483070 | 8.1:-58411579 | None:intergenic |
ATCCAAAACCTCGGCTTCGA+TGG | 0.484201 | 8.1:+58411664 | MS.gene068940:CDS |
TAGGCATTATAATTCCATCA+AGG | 0.485394 | 8.1:-58413692 | None:intergenic |
ATGTGTGTTCAAGGTGACTC+TGG | 0.488847 | 8.1:+58411624 | MS.gene068940:CDS |
GATAGACCCATGTGTGTTCA+AGG | 0.494833 | 8.1:+58411615 | MS.gene068940:CDS |
CATTAATAGAAATTTAGGCT+TGG | 0.499746 | 8.1:+58412261 | MS.gene068940:intron |
AGGCATTATAATTCCATCAA+GGG | 0.502907 | 8.1:-58413691 | None:intergenic |
TAGTTGAGGGCTTCTTTGGA+GGG | 0.504455 | 8.1:-58411578 | None:intergenic |
TTTGTGTTCAAACCTGAAGA+TGG | 0.506495 | 8.1:-58412125 | None:intergenic |
GCACCTTCAATTGAGGATTG+AGG | 0.506889 | 8.1:+58413440 | MS.gene068940:CDS |
GATGATGTTCCTAATTTCAA+AGG | 0.507643 | 8.1:+58413855 | MS.gene068940:CDS |
ATGGCTCTTAAGGTGGTAAA+GGG | 0.519319 | 8.1:-58412106 | None:intergenic |
ATTATAATTCCATCAAGGGT+TGG | 0.522631 | 8.1:-58413687 | None:intergenic |
ATGATCAATGCTGTTGCAGC+TGG | 0.528955 | 8.1:+58413987 | MS.gene068940:CDS |
GGCACCTCGTCTTCTATGAC+TGG | 0.530737 | 8.1:+58412477 | MS.gene068940:CDS |
CACACTTGCAGGTGAAAACA+TGG | 0.531497 | 8.1:+58413506 | MS.gene068940:CDS |
ATGTTAAGATCTTGAAAATG+AGG | 0.534145 | 8.1:-58413615 | None:intergenic |
ATGAGAATTCATCATAGTTG+AGG | 0.541419 | 8.1:-58411592 | None:intergenic |
TTGGATCAGTGGTGAGGACA+AGG | 0.541614 | 8.1:-58411647 | None:intergenic |
CATGAGGGTTATGGGTGTGA+AGG | 0.546666 | 8.1:+58412077 | MS.gene068940:CDS |
AAACAAATTCTTTCATGTCA+GGG | 0.546749 | 8.1:-58413575 | None:intergenic |
GTTATTCCAAGCTTCACAGA+TGG | 0.570892 | 8.1:-58413957 | None:intergenic |
AATGAGCAATCTATTAAGGA+TGG | 0.585044 | 8.1:+58412306 | MS.gene068940:CDS |
ATTGCTCATTGAATTCCTTG+TGG | 0.590023 | 8.1:-58412293 | None:intergenic |
ATGAGGGTTATGGGTGTGAA+GGG | 0.590465 | 8.1:+58412078 | MS.gene068940:CDS |
CCTGAAGATGGCTCTTAAGG+TGG | 0.594196 | 8.1:-58412113 | None:intergenic |
TCGACGGTCCATCGAAGCCG+AGG | 0.598315 | 8.1:-58411672 | None:intergenic |
AAGGGTATGAATGGAACTCA+AGG | 0.599882 | 8.1:+58413549 | MS.gene068940:CDS |
AGAGTCACCTTGAACACACA+TGG | 0.606753 | 8.1:-58411622 | None:intergenic |
TGCTCATTGAATTCCTTGTG+GGG | 0.607189 | 8.1:-58412291 | None:intergenic |
ATCTTCATCAAAACATAGAG+AGG | 0.609398 | 8.1:+58413664 | MS.gene068940:CDS |
TCTATTAAGGATGGTATGAG+AGG | 0.614631 | 8.1:+58412315 | MS.gene068940:CDS |
GCTTGGAAAGCAACCCCACA+AGG | 0.615422 | 8.1:+58412278 | MS.gene068940:CDS |
CAATTGAGGATTGAGGCTCA+AGG | 0.648335 | 8.1:+58413447 | MS.gene068940:CDS |
GCTGCAGCTACAAATTTCAA+GGG | 0.661788 | 8.1:+58413531 | MS.gene068940:CDS |
AAGACTGCATGAACAGCTAG+AGG | 0.664015 | 8.1:+58412962 | MS.gene068940:CDS |
AAAGCGTTCATGAAGTTCGA+CGG | 0.675081 | 8.1:-58411688 | None:intergenic |
TCACCACTGATCCAAAACCT+CGG | 0.679105 | 8.1:+58411655 | MS.gene068940:CDS |
