Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069016.t1 | XP_003623338.1 | 90.6 | 551 | 48 | 2 | 1 | 551 | 39 | 585 | 1.90E-267 | 931.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069016.t1 | Q5NE24 | 25.9 | 309 | 206 | 10 | 248 | 549 | 207 | 499 | 1.1e-13 | 79.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069016.t1 | G7KSD5 | 90.6 | 551 | 48 | 2 | 1 | 551 | 39 | 585 | 1.4e-267 | 931.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene069016.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069016.t1 | MTR_7g069740 | 92.922 | 551 | 35 | 2 | 1 | 551 | 39 | 585 | 0.0 | 1022 |
| MS.gene069016.t1 | MTR_3g072710 | 25.310 | 403 | 250 | 15 | 180 | 549 | 115 | 499 | 2.52e-16 | 82.4 |
| MS.gene069016.t1 | MTR_5g058860 | 25.750 | 400 | 250 | 15 | 180 | 549 | 114 | 496 | 8.87e-16 | 80.5 |
| MS.gene069016.t1 | MTR_7g027190 | 25.404 | 433 | 242 | 21 | 164 | 550 | 276 | 673 | 6.75e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 92 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCATGAATATTACCAATT+TGG | 0.125992 | 7.2:+33799321 | None:intergenic |
| ACCAATTTGGGGACTCAAAA+TGG | 0.187480 | 7.2:+33799334 | None:intergenic |
| CACATAATTGATTATTGTTT+TGG | 0.189427 | 7.2:-33798738 | MS.gene069016:CDS |
| TGAAATTGACATCAATTAAA+TGG | 0.189748 | 7.2:-33798659 | MS.gene069016:CDS |
| TTTCTTCATCAATTGGAAAT+TGG | 0.210829 | 7.2:+33799399 | None:intergenic |
| TTGGAAATTGGATATGATTA+TGG | 0.210900 | 7.2:+33799411 | None:intergenic |
| TTCATGAATATTACCAATTT+GGG | 0.226150 | 7.2:+33799322 | None:intergenic |
| TACTTTGCCACAAGAAAATA+TGG | 0.244532 | 7.2:-33799087 | MS.gene069016:CDS |
| AAATGAGAATCAACTTGTTT+TGG | 0.251878 | 7.2:-33798001 | MS.gene069016:CDS |
| AACTCCCTTCACTTTCTTCT+TGG | 0.266056 | 7.2:+33799288 | None:intergenic |
| CTTGTATATCTTCTCTTGAT+TGG | 0.270075 | 7.2:-33798176 | MS.gene069016:CDS |
| CATTAGAGATGGAAGTTCTA+AGG | 0.276688 | 7.2:+33799376 | None:intergenic |
| AGCAAGGGAATTATTACTTT+TGG | 0.295898 | 7.2:-33798360 | MS.gene069016:CDS |
| CCTCGGAGACGGTTGTAAAA+TGG | 0.318498 | 7.2:-33799216 | MS.gene069016:CDS |
| TCTAAGGTTTCTTCATCAAT+TGG | 0.336948 | 7.2:+33799392 | None:intergenic |
| GATATGATTATGGGTGAATA+TGG | 0.340804 | 7.2:+33799421 | None:intergenic |
| GATGACCGGTCTTCCTCATA+TGG | 0.343694 | 7.2:-33798457 | MS.gene069016:CDS |
| CTTAGAACTTCCATCTCTAA+TGG | 0.346666 | 7.2:-33799375 | MS.gene069016:CDS |
| ATACTCATAAAGTTCCCTTT+TGG | 0.352894 | 7.2:+33798596 | None:intergenic |
