Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06961.t1 | XP_024625586.1 | 96.4 | 529 | 10 | 2 | 1 | 528 | 1 | 521 | 2.10E-263 | 917.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06961.t1 | Q9ZWA6 | 44.8 | 446 | 158 | 13 | 57 | 428 | 45 | 476 | 4.5e-81 | 303.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06961.t1 | A0A396H847 | 97.4 | 460 | 11 | 1 | 70 | 528 | 31 | 490 | 3.9e-259 | 903.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene06961.t1 | TF | C2H2 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06961.t1 | MTR_2g099990 | 50.134 | 373 | 115 | 8 | 1 | 355 | 1 | 320 | 3.40e-110 | 336 |
MS.gene06961.t1 | MTR_8g017210 | 53.429 | 350 | 125 | 8 | 47 | 383 | 56 | 380 | 2.45e-108 | 333 |
MS.gene06961.t1 | MTR_1g112270 | 78.363 | 171 | 34 | 1 | 56 | 223 | 47 | 217 | 6.30e-102 | 318 |
MS.gene06961.t1 | MTR_4g059870 | 75.956 | 183 | 35 | 2 | 43 | 224 | 28 | 202 | 4.61e-101 | 313 |
MS.gene06961.t1 | MTR_1g094115 | 78.571 | 168 | 28 | 1 | 53 | 220 | 47 | 206 | 7.01e-101 | 314 |
MS.gene06961.t1 | MTR_1g112270 | 79.167 | 168 | 27 | 1 | 56 | 223 | 47 | 206 | 9.62e-101 | 315 |
MS.gene06961.t1 | MTR_1g016010 | 49.123 | 342 | 115 | 8 | 42 | 376 | 29 | 318 | 4.14e-99 | 307 |
MS.gene06961.t1 | MTR_2g099990 | 54.545 | 286 | 80 | 5 | 85 | 355 | 1 | 251 | 6.99e-98 | 302 |
MS.gene06961.t1 | MTR_2g090745 | 83.226 | 155 | 26 | 0 | 71 | 225 | 17 | 171 | 2.47e-97 | 301 |
MS.gene06961.t1 | MTR_2g093960 | 73.410 | 173 | 37 | 2 | 53 | 224 | 32 | 196 | 3.00e-95 | 296 |
MS.gene06961.t1 | MTR_1g094115 | 69.643 | 168 | 26 | 1 | 53 | 220 | 47 | 189 | 2.13e-86 | 276 |
MS.gene06961.t1 | MTR_2g017720 | 75.439 | 114 | 23 | 1 | 71 | 184 | 323 | 431 | 9.13e-54 | 187 |
MS.gene06961.t1 | MTR_3g102000 | 65.657 | 99 | 27 | 2 | 88 | 182 | 36 | 131 | 3.23e-38 | 140 |
MS.gene06961.t1 | MTR_5g030560 | 80.000 | 45 | 9 | 0 | 71 | 115 | 16 | 60 | 5.08e-20 | 84.7 |
MS.gene06961.t1 | MTR_1g093095 | 33.537 | 164 | 86 | 7 | 84 | 226 | 109 | 270 | 1.61e-19 | 89.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene06961.t1 | AT3G50700 | 51.762 | 369 | 133 | 8 | 32 | 372 | 6 | 357 | 2.37e-110 | 336 |
MS.gene06961.t1 | AT1G03840 | 81.503 | 173 | 24 | 1 | 53 | 225 | 41 | 205 | 8.83e-104 | 321 |
MS.gene06961.t1 | AT1G03840 | 81.503 | 173 | 22 | 1 | 53 | 225 | 41 | 203 | 3.40e-103 | 319 |
MS.gene06961.t1 | AT5G66730 | 73.096 | 197 | 40 | 2 | 32 | 223 | 6 | 194 | 1.56e-102 | 317 |
MS.gene06961.t1 | AT5G44160 | 70.531 | 207 | 45 | 3 | 53 | 251 | 37 | 235 | 1.67e-101 | 313 |
MS.gene06961.t1 | AT1G55110 | 64.629 | 229 | 51 | 4 | 1 | 224 | 24 | 227 | 1.54e-100 | 311 |
MS.gene06961.t1 | AT1G55110 | 64.629 | 229 | 51 | 4 | 1 | 224 | 24 | 227 | 1.54e-100 | 311 |
MS.gene06961.t1 | AT1G55110 | 64.629 | 229 | 51 | 4 | 1 | 224 | 24 | 227 | 1.54e-100 | 311 |
MS.gene06961.t1 | AT1G14580 | 77.778 | 171 | 30 | 1 | 53 | 223 | 53 | 215 | 1.54e-100 | 311 |
MS.gene06961.t1 | AT1G14580 | 77.778 | 171 | 30 | 1 | 53 | 223 | 53 | 215 | 1.54e-100 | 311 |
MS.gene06961.t1 | AT1G14580 | 77.778 | 171 | 30 | 1 | 53 | 223 | 67 | 229 | 2.83e-100 | 311 |
MS.gene06961.t1 | AT2G02070 | 76.966 | 178 | 33 | 1 | 53 | 230 | 52 | 221 | 4.03e-100 | 314 |
MS.gene06961.t1 | AT2G02070 | 76.966 | 178 | 33 | 1 | 53 | 230 | 52 | 221 | 4.03e-100 | 314 |
MS.gene06961.t1 | AT2G02080 | 77.193 | 171 | 31 | 1 | 53 | 223 | 54 | 216 | 4.32e-100 | 311 |
MS.gene06961.t1 | AT2G02080 | 77.193 | 171 | 31 | 1 | 53 | 223 | 54 | 216 | 4.32e-100 | 311 |
MS.gene06961.t1 | AT2G02080 | 77.193 | 171 | 31 | 1 | 53 | 223 | 54 | 216 | 4.32e-100 | 311 |
MS.gene06961.t1 | AT2G02080 | 77.193 | 171 | 31 | 1 | 53 | 223 | 54 | 216 | 4.32e-100 | 311 |
MS.gene06961.t1 | AT5G03150 | 79.769 | 173 | 26 | 2 | 53 | 224 | 53 | 217 | 1.31e-99 | 310 |
MS.gene06961.t1 | AT5G44160 | 72.396 | 192 | 45 | 2 | 68 | 251 | 5 | 196 | 1.87e-98 | 305 |
MS.gene06961.t1 | AT3G45260 | 77.326 | 172 | 30 | 2 | 53 | 223 | 39 | 202 | 3.35e-98 | 305 |
