Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069014.t1 | XP_003623338.1 | 92.8 | 458 | 28 | 3 | 26 | 482 | 78 | 531 | 1.30E-235 | 825.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069014.t1 | G7KSD5 | 92.8 | 458 | 28 | 3 | 26 | 482 | 78 | 531 | 9.4e-236 | 825.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene069014.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069014.t1 | MTR_7g069740 | 91.718 | 483 | 35 | 3 | 1 | 482 | 53 | 531 | 0.0 | 880 |
| MS.gene069014.t1 | MTR_3g072710 | 24.465 | 327 | 195 | 13 | 165 | 459 | 115 | 421 | 2.35e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 79 sgRNAs with CRISPR-Local
Find 113 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGACATAATTGATTAT+TGG | 0.190898 | 7.2:-33758034 | MS.gene069014:CDS |
| ACCAATTTGTGGACTCAAAA+TGG | 0.208342 | 7.2:+33758622 | None:intergenic |
| TGAAATTGACATCAATTAAA+TGG | 0.209268 | 7.2:-33757950 | MS.gene069014:CDS |
| TTTCTTCATCAATTGGAAAT+TGG | 0.210829 | 7.2:+33758687 | None:intergenic |
| AACTCCCTTCACTTTCTTCT+TGG | 0.260798 | 7.2:+33758579 | None:intergenic |
| TACTCTGCCACAAGAAAATA+TGG | 0.271341 | 7.2:-33758378 | MS.gene069014:CDS |
| ATTGCAACAAAGCTTTATAA+TGG | 0.275966 | 7.2:+33757559 | None:intergenic |
| ATCAAGGGAATTATTACTTT+TGG | 0.281766 | 7.2:-33757651 | MS.gene069014:CDS |
| GACATAATTGATTATTGGTT+TGG | 0.287363 | 7.2:-33758029 | MS.gene069014:CDS |
| GATGCCAAAAGGGAACTTTA+TGG | 0.310327 | 7.2:-33757891 | MS.gene069014:CDS |
| CTTGTATATCTTCTCTTGAT+TGG | 0.318337 | 7.2:-33757467 | MS.gene069014:CDS |
| GATATGATCATTGGTGAATA+TGG | 0.332452 | 7.2:+33758709 | None:intergenic |
| TCCAAGGTTTCTTCATCAAT+TGG | 0.335882 | 7.2:+33758680 | None:intergenic |
| CTTGGAACTTCCATCTCTAA+TGG | 0.352756 | 7.2:-33758663 | MS.gene069014:CDS |
| ATGAAAATTCTGAATGTGTT+TGG | 0.359147 | 7.2:-33757923 | MS.gene069014:CDS |
| GAACATAGTCATCATCAATA+TGG | 0.362230 | 7.2:+33758825 | None:intergenic |
| TCTTGTATGCCTCGCCTTTG+AGG | 0.374060 | 7.2:+33758168 | None:intergenic |
| ATACCCATAAAGTTCCCTTT+TGG | 0.377431 | 7.2:+33757887 | None:intergenic |
| AATGATAGGTCTTCCACATA+TGG | 0.384690 | 7.2:-33757748 | MS.gene069014:CDS |
| CCTCGGAGACAGTTGTAAAA+TGG | 0.387068 | 7.2:-33758507 | MS.gene069014:CDS |
| AGTGAGTCTTCCACACTTGA+TGG | 0.390562 | 7.2:-33758342 | MS.gene069014:CDS |
| GAAATTGAAGGTAGAGGAAA+AGG | 0.406350 | 7.2:-33757847 | MS.gene069014:CDS |
| TCTTGAATATTACCAATTTG+TGG | 0.407532 | 7.2:+33758611 | None:intergenic |
| CTCTTGATTGGTTACAAACA+TGG | 0.411194 | 7.2:-33757455 | MS.gene069014:CDS |
