Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069007.t1 | XP_024626741.1 | 86.9 | 283 | 25 | 2 | 1 | 283 | 1 | 271 | 2.50E-130 | 474.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069007.t1 | Q39266 | 37.1 | 124 | 63 | 3 | 69 | 185 | 40 | 155 | 5.5e-09 | 63.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069007.t1 | A0A396H587 | 57.9 | 280 | 98 | 6 | 20 | 283 | 1 | 276 | 8.6e-72 | 280.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene069007.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069007.t1 | MTR_3g011990 | 42.529 | 87 | 40 | 3 | 67 | 143 | 72 | 158 | 1.55e-11 | 63.9 |
| MS.gene069007.t1 | MTR_3g012010 | 49.254 | 67 | 27 | 1 | 66 | 125 | 71 | 137 | 2.52e-11 | 63.5 |
| MS.gene069007.t1 | MTR_4g128340 | 47.297 | 74 | 31 | 3 | 82 | 154 | 43 | 109 | 3.20e-11 | 61.2 |
| MS.gene069007.t1 | MTR_8g466760 | 43.590 | 78 | 28 | 3 | 77 | 143 | 86 | 158 | 6.63e-11 | 62.0 |
| MS.gene069007.t1 | MTR_5g008280 | 39.000 | 100 | 50 | 3 | 88 | 184 | 48 | 139 | 7.01e-11 | 62.4 |
| MS.gene069007.t1 | MTR_3g011970 | 51.613 | 62 | 24 | 2 | 86 | 147 | 98 | 153 | 7.14e-11 | 62.0 |
| MS.gene069007.t1 | MTR_7g022980 | 36.364 | 110 | 63 | 3 | 88 | 195 | 68 | 172 | 8.71e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069007.t1 | AT1G24625 | 33.784 | 148 | 79 | 5 | 71 | 211 | 42 | 177 | 4.84e-13 | 67.0 |
| MS.gene069007.t1 | AT5G57520 | 52.778 | 72 | 21 | 3 | 88 | 156 | 52 | 113 | 6.71e-13 | 65.5 |
| MS.gene069007.t1 | AT5G10970 | 41.379 | 116 | 47 | 6 | 63 | 170 | 84 | 186 | 1.85e-12 | 66.6 |
| MS.gene069007.t1 | AT5G25160 | 41.284 | 109 | 44 | 7 | 82 | 190 | 57 | 145 | 2.00e-11 | 63.2 |
| MS.gene069007.t1 | AT1G80730 | 68.293 | 41 | 11 | 1 | 78 | 118 | 60 | 98 | 7.06e-11 | 61.2 |
Find 85 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.2:-33655141 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.184623 | 7.2:-33655861 | None:intergenic |
| TGACCAATACCTTTCCTTCT+TGG | 0.214854 | 7.2:+33655586 | MS.gene069007:CDS |
| CCCCAAGCAATACCACAATT+TGG | 0.215872 | 7.2:+33655696 | MS.gene069007:CDS |
| TCTTGGCTCGGTTCACCTTA+TGG | 0.231125 | 7.2:+33655603 | MS.gene069007:CDS |
| TGGTGTGAGTGCCAAGTCTT+AGG | 0.231168 | 7.2:-33655221 | None:intergenic |
| GGTATTGCTTGGGGTGAATT+TGG | 0.237787 | 7.2:-33655687 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.286115 | 7.2:-33655765 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.2:-33655392 | None:intergenic |
| CCCAAATTGTGGTATTGCTT+GGG | 0.320868 | 7.2:-33655697 | None:intergenic |
| CGGGTTGCAAGGAGTGTATT+TGG | 0.331776 | 7.2:-33655648 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+GGG | 0.338136 | 7.2:+33655771 | MS.gene069007:CDS |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.2:+33655765 | MS.gene069007:CDS |
| AAGGTCAAACACTTTGGGTT+TGG | 0.344659 | 7.2:+33655770 | MS.gene069007:CDS |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.360530 | 7.2:-33655241 | None:intergenic |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.364677 | 7.2:-33655759 | None:intergenic |
| GTCACATATTGGACGCCAAT+TGG | 0.375665 | 7.2:-33655567 | None:intergenic |
| TAGTGAATAGAGCTTGAAAA+TGG | 0.380905 | 7.2:-33655504 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.2:+33655363 | MS.gene069007:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.2:+33655110 | MS.gene069007:CDS |
| TCCCAAATTGTGGTATTGCT+TGG | 0.387678 | 7.2:-33655698 | None:intergenic |