MS.gene06961.t1 | AT3G45260 | 77.326 | 172 | 30 | 2 | 53 | 223 | 39 | 202 | 3.35e-98 | 305 |
MS.gene06961.t1 | AT4G02670 | 64.530 | 234 | 62 | 6 | 8 | 237 | 19 | 235 | 6.67e-98 | 302 |
MS.gene06961.t1 | AT4G02670 | 64.530 | 234 | 62 | 6 | 8 | 237 | 17 | 233 | 6.91e-98 | 302 |
MS.gene06961.t1 | AT3G13810 | 65.179 | 224 | 64 | 3 | 1 | 223 | 4 | 214 | 1.79e-97 | 304 |
MS.gene06961.t1 | AT3G13810 | 65.179 | 224 | 64 | 3 | 1 | 223 | 23 | 233 | 2.23e-97 | 305 |
MS.gene06961.t1 | AT3G13810 | 65.179 | 224 | 64 | 3 | 1 | 223 | 23 | 233 | 2.23e-97 | 305 |
MS.gene06961.t1 | AT3G13810 | 65.179 | 224 | 64 | 3 | 1 | 223 | 18 | 228 | 2.42e-97 | 304 |
MS.gene06961.t1 | AT5G60470 | 69.841 | 189 | 48 | 2 | 37 | 224 | 24 | 204 | 1.80e-95 | 298 |
MS.gene06961.t1 | AT5G60470 | 69.841 | 189 | 48 | 2 | 37 | 224 | 28 | 208 | 1.82e-95 | 298 |
MS.gene06961.t1 | AT3G13810 | 82.692 | 156 | 26 | 1 | 69 | 223 | 65 | 220 | 4.98e-94 | 295 |
MS.gene06961.t1 | AT3G13810 | 82.692 | 156 | 26 | 1 | 69 | 223 | 79 | 234 | 5.76e-94 | 296 |
MS.gene06961.t1 | AT5G60470 | 73.494 | 166 | 43 | 1 | 59 | 223 | 33 | 198 | 3.50e-91 | 286 |
MS.gene06961.t1 | AT2G02080 | 81.295 | 139 | 26 | 0 | 85 | 223 | 1 | 139 | 9.25e-89 | 280 |
MS.gene06961.t1 | AT2G02080 | 81.295 | 139 | 26 | 0 | 85 | 223 | 1 | 139 | 9.25e-89 | 280 |
MS.gene06961.t1 | AT2G01940 | 59.887 | 177 | 61 | 3 | 42 | 216 | 33 | 201 | 1.72e-70 | 233 |
MS.gene06961.t1 | AT1G68130 | 62.805 | 164 | 51 | 3 | 53 | 214 | 41 | 196 | 4.26e-70 | 231 |
MS.gene06961.t1 | AT1G25250 | 60.843 | 166 | 54 | 3 | 52 | 214 | 32 | 189 | 6.84e-69 | 226 |
MS.gene06961.t1 | AT1G25250 | 64.430 | 149 | 50 | 2 | 69 | 214 | 18 | 166 | 7.35e-68 | 223 |
MS.gene06961.t1 | AT2G01940 | 58.989 | 178 | 62 | 4 | 42 | 216 | 33 | 202 | 1.37e-66 | 222 |
MS.gene06961.t1 | AT1G68130 | 64.545 | 110 | 37 | 2 | 107 | 214 | 1 | 110 | 2.93e-46 | 165 |
MS.gene06961.t1 | AT2G01940 | 64.286 | 112 | 38 | 2 | 107 | 216 | 1 | 112 | 5.02e-46 | 165 |
MS.gene06961.t1 | AT1G25250 | 62.162 | 111 | 39 | 2 | 107 | 214 | 1 | 111 | 7.34e-45 | 160 |
MS.gene06961.t1 | AT1G34370 | 33.333 | 171 | 89 | 5 | 57 | 213 | 12 | 171 | 8.48e-24 | 102 |
MS.gene06961.t1 | AT5G22890 | 36.000 | 150 | 82 | 4 | 75 | 210 | 202 | 351 | 1.01e-23 | 103 |
MS.gene06961.t1 | AT1G34370 | 33.140 | 172 | 90 | 5 | 56 | 213 | 221 | 381 | 2.48e-23 | 103 |
MS.gene06961.t1 | AT1G34370 | 33.140 | 172 | 90 | 5 | 56 | 213 | 221 | 381 | 2.48e-23 | 103 |
MS.gene06961.t1 | AT3G20880 | 37.143 | 140 | 76 | 6 | 84 | 213 | 250 | 387 | 1.22e-19 | 91.7 |
MS.gene06961.t1 | AT1G51220 | 33.775 | 151 | 84 | 5 | 72 | 213 | 166 | 309 | 1.55e-19 | 90.5 |
MS.gene06961.t1 | AT3G57670 | 34.437 | 151 | 83 | 5 | 72 | 213 | 205 | 348 | 3.95e-19 | 89.7 |
MS.gene06961.t1 | AT1G13290 | 35.862 | 145 | 79 | 7 | 84 | 216 | 95 | 237 | 5.78e-19 | 88.2 |
MS.gene06961.t1 | AT1G08290 | 31.461 | 178 | 98 | 8 | 53 | 213 | 142 | 312 | 1.17e-17 | 84.7 |
MS.gene06961.t1 | AT1G34790 | 31.169 | 154 | 94 | 5 | 70 | 213 | 125 | 276 | 1.18e-16 | 81.3 |
Find 113 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTAGTCCTAATCATGTTTC+TGG | 0.126378 | 7.1:+5475914 | MS.gene06961:CDS |
ATTATCTCCAACAACATTAA+TGG | 0.225501 | 7.1:+5474662 | MS.gene06961:CDS |
ATTGAAATGTCAAATATTTC+AGG | 0.250060 | 7.1:+5473637 | None:intergenic |
TGCATTTGGCTTTGCAAGTT+TGG | 0.264117 | 7.1:-5475494 | None:intergenic |
CAGCAATGGAGAAATCAATT+TGG | 0.264385 | 7.1:+5476350 | MS.gene06961:CDS |
ATTGCTGTACCTAGAAAATA+TGG | 0.277676 | 7.1:-5475024 | None:intergenic |
GTCCATGATTTCTTGGGAAT+TGG | 0.293303 | 7.1:+5476217 | MS.gene06961:CDS |
GGCAACAGTCCATGATTTCT+TGG | 0.325473 | 7.1:+5476210 | MS.gene06961:CDS |
TTGGAGCATGTTCTTGAGTT+GGG | 0.332417 | 7.1:-5475607 | None:intergenic |
GTAATTGAAGCTGTTGGAAT+TGG | 0.337918 | 7.1:-5475744 | None:intergenic |
GAATATTTGCCTGGAGTTCC+AGG | 0.357558 | 7.1:-5473817 | None:intergenic |