| CTCTTGATTGGTTGCAAACA+TGG | 0.356216 | 7.2:-33798164 | MS.gene069016:CDS |
| TCTTGTATGCCTCGCCTTTG+AGG | 0.374060 | 7.2:+33798877 | None:intergenic |
| AGTGAGTCTTCCACACTTGA+TGG | 0.390562 | 7.2:-33799051 | MS.gene069016:CDS |
| TGGAAATTGGATATGATTAT+GGG | 0.400619 | 7.2:+33799412 | None:intergenic |
| ATGAAAATTCTGCATCTGTT+TGG | 0.402276 | 7.2:-33798632 | MS.gene069016:CDS |
| GAAGGTAGAGGAAAAGGAAT+TGG | 0.405087 | 7.2:-33798550 | MS.gene069016:CDS |
| GAAATTGAAGGTAGAGGAAA+AGG | 0.406350 | 7.2:-33798556 | MS.gene069016:CDS |
| TTTATCAAGGAAATTTGGTT+GGG | 0.424798 | 7.2:-33798830 | MS.gene069016:CDS |
| GGTGCATTACAAGGCTTTGT+TGG | 0.436581 | 7.2:-33798271 | MS.gene069016:CDS |
| GAAACAGTCTCCAATAGAAA+AGG | 0.449571 | 7.2:+33798699 | None:intergenic |
| AGTGATGGCTATCATCATAA+AGG | 0.457503 | 7.2:-33798129 | MS.gene069016:CDS |
| GAGGATTTGATCAAGAACTA+TGG | 0.460555 | 7.2:-33798384 | MS.gene069016:CDS |
| TTGGCTTTCAATTTGATGAC+CGG | 0.461685 | 7.2:-33798471 | MS.gene069016:CDS |
| GTCTCAAGAGAGTCACCAAT+TGG | 0.467270 | 7.2:+33798945 | None:intergenic |
| TCATATCAAGCAAGAATTGA+AGG | 0.470729 | 7.2:-33798027 | MS.gene069016:CDS |
| GATCAAAATAAAGAACGAAA+AGG | 0.473295 | 7.2:-33798511 | MS.gene069016:CDS |
| TGCATCTGTTTGGAATTTCG+AGG | 0.475745 | 7.2:-33798622 | MS.gene069016:CDS |
| CTATACCCTTCGAGGTTATG+TGG | 0.478048 | 7.2:+33799248 | None:intergenic |
| TGCATGTGAAATATTGTTTG+TGG | 0.478742 | 7.2:-33798202 | MS.gene069016:CDS |
| TCTGATATCATTGAAAGTGT+TGG | 0.484635 | 7.2:+33799134 | None:intergenic |
| AGGGAATTTGGTGCATTACA+AGG | 0.487309 | 7.2:-33798280 | MS.gene069016:CDS |
| ACATGCTTATGAATGTTTGA+AGG | 0.491685 | 7.2:-33798412 | MS.gene069016:CDS |
| CTTCTAACCATTCCCATATG+AGG | 0.492028 | 7.2:+33798444 | None:intergenic |
| ATGACCGGTCTTCCTCATAT+GGG | 0.495090 | 7.2:-33798456 | MS.gene069016:CDS |
| TGTTGGACTCCATGCATCAC+AGG | 0.496115 | 7.2:+33799151 | None:intergenic |
| GCTCAAGAAGTGACAAATCA+TGG | 0.497130 | 7.2:-33798906 | MS.gene069016:CDS |
| ATCAAAATAAAGAACGAAAA+GGG | 0.498103 | 7.2:-33798510 | MS.gene069016:CDS |
| GGAATTTCGAGGATACCAAA+AGG | 0.507394 | 7.2:-33798611 | MS.gene069016:CDS |
| TCATCCATGATGATGCCATA+TGG | 0.508726 | 7.2:+33799560 | None:intergenic |
| TCATCCATGATGATGCCATA+TGG | 0.509020 | 7.2:+33799515 | None:intergenic |
| ATCATGTGGTTTGAAATTGA+AGG | 0.512511 | 7.2:-33798568 | MS.gene069016:CDS |
| CATGGTGAAGCCTTGGAGAA+AGG | 0.516575 | 7.2:-33799023 | MS.gene069016:CDS |