| TCTGATTTCATTGAAAGTGT+TGG | 0.420317 | 7.2:+33758425 | None:intergenic |
| TTGGCTTTCAAGTTAATGAT+AGG | 0.426926 | 7.2:-33757762 | MS.gene069014:CDS |
| GAAGGTAGAGGAAAAGGAAT+TGG | 0.435590 | 7.2:-33757841 | MS.gene069014:CDS |
| ATGCCAAAAGGGAACTTTAT+GGG | 0.439318 | 7.2:-33757890 | MS.gene069014:CDS |
| ATTGATTATTGGTTTGGAAA+TGG | 0.443553 | 7.2:-33758023 | MS.gene069014:CDS |
| TCCAATTGATGAAGAAACCT+TGG | 0.445970 | 7.2:-33758681 | MS.gene069014:CDS |
| TGGAAATTGGATATGATCAT+TGG | 0.449728 | 7.2:+33758700 | None:intergenic |
| GATCAAGAACTATGGTATCA+AGG | 0.453234 | 7.2:-33757667 | MS.gene069014:CDS |
| AGTGATGGCTATCATCATAA+AGG | 0.457503 | 7.2:-33757420 | MS.gene069014:CDS |
| GAGGATTTGATCAAGAACTA+TGG | 0.460555 | 7.2:-33757675 | MS.gene069014:CDS |
| ATCAAAATAATGAACGAAAC+GGG | 0.464863 | 7.2:-33757801 | MS.gene069014:CDS |
| GTCTCAAGAGAGTCACCAAT+TGG | 0.467270 | 7.2:+33758236 | None:intergenic |
| GAAACAGCCTCCAAGAGAAA+AGG | 0.477495 | 7.2:+33757990 | None:intergenic |
| TGCATGTGAAGTGTTGTTTG+TGG | 0.478913 | 7.2:-33757493 | MS.gene069014:CDS |
| TGTTGGACTCCATGCATCAC+AGG | 0.496115 | 7.2:+33758442 | None:intergenic |
| GCTCAAGAAGTGACAAATCA+TGG | 0.497130 | 7.2:-33758197 | MS.gene069014:CDS |
| GATCAAAATAATGAACGAAA+CGG | 0.497362 | 7.2:-33757802 | MS.gene069014:CDS |
| CTTCTAACCATTCCCATATG+TGG | 0.507260 | 7.2:+33757735 | None:intergenic |
| TCATCCATGATGATGCCATA+TGG | 0.509020 | 7.2:+33758803 | None:intergenic |
| CATTAGAGATGGAAGTTCCA+AGG | 0.509956 | 7.2:+33758664 | None:intergenic |
| ATCATGTGGTTTGAAATTGA+AGG | 0.512511 | 7.2:-33757859 | MS.gene069014:CDS |
| GATGATGACTATGTTCCATA+TGG | 0.514828 | 7.2:-33758818 | MS.gene069014:CDS |
| CATGGTGAAGCCTTGGAGAA+AGG | 0.516575 | 7.2:-33758314 | MS.gene069014:CDS |
| GGAAGCACATGGTGAAGCCT+TGG | 0.523810 | 7.2:-33758321 | MS.gene069014:CDS |
| TGGTTTGAAATTGAAGGTAG+AGG | 0.525487 | 7.2:-33757853 | MS.gene069014:CDS |
| TAAAGGGAAATCATCATAAG+TGG | 0.526885 | 7.2:+33758475 | None:intergenic |
| GGTTTGGAAATGGTGTTCAA+TGG | 0.527955 | 7.2:-33758013 | MS.gene069014:CDS |
| ATGATAGGTCTTCCACATAT+GGG | 0.529724 | 7.2:-33757747 | MS.gene069014:CDS |
| ATCAAGAACTATGGTATCAA+GGG | 0.539287 | 7.2:-33757666 | MS.gene069014:CDS |
| GAAATCATCATAAGTGGCAC+TGG | 0.544984 | 7.2:+33758481 | None:intergenic |
| GATTCTAATTCCATTAGAGA+TGG | 0.545913 | 7.2:+33758653 | None:intergenic |
| AAAATTCTCCCTGTGATGCA+TGG | 0.552151 | 7.2:-33758451 | MS.gene069014:CDS |