| TCCACCGTTCTCCAAGGGTT+TGG | 0.389944 | 7.2:-33655253 | None:intergenic |
| GAAAGGTATTGGTCACATAT+TGG | 0.392979 | 7.2:-33655578 | None:intergenic |
| CACCTTATGGTGGCTATGGA+GGG | 0.398816 | 7.2:+33655616 | MS.gene069007:CDS |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.2:+33655863 | MS.gene069007:CDS |
| CCCAAGCAATACCACAATTT+GGG | 0.408128 | 7.2:+33655697 | MS.gene069007:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.2:+33655764 | MS.gene069007:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.2:-33655843 | None:intergenic |
| ATAGAGCTTGAAAATGGATA+AGG | 0.424890 | 7.2:-33655498 | None:intergenic |
| ACCACTTTCTGCTCAGGTAA+AGG | 0.442903 | 7.2:-33655309 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445268 | 7.2:+33655510 | MS.gene069007:CDS |
| TTGGCATTTGCATCACATAC+CGG | 0.471216 | 7.2:-33655668 | None:intergenic |
| GTTCTCCAAGGGTTTGGAAG+TGG | 0.473154 | 7.2:-33655247 | None:intergenic |
| TCACATATTGGACGCCAATT+GGG | 0.475144 | 7.2:-33655566 | None:intergenic |
| TCACCTTATGGTGGCTATGG+AGG | 0.475493 | 7.2:+33655615 | MS.gene069007:CDS |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.2:+33655366 | MS.gene069007:CDS |
| TAGAGCTTGAAAATGGATAA+GGG | 0.481590 | 7.2:-33655497 | None:intergenic |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.2:+33655552 | MS.gene069007:CDS |
| GGTGTGAGTGCCAAGTCTTA+GGG | 0.491546 | 7.2:-33655220 | None:intergenic |
| CTTGAAAATGGATAAGGGTA+TGG | 0.493945 | 7.2:-33655492 | None:intergenic |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.2:+33655437 | MS.gene069007:CDS |
| GGTTCACCTTATGGTGGCTA+TGG | 0.502207 | 7.2:+33655612 | MS.gene069007:CDS |
| AACTCTACCACTTTCTGCTC+AGG | 0.502340 | 7.2:-33655315 | None:intergenic |
| AGTTGATGATGAGGAAACAT+TGG | 0.505069 | 7.2:-33655892 | None:intergenic |
| AATACCTTTCCTTCTTGGCT+CGG | 0.506841 | 7.2:+33655591 | MS.gene069007:CDS |
| TGGGGTGGATGTCAAAATGC+TGG | 0.515154 | 7.2:+33655732 | MS.gene069007:CDS |
| ATTATTAGATCTAAACCATA+GGG | 0.518656 | 7.2:-33655466 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.519689 | 7.2:+33655242 | MS.gene069007:CDS |
| GTTGATGATGAGGAAACATT+GGG | 0.520842 | 7.2:-33655891 | None:intergenic |
| GAGCCAAGAAGGAAAGGTAT+TGG | 0.520905 | 7.2:-33655589 | None:intergenic |
| TGATCAATGAAATTTCTTCG+AGG | 0.520979 | 7.2:-33655801 | None:intergenic |
| ACCCCTCCATAGCCACCATA+AGG | 0.522093 | 7.2:-33655618 | None:intergenic |
| GATTATTAGATCTAAACCAT+AGG | 0.529631 | 7.2:-33655467 | None:intergenic |
| TGGCATTTGCATCACATACC+GGG | 0.531856 | 7.2:-33655667 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.2:-33655091 | None:intergenic |
| ACCTTATGGTGGCTATGGAG+GGG | 0.537456 | 7.2:+33655617 | MS.gene069007:CDS |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.2:+33655146 | MS.gene069007:CDS |
| TCAACATCAGATTCAGAGGT+TGG | 0.549087 | 7.2:-33655186 | None:intergenic |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.2:-33655533 | None:intergenic |
| AACCTCTGAATCTGATGTTG+AGG | 0.555993 | 7.2:+33655188 | MS.gene069007:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.2:-33655367 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.2:+33655428 | MS.gene069007:CDS |
| CAAATACACTCCTTGCAACC+CGG | 0.559377 | 7.2:+33655649 | MS.gene069007:CDS |
| TGAATGTCCACCGTTCTCCA+AGG | 0.561681 | 7.2:-33655259 | None:intergenic |
| GCATCACATACCGGGTTGCA+AGG | 0.562451 | 7.2:-33655659 | None:intergenic |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.2:+33655451 | MS.gene069007:CDS |