TCTACAATGAATAATGATAT+TGG | 0.357969 | 7.1:+5476109 | MS.gene06961:CDS |
AATAATGATATTGGAATGTT+TGG | 0.379983 | 7.1:+5476118 | MS.gene06961:CDS |
TTTGTTGCCATTAATGTTGT+TGG | 0.382808 | 7.1:-5474669 | None:intergenic |
TCTGAGGAAGTGTTGGAAAC+AGG | 0.383083 | 7.1:-5475545 | None:intergenic |
GCAAACATGGCGAGAAGAAA+TGG | 0.383718 | 7.1:+5474904 | MS.gene06961:CDS |
AGCAATGGAGAAATCAATTT+GGG | 0.385884 | 7.1:+5476351 | MS.gene06961:CDS |
GTTCATAAGAGGGTTGGTTT+TGG | 0.388862 | 7.1:-5475958 | None:intergenic |
AAGTGCAGATGTGAAGAAAA+AGG | 0.388942 | 7.1:+5474794 | MS.gene06961:CDS |
CGTGCATTAGGTGACCTTAC+TGG | 0.399967 | 7.1:+5474861 | MS.gene06961:CDS |
AGTGGAACCATTGCTATTGC+AGG | 0.405406 | 7.1:-5473761 | None:intergenic |
CACAATCCAGCTCGTGCATT+AGG | 0.407149 | 7.1:+5474849 | MS.gene06961:CDS |
AATCTCAATGACTCAAGTTC+AGG | 0.409366 | 7.1:+5473727 | MS.gene06961:CDS |
AAGAAGAAAAGAAACCTTCC+TGG | 0.411122 | 7.1:+5473799 | MS.gene06961:CDS |
ATTTCTTCTCGCCATGTTTG+CGG | 0.411811 | 7.1:-5474902 | None:intergenic |
GCATGCCACTGGTTAATCCT+TGG | 0.413966 | 7.1:-5475469 | None:intergenic |
TAGAGATAGGATCATGCATT+TGG | 0.417757 | 7.1:-5475508 | None:intergenic |
TGGATTAAAGTGTTCATAAG+AGG | 0.422907 | 7.1:-5475969 | None:intergenic |
TGAACCACCGCAACAAAGAT+TGG | 0.429359 | 7.1:+5476261 | MS.gene06961:CDS |
TTTAGCGGCATGGTAGAGAT+AGG | 0.433827 | 7.1:-5475521 | None:intergenic |
AGTATAGTTGAATATTTGCC+TGG | 0.440380 | 7.1:-5473826 | None:intergenic |
ACCAGAAAACATGTGGTACT+AGG | 0.442303 | 7.1:+5474979 | MS.gene06961:CDS |
GACTCAAGTTCAGGTCCATC+TGG | 0.442408 | 7.1:+5473736 | MS.gene06961:CDS |
CATGATTTCTTGGGAATTGG+AGG | 0.445123 | 7.1:+5476220 | MS.gene06961:CDS |
TTCGGTGTAACTGAAGATTC+TGG | 0.450568 | 7.1:-5474734 | None:intergenic |
ATGGAAGATTGTGACCTCTT+CGG | 0.458250 | 7.1:-5474752 | None:intergenic |
GCAACAGTCCATGATTTCTT+GGG | 0.459975 | 7.1:+5476211 | MS.gene06961:CDS |
CATGCCACCACATGCATTGT+TGG | 0.462483 | 7.1:-5475645 | None:intergenic |
CTCCAATTCCCAAGAAATCA+TGG | 0.464360 | 7.1:-5476219 | None:intergenic |
AGTTGAAGGGTTGAAGAAGA+TGG | 0.465582 | 7.1:-5475716 | None:intergenic |
TCAAATATTTCAGGTGATGA+AGG | 0.466760 | 7.1:+5473646 | MS.gene06961:CDS |
ATAGAACCAGAAACATGATT+AGG | 0.468762 | 7.1:-5475920 | None:intergenic |
GGTGCTACTGCAAGCAATAG+TGG | 0.468938 | 7.1:+5475851 | MS.gene06961:CDS |
TCTAACATGGCTGGTGTTAG+TGG | 0.470215 | 7.1:+5476007 | MS.gene06961:CDS |
GATACGCTGTTCAATCAGAT+TGG | 0.476113 | 7.1:+5474949 | MS.gene06961:CDS |
TGGAATTGGAACTAAGTTGA+AGG | 0.481061 | 7.1:-5475730 | None:intergenic |
GTTGGAGCATGTTCTTGAGT+TGG | 0.484302 | 7.1:-5475608 | None:intergenic |
AATTGTTCAAATTTGATACA+TGG | 0.491018 | 7.1:+5476178 | MS.gene06961:CDS |
AGCATTAAGTCAACAGAGGT+TGG | 0.491230 | 7.1:+5476285 | MS.gene06961:CDS |
AGAAACCTTCCTGGAACTCC+AGG | 0.494464 | 7.1:+5473808 | MS.gene06961:CDS |
GTTTAATTCTGAGGAAGTGT+TGG | 0.503695 | 7.1:-5475552 | None:intergenic |
CAAGTTTGGTGGCATGCCAC+TGG | 0.504812 | 7.1:-5475480 | None:intergenic |
GATATTGGAATGTTTGGTCA+TGG | 0.511947 | 7.1:+5476124 | MS.gene06961:CDS |
ACAATCTTCCATGGAAACTT+AGG | 0.513491 | 7.1:+5474763 | MS.gene06961:CDS |
TAAAGTGTTCATAAGAGGGT+TGG | 0.514305 | 7.1:-5475964 | None:intergenic |
GATGAAGAATGTTGCACAAG+AGG | 0.514880 | 7.1:+5476150 | MS.gene06961:CDS |
TTGGTTGATCTGAATGATGT+TGG | 0.518626 | 7.1:-5475626 | None:intergenic |
CGCTGTTCAATCAGATTGGA+AGG | 0.519515 | 7.1:+5474953 | MS.gene06961:CDS |
GTTCTTTGCCTAAGTTTCCA+TGG | 0.520812 | 7.1:-5474771 | None:intergenic |
ATTGAAGTAATTGAAGCTGT+TGG | 0.522656 | 7.1:-5475750 | None:intergenic |
GAAAAGCTTTGTTAGTAGCA+TGG | 0.526473 | 7.1:+5475892 | MS.gene06961:CDS |
TGGAGGACTAATTGCTGGCA+TGG | 0.527954 | 7.1:+5475784 | MS.gene06961:CDS |
CCAGAAAACATGTGGTACTA+GGG | 0.530598 | 7.1:+5474980 | MS.gene06961:CDS |
ATTTGGCTTTGCAAGTTTGG+TGG | 0.531585 | 7.1:-5475491 | None:intergenic |
AGCTTCTCCTCAGGAAACAA+TGG | 0.532782 | 7.1:+5473670 | MS.gene06961:CDS |