| GATTTGAACTATACCCTTCG+AGG | 0.557019 | 7.2:+33758531 | None:intergenic |
| TATGGGTATGCTAAATCATG+TGG | 0.565575 | 7.2:-33757873 | MS.gene069014:CDS |
| TGTTCCATATGGCATCATCA+TGG | 0.566239 | 7.2:-33758807 | MS.gene069014:CDS |
| TCTTGATTGGTTACAAACAT+GGG | 0.569487 | 7.2:-33757454 | MS.gene069014:CDS |
| ATAGTTCTTGATCAAATCCT+CGG | 0.572634 | 7.2:+33757677 | None:intergenic |
| TCAAGTGTGGAAGACTCACT+TGG | 0.579458 | 7.2:+33758345 | None:intergenic |
| CTATACCCTTCGAGGACATG+TGG | 0.581600 | 7.2:+33758539 | None:intergenic |
| CCATATGGCATCATCATGGA+TGG | 0.582147 | 7.2:-33758848 | None:intergenic |
| CAATCAAGAGAAGATATACA+AGG | 0.583066 | 7.2:+33757468 | None:intergenic |
| AGGTCTTCCACATATGGGAA+TGG | 0.588806 | 7.2:-33757742 | MS.gene069014:CDS |
| GAATACCAAGAAGAAAGTGA+AGG | 0.607663 | 7.2:-33758584 | MS.gene069014:CDS |
| ATCATCATAAGTGGCACTGG+CGG | 0.608048 | 7.2:+33758484 | None:intergenic |
| TGGGAAGAGATGAAAAGTGA+TGG | 0.608114 | 7.2:-33757435 | MS.gene069014:CDS |
| AATACCAAGAAGAAAGTGAA+GGG | 0.608570 | 7.2:-33758583 | MS.gene069014:CDS |
| TTCATCACAATCTTCTAACA+TGG | 0.616759 | 7.2:+33758055 | None:intergenic |
| CCATGTGCTTCCATCAAGTG+TGG | 0.618160 | 7.2:+33758332 | None:intergenic |
| GTTGGACTCCATGCATCACA+GGG | 0.638138 | 7.2:+33758443 | None:intergenic |
| AAAATAATGAACGAAACGGG+TGG | 0.646793 | 7.2:-33757798 | MS.gene069014:CDS |
| GGGTATAGTTCAAATCCCCT+CGG | 0.648026 | 7.2:-33758524 | MS.gene069014:CDS |
| CCACACTTGATGGAAGCACA+TGG | 0.654957 | 7.2:-33758332 | MS.gene069014:CDS |
| AATCATGGAGAATACCTCAA+AGG | 0.661739 | 7.2:-33758182 | MS.gene069014:CDS |
| AAGAGAGTCACCAATTGGAG+TGG | 0.663623 | 7.2:+33758241 | None:intergenic |
| TGGAGAATACCTCAAAGGCG+AGG | 0.686092 | 7.2:-33758177 | MS.gene069014:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGACATAATTGATTAT+TGG | - | chr7.2:33758206-33758225 | MS.gene069014:CDS | 15.0% |
| !! | TGAAATTGACATCAATTAAA+TGG | - | chr7.2:33758290-33758309 | MS.gene069014:CDS | 20.0% |
| !!! | AATTTCATGTCATTTTTTGA+AGG | - | chr7.2:33758649-33758668 | MS.gene069014:CDS | 20.0% |
| !!! | ATTTCATGTCATTTTTTGAA+GGG | - | chr7.2:33758650-33758669 | MS.gene069014:CDS | 20.0% |
| !!! | CTTTTAAGGTATTTTATCAA+GGG | - | chr7.2:33758107-33758126 | MS.gene069014:CDS | 20.0% |
| ! | ATCAAAATAATGAACGAAAC+GGG | - | chr7.2:33758439-33758458 | MS.gene069014:CDS | 25.0% |
| ! | ATGAAAATTCTGAATGTGTT+TGG | - | chr7.2:33758317-33758336 | MS.gene069014:CDS | 25.0% |
| ! | GATCAAAATAATGAACGAAA+CGG | - | chr7.2:33758438-33758457 | MS.gene069014:CDS | 25.0% |