GCGACCAGTCATAGAAGACG+AGG | 0.697663 | 8.1:-58412481 | None:intergenic |
GAGTCACCTTGAACACACAT+GGG | 0.714712 | 8.1:-58411621 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATTAAATTAAAATGC+AGG | - | chr8.1:58412762-58412781 | None:intergenic | 10.0% |
!! | TAAATAAATTAAGAATCAAA+AGG | - | chr8.1:58412533-58412552 | None:intergenic | 10.0% |
!! | TTAGAAAATAAAAATTCTTA+AGG | - | chr8.1:58412363-58412382 | None:intergenic | 10.0% |
!!! | TTTTCATCATTATTATTATT+AGG | - | chr8.1:58413714-58413733 | None:intergenic | 10.0% |
!! | AAAAGAAAGAAAAGAATAAA+AGG | - | chr8.1:58411761-58411780 | None:intergenic | 15.0% |
!! | ATAAAATCAAAGAACTTAAA+AGG | - | chr8.1:58412232-58412251 | None:intergenic | 15.0% |
!! | TAAAATCAAAGAACTTAAAA+GGG | - | chr8.1:58412231-58412250 | None:intergenic | 15.0% |
!!! | CAATAAAAAATTTTACGATT+TGG | + | chr8.1:58412796-58412815 | MS.gene068940:intron | 15.0% |
!!! | TTTTATTCTTTTCTTTCTTT+TGG | + | chr8.1:58411760-58411779 | MS.gene068940:intron | 15.0% |
!!! | TTTTGCATTAATAGAAATTT+AGG | + | chr8.1:58412256-58412275 | MS.gene068940:intron | 15.0% |
!!! | TTTTTGTTTTTGTTTTTTGA+GGG | - | chr8.1:58411908-58411927 | None:intergenic | 15.0% |
!!! | TTTTTTGTTTTTGTTTTTTG+AGG | - | chr8.1:58411909-58411928 | None:intergenic | 15.0% |
!! | AAAATACATGCAAAGTATAT+TGG | + | chr8.1:58413470-58413489 | MS.gene068940:CDS | 20.0% |
!! | AAATGAGGAAAATTATTTAG+AGG | - | chr8.1:58413603-58413622 | None:intergenic | 20.0% |
!! | CATATTATAATGAGAAACTT+TGG | + | chr8.1:58412835-58412854 | MS.gene068940:intron | 20.0% |
!! | TAAATTTCTTTACCTCATTT+AGG | + | chr8.1:58412163-58412182 | MS.gene068940:intron | 20.0% |
!! | TCATTATCATTCCAAATTAT+TGG | - | chr8.1:58413789-58413808 | None:intergenic | 20.0% |
!!! | AAAGTTAGTTTCTAATTTCT+AGG | + | chr8.1:58413113-58413132 | MS.gene068940:intron | 20.0% |
!!! | AATGATGAAAATTTGTTTGT+TGG | + | chr8.1:58413723-58413742 | MS.gene068940:CDS | 20.0% |
!!! | TTAATTTGTAGGTTTATTTG+TGG | + | chr8.1:58413406-58413425 | MS.gene068940:intron | 20.0% |
!!! | TTTCAATATTAGTTTACTTG+TGG | - | chr8.1:58412569-58412588 | None:intergenic | 20.0% |
! | AAACAAATTCTTTCATGTCA+GGG | - | chr8.1:58413578-58413597 | None:intergenic | 25.0% |
! | AAATAACAAAGTGATTGAGT+TGG | + | chr8.1:58413211-58413230 | MS.gene068940:intron | 25.0% |
! | AGTTAGTAGTTATTATATGC+AGG | - | chr8.1:58412718-58412737 | None:intergenic | 25.0% |
! | ATGTTAAGATCTTGAAAATG+AGG | - | chr8.1:58413618-58413637 | None:intergenic | 25.0% |
! | ATTCAATGAGCAATCTATTA+AGG | + | chr8.1:58412302-58412321 | MS.gene068940:CDS | 25.0% |
! | CATTAATAGAAATTTAGGCT+TGG | + | chr8.1:58412261-58412280 | MS.gene068940:intron | 25.0% |
! | GATTACTAAAATTTCTCTCT+AGG | + | chr8.1:58413338-58413357 | MS.gene068940:intron | 25.0% |