TGGTGAACACATGATGGCTC+AGG | 0.534078 | 7.1:-5474828 | None:intergenic |
TTCTTCTCCATTGTTTCCTG+AGG | 0.534803 | 7.1:-5473677 | None:intergenic |
ATAGTCATTGTTTAATTCTG+AGG | 0.543313 | 7.1:-5475561 | None:intergenic |
GCTTCCAATCTTTGTTGCGG+TGG | 0.546646 | 7.1:-5476265 | None:intergenic |
GATGAAGGAAGCTTCTCCTC+AGG | 0.547390 | 7.1:+5473661 | MS.gene06961:CDS |
GGTTGAAGAAGATGGAGGCA+AGG | 0.548129 | 7.1:-5475708 | None:intergenic |
ATGGCTGGTGTTAGTGGTGG+AGG | 0.549455 | 7.1:+5476013 | MS.gene06961:CDS |
TGCTGGCATGGCTCAAATGT+CGG | 0.549729 | 7.1:+5475796 | MS.gene06961:CDS |
AGGTCACCTAATGCACGAGC+TGG | 0.556111 | 7.1:-5474855 | None:intergenic |
GGCATGTTCTCAACTAGTGC+AGG | 0.558296 | 7.1:+5475662 | MS.gene06961:CDS |
AATGCTTCCAATCTTTGTTG+CGG | 0.559264 | 7.1:-5476268 | None:intergenic |
TCATCATCATCTTCCACATG+AGG | 0.560330 | 7.1:+5476324 | MS.gene06961:CDS |
TGGAGCATGTTCTTGAGTTG+GGG | 0.560364 | 7.1:-5475606 | None:intergenic |
CATGAATTATCTAACATGGC+TGG | 0.563778 | 7.1:+5475998 | MS.gene06961:CDS |
TTGCTATTGCAGGCACCAGA+TGG | 0.567581 | 7.1:-5473751 | None:intergenic |
GGATTAAAGTGTTCATAAGA+GGG | 0.569779 | 7.1:-5475968 | None:intergenic |
GAAGAGGTCACAATCTTCCA+TGG | 0.574717 | 7.1:+5474754 | MS.gene06961:CDS |
TCCATTGCTGAATCCTCATG+TGG | 0.577321 | 7.1:-5476337 | None:intergenic |
TGCATCACAGAATGCTCTGT+GGG | 0.579430 | 7.1:-5475420 | None:intergenic |
AATAGATCCTACTGCTGAAG+TGG | 0.580873 | 7.1:+5474635 | MS.gene06961:intron |
AGGGAATACAAATGTGATTG+TGG | 0.590905 | 7.1:+5474999 | MS.gene06961:CDS |
GTGCTACTGCAAGCAATAGT+GGG | 0.592488 | 7.1:+5475852 | MS.gene06961:CDS |
TTAGATAATTCATGCTGCAG+TGG | 0.592945 | 7.1:-5475989 | None:intergenic |
GGAATTGGAACTAAGTTGAA+GGG | 0.596686 | 7.1:-5475729 | None:intergenic |
AATGCAACCACTTCAGCAGT+AGG | 0.598028 | 7.1:-5474642 | None:intergenic |
TGAAGGGTTGAAGAAGATGG+AGG | 0.598478 | 7.1:-5475713 | None:intergenic |
AGAAGTTAGTAAGCAGCAAG+AGG | 0.608407 | 7.1:+5473696 | MS.gene06961:CDS |
TCCACATGAGGATTCAGCAA+TGG | 0.616123 | 7.1:+5476336 | MS.gene06961:CDS |
ATTTGCCTGGAGTTCCAGGA+AGG | 0.618836 | 7.1:-5473813 | None:intergenic |
CTAATGCACGAGCTGGATTG+TGG | 0.622870 | 7.1:-5474848 | None:intergenic |
TCTGGTGCCTGCAATAGCAA+TGG | 0.623066 | 7.1:+5473754 | MS.gene06961:CDS |
AATCTTCAGTTACACCGAAG+AGG | 0.641075 | 7.1:+5474738 | MS.gene06961:CDS |
ATGCAACAAGGGATTTCAGA+GGG | 0.641353 | 7.1:+5474710 | MS.gene06961:CDS |
AACATGGCTGGTGTTAGTGG+TGG | 0.642397 | 7.1:+5476010 | MS.gene06961:CDS |
TCAACCAACAATGCATGTGG+TGG | 0.656711 | 7.1:+5475641 | MS.gene06961:CDS |
TATGCAACAAGGGATTTCAG+AGG | 0.657445 | 7.1:+5474709 | MS.gene06961:CDS |
GGATTGTGGTGAACACATGA+TGG | 0.659836 | 7.1:-5474834 | None:intergenic |
AGATCAACCAACAATGCATG+TGG | 0.667821 | 7.1:+5475638 | MS.gene06961:CDS |
GCAGCATGAATTATCTAACA+TGG | 0.668171 | 7.1:+5475994 | MS.gene06961:CDS |
TGGAAGCATTAAGTCAACAG+AGG | 0.675968 | 7.1:+5476281 | MS.gene06961:CDS |
TTTGATACATGGAAGTGATG+TGG | 0.683521 | 7.1:+5476189 | MS.gene06961:CDS |
ATGCATCACAGAATGCTCTG+TGG | 0.684328 | 7.1:-5475421 | None:intergenic |
GTGTGTGAGATATGCAACAA+GGG | 0.694352 | 7.1:+5474699 | MS.gene06961:CDS |
GAAAACAACAGAGTAAACCA+AGG | 0.707069 | 7.1:+5475452 | MS.gene06961:CDS |
AAGGCTCACCAGAAAACATG+TGG | 0.716558 | 7.1:+5474972 | MS.gene06961:CDS |
GTAAACCAAGGATTAACCAG+TGG | 0.716826 | 7.1:+5475464 | MS.gene06961:CDS |
GGTGAACACATGATGGCTCA+GGG | 0.717782 | 7.1:-5474827 | None:intergenic |
TGTGTGTGAGATATGCAACA+AGG | 0.725588 | 7.1:+5474698 | MS.gene06961:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAATTAATAATTTGCATAAT+TGG | + | chr7.1:5475213-5475232 | MS.gene06961:intron | 10.0% |
!! | AAAAAAACTTATAGCTTATA+CGG | - | chr7.1:5474219-5474238 | None:intergenic | 15.0% |
!!! | AAAATATGTTTTCCATTTTT+AGG | - | chr7.1:5475160-5475179 | None:intergenic | 15.0% |
!!! | ATTTTATATAGTTTCTCTAA+TGG | + | chr7.1:5474081-5474100 | MS.gene06961:intron | 15.0% |
!! | AAAATACATCATCCATTAAT+CGG | - | chr7.1:5474611-5474630 | None:intergenic | 20.0% |