| ! | TCTTGAATATTACCAATTTG+TGG | + | chr7.2:33757632-33757651 | None:intergenic | 25.0% |
| ! | TTTCTTCATCAATTGGAAAT+TGG | + | chr7.2:33757556-33757575 | None:intergenic | 25.0% |
| !! | AAATGCTTATGAGTTTTTGA+AGG | - | chr7.2:33758537-33758556 | MS.gene069014:CDS | 25.0% |
| !! | ATCAAGGGAATTATTACTTT+TGG | - | chr7.2:33758589-33758608 | MS.gene069014:CDS | 25.0% |
| !! | ATTGCAACAAAGCTTTATAA+TGG | + | chr7.2:33758684-33758703 | None:intergenic | 25.0% |
| !! | GACATAATTGATTATTGGTT+TGG | - | chr7.2:33758211-33758230 | MS.gene069014:CDS | 25.0% |
| !! | TCAATTTCCATATTTTCTTG+TGG | + | chr7.2:33757872-33757891 | None:intergenic | 25.0% |
| !!! | ATTGATTATTGGTTTGGAAA+TGG | - | chr7.2:33758217-33758236 | MS.gene069014:CDS | 25.0% |
| !!! | GCTTTTAAGGTATTTTATCA+AGG | - | chr7.2:33758106-33758125 | MS.gene069014:CDS | 25.0% |
| AATACCAAGAAGAAAGTGAA+GGG | - | chr7.2:33757657-33757676 | MS.gene069014:CDS | 30.0% | |
| ATAGTTCTTGATCAAATCCT+CGG | + | chr7.2:33758566-33758585 | None:intergenic | 30.0% | |
| ATCAAGAACTATGGTATCAA+GGG | - | chr7.2:33758574-33758593 | MS.gene069014:CDS | 30.0% | |
| CAATCAAGAGAAGATATACA+AGG | + | chr7.2:33758775-33758794 | None:intergenic | 30.0% | |
| CTTGTATATCTTCTCTTGAT+TGG | - | chr7.2:33758773-33758792 | MS.gene069014:CDS | 30.0% | |
| GAACATAGTCATCATCAATA+TGG | + | chr7.2:33757418-33757437 | None:intergenic | 30.0% | |
| GATATGATCATTGGTGAATA+TGG | + | chr7.2:33757534-33757553 | None:intergenic | 30.0% | |
| GATTCTAATTCCATTAGAGA+TGG | + | chr7.2:33757590-33757609 | None:intergenic | 30.0% | |
| TAAAGGGAAATCATCATAAG+TGG | + | chr7.2:33757768-33757787 | None:intergenic | 30.0% | |
| TGGAAATTGGATATGATCAT+TGG | + | chr7.2:33757543-33757562 | None:intergenic | 30.0% | |
| TTCATCACAATCTTCTAACA+TGG | + | chr7.2:33758188-33758207 | None:intergenic | 30.0% | |
| ! | ACATGTGGAAAATTTTGTGA+AGG | + | chr7.2:33757689-33757708 | None:intergenic | 30.0% |
| ! | ATCATGTGGTTTGAAATTGA+AGG | - | chr7.2:33758381-33758400 | MS.gene069014:CDS | 30.0% |
| ! | CATGTGGAAAATTTTGTGAA+GGG | + | chr7.2:33757688-33757707 | None:intergenic | 30.0% |
| ! | GGTATTTTATCAAGGGAATT+TGG | - | chr7.2:33758114-33758133 | MS.gene069014:CDS | 30.0% |
| ! | TCTGATTTCATTGAAAGTGT+TGG | + | chr7.2:33757818-33757837 | None:intergenic | 30.0% |
| ! | TCTTGATTGGTTACAAACAT+GGG | - | chr7.2:33758786-33758805 | MS.gene069014:CDS | 30.0% |
| ! | TGAGACACTTGCATTTTATT+TGG | - | chr7.2:33758021-33758040 | MS.gene069014:CDS | 30.0% |