| TATTTGAACTATACCCTTCG+AGG | 0.518294 | 7.2:+33799240 | None:intergenic |
| GGAAGCACATGGTGAAGCCT+TGG | 0.523810 | 7.2:-33799030 | MS.gene069016:CDS |
| TGGTTTGAAATTGAAGGTAG+AGG | 0.525487 | 7.2:-33798562 | MS.gene069016:CDS |
| GATGATGACTATGTTCCATA+TGG | 0.526351 | 7.2:-33799530 | MS.gene069016:CDS |
| GTTGATGACTATGATCCATA+TGG | 0.530988 | 7.2:-33799575 | MS.gene069016:CDS |
| GAATTTCGAGGATACCAAAA+GGG | 0.531446 | 7.2:-33798610 | MS.gene069016:CDS |
| TAAAGGGAAATGATCATAAG+TGG | 0.536816 | 7.2:+33799184 | None:intergenic |
| CGGTCTTCCTCATATGGGAA+TGG | 0.548383 | 7.2:-33798451 | MS.gene069016:CDS |
| ATCAAGAACTATGGTAGCAA+GGG | 0.551686 | 7.2:-33798375 | MS.gene069016:CDS |
| AAAATTCTCCCTGTGATGCA+TGG | 0.552151 | 7.2:-33799160 | MS.gene069016:CDS |
| TATGAGTATGCTAAATCATG+TGG | 0.552563 | 7.2:-33798582 | MS.gene069016:CDS |
| GGTGAGATTAGCTTAGAATG+TGG | 0.554171 | 7.2:-33798108 | MS.gene069016:CDS |
| GAATCTAATTCCATTAGAGA+TGG | 0.557271 | 7.2:+33799365 | None:intergenic |
| GAAATGATCATAAGTGGCAC+TGG | 0.557550 | 7.2:+33799190 | None:intergenic |
| TGATCCATATGGCATCATCA+TGG | 0.565829 | 7.2:-33799564 | MS.gene069016:CDS |
| TGTTCCATATGGCATCATCA+TGG | 0.566239 | 7.2:-33799519 | MS.gene069016:CDS |
| GATCAAGAACTATGGTAGCA+AGG | 0.567301 | 7.2:-33798376 | MS.gene069016:CDS |
| ATAGTTCTTGATCAAATCCT+CGG | 0.572634 | 7.2:+33798386 | None:intergenic |
| CATTCCCATATGAGGAAGAC+CGG | 0.576719 | 7.2:+33798452 | None:intergenic |
| TCAAGTGTGGAAGACTCACT+TGG | 0.579458 | 7.2:+33799054 | None:intergenic |
| CAATCAAGAGAAGATATACA+AGG | 0.583066 | 7.2:+33798177 | None:intergenic |
| GAAGTCAGAGAAATGTTGAG+AGG | 0.583320 | 7.2:-33798060 | MS.gene069016:CDS |
| TCTTGATTGGTTGCAAACAT+GGG | 0.586740 | 7.2:-33798163 | MS.gene069016:CDS |
| TATTACCAAGAAGAAAGTGA+AGG | 0.596617 | 7.2:-33799293 | MS.gene069016:CDS |
| TGGGAAGAGATGAAAAGTGA+TGG | 0.608114 | 7.2:-33798144 | MS.gene069016:CDS |
| CCATGTGCTTCCATCAAGTG+TGG | 0.618160 | 7.2:+33799041 | None:intergenic |
| ATTACCAAGAAGAAAGTGAA+GGG | 0.618537 | 7.2:-33799292 | MS.gene069016:CDS |
| TCATGAATATTACCAATTTG+GGG | 0.620776 | 7.2:+33799323 | None:intergenic |
| AGTTCAAATAACCTCGGAGA+CGG | 0.630207 | 7.2:-33799227 | MS.gene069016:CDS |
| ATGATCATAAGTGGCACTGG+CGG | 0.631598 | 7.2:+33799193 | None:intergenic |
| GTTGGACTCCATGCATCACA+GGG | 0.638138 | 7.2:+33799152 | None:intergenic |
| GTCATCAACATGGTCAACCA+TGG | 0.639550 | 7.2:+33799589 | None:intergenic |