!! | AATAATGATATTGGAATGTT+TGG | + | chr7.1:5476118-5476137 | MS.gene06961:CDS | 20.0% |
!! | AATTGTTCAAATTTGATACA+TGG | + | chr7.1:5476178-5476197 | MS.gene06961:CDS | 20.0% |
!! | GCTAGTAACTTATAAAATAA+AGG | - | chr7.1:5474558-5474577 | None:intergenic | 20.0% |
!! | TACTTCAATGACAATAAAAA+TGG | + | chr7.1:5475764-5475783 | MS.gene06961:CDS | 20.0% |
!! | TCTACAATGAATAATGATAT+TGG | + | chr7.1:5476109-5476128 | MS.gene06961:CDS | 20.0% |
!!! | TAATATTTAGAATGCATGTT+TGG | - | chr7.1:5475335-5475354 | None:intergenic | 20.0% |
!!! | TTTCTTTTTAATTACCTCAT+TGG | - | chr7.1:5474448-5474467 | None:intergenic | 20.0% |
! | AAAAATTGAAGTTAGGACTT+AGG | - | chr7.1:5473852-5473871 | None:intergenic | 25.0% |
! | AATAAGCTGAAAACATCTTA+TGG | + | chr7.1:5474266-5474285 | MS.gene06961:intron | 25.0% |
! | AATTGGATTGAAATCGAATT+TGG | + | chr7.1:5475230-5475249 | MS.gene06961:intron | 25.0% |
! | ATAGTCATTGTTTAATTCTG+AGG | - | chr7.1:5475564-5475583 | None:intergenic | 25.0% |
! | ATTATCTCCAACAACATTAA+TGG | + | chr7.1:5474662-5474681 | MS.gene06961:CDS | 25.0% |
! | CTGCAATAAAAATTGAAGTT+AGG | - | chr7.1:5473859-5473878 | None:intergenic | 25.0% |
! | GCATATTATTGCTATGTATA+TGG | + | chr7.1:5474576-5474595 | MS.gene06961:intron | 25.0% |
! | TCTAGGCAAATAAAAATCTT+TGG | + | chr7.1:5473919-5473938 | MS.gene06961:intron | 25.0% |
! | TGAAACAAAGTGAATACAAT+AGG | + | chr7.1:5475134-5475153 | MS.gene06961:intron | 25.0% |
! | TTAGATACTTCTTAAGAGTA+AGG | - | chr7.1:5474495-5474514 | None:intergenic | 25.0% |
! | TTATCACTACTTAAAGATGA+AGG | - | chr7.1:5474393-5474412 | None:intergenic | 25.0% |
! | TTCAAATAAGTCAATTTCAG+CGG | + | chr7.1:5474356-5474375 | MS.gene06961:intron | 25.0% |
! | TTCAATGACAATAAAAATGG+AGG | + | chr7.1:5475767-5475786 | MS.gene06961:CDS | 25.0% |
! | TTTGTTACAAATATTTGTGC+AGG | + | chr7.1:5475084-5475103 | MS.gene06961:intron | 25.0% |
!!! | GTTGTTCTTTTTGAAACAAT+TGG | - | chr7.1:5476051-5476070 | None:intergenic | 25.0% |
AGCAATGGAGAAATCAATTT+GGG | + | chr7.1:5476351-5476370 | MS.gene06961:CDS | 30.0% | |
AGTATAGTTGAATATTTGCC+TGG | - | chr7.1:5473829-5473848 | None:intergenic | 30.0% | |
ATAGAACCAGAAACATGATT+AGG | - | chr7.1:5475923-5475942 | None:intergenic | 30.0% | |
ATTGAAGTAATTGAAGCTGT+TGG | - | chr7.1:5475753-5475772 | None:intergenic | 30.0% | |
ATTGCTGTACCTAGAAAATA+TGG | - | chr7.1:5475027-5475046 | None:intergenic | 30.0% | |
CCTGTGTTATACAGAAAAAT+AGG | - | chr7.1:5475384-5475403 | None:intergenic | 30.0% | |
GAATACAATAGGCCTAAAAA+TGG | + | chr7.1:5475145-5475164 | MS.gene06961:intron | 30.0% | |
TATACTCCTAACTATACTCT+AGG | + | chr7.1:5473902-5473921 | MS.gene06961:intron | 30.0% | |
TATTTGCCTAGAGTATAGTT+AGG | - | chr7.1:5473911-5473930 | None:intergenic | 30.0% | |
TTATTGCTATGTATATGGCA+AGG | + | chr7.1:5474581-5474600 | MS.gene06961:intron | 30.0% | |
TTTGGATGAACAGCTTAATT+AGG | + | chr7.1:5474151-5474170 | MS.gene06961:intron | 30.0% | |
TTTGTTGCCATTAATGTTGT+TGG | - | chr7.1:5474672-5474691 | None:intergenic | 30.0% | |
! | ACTTAAAGATGAAGGTCTTT+TGG | - | chr7.1:5474385-5474404 | None:intergenic | 30.0% |
! | ATTGTGGAACCATATTTTCT+AGG | + | chr7.1:5475015-5475034 | MS.gene06961:CDS | 30.0% |
! | CTTAAAGATGAAGGTCTTTT+GGG | - | chr7.1:5474384-5474403 | None:intergenic | 30.0% |
! | GGATTAAAGTGTTCATAAGA+GGG | - | chr7.1:5475971-5475990 | None:intergenic | 30.0% |
! | TCAAATATTTCAGGTGATGA+AGG | + | chr7.1:5473646-5473665 | MS.gene06961:CDS | 30.0% |
! | TGGATTAAAGTGTTCATAAG+AGG | - | chr7.1:5475972-5475991 | None:intergenic | 30.0% |
! | TTAAAGATGAAGGTCTTTTG+GGG | - | chr7.1:5474383-5474402 | None:intergenic | 30.0% |
!! | CCTATTTTTCTGTATAACAC+AGG | + | chr7.1:5475381-5475400 | MS.gene06961:intron | 30.0% |
!!! | AATGTTTTTTGATGCCAGTA+AGG | - | chr7.1:5474878-5474897 | None:intergenic | 30.0% |
!!! | CTTATTTTGCTGTTGATTAG+TGG | - | chr7.1:5473782-5473801 | None:intergenic | 30.0% |