| ! | TTTTATCAAGGGAATTTGGT+TGG | - | chr7.2:33758118-33758137 | MS.gene069014:CDS | 30.0% |
| !! | GGAATTATTACTTTTGGTGA+TGG | - | chr7.2:33758595-33758614 | MS.gene069014:CDS | 30.0% |
| !! | TGAATGTGTTTGGAATTTTG+AGG | - | chr7.2:33758327-33758346 | MS.gene069014:CDS | 30.0% |
| !! | TGGAAAAATGGCTCATTTTT+CGG | - | chr7.2:33758138-33758157 | MS.gene069014:CDS | 30.0% |
| !! | TTGGCTTTCAAGTTAATGAT+AGG | - | chr7.2:33758478-33758497 | MS.gene069014:CDS | 30.0% |
| !!! | GTCATTTTTTGAAGGGAATT+TGG | - | chr7.2:33758657-33758676 | MS.gene069014:CDS | 30.0% |
| AAAATAATGAACGAAACGGG+TGG | - | chr7.2:33758442-33758461 | MS.gene069014:CDS | 35.0% | |
| AATCATGGAGAATACCTCAA+AGG | - | chr7.2:33758058-33758077 | MS.gene069014:CDS | 35.0% | |
| AATGATAGGTCTTCCACATA+TGG | - | chr7.2:33758492-33758511 | MS.gene069014:CDS | 35.0% | |
| ACCAATTTGTGGACTCAAAA+TGG | + | chr7.2:33757621-33757640 | None:intergenic | 35.0% | |
| AGGGAATTTGGTTGGAAAAA+TGG | - | chr7.2:33758126-33758145 | MS.gene069014:CDS | 35.0% | |
| AGTGATGGCTATCATCATAA+AGG | - | chr7.2:33758820-33758839 | MS.gene069014:CDS | 35.0% | |
| ATGATAGGTCTTCCACATAT+GGG | - | chr7.2:33758493-33758512 | MS.gene069014:CDS | 35.0% | |
| ATGCCAAAAGGGAACTTTAT+GGG | - | chr7.2:33758350-33758369 | MS.gene069014:CDS | 35.0% | |
| CAAAAAGTTACCACTCCAAT+TGG | - | chr7.2:33757989-33758008 | MS.gene069014:CDS | 35.0% | |
| GAAATTGAAGGTAGAGGAAA+AGG | - | chr7.2:33758393-33758412 | MS.gene069014:CDS | 35.0% | |
| GAATACCAAGAAGAAAGTGA+AGG | - | chr7.2:33757656-33757675 | MS.gene069014:CDS | 35.0% | |
| GAGGATTTGATCAAGAACTA+TGG | - | chr7.2:33758565-33758584 | MS.gene069014:CDS | 35.0% | |
| GATCAAGAACTATGGTATCA+AGG | - | chr7.2:33758573-33758592 | MS.gene069014:CDS | 35.0% | |
| GATGATGACTATGTTCCATA+TGG | - | chr7.2:33757422-33757441 | MS.gene069014:CDS | 35.0% | |
| TACTCTGCCACAAGAAAATA+TGG | - | chr7.2:33757862-33757881 | MS.gene069014:CDS | 35.0% | |
| TATGGGTATGCTAAATCATG+TGG | - | chr7.2:33758367-33758386 | MS.gene069014:CDS | 35.0% | |
| TCCAAGGTTTCTTCATCAAT+TGG | + | chr7.2:33757563-33757582 | None:intergenic | 35.0% | |
| TCCAATTGATGAAGAAACCT+TGG | - | chr7.2:33757559-33757578 | MS.gene069014:CDS | 35.0% | |
| ! | ATACCCATAAAGTTCCCTTT+TGG | + | chr7.2:33758356-33758375 | None:intergenic | 35.0% |
| ! | CAATTGGAGTGGTAACTTTT+TGG | + | chr7.2:33757991-33758010 | None:intergenic | 35.0% |
| ! | CACAGGGAGAATTTTGTAAA+GGG | + | chr7.2:33757784-33757803 | None:intergenic | 35.0% |
| ! | CTCTTGATTGGTTACAAACA+TGG | - | chr7.2:33758785-33758804 | MS.gene069014:CDS | 35.0% |