! | GGATTAAGACAAAAAATATG+TGG | + | chr8.1:58413359-58413378 | MS.gene068940:intron | 25.0% |
! | TAATCTATAGTTCAATCAGA+AGG | - | chr8.1:58413323-58413342 | None:intergenic | 25.0% |
! | TAATTTCAAAGGTGAATCAT+TGG | + | chr8.1:58413866-58413885 | MS.gene068940:CDS | 25.0% |
! | TTTCAAGAAAGATTTGAACT+CGG | - | chr8.1:58413276-58413295 | None:intergenic | 25.0% |
! | TTTCAAGATCTTAACATTTG+TGG | + | chr8.1:58413621-58413640 | MS.gene068940:CDS | 25.0% |
!! | AGACTAAAAGTATATAGAAG+AGG | - | chr8.1:58412606-58412625 | None:intergenic | 25.0% |
!! | ATTTGTTTGTTGGAAAGAAA+AGG | + | chr8.1:58413733-58413752 | MS.gene068940:CDS | 25.0% |
!! | GACTAAAAGTATATAGAAGA+GGG | - | chr8.1:58412605-58412624 | None:intergenic | 25.0% |
!! | TATATAGAGCTAGTGTTTTA+TGG | + | chr8.1:58413011-58413030 | MS.gene068940:intron | 25.0% |
!! | TTTGGAATGATAATGATCTT+AGG | + | chr8.1:58413793-58413812 | MS.gene068940:CDS | 25.0% |
!!! | AATGATTCACCTTTGAAATT+AGG | - | chr8.1:58413867-58413886 | None:intergenic | 25.0% |
!!! | TTTTGTTTTCATGACAGTTT+CGG | + | chr8.1:58412431-58412450 | MS.gene068940:intron | 25.0% |
AAAAACAATCATGAGGGTTA+TGG | + | chr8.1:58412068-58412087 | MS.gene068940:CDS | 30.0% | |
AAAACAATCATGAGGGTTAT+GGG | + | chr8.1:58412069-58412088 | MS.gene068940:CDS | 30.0% | |
AACCGTAACTAAAACTTTGT+TGG | + | chr8.1:58412902-58412921 | MS.gene068940:intron | 30.0% | |
AATGAGCAATCTATTAAGGA+TGG | + | chr8.1:58412306-58412325 | MS.gene068940:CDS | 30.0% | |
ACACTATACATATGATCTTG+TGG | - | chr8.1:58413037-58413056 | None:intergenic | 30.0% | |
AGATCATATGTATAGTGTTC+AGG | + | chr8.1:58413039-58413058 | MS.gene068940:intron | 30.0% | |
AGGCATTATAATTCCATCAA+GGG | - | chr8.1:58413694-58413713 | None:intergenic | 30.0% | |
ATCTTCATCAAAACATAGAG+AGG | + | chr8.1:58413664-58413683 | MS.gene068940:CDS | 30.0% | |
ATGAGAATTCATCATAGTTG+AGG | - | chr8.1:58411595-58411614 | None:intergenic | 30.0% | |
ATTATAATTCCATCAAGGGT+TGG | - | chr8.1:58413690-58413709 | None:intergenic | 30.0% | |
GAAACAAATTCTTTCATGTC+AGG | - | chr8.1:58413579-58413598 | None:intergenic | 30.0% | |
GATGATGTTCCTAATTTCAA+AGG | + | chr8.1:58413855-58413874 | MS.gene068940:CDS | 30.0% | |
TAGGCATTATAATTCCATCA+AGG | - | chr8.1:58413695-58413714 | None:intergenic | 30.0% | |
TCAAAGAACTTAAAAGGGAA+AGG | - | chr8.1:58412226-58412245 | None:intergenic | 30.0% | |
TCTACAAATTAACACACAAG+AGG | - | chr8.1:58412039-58412058 | None:intergenic | 30.0% | |
TCTTTCCACTTCCATTAAAA+GGG | - | chr8.1:58413764-58413783 | None:intergenic | 30.0% | |
TGAGAATTCATCATAGTTGA+GGG | - | chr8.1:58411594-58411613 | None:intergenic | 30.0% | |
TTAGTTACGGTTACATACAA+TGG | - | chr8.1:58412894-58412913 | None:intergenic | 30.0% | |
TTGAAATTAGGAACATCATC+AGG | - | chr8.1:58413855-58413874 | None:intergenic | 30.0% | |