!!! | TGCTTTTTTTGAGAATTGAG+AGG | + | chr7.1:5474013-5474032 | MS.gene06961:intron | 30.0% |
AAAAATGGAGGACTAATTGC+TGG | + | chr7.1:5475779-5475798 | MS.gene06961:CDS | 35.0% | |
AACATTCAAGCTATCCAATG+AGG | + | chr7.1:5474431-5474450 | MS.gene06961:intron | 35.0% | |
AAGAAGAAAAGAAACCTTCC+TGG | + | chr7.1:5473799-5473818 | MS.gene06961:CDS | 35.0% | |
AAGTGCAGATGTGAAGAAAA+AGG | + | chr7.1:5474794-5474813 | MS.gene06961:CDS | 35.0% | |
AATCTCAATGACTCAAGTTC+AGG | + | chr7.1:5473727-5473746 | MS.gene06961:CDS | 35.0% | |
AATGCTTCCAATCTTTGTTG+CGG | - | chr7.1:5476271-5476290 | None:intergenic | 35.0% | |
ACAATCTTCCATGGAAACTT+AGG | + | chr7.1:5474763-5474782 | MS.gene06961:CDS | 35.0% | |
ACTAATCAACACTTCAGTGA+TGG | + | chr7.1:5473942-5473961 | MS.gene06961:intron | 35.0% | |
ACTACAAAAAGCAGCACAAA+TGG | + | chr7.1:5475829-5475848 | MS.gene06961:CDS | 35.0% | |
AGGGAATACAAATGTGATTG+TGG | + | chr7.1:5474999-5475018 | MS.gene06961:CDS | 35.0% | |
AGTCTCACACATACTTATGT+TGG | + | chr7.1:5474325-5474344 | MS.gene06961:intron | 35.0% | |
CAGCAATGGAGAAATCAATT+TGG | + | chr7.1:5476350-5476369 | MS.gene06961:CDS | 35.0% | |
CATGAATTATCTAACATGGC+TGG | + | chr7.1:5475998-5476017 | MS.gene06961:CDS | 35.0% | |
CATTGGATAGCTTGAATGTT+AGG | - | chr7.1:5474431-5474450 | None:intergenic | 35.0% | |
CTACAAAAAGCAGCACAAAT+GGG | + | chr7.1:5475830-5475849 | MS.gene06961:CDS | 35.0% | |
GAAAACAACAGAGTAAACCA+AGG | + | chr7.1:5475452-5475471 | MS.gene06961:CDS | 35.0% | |
GATATTGGAATGTTTGGTCA+TGG | + | chr7.1:5476124-5476143 | MS.gene06961:CDS | 35.0% | |
GCAGCATGAATTATCTAACA+TGG | + | chr7.1:5475994-5476013 | MS.gene06961:CDS | 35.0% | |
GCTTAAACAATAGCCATGTT+TGG | + | chr7.1:5474133-5474152 | MS.gene06961:intron | 35.0% | |
GTAATTGAAGCTGTTGGAAT+TGG | - | chr7.1:5475747-5475766 | None:intergenic | 35.0% | |
GTTAGTCCTAATCATGTTTC+TGG | + | chr7.1:5475914-5475933 | MS.gene06961:CDS | 35.0% | |
TAGAGATAGGATCATGCATT+TGG | - | chr7.1:5475511-5475530 | None:intergenic | 35.0% | |
TTAAGCTGTTCATCCAAACA+TGG | - | chr7.1:5474149-5474168 | None:intergenic | 35.0% | |
TTAGATAATTCATGCTGCAG+TGG | - | chr7.1:5475992-5476011 | None:intergenic | 35.0% | |
TTCTCTAATGGTCAAACTCT+TGG | + | chr7.1:5474093-5474112 | MS.gene06961:intron | 35.0% | |
TTGGTTGATCTGAATGATGT+TGG | - | chr7.1:5475629-5475648 | None:intergenic | 35.0% | |
TTTGATACATGGAAGTGATG+TGG | + | chr7.1:5476189-5476208 | MS.gene06961:CDS | 35.0% | |
! | AACAAAGCTTTTCTGCATCA+TGG | - | chr7.1:5475885-5475904 | None:intergenic | 35.0% |
! | AGAATGCATGTTTGGAATCA+GGG | - | chr7.1:5475327-5475346 | None:intergenic | 35.0% |
! | GGAATTGGAACTAAGTTGAA+GGG | - | chr7.1:5475732-5475751 | None:intergenic | 35.0% |
! | GGGATCTTAGTGAGTTTTTA+GGG | - | chr7.1:5475589-5475608 | None:intergenic | 35.0% |
! | GTTTAATTCTGAGGAAGTGT+TGG | - | chr7.1:5475555-5475574 | None:intergenic | 35.0% |
! | TAAAGTGTTCATAAGAGGGT+TGG | - | chr7.1:5475967-5475986 | None:intergenic | 35.0% |
! | TAGAATGCATGTTTGGAATC+AGG | - | chr7.1:5475328-5475347 | None:intergenic | 35.0% |
! | TGGAATTGGAACTAAGTTGA+AGG | - | chr7.1:5475733-5475752 | None:intergenic | 35.0% |
!! | AAACATTTTAGCCGCAAACA+TGG | + | chr7.1:5474891-5474910 | MS.gene06961:CDS | 35.0% |
!! | GAAAAGCTTTGTTAGTAGCA+TGG | + | chr7.1:5475892-5475911 | MS.gene06961:CDS | 35.0% |
!!! | TGCTGCTTTTTGTAGTAAAG+CGG | - | chr7.1:5475825-5475844 | None:intergenic | 35.0% |
!!! | TTTTCCGCCTTATTTTCACA+CGG | + | chr7.1:5475058-5475077 | MS.gene06961:intron | 35.0% |
AATAGATCCTACTGCTGAAG+TGG | + | chr7.1:5474635-5474654 | MS.gene06961:intron | 40.0% | |
AATCTTCAGTTACACCGAAG+AGG | + | chr7.1:5474738-5474757 | MS.gene06961:CDS | 40.0% | |
ACCAGAAAACATGTGGTACT+AGG | + | chr7.1:5474979-5474998 | MS.gene06961:CDS | 40.0% | |
AGAAGTTAGTAAGCAGCAAG+AGG | + | chr7.1:5473696-5473715 | MS.gene06961:CDS | 40.0% | |
AGATCAACCAACAATGCATG+TGG | + | chr7.1:5475638-5475657 | MS.gene06961:CDS | 40.0% | |