| GGGTATAGTTCAAATAACCT+CGG | 0.650625 | 7.2:-33799233 | MS.gene069016:CDS |
| CCACACTTGATGGAAGCACA+TGG | 0.654957 | 7.2:-33799041 | MS.gene069016:CDS |
| AATCATGGAGAATACCTCAA+AGG | 0.661739 | 7.2:-33798891 | MS.gene069016:CDS |
| AAGAGAGTCACCAATTGGAG+TGG | 0.663623 | 7.2:+33798950 | None:intergenic |
| TGAATGTTTGAAGGTAGCCG+AGG | 0.670390 | 7.2:-33798403 | MS.gene069016:CDS |
| AAAATAAAGAACGAAAAGGG+CGG | 0.683472 | 7.2:-33798507 | MS.gene069016:CDS |
| TGGAGAATACCTCAAAGGCG+AGG | 0.686092 | 7.2:-33798886 | MS.gene069016:CDS |
| GAACATAGTCATCATCAACA+TGG | 0.707488 | 7.2:+33799537 | None:intergenic |
| ATGGATCATAGTCATCAACA+TGG | 0.710348 | 7.2:+33799579 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCAAAATAAAGAACGAAAA+GGG | - | chr7.2:33799031-33799050 | MS.gene069016:CDS | 20.0% |
| !! | TGAAATTGACATCAATTAAA+TGG | - | chr7.2:33798882-33798901 | MS.gene069016:CDS | 20.0% |
| !! | TTCATGAATATTACCAATTT+GGG | + | chr7.2:33798222-33798241 | None:intergenic | 20.0% |
| !!! | AACTGTTAAGATTTTCTATT+TGG | - | chr7.2:33799578-33799597 | MS.gene069016:CDS | 20.0% |
| !!! | AATTTCATGTCATTTTTTGA+AGG | - | chr7.2:33799241-33799260 | MS.gene069016:CDS | 20.0% |
| !!! | ATTGATTATTGTTTTGGAAA+TGG | - | chr7.2:33798809-33798828 | MS.gene069016:CDS | 20.0% |
| !!! | ATTTCATGTCATTTTTTGAA+GGG | - | chr7.2:33799242-33799261 | MS.gene069016:CDS | 20.0% |
| !!! | CACATAATTGATTATTGTTT+TGG | - | chr7.2:33798803-33798822 | MS.gene069016:CDS | 20.0% |
| ! | GATCAAAATAAAGAACGAAA+AGG | - | chr7.2:33799030-33799049 | MS.gene069016:CDS | 25.0% |
| ! | GTTCATGAATATTACCAATT+TGG | + | chr7.2:33798223-33798242 | None:intergenic | 25.0% |
| ! | TCATGAATATTACCAATTTG+GGG | + | chr7.2:33798221-33798240 | None:intergenic | 25.0% |
| ! | TGGAAATTGGATATGATTAT+GGG | + | chr7.2:33798132-33798151 | None:intergenic | 25.0% |
| ! | TTGGAAATTGGATATGATTA+TGG | + | chr7.2:33798133-33798152 | None:intergenic | 25.0% |
| ! | TTTATCAAGGAAATTTGGTT+GGG | - | chr7.2:33798711-33798730 | MS.gene069016:CDS | 25.0% |
| ! | TTTCTTCATCAATTGGAAAT+TGG | + | chr7.2:33798145-33798164 | None:intergenic | 25.0% |
| !! | GGTATTTTATCAAGGAAATT+TGG | - | chr7.2:33798706-33798725 | MS.gene069016:CDS | 25.0% |
| !! | TATGTGGAAAATTTTGTGAA+GGG | + | chr7.2:33798280-33798299 | None:intergenic | 25.0% |
| !! | TCAATTTCCATATTTTCTTG+TGG | + | chr7.2:33798464-33798483 | None:intergenic | 25.0% |