| GAATGTCCACCGTTCTCCAA+GGG | 0.565536 | 7.2:-33655258 | None:intergenic |
| ACCTTTACCTGAGCAGAAAG+TGG | 0.574184 | 7.2:+33655308 | MS.gene069007:CDS |
| TAAGGTGAACCGAGCCAAGA+AGG | 0.575815 | 7.2:-33655600 | None:intergenic |
| ATCCTCAACATCAGATTCAG+AGG | 0.595365 | 7.2:-33655190 | None:intergenic |
| TGAACCGAGCCAAGAAGGAA+AGG | 0.596165 | 7.2:-33655595 | None:intergenic |
| ATGTCTGAGAGAATTTCCAT+TGG | 0.596820 | 7.2:+33655075 | MS.gene069007:CDS |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.2:+33655852 | MS.gene069007:CDS |
| AAATTAGTCATCCCAAATTG+TGG | 0.602452 | 7.2:-33655708 | None:intergenic |
| AATTTCCATTGGAAATGATG+AGG | 0.604935 | 7.2:+33655086 | MS.gene069007:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.2:+33655116 | MS.gene069007:CDS |
| GATTTACTAACCCTAAGACT+TGG | 0.606458 | 7.2:+33655210 | MS.gene069007:CDS |
| CCAAATTGTGGTATTGCTTG+GGG | 0.608715 | 7.2:-33655696 | None:intergenic |
| ACTTCCAAACCCTTGGAGAA+CGG | 0.610472 | 7.2:+33655249 | MS.gene069007:CDS |
| TGGCTCGGTTCACCTTATGG+TGG | 0.610898 | 7.2:+33655606 | MS.gene069007:CDS |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.2:+33655113 | MS.gene069007:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.2:-33655545 | None:intergenic |
| CGTTGATTGAGTTGATGATG+AGG | 0.655857 | 7.2:-33655901 | None:intergenic |
| TCCAAACCCTTGGAGAACGG+TGG | 0.656704 | 7.2:+33655252 | MS.gene069007:CDS |
| CTGGATTGCCAATTCCACAA+AGG | 0.690145 | 7.2:+33655751 | MS.gene069007:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.2:33655421-33655440 | MS.gene069007:CDS | 15.0% |
| !! | ATTATTAGATCTAAACCATA+GGG | - | chr7.2:33655469-33655488 | None:intergenic | 20.0% |
| ! | GATTATTAGATCTAAACCAT+AGG | - | chr7.2:33655470-33655489 | None:intergenic | 25.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.2:33655410-33655429 | MS.gene069007:CDS | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.2:33655712-33655731 | MS.gene069007:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.2:33655713-33655732 | MS.gene069007:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.2:33655144-33655163 | None:intergenic | 25.0% |
| AAATTAGTCATCCCAAATTG+TGG | - | chr7.2:33655711-33655730 | None:intergenic | 30.0% | |
| AATTTCCATTGGAAATGATG+AGG | + | chr7.2:33655086-33655105 | MS.gene069007:CDS | 30.0% | |
| ATAGAGCTTGAAAATGGATA+AGG | - | chr7.2:33655501-33655520 | None:intergenic | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.2:33655146-33655165 | MS.gene069007:CDS | 30.0% | |
| TAGAGCTTGAAAATGGATAA+GGG | - | chr7.2:33655500-33655519 | None:intergenic | 30.0% | |
| TAGTGAATAGAGCTTGAAAA+TGG | - | chr7.2:33655507-33655526 | None:intergenic | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.2:33655864-33655883 | None:intergenic | 30.0% | |
| TGATCAATGAAATTTCTTCG+AGG | - | chr7.2:33655804-33655823 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.2:33655846-33655865 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.2:33655863-33655882 | MS.gene069007:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.2:33655714-33655733 | MS.gene069007:CDS | 30.0% |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.2:33655428-33655447 | MS.gene069007:CDS | 35.0% | |
| ATGTCTGAGAGAATTTCCAT+TGG | + | chr7.2:33655075-33655094 | MS.gene069007:CDS | 35.0% | |
| CTTGAAAATGGATAAGGGTA+TGG | - | chr7.2:33655495-33655514 | None:intergenic | 35.0% | |