AGCATTAAGTCAACAGAGGT+TGG | + | chr7.1:5476285-5476304 | MS.gene06961:CDS | 40.0% | |
AGTTGAAGGGTTGAAGAAGA+TGG | - | chr7.1:5475719-5475738 | None:intergenic | 40.0% | |
ATGCAACAAGGGATTTCAGA+GGG | + | chr7.1:5474710-5474729 | MS.gene06961:CDS | 40.0% | |
ATGGAAGATTGTGACCTCTT+CGG | - | chr7.1:5474755-5474774 | None:intergenic | 40.0% | |
ATTTCTTCTCGCCATGTTTG+CGG | - | chr7.1:5474905-5474924 | None:intergenic | 40.0% | |
CAAATCGCCGTGTGAAAATA+AGG | - | chr7.1:5475068-5475087 | None:intergenic | 40.0% | |
CATGATTTCTTGGGAATTGG+AGG | + | chr7.1:5476220-5476239 | MS.gene06961:CDS | 40.0% | |
CCAGAAAACATGTGGTACTA+GGG | + | chr7.1:5474980-5474999 | MS.gene06961:CDS | 40.0% | |
CTCCAATTCCCAAGAAATCA+TGG | - | chr7.1:5476222-5476241 | None:intergenic | 40.0% | |
GATACGCTGTTCAATCAGAT+TGG | + | chr7.1:5474949-5474968 | MS.gene06961:CDS | 40.0% | |
GATGAAGAATGTTGCACAAG+AGG | + | chr7.1:5476150-5476169 | MS.gene06961:CDS | 40.0% | |
GCAACAGTCCATGATTTCTT+GGG | + | chr7.1:5476211-5476230 | MS.gene06961:CDS | 40.0% | |
GTAAACCAAGGATTAACCAG+TGG | + | chr7.1:5475464-5475483 | MS.gene06961:CDS | 40.0% | |
GTCCATGATTTCTTGGGAAT+TGG | + | chr7.1:5476217-5476236 | MS.gene06961:CDS | 40.0% | |
GTGTGTGAGATATGCAACAA+GGG | + | chr7.1:5474699-5474718 | MS.gene06961:CDS | 40.0% | |
GTTCTTTGCCTAAGTTTCCA+TGG | - | chr7.1:5474774-5474793 | None:intergenic | 40.0% | |
TATGCAACAAGGGATTTCAG+AGG | + | chr7.1:5474709-5474728 | MS.gene06961:CDS | 40.0% | |
TCATCATCATCTTCCACATG+AGG | + | chr7.1:5476324-5476343 | MS.gene06961:CDS | 40.0% | |
TGTGTGTGAGATATGCAACA+AGG | + | chr7.1:5474698-5474717 | MS.gene06961:CDS | 40.0% | |
TTCTTCTCCATTGTTTCCTG+AGG | - | chr7.1:5473680-5473699 | None:intergenic | 40.0% | |
TTGGAGCATGTTCTTGAGTT+GGG | - | chr7.1:5475610-5475629 | None:intergenic | 40.0% | |
! | AAGATGGAGGCAAGGTTTTT+GGG | - | chr7.1:5475703-5475722 | None:intergenic | 40.0% |
! | GGGGATCTTAGTGAGTTTTT+AGG | - | chr7.1:5475590-5475609 | None:intergenic | 40.0% |
! | TTCGGTGTAACTGAAGATTC+TGG | - | chr7.1:5474737-5474756 | None:intergenic | 40.0% |
!! | ATTTGGCTTTGCAAGTTTGG+TGG | - | chr7.1:5475494-5475513 | None:intergenic | 40.0% |
!! | GTGTTGGAAACAGGTTTTAG+CGG | - | chr7.1:5475539-5475558 | None:intergenic | 40.0% |
!! | TGCATTTGGCTTTGCAAGTT+TGG | - | chr7.1:5475497-5475516 | None:intergenic | 40.0% |
!! | TGGAAGCATTAAGTCAACAG+AGG | + | chr7.1:5476281-5476300 | MS.gene06961:CDS | 40.0% |
!!! | GTTCATAAGAGGGTTGGTTT+TGG | - | chr7.1:5475961-5475980 | None:intergenic | 40.0% |
AAGGCTCACCAGAAAACATG+TGG | + | chr7.1:5474972-5474991 | MS.gene06961:CDS | 45.0% | |
AATGCAACCACTTCAGCAGT+AGG | - | chr7.1:5474645-5474664 | None:intergenic | 45.0% | |
AGCTTCTCCTCAGGAAACAA+TGG | + | chr7.1:5473670-5473689 | MS.gene06961:CDS | 45.0% | |
ATCGCCGTGTGAAAATAAGG+CGG | - | chr7.1:5475065-5475084 | None:intergenic | 45.0% | |
ATGCATCACAGAATGCTCTG+TGG | - | chr7.1:5475424-5475443 | None:intergenic | 45.0% | |
CGCTGTTCAATCAGATTGGA+AGG | + | chr7.1:5474953-5474972 | MS.gene06961:CDS | 45.0% | |
GAAGAGGTCACAATCTTCCA+TGG | + | chr7.1:5474754-5474773 | MS.gene06961:CDS | 45.0% | |
GAATATTTGCCTGGAGTTCC+AGG | - | chr7.1:5473820-5473839 | None:intergenic | 45.0% | |
GCAAACATGGCGAGAAGAAA+TGG | + | chr7.1:5474904-5474923 | MS.gene06961:CDS | 45.0% | |
GGATTGTGGTGAACACATGA+TGG | - | chr7.1:5474837-5474856 | None:intergenic | 45.0% | |
GGCAACAGTCCATGATTTCT+TGG | + | chr7.1:5476210-5476229 | MS.gene06961:CDS | 45.0% | |
GTTGGAGCATGTTCTTGAGT+TGG | - | chr7.1:5475611-5475630 | None:intergenic | 45.0% | |
TCAACCAACAATGCATGTGG+TGG | + | chr7.1:5475641-5475660 | MS.gene06961:CDS | 45.0% | |
TCCACATGAGGATTCAGCAA+TGG | + | chr7.1:5476336-5476355 | MS.gene06961:CDS | 45.0% | |
TCCATTGCTGAATCCTCATG+TGG | - | chr7.1:5476340-5476359 | None:intergenic | 45.0% | |
TGAACCACCGCAACAAAGAT+TGG | + | chr7.1:5476261-5476280 | MS.gene06961:CDS | 45.0% | |
TGAAGGGTTGAAGAAGATGG+AGG | - | chr7.1:5475716-5475735 | None:intergenic | 45.0% | |