TTTGAACTGCAAAGAAATAC+TGG | + | chr8.1:58412456-58412475 | MS.gene068940:CDS | 30.0% | |
! | AAAAGGACTAACCCTTTTAA+TGG | + | chr8.1:58413750-58413769 | MS.gene068940:CDS | 30.0% |
! | ACAAATTTCAAGGGTATGAA+TGG | + | chr8.1:58413540-58413559 | MS.gene068940:CDS | 30.0% |
! | ATAACCCTCATGATTGTTTT+TGG | - | chr8.1:58412069-58412088 | None:intergenic | 30.0% |
! | ATTAGTTTACTTGTGGTTGA+GGG | - | chr8.1:58412562-58412581 | None:intergenic | 30.0% |
! | TATTAGTTTACTTGTGGTTG+AGG | - | chr8.1:58412563-58412582 | None:intergenic | 30.0% |
!! | TTGGTTTGTAAACTTCACTA+AGG | + | chr8.1:58413230-58413249 | MS.gene068940:intron | 30.0% |
!!! | CACCAACAAAGTTTTAGTTA+CGG | - | chr8.1:58412907-58412926 | None:intergenic | 30.0% |
ATGCAGGAAAATACATGTTG+AGG | - | chr8.1:58412746-58412765 | None:intergenic | 35.0% | |
ATTGCTCATTGAATTCCTTG+TGG | - | chr8.1:58412296-58412315 | None:intergenic | 35.0% | |
CACAAAAGTGAACCTAAATG+AGG | - | chr8.1:58412178-58412197 | None:intergenic | 35.0% | |
CACTCCAAAAACAATCATGA+GGG | + | chr8.1:58412062-58412081 | MS.gene068940:CDS | 35.0% | |
CGTAACTAAAACTTTGTTGG+TGG | + | chr8.1:58412905-58412924 | MS.gene068940:intron | 35.0% | |
CTCTTTCCACTTCCATTAAA+AGG | - | chr8.1:58413765-58413784 | None:intergenic | 35.0% | |
GATCTTAGGCTTCATGATTT+GGG | + | chr8.1:58413807-58413826 | MS.gene068940:CDS | 35.0% | |
GTGCAAACTACATAACTAGA+AGG | + | chr8.1:58411782-58411801 | MS.gene068940:intron | 35.0% | |
GTGGAAAGAGTCCAATAATT+TGG | + | chr8.1:58413775-58413794 | MS.gene068940:CDS | 35.0% | |
TCTATTAAGGATGGTATGAG+AGG | + | chr8.1:58412315-58412334 | MS.gene068940:CDS | 35.0% | |
TGATCTTAGGCTTCATGATT+TGG | + | chr8.1:58413806-58413825 | MS.gene068940:CDS | 35.0% | |
TTGCTCATTGAATTCCTTGT+GGG | - | chr8.1:58412295-58412314 | None:intergenic | 35.0% | |
TTTGACCGACGTAAAATACT+CGG | - | chr8.1:58413194-58413213 | None:intergenic | 35.0% | |
TTTGTAGGTTTATTTGTGGC+AGG | + | chr8.1:58413410-58413429 | MS.gene068940:intron | 35.0% | |
TTTGTGTTCAAACCTGAAGA+TGG | - | chr8.1:58412128-58412147 | None:intergenic | 35.0% | |
! | ACTAACCCTTTTAATGGAAG+TGG | + | chr8.1:58413756-58413775 | MS.gene068940:CDS | 35.0% |
! | CTTTTCCGAGTATTTTACGT+CGG | + | chr8.1:58413186-58413205 | MS.gene068940:intron | 35.0% |
!! | GTTGGAAGTGCTTAATTTGT+AGG | + | chr8.1:58413395-58413414 | MS.gene068940:intron | 35.0% |
!! | TTCAAAAGCACCTTCAATTG+AGG | + | chr8.1:58413433-58413452 | MS.gene068940:CDS | 35.0% |
!!! | ACATTTTAGGATGCAAATGG+AGG | + | chr8.1:58412932-58412951 | MS.gene068940:intron | 35.0% |
!!! | GCAACATTTTAGGATGCAAA+TGG | + | chr8.1:58412929-58412948 | MS.gene068940:intron | 35.0% |
AAACCTGAAGATGGCTCTTA+AGG | - | chr8.1:58412119-58412138 | None:intergenic | 40.0% | |
AAAGCTTATCACACACTTGC+AGG | + | chr8.1:58413495-58413514 | MS.gene068940:CDS | 40.0% | |