| ! | TCACAGGGAGAATTTTGTAA+AGG | + | chr7.2:33757785-33757804 | None:intergenic | 35.0% |
| ! | TGGTTTGAAATTGAAGGTAG+AGG | - | chr7.2:33758387-33758406 | MS.gene069014:CDS | 35.0% |
| !! | GAATTTTGAGGATGCCAAAA+GGG | - | chr7.2:33758339-33758358 | MS.gene069014:CDS | 35.0% |
| !! | TCCATTTTGAGTCCACAAAT+TGG | - | chr7.2:33757617-33757636 | MS.gene069014:CDS | 35.0% |
| !!! | GAATTTTCAGGCTGCTTTTA+AGG | - | chr7.2:33758093-33758112 | MS.gene069014:CDS | 35.0% |
| AAAATTCTCCCTGTGATGCA+TGG | - | chr7.2:33757789-33757808 | MS.gene069014:CDS | 40.0% | |
| AACTCCCTTCACTTTCTTCT+TGG | + | chr7.2:33757664-33757683 | None:intergenic | 40.0% | |
| CATTAGAGATGGAAGTTCCA+AGG | + | chr7.2:33757579-33757598 | None:intergenic | 40.0% | |
| CTTCTAACCATTCCCATATG+TGG | + | chr7.2:33758508-33758527 | None:intergenic | 40.0% | |
| CTTGGAACTTCCATCTCTAA+TGG | - | chr7.2:33757577-33757596 | MS.gene069014:CDS | 40.0% | |
| GAAATCATCATAAGTGGCAC+TGG | + | chr7.2:33757762-33757781 | None:intergenic | 40.0% | |
| GAAGGTAGAGGAAAAGGAAT+TGG | - | chr7.2:33758399-33758418 | MS.gene069014:CDS | 40.0% | |
| GATGCCAAAAGGGAACTTTA+TGG | - | chr7.2:33758349-33758368 | MS.gene069014:CDS | 40.0% | |
| GATTTGAACTATACCCTTCG+AGG | + | chr7.2:33757712-33757731 | None:intergenic | 40.0% | |
| GCTCAAGAAGTGACAAATCA+TGG | - | chr7.2:33758043-33758062 | MS.gene069014:CDS | 40.0% | |
| GGTTTGGAAATGGTGTTCAA+TGG | - | chr7.2:33758227-33758246 | MS.gene069014:CDS | 40.0% | |
| TGGGAAGAGATGAAAAGTGA+TGG | - | chr7.2:33758805-33758824 | MS.gene069014:CDS | 40.0% | |
| TGTTCCATATGGCATCATCA+TGG | - | chr7.2:33757433-33757452 | MS.gene069014:CDS | 40.0% | |
| ! | AATTTTCCACATGTCCTCGA+AGG | - | chr7.2:33757695-33757714 | MS.gene069014:CDS | 40.0% |
| ! | ATTTTACAACTGTCTCCGAG+GGG | + | chr7.2:33757734-33757753 | None:intergenic | 40.0% |
| ! | ATTTTCCACATGTCCTCGAA+GGG | - | chr7.2:33757696-33757715 | MS.gene069014:CDS | 40.0% |
| ! | CATTTTACAACTGTCTCCGA+GGG | + | chr7.2:33757735-33757754 | None:intergenic | 40.0% |
| ! | CGAGGCATACAAGAATTTTC+AGG | - | chr7.2:33758081-33758100 | MS.gene069014:CDS | 40.0% |
| ! | GGGTGGAAAGAAAGAGTTTT+TGG | - | chr7.2:33758459-33758478 | MS.gene069014:CDS | 40.0% |
| ! | TCATCCATGATGATGCCATA+TGG | + | chr7.2:33757440-33757459 | None:intergenic | 40.0% |
| ! | TGTTCAATGGCCTTTTCTCT+TGG | - | chr7.2:33758240-33758259 | MS.gene069014:CDS | 40.0% |
| !! | GGAATTTTGAGGATGCCAAA+AGG | - | chr7.2:33758338-33758357 | MS.gene069014:CDS | 40.0% |