| GATTTACTAACCCTAAGACT+TGG | + | chr7.2:33655210-33655229 | MS.gene069007:CDS | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.2:33655110-33655129 | MS.gene069007:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.2:33655536-33655555 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.2:33655510-33655529 | MS.gene069007:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.2:33655094-33655113 | None:intergenic | 35.0% | |
| !! | AGTTGATGATGAGGAAACAT+TGG | - | chr7.2:33655895-33655914 | None:intergenic | 35.0% |
| !! | GAAAGGTATTGGTCACATAT+TGG | - | chr7.2:33655581-33655600 | None:intergenic | 35.0% |
| !! | GTTGATGATGAGGAAACATT+GGG | - | chr7.2:33655894-33655913 | None:intergenic | 35.0% |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.2:33655113-33655132 | MS.gene069007:CDS | 40.0% | |
| AACCTCTGAATCTGATGTTG+AGG | + | chr7.2:33655188-33655207 | MS.gene069007:CDS | 40.0% | |
| AATACCTTTCCTTCTTGGCT+CGG | + | chr7.2:33655591-33655610 | MS.gene069007:CDS | 40.0% | |
| ATCCTCAACATCAGATTCAG+AGG | - | chr7.2:33655193-33655212 | None:intergenic | 40.0% | |
| CCAAATTGTGGTATTGCTTG+GGG | - | chr7.2:33655699-33655718 | None:intergenic | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.2:33655765-33655784 | MS.gene069007:CDS | 40.0% | |
| CCCAAATTGTGGTATTGCTT+GGG | - | chr7.2:33655700-33655719 | None:intergenic | 40.0% | |
| CCCAAGCAATACCACAATTT+GGG | + | chr7.2:33655697-33655716 | MS.gene069007:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.2:33655762-33655781 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.2:33655437-33655456 | MS.gene069007:CDS | 40.0% | |
| TCAACATCAGATTCAGAGGT+TGG | - | chr7.2:33655189-33655208 | None:intergenic | 40.0% | |
| TCACATATTGGACGCCAATT+GGG | - | chr7.2:33655569-33655588 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.2:33655764-33655783 | MS.gene069007:CDS | 40.0% | |
| TCCCAAATTGTGGTATTGCT+TGG | - | chr7.2:33655701-33655720 | None:intergenic | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.2:33655852-33655871 | MS.gene069007:CDS | 40.0% | |
| TGACCAATACCTTTCCTTCT+TGG | + | chr7.2:33655586-33655605 | MS.gene069007:CDS | 40.0% | |
| TTGGCATTTGCATCACATAC+CGG | - | chr7.2:33655671-33655690 | None:intergenic | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.2:33655451-33655470 | MS.gene069007:CDS | 40.0% |
| ! | AAGGTCAAACACTTTGGGTT+TGG | + | chr7.2:33655770-33655789 | MS.gene069007:CDS | 40.0% |
| ! | AGGTCAAACACTTTGGGTTT+GGG | + | chr7.2:33655771-33655790 | MS.gene069007:CDS | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.2:33655395-33655414 | None:intergenic | 40.0% |
| !! | CGTTGATTGAGTTGATGATG+AGG | - | chr7.2:33655904-33655923 | None:intergenic | 40.0% |
| AACTCTACCACTTTCTGCTC+AGG | - | chr7.2:33655318-33655337 | None:intergenic | 45.0% | |
| ACCACTTTCTGCTCAGGTAA+AGG | - | chr7.2:33655312-33655331 | None:intergenic | 45.0% | |
| ACCTTTACCTGAGCAGAAAG+TGG | + | chr7.2:33655308-33655327 | MS.gene069007:CDS | 45.0% | |
| ACTTCCAAACCCTTGGAGAA+CGG | + | chr7.2:33655249-33655268 | MS.gene069007:CDS | 45.0% | |
| CAAATACACTCCTTGCAACC+CGG | + | chr7.2:33655649-33655668 | MS.gene069007:CDS | 45.0% | |
| CCCCAAGCAATACCACAATT+TGG | + | chr7.2:33655696-33655715 | MS.gene069007:CDS | 45.0% | |
| CTGGATTGCCAATTCCACAA+AGG | + | chr7.2:33655751-33655770 | MS.gene069007:CDS | 45.0% | |