AGCTGCAGCTACAAATTTCA+AGG | + | chr8.1:58413530-58413549 | MS.gene068940:CDS | 40.0% | |
AGGAGAAGATGAGTACTATC+AGG | - | chr8.1:58411741-58411760 | None:intergenic | 40.0% | |
ATCATAGTTGAGGGCTTCTT+TGG | - | chr8.1:58411585-58411604 | None:intergenic | 40.0% | |
ATGGCTCTTAAGGTGGTAAA+GGG | - | chr8.1:58412109-58412128 | None:intergenic | 40.0% | |
CCACTCCAAAAACAATCATG+AGG | + | chr8.1:58412061-58412080 | MS.gene068940:CDS | 40.0% | |
GCTGCAGCTACAAATTTCAA+GGG | + | chr8.1:58413531-58413550 | MS.gene068940:CDS | 40.0% | |
GTTATTCCAAGCTTCACAGA+TGG | - | chr8.1:58413960-58413979 | None:intergenic | 40.0% | |
TGCTCATTGAATTCCTTGTG+GGG | - | chr8.1:58412294-58412313 | None:intergenic | 40.0% | |
TTTGATCCATCTGTGAAGCT+TGG | + | chr8.1:58413951-58413970 | MS.gene068940:CDS | 40.0% | |
! | AAAGCGTTCATGAAGTTCGA+CGG | - | chr8.1:58411691-58411710 | None:intergenic | 40.0% |
! | AAGGGTATGAATGGAACTCA+AGG | + | chr8.1:58413549-58413568 | MS.gene068940:CDS | 40.0% |
!!! | CCTCATGATTGTTTTTGGAG+TGG | - | chr8.1:58412064-58412083 | None:intergenic | 40.0% |
!!! | TGTTGGTGGTGCAACATTTT+AGG | + | chr8.1:58412919-58412938 | MS.gene068940:intron | 40.0% |
AAGACTGCATGAACAGCTAG+AGG | + | chr8.1:58412962-58412981 | MS.gene068940:CDS | 45.0% | |
AGAGTCACCTTGAACACACA+TGG | - | chr8.1:58411625-58411644 | None:intergenic | 45.0% | |
ATAGTTGAGGGCTTCTTTGG+AGG | - | chr8.1:58411582-58411601 | None:intergenic | 45.0% | |
ATGAGGGTTATGGGTGTGAA+GGG | + | chr8.1:58412078-58412097 | MS.gene068940:CDS | 45.0% | |
ATGATCAATGCTGTTGCAGC+TGG | + | chr8.1:58413987-58414006 | MS.gene068940:CDS | 45.0% | |
ATGTGTGTTCAAGGTGACTC+TGG | + | chr8.1:58411624-58411643 | MS.gene068940:CDS | 45.0% | |
CAATTGAGGATTGAGGCTCA+AGG | + | chr8.1:58413447-58413466 | MS.gene068940:CDS | 45.0% | |
CACACTTGCAGGTGAAAACA+TGG | + | chr8.1:58413506-58413525 | MS.gene068940:CDS | 45.0% | |
GAGCCTCAATCCTCAATTGA+AGG | - | chr8.1:58413446-58413465 | None:intergenic | 45.0% | |
GAGTCACCTTGAACACACAT+GGG | - | chr8.1:58411624-58411643 | None:intergenic | 45.0% | |
GATAGACCCATGTGTGTTCA+AGG | + | chr8.1:58411615-58411634 | MS.gene068940:CDS | 45.0% | |
GATGGCTCTTAAGGTGGTAA+AGG | - | chr8.1:58412110-58412129 | None:intergenic | 45.0% | |
GCACCTTCAATTGAGGATTG+AGG | + | chr8.1:58413440-58413459 | MS.gene068940:CDS | 45.0% | |
GGTAGAAGCTCATCACCATT+TGG | + | chr8.1:58414008-58414027 | MS.gene068940:CDS | 45.0% | |
TAGTTGAGGGCTTCTTTGGA+GGG | - | chr8.1:58411581-58411600 | None:intergenic | 45.0% | |
TCACCACTGATCCAAAACCT+CGG | + | chr8.1:58411655-58411674 | MS.gene068940:CDS | 45.0% | |
TGTGGTGCAACTGCAAATGT+TGG | + | chr8.1:58413377-58413396 | MS.gene068940:intron | 45.0% | |
!! | GCTGCAACAGCATTGATCAT+AGG | - | chr8.1:58413987-58414006 | None:intergenic | 45.0% |