| !! | TGCATGTGAAGTGTTGTTTG+TGG | - | chr7.2:33758747-33758766 | MS.gene069014:CDS | 40.0% |
| !! | TGCTTTTTGTCCTTTCTCCA+AGG | + | chr7.2:33757939-33757958 | None:intergenic | 40.0% |
| AAGAGAGTCACCAATTGGAG+TGG | + | chr7.2:33758002-33758021 | None:intergenic | 45.0% | |
| AGGTCTTCCACATATGGGAA+TGG | - | chr7.2:33758498-33758517 | MS.gene069014:CDS | 45.0% | |
| AGTGAGTCTTCCACACTTGA+TGG | - | chr7.2:33757898-33757917 | MS.gene069014:CDS | 45.0% | |
| CCTCGGAGACAGTTGTAAAA+TGG | - | chr7.2:33757733-33757752 | MS.gene069014:CDS | 45.0% | |
| GAAACAGCCTCCAAGAGAAA+AGG | + | chr7.2:33758253-33758272 | None:intergenic | 45.0% | |
| GGGTATAGTTCAAATCCCCT+CGG | - | chr7.2:33757716-33757735 | MS.gene069014:CDS | 45.0% | |
| GTCTCAAGAGAGTCACCAAT+TGG | + | chr7.2:33758007-33758026 | None:intergenic | 45.0% | |
| TCAAGTGTGGAAGACTCACT+TGG | + | chr7.2:33757898-33757917 | None:intergenic | 45.0% | |
| ! | ATCATCATAAGTGGCACTGG+CGG | + | chr7.2:33757759-33757778 | None:intergenic | 45.0% |
| ! | CCATTTTACAACTGTCTCCG+AGG | + | chr7.2:33757736-33757755 | None:intergenic | 45.0% |
| ! | TCAATGGCCTTTTCTCTTGG+AGG | - | chr7.2:33758243-33758262 | MS.gene069014:CDS | 45.0% |
| !! | TGAGTTTTTGAAGGTAGCCG+AGG | - | chr7.2:33758546-33758565 | MS.gene069014:CDS | 45.0% |
| CATGGTGAAGCCTTGGAGAA+AGG | - | chr7.2:33757926-33757945 | MS.gene069014:CDS | 50.0% | |
| CCATGTGCTTCCATCAAGTG+TGG | + | chr7.2:33757911-33757930 | None:intergenic | 50.0% | |
| CTATACCCTTCGAGGACATG+TGG | + | chr7.2:33757704-33757723 | None:intergenic | 50.0% | |
| GTTGGACTCCATGCATCACA+GGG | + | chr7.2:33757800-33757819 | None:intergenic | 50.0% | |
| TCTTGTATGCCTCGCCTTTG+AGG | + | chr7.2:33758075-33758094 | None:intergenic | 50.0% | |
| TGGAGAATACCTCAAAGGCG+AGG | - | chr7.2:33758063-33758082 | MS.gene069014:CDS | 50.0% | |
| TGTTGGACTCCATGCATCAC+AGG | + | chr7.2:33757801-33757820 | None:intergenic | 50.0% | |
| ! | CCACACTTGATGGAAGCACA+TGG | - | chr7.2:33757908-33757927 | MS.gene069014:CDS | 50.0% |
| ! | GGAAGCACATGGTGAAGCCT+TGG | - | chr7.2:33757919-33757938 | MS.gene069014:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 33757407 | 33758855 | 33757407 | ID=MS.gene069014 |
| chr7.2 | mRNA | 33757407 | 33758855 | 33757407 | ID=MS.gene069014.t1;Parent=MS.gene069014 |
| chr7.2 | exon | 33757407 | 33758855 | 33757407 | ID=MS.gene069014.t1.exon1;Parent=MS.gene069014.t1 |
| chr7.2 | CDS | 33757407 | 33758855 | 33757407 | ID=cds.MS.gene069014.t1;Parent=MS.gene069014.t1 |
| Gene Sequence |
| Protein sequence |