| !! | TTATGTGGAAAATTTTGTGA+AGG | + | chr7.2:33798281-33798300 | None:intergenic | 25.0% |
| !! | TTTTATCAAGGAAATTTGGT+TGG | - | chr7.2:33798710-33798729 | MS.gene069016:CDS | 25.0% |
| !!! | AAATGAGAATCAACTTGTTT+TGG | - | chr7.2:33799540-33799559 | MS.gene069016:CDS | 25.0% |
| !!! | ATTGAGCAAAAATGTTTTGA+TGG | - | chr7.2:33799459-33799478 | MS.gene069016:CDS | 25.0% |
| !!! | GCTTTTAAGGTATTTTATCA+AGG | - | chr7.2:33798698-33798717 | MS.gene069016:CDS | 25.0% |
| AAAATAAAGAACGAAAAGGG+CGG | - | chr7.2:33799034-33799053 | MS.gene069016:CDS | 30.0% | |
| ACATGCTTATGAATGTTTGA+AGG | - | chr7.2:33799129-33799148 | MS.gene069016:CDS | 30.0% | |
| ATAGTTCTTGATCAAATCCT+CGG | + | chr7.2:33799158-33799177 | None:intergenic | 30.0% | |
| ATGAAAATTCTGCATCTGTT+TGG | - | chr7.2:33798909-33798928 | MS.gene069016:CDS | 30.0% | |
| ATTACCAAGAAGAAAGTGAA+GGG | - | chr7.2:33798249-33798268 | MS.gene069016:CDS | 30.0% | |
| CAATCAAGAGAAGATATACA+AGG | + | chr7.2:33799367-33799386 | None:intergenic | 30.0% | |
| CTTGTATATCTTCTCTTGAT+TGG | - | chr7.2:33799365-33799384 | MS.gene069016:CDS | 30.0% | |
| GAATCTAATTCCATTAGAGA+TGG | + | chr7.2:33798179-33798198 | None:intergenic | 30.0% | |
| GATATGATTATGGGTGAATA+TGG | + | chr7.2:33798123-33798142 | None:intergenic | 30.0% | |
| TAAAGGGAAATGATCATAAG+TGG | + | chr7.2:33798360-33798379 | None:intergenic | 30.0% | |
| TACTTTGCCACAAGAAAATA+TGG | - | chr7.2:33798454-33798473 | MS.gene069016:CDS | 30.0% | |
| TATGAGTATGCTAAATCATG+TGG | - | chr7.2:33798959-33798978 | MS.gene069016:CDS | 30.0% | |
| TATTACCAAGAAGAAAGTGA+AGG | - | chr7.2:33798248-33798267 | MS.gene069016:CDS | 30.0% | |
| TCATATCAAGCAAGAATTGA+AGG | - | chr7.2:33799514-33799533 | MS.gene069016:CDS | 30.0% | |
| TGCATGTGAAATATTGTTTG+TGG | - | chr7.2:33799339-33799358 | MS.gene069016:CDS | 30.0% | |
| ! | AGCAAGGGAATTATTACTTT+TGG | - | chr7.2:33799181-33799200 | MS.gene069016:CDS | 30.0% |
| ! | ATACTCATAAAGTTCCCTTT+TGG | + | chr7.2:33798948-33798967 | None:intergenic | 30.0% |
| ! | ATCATGTGGTTTGAAATTGA+AGG | - | chr7.2:33798973-33798992 | MS.gene069016:CDS | 30.0% |
| ! | TCTAAGGTTTCTTCATCAAT+TGG | + | chr7.2:33798152-33798171 | None:intergenic | 30.0% |
| ! | TCTGATATCATTGAAAGTGT+TGG | + | chr7.2:33798410-33798429 | None:intergenic | 30.0% |
| ! | TGAGACACTTGCATTTTATT+TGG | - | chr7.2:33798613-33798632 | MS.gene069016:CDS | 30.0% |
| !! | GGAATTATTACTTTTGGTGA+TGG | - | chr7.2:33799187-33799206 | MS.gene069016:CDS | 30.0% |