ATAGAGAGGCCAACCCTTGA+TGG | + | chr8.1:58413678-58413697 | MS.gene068940:CDS | 50.0% | |
ATCCAAAACCTCGGCTTCGA+TGG | + | chr8.1:58411664-58411683 | MS.gene068940:CDS | 50.0% | |
CATGAGGGTTATGGGTGTGA+AGG | + | chr8.1:58412077-58412096 | MS.gene068940:CDS | 50.0% | |
CCACCTTAAGAGCCATCTTC+AGG | + | chr8.1:58412113-58412132 | MS.gene068940:CDS | 50.0% | |
CCTGAAGATGGCTCTTAAGG+TGG | - | chr8.1:58412116-58412135 | None:intergenic | 50.0% | |
GTTGATGCTGTTGCTCAGCT+TGG | + | chr8.1:58411711-58411730 | MS.gene068940:CDS | 50.0% | |
TTGGATCAGTGGTGAGGACA+AGG | - | chr8.1:58411650-58411669 | None:intergenic | 50.0% | |
!!! | AAGCCGAGGTTTTGGATCAG+TGG | - | chr8.1:58411661-58411680 | None:intergenic | 50.0% |
!!! | GAGGTTTTGGATCAGTGGTG+AGG | - | chr8.1:58411656-58411675 | None:intergenic | 50.0% |
GATGCTGTTGCTCAGCTTGG+AGG | + | chr8.1:58411714-58411733 | MS.gene068940:CDS | 55.0% | |
GCGACCAGTCATAGAAGACG+AGG | - | chr8.1:58412484-58412503 | None:intergenic | 55.0% | |
GCTTGGAAAGCAACCCCACA+AGG | + | chr8.1:58412278-58412297 | MS.gene068940:CDS | 55.0% | |
GGCACCTCGTCTTCTATGAC+TGG | + | chr8.1:58412477-58412496 | MS.gene068940:CDS | 55.0% | |
! | GTCCATCGAAGCCGAGGTTT+TGG | - | chr8.1:58411669-58411688 | None:intergenic | 55.0% |
TCGACGGTCCATCGAAGCCG+AGG | - | chr8.1:58411675-58411694 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 58411564 | 58414034 | 58411564 | ID=MS.gene068940 |
chr8.1 | mRNA | 58411564 | 58414034 | 58411564 | ID=MS.gene068940.t1;Parent=MS.gene068940 |
chr8.1 | exon | 58411564 | 58411744 | 58411564 | ID=MS.gene068940.t1.exon1;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58411564 | 58411744 | 58411564 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
chr8.1 | exon | 58412058 | 58412134 | 58412058 | ID=MS.gene068940.t1.exon2;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58412058 | 58412134 | 58412058 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
chr8.1 | exon | 58412270 | 58412336 | 58412270 | ID=MS.gene068940.t1.exon3;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58412270 | 58412336 | 58412270 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
chr8.1 | exon | 58412448 | 58412514 | 58412448 | ID=MS.gene068940.t1.exon4;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58412448 | 58412514 | 58412448 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
chr8.1 | exon | 58412941 | 58412983 | 58412941 | ID=MS.gene068940.t1.exon5;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58412941 | 58412983 | 58412941 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
chr8.1 | exon | 58413432 | 58414034 | 58413432 | ID=MS.gene068940.t1.exon6;Parent=MS.gene068940.t1 |
chr8.1 | CDS | 58413432 | 58414034 | 58413432 | ID=cds.MS.gene068940.t1;Parent=MS.gene068940.t1 |
Gene Sequence |
Protein sequence |