| GGTATTGCTTGGGGTGAATT+TGG | - | chr7.2:33655690-33655709 | None:intergenic | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.2:33655548-33655567 | None:intergenic | 45.0% | |
| GTCACATATTGGACGCCAAT+TGG | - | chr7.2:33655570-33655589 | None:intergenic | 45.0% | |
| TGGCATTTGCATCACATACC+GGG | - | chr7.2:33655670-33655689 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.2:33655363-33655382 | MS.gene069007:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.2:33655768-33655787 | None:intergenic | 45.0% |
| ! | GAGCCAAGAAGGAAAGGTAT+TGG | - | chr7.2:33655592-33655611 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.2:33655552-33655571 | MS.gene069007:CDS | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.2:33655717-33655736 | MS.gene069007:CDS | 45.0% |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.2:33655370-33655389 | None:intergenic | 50.0% | |
| ACCTTATGGTGGCTATGGAG+GGG | + | chr7.2:33655617-33655636 | MS.gene069007:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.2:33655242-33655261 | MS.gene069007:CDS | 50.0% | |
| CACCTTATGGTGGCTATGGA+GGG | + | chr7.2:33655616-33655635 | MS.gene069007:CDS | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.2:33655116-33655135 | MS.gene069007:CDS | 50.0% | |
| GAATGTCCACCGTTCTCCAA+GGG | - | chr7.2:33655261-33655280 | None:intergenic | 50.0% | |
| GGTGTGAGTGCCAAGTCTTA+GGG | - | chr7.2:33655223-33655242 | None:intergenic | 50.0% | |
| GGTTCACCTTATGGTGGCTA+TGG | + | chr7.2:33655612-33655631 | MS.gene069007:CDS | 50.0% | |
| GTTCTCCAAGGGTTTGGAAG+TGG | - | chr7.2:33655250-33655269 | None:intergenic | 50.0% | |
| TAAGGTGAACCGAGCCAAGA+AGG | - | chr7.2:33655603-33655622 | None:intergenic | 50.0% | |
| TCACCTTATGGTGGCTATGG+AGG | + | chr7.2:33655615-33655634 | MS.gene069007:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.2:33655366-33655385 | MS.gene069007:CDS | 50.0% | |
| TGAACCGAGCCAAGAAGGAA+AGG | - | chr7.2:33655598-33655617 | None:intergenic | 50.0% | |
| TGAATGTCCACCGTTCTCCA+AGG | - | chr7.2:33655262-33655281 | None:intergenic | 50.0% | |
| TGGGGTGGATGTCAAAATGC+TGG | + | chr7.2:33655732-33655751 | MS.gene069007:CDS | 50.0% | |
| TGGTGTGAGTGCCAAGTCTT+AGG | - | chr7.2:33655224-33655243 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.2:33655244-33655263 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.2:33655119-33655138 | None:intergenic | 50.0% |
| ! | CGGGTTGCAAGGAGTGTATT+TGG | - | chr7.2:33655651-33655670 | None:intergenic | 50.0% |
| !! | TCTTGGCTCGGTTCACCTTA+TGG | + | chr7.2:33655603-33655622 | MS.gene069007:CDS | 50.0% |
| ACCCCTCCATAGCCACCATA+AGG | - | chr7.2:33655621-33655640 | None:intergenic | 55.0% | |
| GCATCACATACCGGGTTGCA+AGG | - | chr7.2:33655662-33655681 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGAGAACGG+TGG | + | chr7.2:33655252-33655271 | MS.gene069007:CDS | 55.0% | |
| TCCACCGTTCTCCAAGGGTT+TGG | - | chr7.2:33655256-33655275 | None:intergenic | 55.0% | |
| !! | TGGCTCGGTTCACCTTATGG+TGG | + | chr7.2:33655606-33655625 | MS.gene069007:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 33655075 | 33655926 | 33655075 | ID=MS.gene069007 |
| chr7.2 | mRNA | 33655075 | 33655926 | 33655075 | ID=MS.gene069007.t1;Parent=MS.gene069007 |
| chr7.2 | exon | 33655075 | 33655926 | 33655075 | ID=MS.gene069007.t1.exon1;Parent=MS.gene069007.t1 |
| chr7.2 | CDS | 33655075 | 33655926 | 33655075 | ID=cds.MS.gene069007.t1;Parent=MS.gene069007.t1 |
| Gene Sequence |
| Protein sequence |