| !!! | AGAATCAACTTGTTTTGGAA+TGG | - | chr7.2:33799545-33799564 | MS.gene069016:CDS | 30.0% |
| !!! | GTCATTTTTTGAAGGGAATT+TGG | - | chr7.2:33799249-33799268 | MS.gene069016:CDS | 30.0% |
| AATCATGGAGAATACCTCAA+AGG | - | chr7.2:33798650-33798669 | MS.gene069016:CDS | 35.0% | |
| AGTGATGGCTATCATCATAA+AGG | - | chr7.2:33799412-33799431 | MS.gene069016:CDS | 35.0% | |
| ATCAAGAACTATGGTAGCAA+GGG | - | chr7.2:33799166-33799185 | MS.gene069016:CDS | 35.0% | |
| ATGGATCATAGTCATCAACA+TGG | + | chr7.2:33797965-33797984 | None:intergenic | 35.0% | |
| CAAAAAGTTACCACTCCAAT+TGG | - | chr7.2:33798581-33798600 | MS.gene069016:CDS | 35.0% | |
| CATTAGAGATGGAAGTTCTA+AGG | + | chr7.2:33798168-33798187 | None:intergenic | 35.0% | |
| CTTAGAACTTCCATCTCTAA+TGG | - | chr7.2:33798166-33798185 | MS.gene069016:CDS | 35.0% | |
| GAAACAGTCTCCAATAGAAA+AGG | + | chr7.2:33798845-33798864 | None:intergenic | 35.0% | |
| GAAATTGAAGGTAGAGGAAA+AGG | - | chr7.2:33798985-33799004 | MS.gene069016:CDS | 35.0% | |
| GAACATAGTCATCATCAACA+TGG | + | chr7.2:33798007-33798026 | None:intergenic | 35.0% | |
| GAATTTCGAGGATACCAAAA+GGG | - | chr7.2:33798931-33798950 | MS.gene069016:CDS | 35.0% | |
| GAGGATTTGATCAAGAACTA+TGG | - | chr7.2:33799157-33799176 | MS.gene069016:CDS | 35.0% | |
| GATGATGACTATGTTCCATA+TGG | - | chr7.2:33798011-33798030 | MS.gene069016:CDS | 35.0% | |
| GGGTATAGTTCAAATAACCT+CGG | - | chr7.2:33798308-33798327 | MS.gene069016:CDS | 35.0% | |
| TATTTGAACTATACCCTTCG+AGG | + | chr7.2:33798304-33798323 | None:intergenic | 35.0% | |
| ! | AATTTTCCACATAACCTCGA+AGG | - | chr7.2:33798287-33798306 | MS.gene069016:CDS | 35.0% |
| ! | ATTTTCCACATAACCTCGAA+GGG | - | chr7.2:33798288-33798307 | MS.gene069016:CDS | 35.0% |
| ! | CAATTGGAGTGGTAACTTTT+TGG | + | chr7.2:33798583-33798602 | None:intergenic | 35.0% |
| ! | CACAGGGAGAATTTTGTAAA+GGG | + | chr7.2:33798376-33798395 | None:intergenic | 35.0% |
| ! | TCACAGGGAGAATTTTGTAA+AGG | + | chr7.2:33798377-33798396 | None:intergenic | 35.0% |
| ! | TCTTGATTGGTTGCAAACAT+GGG | - | chr7.2:33799378-33799397 | MS.gene069016:CDS | 35.0% |
| ! | TGGTTTGAAATTGAAGGTAG+AGG | - | chr7.2:33798979-33798998 | MS.gene069016:CDS | 35.0% |
| ! | TGTTCAATGGCCTTTTCTAT+TGG | - | chr7.2:33798832-33798851 | MS.gene069016:CDS | 35.0% |
| ! | TTGGCTTTCAATTTGATGAC+CGG | - | chr7.2:33799070-33799089 | MS.gene069016:CDS | 35.0% |