TGCATCACAGAATGCTCTGT+GGG | - | chr7.1:5475423-5475442 | None:intergenic | 45.0% | |
TTTAGCGGCATGGTAGAGAT+AGG | - | chr7.1:5475524-5475543 | None:intergenic | 45.0% | |
! | ACTAGTGCAGGTGCACTTTT+TGG | + | chr7.1:5475674-5475693 | MS.gene06961:CDS | 45.0% |
! | AGTGGAACCATTGCTATTGC+AGG | - | chr7.1:5473764-5473783 | None:intergenic | 45.0% |
! | CCCTAGTACCACATGTTTTC+TGG | - | chr7.1:5474983-5475002 | None:intergenic | 45.0% |
! | GAAGATGGAGGCAAGGTTTT+TGG | - | chr7.1:5475704-5475723 | None:intergenic | 45.0% |
! | GTGCTACTGCAAGCAATAGT+GGG | + | chr7.1:5475852-5475871 | MS.gene06961:CDS | 45.0% |
! | TCTAACATGGCTGGTGTTAG+TGG | + | chr7.1:5476007-5476026 | MS.gene06961:CDS | 45.0% |
! | TGGAGCATGTTCTTGAGTTG+GGG | - | chr7.1:5475609-5475628 | None:intergenic | 45.0% |
!! | TCTGAGGAAGTGTTGGAAAC+AGG | - | chr7.1:5475548-5475567 | None:intergenic | 45.0% |
AGAAACCTTCCTGGAACTCC+AGG | + | chr7.1:5473808-5473827 | MS.gene06961:CDS | 50.0% | |
ATTTGCCTGGAGTTCCAGGA+AGG | - | chr7.1:5473816-5473835 | None:intergenic | 50.0% | |
CACAATCCAGCTCGTGCATT+AGG | + | chr7.1:5474849-5474868 | MS.gene06961:CDS | 50.0% | |
CATGCCACCACATGCATTGT+TGG | - | chr7.1:5475648-5475667 | None:intergenic | 50.0% | |
CGTGCATTAGGTGACCTTAC+TGG | + | chr7.1:5474861-5474880 | MS.gene06961:CDS | 50.0% | |
CTAATGCACGAGCTGGATTG+TGG | - | chr7.1:5474851-5474870 | None:intergenic | 50.0% | |
GACTCAAGTTCAGGTCCATC+TGG | + | chr7.1:5473736-5473755 | MS.gene06961:CDS | 50.0% | |
GATGAAGGAAGCTTCTCCTC+AGG | + | chr7.1:5473661-5473680 | MS.gene06961:CDS | 50.0% | |
GCTTCCAATCTTTGTTGCGG+TGG | - | chr7.1:5476268-5476287 | None:intergenic | 50.0% | |
GGCATGTTCTCAACTAGTGC+AGG | + | chr7.1:5475662-5475681 | MS.gene06961:CDS | 50.0% | |
GGTGAACACATGATGGCTCA+GGG | - | chr7.1:5474830-5474849 | None:intergenic | 50.0% | |
GGTTGAAGAAGATGGAGGCA+AGG | - | chr7.1:5475711-5475730 | None:intergenic | 50.0% | |
TCTGGTGCCTGCAATAGCAA+TGG | + | chr7.1:5473754-5473773 | MS.gene06961:CDS | 50.0% | |
TGCTGGCATGGCTCAAATGT+CGG | + | chr7.1:5475796-5475815 | MS.gene06961:CDS | 50.0% | |
TGGAGGACTAATTGCTGGCA+TGG | + | chr7.1:5475784-5475803 | MS.gene06961:CDS | 50.0% | |
TGGTGAACACATGATGGCTC+AGG | - | chr7.1:5474831-5474850 | None:intergenic | 50.0% | |
! | AACATGGCTGGTGTTAGTGG+TGG | + | chr7.1:5476010-5476029 | MS.gene06961:CDS | 50.0% |
! | GCATGCCACTGGTTAATCCT+TGG | - | chr7.1:5475472-5475491 | None:intergenic | 50.0% |
! | TGGCAAGGCACTCCGATTAA+TGG | + | chr7.1:5474596-5474615 | MS.gene06961:intron | 50.0% |
! | TTGCTATTGCAGGCACCAGA+TGG | - | chr7.1:5473754-5473773 | None:intergenic | 50.0% |
!! | AGTGCAGGTGCACTTTTTGG+TGG | + | chr7.1:5475677-5475696 | MS.gene06961:CDS | 50.0% |
!! | GGAAACAGGTTTTAGCGGCA+TGG | - | chr7.1:5475534-5475553 | None:intergenic | 50.0% |
!! | GGTGCTACTGCAAGCAATAG+TGG | + | chr7.1:5475851-5475870 | MS.gene06961:CDS | 50.0% |
AGGTCACCTAATGCACGAGC+TGG | - | chr7.1:5474858-5474877 | None:intergenic | 55.0% | |
! | ATGGCTGGTGTTAGTGGTGG+AGG | + | chr7.1:5476013-5476032 | MS.gene06961:CDS | 55.0% |
! | CAAGTTTGGTGGCATGCCAC+TGG | - | chr7.1:5475483-5475502 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 5473643 | 5476381 | 5473643 | ID=MS.gene06961 |
chr7.1 | mRNA | 5473643 | 5476381 | 5473643 | ID=MS.gene06961.t1;Parent=MS.gene06961 |
chr7.1 | exon | 5473643 | 5473853 | 5473643 | ID=MS.gene06961.t1.exon1;Parent=MS.gene06961.t1 |
chr7.1 | CDS | 5473643 | 5473853 | 5473643 | ID=cds.MS.gene06961.t1;Parent=MS.gene06961.t1 |
chr7.1 | exon | 5474640 | 5475036 | 5474640 | ID=MS.gene06961.t1.exon2;Parent=MS.gene06961.t1 |
chr7.1 | CDS | 5474640 | 5475036 | 5474640 | ID=cds.MS.gene06961.t1;Parent=MS.gene06961.t1 |
chr7.1 | exon | 5475403 | 5476381 | 5475403 | ID=MS.gene06961.t1.exon3;Parent=MS.gene06961.t1 |
chr7.1 | CDS | 5475403 | 5476381 | 5475403 | ID=cds.MS.gene06961.t1;Parent=MS.gene06961.t1 |
Gene Sequence |
Protein sequence |