| !! | GTTGATGACTATGATCCATA+TGG | - | chr7.2:33797966-33797985 | MS.gene069016:CDS | 35.0% |
| !!! | CAACTTGTTTTGGAATGGAA+AGG | - | chr7.2:33799550-33799569 | MS.gene069016:CDS | 35.0% |
| !!! | GAATTTTCAGGCTGCTTTTA+AGG | - | chr7.2:33798685-33798704 | MS.gene069016:CDS | 35.0% |
| !!! | GTTTTGGAAATGGTGTTCAA+TGG | - | chr7.2:33798819-33798838 | MS.gene069016:CDS | 35.0% |
| AAAATTCTCCCTGTGATGCA+TGG | - | chr7.2:33798381-33798400 | MS.gene069016:CDS | 40.0% | |
| AACTCCCTTCACTTTCTTCT+TGG | + | chr7.2:33798256-33798275 | None:intergenic | 40.0% | |
| ACCAATTTGGGGACTCAAAA+TGG | + | chr7.2:33798210-33798229 | None:intergenic | 40.0% | |
| AGTTCAAATAACCTCGGAGA+CGG | - | chr7.2:33798314-33798333 | MS.gene069016:CDS | 40.0% | |
| CTTCTAACCATTCCCATATG+AGG | + | chr7.2:33799100-33799119 | None:intergenic | 40.0% | |
| GAAATGATCATAAGTGGCAC+TGG | + | chr7.2:33798354-33798373 | None:intergenic | 40.0% | |
| GAAGGTAGAGGAAAAGGAAT+TGG | - | chr7.2:33798991-33799010 | MS.gene069016:CDS | 40.0% | |
| GAAGTCAGAGAAATGTTGAG+AGG | - | chr7.2:33799481-33799500 | MS.gene069016:CDS | 40.0% | |
| GATCAAGAACTATGGTAGCA+AGG | - | chr7.2:33799165-33799184 | MS.gene069016:CDS | 40.0% | |
| GCTCAAGAAGTGACAAATCA+TGG | - | chr7.2:33798635-33798654 | MS.gene069016:CDS | 40.0% | |
| GGAATTTCGAGGATACCAAA+AGG | - | chr7.2:33798930-33798949 | MS.gene069016:CDS | 40.0% | |
| TGATCCATATGGCATCATCA+TGG | - | chr7.2:33797977-33797996 | MS.gene069016:CDS | 40.0% | |
| TGGGAAGAGATGAAAAGTGA+TGG | - | chr7.2:33799397-33799416 | MS.gene069016:CDS | 40.0% | |
| TGTTCCATATGGCATCATCA+TGG | - | chr7.2:33798022-33798041 | MS.gene069016:CDS | 40.0% | |
| ! | CGAGGCATACAAGAATTTTC+AGG | - | chr7.2:33798673-33798692 | MS.gene069016:CDS | 40.0% |
| ! | CTCTTGATTGGTTGCAAACA+TGG | - | chr7.2:33799377-33799396 | MS.gene069016:CDS | 40.0% |
| ! | TCATCCATGATGATGCCATA+TGG | + | chr7.2:33797984-33798003 | None:intergenic | 40.0% |
| ! | TGCATCTGTTTGGAATTTCG+AGG | - | chr7.2:33798919-33798938 | MS.gene069016:CDS | 40.0% |
| !! | AGGGAATTTGGTGCATTACA+AGG | - | chr7.2:33799261-33799280 | MS.gene069016:CDS | 40.0% |
| !! | GGTGAGATTAGCTTAGAATG+TGG | - | chr7.2:33799433-33799452 | MS.gene069016:CDS | 40.0% |
| !! | TCCATTTTGAGTCCCCAAAT+TGG | - | chr7.2:33798206-33798225 | MS.gene069016:CDS | 40.0% |
| !! | TGCTTTTTGTCCTTTCTCCA+AGG | + | chr7.2:33798531-33798550 | None:intergenic | 40.0% |
| AAGAGAGTCACCAATTGGAG+TGG | + | chr7.2:33798594-33798613 | None:intergenic | 45.0% | |
| AGTGAGTCTTCCACACTTGA+TGG | - | chr7.2:33798490-33798509 | MS.gene069016:CDS | 45.0% | |
| ATGACCGGTCTTCCTCATAT+GGG | - | chr7.2:33799085-33799104 | MS.gene069016:CDS | 45.0% | |
| CATTCCCATATGAGGAAGAC+CGG | + | chr7.2:33799092-33799111 | None:intergenic | 45.0% | |
| CTATACCCTTCGAGGTTATG+TGG | + | chr7.2:33798296-33798315 | None:intergenic | 45.0% | |
| GTCTCAAGAGAGTCACCAAT+TGG | + | chr7.2:33798599-33798618 | None:intergenic | 45.0% | |
| TCAAGTGTGGAAGACTCACT+TGG | + | chr7.2:33798490-33798509 | None:intergenic | 45.0% | |
| TGAATGTTTGAAGGTAGCCG+AGG | - | chr7.2:33799138-33799157 | MS.gene069016:CDS | 45.0% | |
| ! | ATGATCATAAGTGGCACTGG+CGG | + | chr7.2:33798351-33798370 | None:intergenic | 45.0% |
| ! | GGTGCATTACAAGGCTTTGT+TGG | - | chr7.2:33799270-33799289 | MS.gene069016:CDS | 45.0% |
| !!! | GGGCGGAAAGAAAGTGTTTT+TGG | - | chr7.2:33799051-33799070 | MS.gene069016:CDS | 45.0% |
| CATGGTGAAGCCTTGGAGAA+AGG | - | chr7.2:33798518-33798537 | MS.gene069016:CDS | 50.0% | |
| CCATGTGCTTCCATCAAGTG+TGG | + | chr7.2:33798503-33798522 | None:intergenic | 50.0% | |
| CCTCGGAGACGGTTGTAAAA+TGG | - | chr7.2:33798325-33798344 | MS.gene069016:CDS | 50.0% | |
| CGGTCTTCCTCATATGGGAA+TGG | - | chr7.2:33799090-33799109 | MS.gene069016:CDS | 50.0% | |
| GATGACCGGTCTTCCTCATA+TGG | - | chr7.2:33799084-33799103 | MS.gene069016:CDS | 50.0% | |
| GTTGGACTCCATGCATCACA+GGG | + | chr7.2:33798392-33798411 | None:intergenic | 50.0% | |
| TCTTGTATGCCTCGCCTTTG+AGG | + | chr7.2:33798667-33798686 | None:intergenic | 50.0% | |
| TGGAGAATACCTCAAAGGCG+AGG | - | chr7.2:33798655-33798674 | MS.gene069016:CDS | 50.0% | |
| TGTTGGACTCCATGCATCAC+AGG | + | chr7.2:33798393-33798412 | None:intergenic | 50.0% | |
| ! | CCACACTTGATGGAAGCACA+TGG | - | chr7.2:33798500-33798519 | MS.gene069016:CDS | 50.0% |
| ! | CCATTTTACAACCGTCTCCG+AGG | + | chr7.2:33798328-33798347 | None:intergenic | 50.0% |
| ! | GGAAGCACATGGTGAAGCCT+TGG | - | chr7.2:33798511-33798530 | MS.gene069016:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 33797954 | 33799609 | 33797954 | ID=MS.gene069016 |
| chr7.2 | mRNA | 33797954 | 33799609 | 33797954 | ID=MS.gene069016.t1;Parent=MS.gene069016 |
| chr7.2 | exon | 33797954 | 33799609 | 33797954 | ID=MS.gene069016.t1.exon1;Parent=MS.gene069016.t1 |
| chr7.2 | CDS | 33797954 | 33799609 | 33797954 | ID=cds.MS.gene069016.t1;Parent=MS.gene069016.t1 |
| Gene Sequence |
| Protein sequence |
